AutoCloner

Multiple sequence alignment - TraesCS2D01G156300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2D01G156300	chr2D	100.000	2612	0	0	1	2612	99682359	99684970	0.000000e+00	4824.0
1	TraesCS2D01G156300	chr2D	87.728	823	82	12	948	1757	99703562	99704378	0.000000e+00	942.0
2	TraesCS2D01G156300	chr2D	83.128	243	28	8	1550	1781	99720800	99721040	2.630000e-50	209.0
3	TraesCS2D01G156300	chr3D	95.119	840	22	9	1780	2612	560196906	560196079	0.000000e+00	1306.0
4	TraesCS2D01G156300	chr3D	88.073	109	10	2	180	286	170547049	170546942	2.730000e-25	126.0
5	TraesCS2D01G156300	chr2A	88.538	951	85	12	843	1781	98907812	98908750	0.000000e+00	1131.0
6	TraesCS2D01G156300	chr2A	87.046	826	85	15	948	1757	98903013	98903832	0.000000e+00	913.0
7	TraesCS2D01G156300	chr2A	90.210	572	30	6	505	1063	98896761	98897319	0.000000e+00	723.0
8	TraesCS2D01G156300	chr2A	85.662	551	74	4	1063	1612	19913989	19914535	2.250000e-160	575.0
9	TraesCS2D01G156300	chr2A	84.239	552	77	6	1067	1617	98578829	98579371	1.780000e-146	529.0
10	TraesCS2D01G156300	chr2A	91.731	387	23	3	1773	2152	772850223	772850607	1.780000e-146	529.0
11	TraesCS2D01G156300	chr2A	85.455	495	30	14	1	475	98896165	98896637	6.540000e-131	477.0
12	TraesCS2D01G156300	chr2A	90.751	173	15	1	1608	1780	98898072	98898243	2.020000e-56	230.0
13	TraesCS2D01G156300	chr2A	83.553	152	13	5	139	279	568285921	568285771	5.870000e-27	132.0
14	TraesCS2D01G156300	chr2B	88.636	792	64	16	977	1757	150948616	150947840	0.000000e+00	941.0
15	TraesCS2D01G156300	chr2B	90.831	698	30	16	509	1177	150985922	150985230	0.000000e+00	904.0
16	TraesCS2D01G156300	chr2B	95.741	540	21	2	1249	1788	150985236	150984699	0.000000e+00	869.0
17	TraesCS2D01G156300	chr2B	93.249	474	19	6	1	469	150986521	150986056	0.000000e+00	686.0
18	TraesCS2D01G156300	chr2B	84.502	542	76	5	1077	1617	151485752	151485218	1.780000e-146	529.0
19	TraesCS2D01G156300	chr1B	94.472	597	26	1	1781	2370	559137304	559136708	0.000000e+00	913.0
20	TraesCS2D01G156300	chr1B	93.980	598	28	2	1781	2370	559144228	559143631	0.000000e+00	898.0
21	TraesCS2D01G156300	chr1B	93.970	597	29	1	1781	2370	559151152	559150556	0.000000e+00	896.0
22	TraesCS2D01G156300	chr1B	92.787	610	33	6	1770	2370	593475950	593475343	0.000000e+00	872.0
23	TraesCS2D01G156300	chr1B	94.247	365	13	2	1780	2137	562712194	562712557	3.800000e-153	551.0
24	TraesCS2D01G156300	chr1B	95.133	226	9	1	2387	2612	582548205	582547982	3.200000e-94	355.0
25	TraesCS2D01G156300	chr1B	92.157	51	4	0	139	189	239780289	239780239	3.610000e-09	73.1
26	TraesCS2D01G156300	chr3B	92.599	608	34	8	1771	2370	732048667	732049271	0.000000e+00	863.0
27	TraesCS2D01G156300	chr3B	83.851	161	11	6	139	285	396272031	396271872	3.510000e-29	139.0
28	TraesCS2D01G156300	chr7A	92.605	595	32	4	1780	2367	106812591	106813180	0.000000e+00	845.0
29	TraesCS2D01G156300	chrUn	86.154	520	68	4	1095	1612	24377304	24376787	2.270000e-155	558.0
30	TraesCS2D01G156300	chr5A	95.570	316	14	0	2055	2370	54755625	54755940	8.340000e-140	507.0
31	TraesCS2D01G156300	chr5A	92.157	102	5	2	180	279	382070064	382069964	9.750000e-30	141.0
32	TraesCS2D01G156300	chr5A	79.375	160	15	10	139	282	464575956	464576113	2.140000e-16	97.1
33	TraesCS2D01G156300	chr5A	81.203	133	11	9	139	259	476661479	476661609	7.700000e-16	95.3
34	TraesCS2D01G156300	chr6B	90.252	318	18	3	2055	2370	81865874	81865568	1.130000e-108	403.0
35	TraesCS2D01G156300	chr1D	94.690	226	10	1	2387	2612	431430313	431430090	1.490000e-92	350.0
36	TraesCS2D01G156300	chr1A	94.248	226	11	1	2387	2612	529668631	529668408	6.920000e-91	344.0
37	TraesCS2D01G156300	chr1A	85.417	144	15	4	142	280	440793194	440793052	7.530000e-31	145.0
38	TraesCS2D01G156300	chr4A	84.416	154	11	4	138	279	690411442	690411290	3.510000e-29	139.0
39	TraesCS2D01G156300	chr7D	89.524	105	9	1	180	282	152649369	152649265	5.870000e-27	132.0
40	TraesCS2D01G156300	chr6D	81.757	148	20	3	137	282	289354030	289353888	1.640000e-22	117.0
41	TraesCS2D01G156300	chr5D	78.659	164	21	4	132	282	363325643	363325805	2.140000e-16	97.1
42	TraesCS2D01G156300	chr5B	77.439	164	23	11	132	282	429789898	429790060	4.630000e-13	86.1

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2D01G156300	chr2D	99682359	99684970	2611	False	4824.000000	4824	100.000000	1	2612	1	chr2D.!!$F1	2611
1	TraesCS2D01G156300	chr2D	99703562	99704378	816	False	942.000000	942	87.728000	948	1757	1	chr2D.!!$F2	809
2	TraesCS2D01G156300	chr3D	560196079	560196906	827	True	1306.000000	1306	95.119000	1780	2612	1	chr3D.!!$R2	832
3	TraesCS2D01G156300	chr2A	98903013	98908750	5737	False	1022.000000	1131	87.792000	843	1781	2	chr2A.!!$F5	938
4	TraesCS2D01G156300	chr2A	19913989	19914535	546	False	575.000000	575	85.662000	1063	1612	1	chr2A.!!$F1	549
5	TraesCS2D01G156300	chr2A	98578829	98579371	542	False	529.000000	529	84.239000	1067	1617	1	chr2A.!!$F2	550
6	TraesCS2D01G156300	chr2A	98896165	98898243	2078	False	476.666667	723	88.805333	1	1780	3	chr2A.!!$F4	1779
7	TraesCS2D01G156300	chr2B	150947840	150948616	776	True	941.000000	941	88.636000	977	1757	1	chr2B.!!$R1	780
8	TraesCS2D01G156300	chr2B	150984699	150986521	1822	True	819.666667	904	93.273667	1	1788	3	chr2B.!!$R3	1787
9	TraesCS2D01G156300	chr2B	151485218	151485752	534	True	529.000000	529	84.502000	1077	1617	1	chr2B.!!$R2	540
10	TraesCS2D01G156300	chr1B	559136708	559137304	596	True	913.000000	913	94.472000	1781	2370	1	chr1B.!!$R2	589
11	TraesCS2D01G156300	chr1B	559143631	559144228	597	True	898.000000	898	93.980000	1781	2370	1	chr1B.!!$R3	589
12	TraesCS2D01G156300	chr1B	559150556	559151152	596	True	896.000000	896	93.970000	1781	2370	1	chr1B.!!$R4	589
13	TraesCS2D01G156300	chr1B	593475343	593475950	607	True	872.000000	872	92.787000	1770	2370	1	chr1B.!!$R6	600
14	TraesCS2D01G156300	chr3B	732048667	732049271	604	False	863.000000	863	92.599000	1771	2370	1	chr3B.!!$F1	599
15	TraesCS2D01G156300	chr7A	106812591	106813180	589	False	845.000000	845	92.605000	1780	2367	1	chr7A.!!$F1	587
16	TraesCS2D01G156300	chrUn	24376787	24377304	517	True	558.000000	558	86.154000	1095	1612	1	chrUn.!!$R1	517

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
876	4831	0.469917	AGTATGGTGGCGATTCCTGG	59.53	55.0	0.0	0.0	35.26	4.45	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2216	6981	0.392461	TCCCTCCATCCGAAAAAGCG	60.392	55.0	0.0	0.0	0.0	4.68	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
21	22	1.421268	TGAGAGGTGGTTTGAGCATGT	59.579	47.619	0.00	0.00	0.00	3.21
81	82	3.604129	ATGGACGCATGTGACGCCA	62.604	57.895	14.43	16.47	39.67	5.69
83	84	3.490759	GACGCATGTGACGCCAGG	61.491	66.667	14.43	0.00	0.00	4.45
147	150	3.266254	AGGCCTTAAAAACTACTCCCTCC	59.734	47.826	0.00	0.00	0.00	4.30
209	223	6.455360	ACTGAAATGAGTGAACAAACACAT	57.545	33.333	0.00	0.00	42.45	3.21
282	302	1.542915	TGTGAACGGAGGCAGTACTAC	59.457	52.381	0.00	0.00	0.00	2.73
284	304	2.230750	GTGAACGGAGGCAGTACTACTT	59.769	50.000	0.00	0.00	0.00	2.24
285	305	3.441572	GTGAACGGAGGCAGTACTACTTA	59.558	47.826	0.00	0.00	0.00	2.24
286	306	4.081406	TGAACGGAGGCAGTACTACTTAA	58.919	43.478	0.00	0.00	0.00	1.85
287	307	4.157289	TGAACGGAGGCAGTACTACTTAAG	59.843	45.833	0.00	0.00	0.00	1.85
301	321	3.449746	ACTTAAGTTGCCATGGCCTTA	57.550	42.857	33.44	27.81	41.09	2.69
302	322	3.773560	ACTTAAGTTGCCATGGCCTTAA	58.226	40.909	30.34	30.34	41.09	1.85
303	323	4.156477	ACTTAAGTTGCCATGGCCTTAAA	58.844	39.130	31.14	20.86	41.09	1.52
304	324	4.591072	ACTTAAGTTGCCATGGCCTTAAAA	59.409	37.500	31.14	20.56	41.09	1.52
305	325	5.071115	ACTTAAGTTGCCATGGCCTTAAAAA	59.929	36.000	31.14	19.99	41.09	1.94
306	326	3.401033	AGTTGCCATGGCCTTAAAAAC	57.599	42.857	33.44	26.75	41.09	2.43
470	503	1.084289	GCATCGGCCTAAAAGAACGT	58.916	50.000	0.00	0.00	0.00	3.99
475	508	4.191033	TCGGCCTAAAAGAACGTTGATA	57.809	40.909	5.00	0.00	0.00	2.15
492	525	6.570690	GTTGATACGAGGTTGTGTATCTTC	57.429	41.667	12.11	3.91	44.59	2.87
494	527	6.525578	TGATACGAGGTTGTGTATCTTCTT	57.474	37.500	12.11	0.00	44.59	2.52
497	530	8.692710	TGATACGAGGTTGTGTATCTTCTTTAT	58.307	33.333	12.11	0.00	44.59	1.40
499	532	6.034591	ACGAGGTTGTGTATCTTCTTTATCG	58.965	40.000	0.00	0.00	0.00	2.92
503	536	7.036220	AGGTTGTGTATCTTCTTTATCGTCAG	58.964	38.462	0.00	0.00	0.00	3.51
507	635	6.476706	TGTGTATCTTCTTTATCGTCAGCATG	59.523	38.462	0.00	0.00	37.54	4.06
651	787	6.775594	AAAACAGAGTAGAAAGCAAAAGGT	57.224	33.333	0.00	0.00	0.00	3.50
703	839	5.708697	GCACATTAAGTAGGGTGTTTAGGTT	59.291	40.000	0.00	0.00	33.88	3.50
735	871	7.010275	CGATAATGAGATCATGCCAAGACATAG	59.990	40.741	0.00	0.00	36.56	2.23
769	905	2.228103	AGTTTGTGTAGCGTCGATCTGA	59.772	45.455	0.00	0.00	0.00	3.27
862	2533	4.380867	GGCCACTGAATCAAACCAAGTATG	60.381	45.833	0.00	0.00	0.00	2.39
876	4831	0.469917	AGTATGGTGGCGATTCCTGG	59.530	55.000	0.00	0.00	35.26	4.45
904	4870	1.109920	TAGCATGCTCGAGTCCCTCC	61.110	60.000	26.57	0.00	0.00	4.30
907	4873	1.760086	ATGCTCGAGTCCCTCCCAG	60.760	63.158	15.13	0.00	0.00	4.45
916	4882	1.461268	TCCCTCCCAGCACAACAGA	60.461	57.895	0.00	0.00	0.00	3.41
936	4920	4.155826	CAGAAACAAGAACACAAGGTCACA	59.844	41.667	0.00	0.00	0.00	3.58
1004	4989	2.071540	CTCAGCGAGAGTTGCAATGAA	58.928	47.619	0.59	0.00	42.52	2.57
1188	5251	1.022451	ACAACGGCGTCAACAACACT	61.022	50.000	15.17	0.00	0.00	3.55
1745	6499	3.680937	GGCATGTGGATTTTGTGTCATTG	59.319	43.478	0.00	0.00	0.00	2.82
1748	6502	4.582701	TGTGGATTTTGTGTCATTGGTC	57.417	40.909	0.00	0.00	0.00	4.02
1850	6604	8.293157	AGCAAGAACTAAAAGAGATTACTTTGC	58.707	33.333	0.00	0.00	39.57	3.68
2082	6847	8.471361	ACATGATAATATAGAGCATTGTGTCG	57.529	34.615	0.00	0.00	0.00	4.35
2216	6981	6.238484	GCTACATACATTCATTTGAGGGACAC	60.238	42.308	0.00	0.00	0.00	3.67
2297	7062	6.529125	ACAGTCGGTCAGTAAATAATAACACG	59.471	38.462	0.00	0.00	0.00	4.49
2413	7178	2.355513	CCAAGAGGACCATCTGTTCCTG	60.356	54.545	0.45	0.00	36.89	3.86
2439	7204	2.060326	TAGCAGTCGACAAAAGACGG	57.940	50.000	19.50	0.00	42.97	4.79
2442	7207	1.860676	CAGTCGACAAAAGACGGGAA	58.139	50.000	19.50	0.00	42.97	3.97
2443	7208	2.413837	CAGTCGACAAAAGACGGGAAT	58.586	47.619	19.50	0.00	42.97	3.01
2477	7242	1.346395	ACTCTGTTGCCACATCCGTAA	59.654	47.619	0.00	0.00	30.39	3.18
2553	7318	6.643770	CACAATTCTTCAGGAAAGGTTGATTG	59.356	38.462	9.30	0.00	37.49	2.67
2602	7367	5.895807	TCCTAGTGTTCTTAGACCTGGTAA	58.104	41.667	0.00	0.00	0.00	2.85

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
81	82	4.803329	AGCCAACAATATTCTGATCCCT	57.197	40.909	0.00	0.00	0.00	4.20
83	84	4.646492	ACCAAGCCAACAATATTCTGATCC	59.354	41.667	0.00	0.00	0.00	3.36
239	253	9.498307	CACAAACATAAGACGTTCTAACTTTTT	57.502	29.630	0.00	0.00	0.00	1.94
252	268	3.120304	GCCTCCGTTCACAAACATAAGAC	60.120	47.826	0.00	0.00	34.93	3.01
259	275	1.529865	GTACTGCCTCCGTTCACAAAC	59.470	52.381	0.00	0.00	0.00	2.93
282	302	4.799564	TTTAAGGCCATGGCAACTTAAG	57.200	40.909	36.56	0.00	44.11	1.85
284	304	4.591072	AGTTTTTAAGGCCATGGCAACTTA	59.409	37.500	36.56	29.27	44.11	2.24
285	305	3.390967	AGTTTTTAAGGCCATGGCAACTT	59.609	39.130	36.56	30.26	44.11	2.66
286	306	2.972021	AGTTTTTAAGGCCATGGCAACT	59.028	40.909	36.56	29.84	44.11	3.16
287	307	3.401033	AGTTTTTAAGGCCATGGCAAC	57.599	42.857	36.56	28.27	44.11	4.17
302	322	9.717942	TGCATGGCAAATTAAATAAGTAGTTTT	57.282	25.926	0.00	0.00	34.76	2.43
303	323	9.889128	ATGCATGGCAAATTAAATAAGTAGTTT	57.111	25.926	0.00	0.00	43.62	2.66
304	324	9.889128	AATGCATGGCAAATTAAATAAGTAGTT	57.111	25.926	0.00	0.00	43.62	2.24
305	325	9.316730	CAATGCATGGCAAATTAAATAAGTAGT	57.683	29.630	0.00	0.00	43.62	2.73
306	326	9.316730	ACAATGCATGGCAAATTAAATAAGTAG	57.683	29.630	0.00	0.00	43.62	2.57
381	411	9.555727	GCAGGAACAAAGGATATATAAGTTACA	57.444	33.333	0.00	0.00	0.00	2.41
387	417	9.959721	GATTAGGCAGGAACAAAGGATATATAA	57.040	33.333	0.00	0.00	0.00	0.98
470	503	6.525578	AGAAGATACACAACCTCGTATCAA	57.474	37.500	11.05	0.00	44.21	2.57
475	508	6.034591	CGATAAAGAAGATACACAACCTCGT	58.965	40.000	0.00	0.00	0.00	4.18
477	510	7.033791	TGACGATAAAGAAGATACACAACCTC	58.966	38.462	0.00	0.00	0.00	3.85
479	512	6.237861	GCTGACGATAAAGAAGATACACAACC	60.238	42.308	0.00	0.00	0.00	3.77
482	515	5.961272	TGCTGACGATAAAGAAGATACACA	58.039	37.500	0.00	0.00	0.00	3.72
483	516	6.477033	ACATGCTGACGATAAAGAAGATACAC	59.523	38.462	0.00	0.00	0.00	2.90
484	517	6.476706	CACATGCTGACGATAAAGAAGATACA	59.523	38.462	0.00	0.00	0.00	2.29
485	518	6.563010	GCACATGCTGACGATAAAGAAGATAC	60.563	42.308	0.00	0.00	38.21	2.24
486	519	5.463392	GCACATGCTGACGATAAAGAAGATA	59.537	40.000	0.00	0.00	38.21	1.98
487	520	4.272018	GCACATGCTGACGATAAAGAAGAT	59.728	41.667	0.00	0.00	38.21	2.40
488	521	3.618594	GCACATGCTGACGATAAAGAAGA	59.381	43.478	0.00	0.00	38.21	2.87
489	522	3.371898	TGCACATGCTGACGATAAAGAAG	59.628	43.478	5.31	0.00	42.66	2.85
492	525	2.931969	TCTGCACATGCTGACGATAAAG	59.068	45.455	9.14	0.00	42.71	1.85
494	527	2.166254	TCTCTGCACATGCTGACGATAA	59.834	45.455	9.14	0.00	42.71	1.75
497	530	0.389037	GTCTCTGCACATGCTGACGA	60.389	55.000	9.14	8.47	42.71	4.20
499	532	1.077123	CAGTCTCTGCACATGCTGAC	58.923	55.000	9.14	11.64	42.71	3.51
503	536	0.107312	ATCCCAGTCTCTGCACATGC	60.107	55.000	0.00	0.00	42.50	4.06
507	635	3.935828	GAGTTTAATCCCAGTCTCTGCAC	59.064	47.826	0.00	0.00	0.00	4.57
703	839	4.393990	GGCATGATCTCATTATCGCATTGA	59.606	41.667	0.00	0.00	33.61	2.57
735	871	6.294363	GCTACACAAACTTACGACACAATAC	58.706	40.000	0.00	0.00	0.00	1.89
769	905	3.238597	TCCTTATTTTTGTTGCAGCCCT	58.761	40.909	0.00	0.00	0.00	5.19
862	2533	0.759346	ATAGACCAGGAATCGCCACC	59.241	55.000	0.00	0.00	40.02	4.61
876	4831	5.802956	GGACTCGAGCATGCTATTTATAGAC	59.197	44.000	22.74	11.30	32.05	2.59
904	4870	3.119531	TGTTCTTGTTTCTGTTGTGCTGG	60.120	43.478	0.00	0.00	0.00	4.85
907	4873	3.832276	TGTGTTCTTGTTTCTGTTGTGC	58.168	40.909	0.00	0.00	0.00	4.57
916	4882	4.618227	GCTTGTGACCTTGTGTTCTTGTTT	60.618	41.667	0.00	0.00	0.00	2.83
936	4920	1.067821	GCAGTATCGAGGTAGCAGCTT	59.932	52.381	0.00	0.00	0.00	3.74
1004	4989	1.980772	GCTGGGGCTTGCATTGTCT	60.981	57.895	0.00	0.00	35.22	3.41
1212	5275	4.003788	AGGTCCGTCGGCTTGGTG	62.004	66.667	6.34	0.00	0.00	4.17
1653	6401	2.705658	TCCTTGATCCTTATCGGCACAT	59.294	45.455	0.00	0.00	34.60	3.21
1745	6499	1.084289	GTGGGCGTGAAACATAGACC	58.916	55.000	0.00	0.00	35.74	3.85
1748	6502	2.416547	CTCTTGTGGGCGTGAAACATAG	59.583	50.000	0.00	0.00	35.74	2.23
1813	6567	9.651913	TCTTTTAGTTCTTGCTTCAAATTTGTT	57.348	25.926	17.47	0.00	0.00	2.83
1850	6604	2.074547	TCGTCCGCTACCAAGAAAAG	57.925	50.000	0.00	0.00	0.00	2.27
1855	6611	0.999406	CAACATCGTCCGCTACCAAG	59.001	55.000	0.00	0.00	0.00	3.61
2216	6981	0.392461	TCCCTCCATCCGAAAAAGCG	60.392	55.000	0.00	0.00	0.00	4.68
2297	7062	4.563061	GGAAATATGCCTTTGATGCATCC	58.437	43.478	23.67	8.50	46.04	3.51
2439	7204	9.474920	CAACAGAGTTCTCAGAAGATATATTCC	57.525	37.037	6.47	0.00	0.00	3.01
2442	7207	7.070447	TGGCAACAGAGTTCTCAGAAGATATAT	59.930	37.037	2.64	0.00	46.17	0.86
2443	7208	6.381133	TGGCAACAGAGTTCTCAGAAGATATA	59.619	38.462	2.64	0.00	46.17	0.86
2477	7242	2.026449	AGAAGCAGCATAGCCAGAACTT	60.026	45.455	0.00	0.00	34.23	2.66
2553	7318	3.503748	ACTTCTGTCAAGTGGCAATTAGC	59.496	43.478	0.00	0.00	44.65	3.09

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.