Multiple sequence alignment - TraesCS2D01G153200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G153200 chr2D 100.000 3355 0 0 1 3355 95785684 95789038 0.000000e+00 6196.0
1 TraesCS2D01G153200 chr2D 95.194 2684 75 20 717 3355 96292645 96295319 0.000000e+00 4193.0
2 TraesCS2D01G153200 chr2D 95.468 2074 36 21 722 2750 96083197 96085257 0.000000e+00 3256.0
3 TraesCS2D01G153200 chr2D 95.262 1562 38 11 1217 2750 95917197 95918750 0.000000e+00 2442.0
4 TraesCS2D01G153200 chr2D 93.976 581 25 3 2785 3355 96085477 96086057 0.000000e+00 870.0
5 TraesCS2D01G153200 chr2D 93.654 583 25 3 2785 3355 95918972 95919554 0.000000e+00 861.0
6 TraesCS2D01G153200 chr2D 96.593 499 15 2 1 498 446848714 446848217 0.000000e+00 826.0
7 TraesCS2D01G153200 chr2D 89.981 529 27 11 717 1227 95914899 95915419 0.000000e+00 660.0
8 TraesCS2D01G153200 chr2D 80.412 97 12 4 497 589 96081635 96081728 2.160000e-07 67.6
9 TraesCS2D01G153200 chr2D 100.000 32 0 0 2749 2780 96085419 96085450 3.610000e-05 60.2
10 TraesCS2D01G153200 chr2A 86.905 2039 154 44 713 2685 94317131 94319122 0.000000e+00 2182.0
11 TraesCS2D01G153200 chr2A 91.365 857 70 3 1572 2428 94447034 94447886 0.000000e+00 1170.0
12 TraesCS2D01G153200 chr2A 92.632 665 43 4 1986 2650 94324405 94325063 0.000000e+00 952.0
13 TraesCS2D01G153200 chr2A 84.390 410 37 9 715 1105 94323793 94324194 8.790000e-101 377.0
14 TraesCS2D01G153200 chr2A 83.636 330 51 3 3027 3355 94320679 94321006 1.170000e-79 307.0
15 TraesCS2D01G153200 chr2A 90.000 230 20 2 2459 2687 94447882 94448109 9.100000e-76 294.0
16 TraesCS2D01G153200 chr2A 81.763 329 36 13 3028 3355 94449628 94449933 1.540000e-63 254.0
17 TraesCS2D01G153200 chr2A 82.500 240 17 8 2686 2901 94449400 94449638 1.590000e-43 187.0
18 TraesCS2D01G153200 chr2A 81.513 238 23 7 1145 1367 94324189 94324420 3.440000e-40 176.0
19 TraesCS2D01G153200 chr2A 81.780 236 16 9 2686 2898 94319813 94320044 4.450000e-39 172.0
20 TraesCS2D01G153200 chr2A 89.815 108 11 0 2921 3028 14824611 14824718 4.510000e-29 139.0
21 TraesCS2D01G153200 chr2A 88.393 112 11 2 2920 3030 216837798 216837908 2.100000e-27 134.0
22 TraesCS2D01G153200 chr2A 92.000 75 5 1 713 786 94419441 94419515 1.650000e-18 104.0
23 TraesCS2D01G153200 chrUn 90.711 1012 74 13 1562 2568 17383308 17384304 0.000000e+00 1330.0
24 TraesCS2D01G153200 chrUn 89.209 834 46 17 715 1506 17382368 17383199 0.000000e+00 1002.0
25 TraesCS2D01G153200 chrUn 99.265 408 2 1 2141 2548 477994025 477993619 0.000000e+00 736.0
26 TraesCS2D01G153200 chr7D 96.600 500 14 3 1 498 71554158 71553660 0.000000e+00 826.0
27 TraesCS2D01G153200 chr1D 96.364 495 16 2 1 494 100810123 100809630 0.000000e+00 813.0
28 TraesCS2D01G153200 chr1D 92.786 499 33 3 1 498 128520528 128521024 0.000000e+00 719.0
29 TraesCS2D01G153200 chr1D 86.207 116 15 1 2916 3031 8956905 8957019 1.260000e-24 124.0
30 TraesCS2D01G153200 chr3D 96.694 484 13 3 20 501 120867084 120867566 0.000000e+00 802.0
31 TraesCS2D01G153200 chr3D 87.288 118 12 3 2910 3027 185070503 185070389 7.550000e-27 132.0
32 TraesCS2D01G153200 chr3D 92.157 51 4 0 1460 1510 419464186 419464236 4.640000e-09 73.1
33 TraesCS2D01G153200 chr6B 92.231 502 35 3 1 499 279570879 279570379 0.000000e+00 708.0
34 TraesCS2D01G153200 chr6B 74.919 307 60 14 1577 1873 679566753 679566454 1.260000e-24 124.0
35 TraesCS2D01G153200 chr1B 91.600 500 38 3 1 498 329933381 329933878 0.000000e+00 688.0
36 TraesCS2D01G153200 chr5B 91.400 500 40 3 1 498 690709609 690709111 0.000000e+00 682.0
37 TraesCS2D01G153200 chr4B 90.303 495 45 3 1 494 281605262 281604770 0.000000e+00 645.0
38 TraesCS2D01G153200 chr5D 88.991 109 12 0 2919 3027 386689203 386689095 5.840000e-28 135.0
39 TraesCS2D01G153200 chr4A 85.950 121 12 3 2904 3019 41036358 41036478 1.260000e-24 124.0
40 TraesCS2D01G153200 chr6D 76.042 192 39 5 1576 1762 409872561 409872750 3.560000e-15 93.5
41 TraesCS2D01G153200 chr7B 76.471 170 34 5 1654 1820 535614669 535614835 1.660000e-13 87.9
42 TraesCS2D01G153200 chr7A 80.734 109 19 2 1654 1761 574754198 574754305 2.150000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G153200 chr2D 95785684 95789038 3354 False 6196.000000 6196 100.000000 1 3355 1 chr2D.!!$F1 3354
1 TraesCS2D01G153200 chr2D 96292645 96295319 2674 False 4193.000000 4193 95.194000 717 3355 1 chr2D.!!$F2 2638
2 TraesCS2D01G153200 chr2D 95914899 95919554 4655 False 1321.000000 2442 92.965667 717 3355 3 chr2D.!!$F3 2638
3 TraesCS2D01G153200 chr2D 96081635 96086057 4422 False 1063.450000 3256 92.464000 497 3355 4 chr2D.!!$F4 2858
4 TraesCS2D01G153200 chr2A 94317131 94325063 7932 False 694.333333 2182 85.142667 713 3355 6 chr2A.!!$F4 2642
5 TraesCS2D01G153200 chr2A 94447034 94449933 2899 False 476.250000 1170 86.407000 1572 3355 4 chr2A.!!$F5 1783
6 TraesCS2D01G153200 chrUn 17382368 17384304 1936 False 1166.000000 1330 89.960000 715 2568 2 chrUn.!!$F1 1853
7 TraesCS2D01G153200 chr6B 279570379 279570879 500 True 708.000000 708 92.231000 1 499 1 chr6B.!!$R1 498

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
351 352 0.034477 CCATAGCGGAACTTGGGGTT 60.034 55.0 0.0 0.0 41.40 4.11 F
1247 4469 0.034767 TCTTCTCCGACGAGCCCTAA 60.035 55.0 0.0 0.0 35.94 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1903 5201 0.955919 GGTTTGGCTGAGTCCCTTCG 60.956 60.000 0.0 0.0 0.0 3.79 R
3092 8415 1.349026 CCCTCTTTCTCTCACCAAGCA 59.651 52.381 0.0 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 9.349713 ACTGTTAGGAATAAACTTGTGATTCAA 57.650 29.630 9.42 0.00 32.30 2.69
80 81 9.736023 GGAATAAACTTGTGATTCAACATATCC 57.264 33.333 9.42 0.00 32.30 2.59
81 82 9.736023 GAATAAACTTGTGATTCAACATATCCC 57.264 33.333 0.00 0.00 31.25 3.85
82 83 9.479549 AATAAACTTGTGATTCAACATATCCCT 57.520 29.630 0.00 0.00 32.18 4.20
83 84 7.396540 AAACTTGTGATTCAACATATCCCTC 57.603 36.000 0.00 0.00 32.18 4.30
84 85 6.319048 ACTTGTGATTCAACATATCCCTCT 57.681 37.500 0.00 0.00 32.18 3.69
85 86 6.725364 ACTTGTGATTCAACATATCCCTCTT 58.275 36.000 0.00 0.00 32.18 2.85
86 87 6.825721 ACTTGTGATTCAACATATCCCTCTTC 59.174 38.462 0.00 0.00 32.18 2.87
87 88 5.359756 TGTGATTCAACATATCCCTCTTCG 58.640 41.667 0.00 0.00 0.00 3.79
88 89 5.104941 TGTGATTCAACATATCCCTCTTCGT 60.105 40.000 0.00 0.00 0.00 3.85
89 90 5.463724 GTGATTCAACATATCCCTCTTCGTC 59.536 44.000 0.00 0.00 0.00 4.20
90 91 3.710326 TCAACATATCCCTCTTCGTCG 57.290 47.619 0.00 0.00 0.00 5.12
91 92 3.021695 TCAACATATCCCTCTTCGTCGT 58.978 45.455 0.00 0.00 0.00 4.34
92 93 3.116300 CAACATATCCCTCTTCGTCGTG 58.884 50.000 0.00 0.00 0.00 4.35
93 94 1.067212 ACATATCCCTCTTCGTCGTGC 59.933 52.381 0.00 0.00 0.00 5.34
94 95 1.338337 CATATCCCTCTTCGTCGTGCT 59.662 52.381 0.00 0.00 0.00 4.40
95 96 2.336945 TATCCCTCTTCGTCGTGCTA 57.663 50.000 0.00 0.00 0.00 3.49
96 97 0.739561 ATCCCTCTTCGTCGTGCTAC 59.260 55.000 0.00 0.00 0.00 3.58
97 98 0.322277 TCCCTCTTCGTCGTGCTACT 60.322 55.000 0.00 0.00 0.00 2.57
98 99 0.179161 CCCTCTTCGTCGTGCTACTG 60.179 60.000 0.00 0.00 0.00 2.74
99 100 0.803117 CCTCTTCGTCGTGCTACTGA 59.197 55.000 0.00 0.00 0.00 3.41
100 101 1.466024 CCTCTTCGTCGTGCTACTGAC 60.466 57.143 0.00 0.00 0.00 3.51
101 102 1.465387 CTCTTCGTCGTGCTACTGACT 59.535 52.381 0.00 0.00 32.93 3.41
102 103 1.878088 TCTTCGTCGTGCTACTGACTT 59.122 47.619 0.00 0.00 32.93 3.01
103 104 2.292569 TCTTCGTCGTGCTACTGACTTT 59.707 45.455 0.00 0.00 32.93 2.66
104 105 2.787601 TCGTCGTGCTACTGACTTTT 57.212 45.000 0.00 0.00 32.93 2.27
105 106 3.088194 TCGTCGTGCTACTGACTTTTT 57.912 42.857 0.00 0.00 32.93 1.94
106 107 2.792674 TCGTCGTGCTACTGACTTTTTG 59.207 45.455 0.00 0.00 32.93 2.44
107 108 2.538449 CGTCGTGCTACTGACTTTTTGT 59.462 45.455 0.00 0.00 32.93 2.83
108 109 3.000925 CGTCGTGCTACTGACTTTTTGTT 59.999 43.478 0.00 0.00 32.93 2.83
109 110 4.515432 GTCGTGCTACTGACTTTTTGTTC 58.485 43.478 0.00 0.00 32.37 3.18
110 111 4.033587 GTCGTGCTACTGACTTTTTGTTCA 59.966 41.667 0.00 0.00 32.37 3.18
111 112 4.632251 TCGTGCTACTGACTTTTTGTTCAA 59.368 37.500 0.00 0.00 0.00 2.69
112 113 5.122554 TCGTGCTACTGACTTTTTGTTCAAA 59.877 36.000 0.00 0.00 0.00 2.69
113 114 5.971202 CGTGCTACTGACTTTTTGTTCAAAT 59.029 36.000 0.00 0.00 0.00 2.32
114 115 6.075415 CGTGCTACTGACTTTTTGTTCAAATG 60.075 38.462 0.00 0.00 0.00 2.32
115 116 6.198966 GTGCTACTGACTTTTTGTTCAAATGG 59.801 38.462 0.00 0.00 0.00 3.16
116 117 6.127479 TGCTACTGACTTTTTGTTCAAATGGT 60.127 34.615 0.00 2.10 0.00 3.55
117 118 6.417930 GCTACTGACTTTTTGTTCAAATGGTC 59.582 38.462 16.28 16.28 32.48 4.02
118 119 6.530019 ACTGACTTTTTGTTCAAATGGTCT 57.470 33.333 20.02 8.42 32.79 3.85
119 120 6.332630 ACTGACTTTTTGTTCAAATGGTCTG 58.667 36.000 20.70 20.70 35.28 3.51
120 121 5.659463 TGACTTTTTGTTCAAATGGTCTGG 58.341 37.500 20.02 5.04 32.79 3.86
121 122 5.186797 TGACTTTTTGTTCAAATGGTCTGGT 59.813 36.000 20.02 7.02 32.79 4.00
122 123 6.048732 ACTTTTTGTTCAAATGGTCTGGTT 57.951 33.333 0.00 0.00 0.00 3.67
123 124 7.093727 TGACTTTTTGTTCAAATGGTCTGGTTA 60.094 33.333 20.02 7.57 32.79 2.85
124 125 7.039270 ACTTTTTGTTCAAATGGTCTGGTTAC 58.961 34.615 0.00 0.00 0.00 2.50
125 126 6.783708 TTTTGTTCAAATGGTCTGGTTACT 57.216 33.333 0.00 0.00 0.00 2.24
126 127 6.783708 TTTGTTCAAATGGTCTGGTTACTT 57.216 33.333 0.00 0.00 0.00 2.24
127 128 5.766150 TGTTCAAATGGTCTGGTTACTTG 57.234 39.130 0.00 0.00 0.00 3.16
128 129 4.037446 TGTTCAAATGGTCTGGTTACTTGC 59.963 41.667 0.00 0.00 0.00 4.01
129 130 3.826524 TCAAATGGTCTGGTTACTTGCA 58.173 40.909 0.00 0.00 0.00 4.08
130 131 3.820467 TCAAATGGTCTGGTTACTTGCAG 59.180 43.478 0.00 0.00 0.00 4.41
131 132 1.826385 ATGGTCTGGTTACTTGCAGC 58.174 50.000 0.00 0.00 0.00 5.25
132 133 0.764890 TGGTCTGGTTACTTGCAGCT 59.235 50.000 0.00 0.00 0.00 4.24
133 134 1.142870 TGGTCTGGTTACTTGCAGCTT 59.857 47.619 0.00 0.00 0.00 3.74
134 135 2.230660 GGTCTGGTTACTTGCAGCTTT 58.769 47.619 0.00 0.00 0.00 3.51
135 136 2.030805 GGTCTGGTTACTTGCAGCTTTG 60.031 50.000 0.00 0.00 0.00 2.77
136 137 2.030805 GTCTGGTTACTTGCAGCTTTGG 60.031 50.000 0.00 0.00 0.00 3.28
137 138 0.673437 TGGTTACTTGCAGCTTTGGC 59.327 50.000 0.00 0.00 39.06 4.52
138 139 0.387239 GGTTACTTGCAGCTTTGGCG 60.387 55.000 0.00 0.00 44.37 5.69
139 140 0.387239 GTTACTTGCAGCTTTGGCGG 60.387 55.000 0.00 0.00 44.37 6.13
146 147 4.715523 AGCTTTGGCGGCCGCTTA 62.716 61.111 45.23 32.62 44.37 3.09
147 148 4.179579 GCTTTGGCGGCCGCTTAG 62.180 66.667 45.23 36.03 41.60 2.18
148 149 4.179579 CTTTGGCGGCCGCTTAGC 62.180 66.667 45.23 30.71 41.60 3.09
157 158 4.530857 CCGCTTAGCCGTCCCAGG 62.531 72.222 0.00 0.00 0.00 4.45
158 159 4.530857 CGCTTAGCCGTCCCAGGG 62.531 72.222 0.00 0.00 0.00 4.45
159 160 3.081409 GCTTAGCCGTCCCAGGGA 61.081 66.667 3.01 3.01 0.00 4.20
160 161 3.095347 GCTTAGCCGTCCCAGGGAG 62.095 68.421 9.15 0.00 29.39 4.30
161 162 1.381327 CTTAGCCGTCCCAGGGAGA 60.381 63.158 9.15 0.00 29.39 3.71
162 163 1.381327 TTAGCCGTCCCAGGGAGAG 60.381 63.158 9.15 6.14 29.39 3.20
163 164 1.870941 TTAGCCGTCCCAGGGAGAGA 61.871 60.000 9.15 0.00 29.39 3.10
164 165 2.285889 TAGCCGTCCCAGGGAGAGAG 62.286 65.000 9.15 0.43 29.39 3.20
165 166 2.684104 CCGTCCCAGGGAGAGAGA 59.316 66.667 9.15 0.00 29.39 3.10
166 167 1.755008 CCGTCCCAGGGAGAGAGAC 60.755 68.421 9.15 0.00 29.39 3.36
167 168 2.115911 CGTCCCAGGGAGAGAGACG 61.116 68.421 9.15 4.32 43.52 4.18
168 169 2.043852 TCCCAGGGAGAGAGACGC 60.044 66.667 3.01 0.00 0.00 5.19
169 170 3.151022 CCCAGGGAGAGAGACGCC 61.151 72.222 0.00 0.00 37.74 5.68
170 171 2.363018 CCAGGGAGAGAGACGCCA 60.363 66.667 0.00 0.00 40.26 5.69
171 172 1.760086 CCAGGGAGAGAGACGCCAT 60.760 63.158 0.00 0.00 40.26 4.40
172 173 1.739049 CAGGGAGAGAGACGCCATC 59.261 63.158 0.00 0.00 40.26 3.51
173 174 1.039785 CAGGGAGAGAGACGCCATCA 61.040 60.000 0.00 0.00 40.26 3.07
174 175 1.040339 AGGGAGAGAGACGCCATCAC 61.040 60.000 0.00 0.00 40.26 3.06
175 176 1.439644 GGAGAGAGACGCCATCACC 59.560 63.158 0.00 0.00 38.35 4.02
176 177 1.040339 GGAGAGAGACGCCATCACCT 61.040 60.000 0.00 0.00 38.35 4.00
177 178 0.383949 GAGAGAGACGCCATCACCTC 59.616 60.000 0.00 0.00 32.46 3.85
178 179 1.040339 AGAGAGACGCCATCACCTCC 61.040 60.000 0.00 0.00 32.61 4.30
179 180 1.305297 AGAGACGCCATCACCTCCA 60.305 57.895 0.00 0.00 0.00 3.86
180 181 0.689080 AGAGACGCCATCACCTCCAT 60.689 55.000 0.00 0.00 0.00 3.41
181 182 0.249657 GAGACGCCATCACCTCCATC 60.250 60.000 0.00 0.00 0.00 3.51
182 183 0.977627 AGACGCCATCACCTCCATCA 60.978 55.000 0.00 0.00 0.00 3.07
183 184 0.107456 GACGCCATCACCTCCATCAT 59.893 55.000 0.00 0.00 0.00 2.45
184 185 0.107456 ACGCCATCACCTCCATCATC 59.893 55.000 0.00 0.00 0.00 2.92
185 186 0.107268 CGCCATCACCTCCATCATCA 59.893 55.000 0.00 0.00 0.00 3.07
186 187 1.602311 GCCATCACCTCCATCATCAC 58.398 55.000 0.00 0.00 0.00 3.06
187 188 1.816961 GCCATCACCTCCATCATCACC 60.817 57.143 0.00 0.00 0.00 4.02
188 189 1.202855 CCATCACCTCCATCATCACCC 60.203 57.143 0.00 0.00 0.00 4.61
189 190 1.143813 ATCACCTCCATCATCACCCC 58.856 55.000 0.00 0.00 0.00 4.95
190 191 0.253113 TCACCTCCATCATCACCCCA 60.253 55.000 0.00 0.00 0.00 4.96
191 192 0.182061 CACCTCCATCATCACCCCAG 59.818 60.000 0.00 0.00 0.00 4.45
192 193 1.150081 CCTCCATCATCACCCCAGC 59.850 63.158 0.00 0.00 0.00 4.85
193 194 1.351080 CCTCCATCATCACCCCAGCT 61.351 60.000 0.00 0.00 0.00 4.24
194 195 0.549950 CTCCATCATCACCCCAGCTT 59.450 55.000 0.00 0.00 0.00 3.74
195 196 0.548031 TCCATCATCACCCCAGCTTC 59.452 55.000 0.00 0.00 0.00 3.86
196 197 0.549950 CCATCATCACCCCAGCTTCT 59.450 55.000 0.00 0.00 0.00 2.85
197 198 1.676746 CATCATCACCCCAGCTTCTG 58.323 55.000 0.00 0.00 0.00 3.02
198 199 0.106819 ATCATCACCCCAGCTTCTGC 60.107 55.000 0.00 0.00 40.05 4.26
199 200 1.001764 CATCACCCCAGCTTCTGCA 60.002 57.895 0.00 0.00 42.74 4.41
200 201 0.609957 CATCACCCCAGCTTCTGCAA 60.610 55.000 0.00 0.00 42.74 4.08
201 202 0.333993 ATCACCCCAGCTTCTGCAAT 59.666 50.000 0.00 0.00 42.74 3.56
202 203 0.609957 TCACCCCAGCTTCTGCAATG 60.610 55.000 0.00 0.00 42.74 2.82
203 204 1.304713 ACCCCAGCTTCTGCAATGG 60.305 57.895 0.00 0.00 42.74 3.16
204 205 2.718073 CCCCAGCTTCTGCAATGGC 61.718 63.158 0.00 0.00 42.74 4.40
205 206 1.681327 CCCAGCTTCTGCAATGGCT 60.681 57.895 0.00 1.80 42.74 4.75
206 207 1.664321 CCCAGCTTCTGCAATGGCTC 61.664 60.000 0.00 0.00 42.74 4.70
207 208 0.680280 CCAGCTTCTGCAATGGCTCT 60.680 55.000 0.00 0.00 42.74 4.09
208 209 0.733729 CAGCTTCTGCAATGGCTCTC 59.266 55.000 0.00 0.00 42.74 3.20
209 210 0.394080 AGCTTCTGCAATGGCTCTCC 60.394 55.000 0.00 0.00 42.74 3.71
210 211 1.712977 GCTTCTGCAATGGCTCTCCG 61.713 60.000 0.00 0.00 41.91 4.63
211 212 1.078214 TTCTGCAATGGCTCTCCGG 60.078 57.895 0.00 0.00 41.91 5.14
212 213 1.841302 TTCTGCAATGGCTCTCCGGT 61.841 55.000 0.00 0.00 41.91 5.28
213 214 1.377725 CTGCAATGGCTCTCCGGTT 60.378 57.895 0.00 0.00 41.91 4.44
214 215 1.651240 CTGCAATGGCTCTCCGGTTG 61.651 60.000 0.00 0.00 41.91 3.77
215 216 2.409870 GCAATGGCTCTCCGGTTGG 61.410 63.158 0.00 0.00 36.96 3.77
216 217 2.044946 AATGGCTCTCCGGTTGGC 60.045 61.111 0.00 6.02 34.14 4.52
217 218 3.976701 AATGGCTCTCCGGTTGGCG 62.977 63.158 0.00 0.00 34.14 5.69
239 240 4.410400 CGCTTCCCCCACCACCTC 62.410 72.222 0.00 0.00 0.00 3.85
240 241 4.048470 GCTTCCCCCACCACCTCC 62.048 72.222 0.00 0.00 0.00 4.30
241 242 3.717294 CTTCCCCCACCACCTCCG 61.717 72.222 0.00 0.00 0.00 4.63
245 246 4.029809 CCCCACCACCTCCGGAAC 62.030 72.222 5.23 0.00 0.00 3.62
246 247 4.029809 CCCACCACCTCCGGAACC 62.030 72.222 5.23 0.00 0.00 3.62
247 248 3.246112 CCACCACCTCCGGAACCA 61.246 66.667 5.23 0.00 0.00 3.67
248 249 2.347490 CACCACCTCCGGAACCAG 59.653 66.667 5.23 0.00 0.00 4.00
249 250 2.203182 ACCACCTCCGGAACCAGA 59.797 61.111 5.23 0.00 0.00 3.86
250 251 1.229529 ACCACCTCCGGAACCAGAT 60.230 57.895 5.23 0.00 0.00 2.90
251 252 0.840722 ACCACCTCCGGAACCAGATT 60.841 55.000 5.23 0.00 0.00 2.40
252 253 1.200519 CCACCTCCGGAACCAGATTA 58.799 55.000 5.23 0.00 0.00 1.75
253 254 1.139058 CCACCTCCGGAACCAGATTAG 59.861 57.143 5.23 0.00 0.00 1.73
254 255 2.108168 CACCTCCGGAACCAGATTAGA 58.892 52.381 5.23 0.00 0.00 2.10
255 256 2.700897 CACCTCCGGAACCAGATTAGAT 59.299 50.000 5.23 0.00 0.00 1.98
256 257 2.966516 ACCTCCGGAACCAGATTAGATC 59.033 50.000 5.23 0.00 0.00 2.75
257 258 2.029828 CCTCCGGAACCAGATTAGATCG 60.030 54.545 5.23 0.00 0.00 3.69
258 259 2.623889 CTCCGGAACCAGATTAGATCGT 59.376 50.000 5.23 0.00 0.00 3.73
259 260 2.621998 TCCGGAACCAGATTAGATCGTC 59.378 50.000 0.00 0.00 0.00 4.20
260 261 2.361119 CCGGAACCAGATTAGATCGTCA 59.639 50.000 0.00 0.00 0.00 4.35
261 262 3.551046 CCGGAACCAGATTAGATCGTCAG 60.551 52.174 0.00 0.00 0.00 3.51
262 263 3.551046 CGGAACCAGATTAGATCGTCAGG 60.551 52.174 5.95 5.95 0.00 3.86
263 264 3.385111 GGAACCAGATTAGATCGTCAGGT 59.615 47.826 6.94 6.94 0.00 4.00
264 265 4.500035 GGAACCAGATTAGATCGTCAGGTC 60.500 50.000 11.31 5.07 0.00 3.85
265 266 2.619177 ACCAGATTAGATCGTCAGGTCG 59.381 50.000 6.94 0.00 0.00 4.79
266 267 2.619177 CCAGATTAGATCGTCAGGTCGT 59.381 50.000 0.00 0.00 0.00 4.34
267 268 3.304123 CCAGATTAGATCGTCAGGTCGTC 60.304 52.174 0.00 0.00 0.00 4.20
268 269 2.544686 AGATTAGATCGTCAGGTCGTCG 59.455 50.000 0.00 0.00 0.00 5.12
269 270 0.376152 TTAGATCGTCAGGTCGTCGC 59.624 55.000 0.00 0.00 0.00 5.19
270 271 1.434622 TAGATCGTCAGGTCGTCGCC 61.435 60.000 0.00 0.00 0.00 5.54
271 272 2.750637 ATCGTCAGGTCGTCGCCT 60.751 61.111 2.81 2.81 39.99 5.52
272 273 2.649843 GATCGTCAGGTCGTCGCCTC 62.650 65.000 5.39 0.00 36.58 4.70
273 274 4.477975 CGTCAGGTCGTCGCCTCC 62.478 72.222 5.39 0.00 36.58 4.30
274 275 4.477975 GTCAGGTCGTCGCCTCCG 62.478 72.222 5.39 0.00 36.58 4.63
295 296 2.593436 CCGCCGTCTTGGGTTGTT 60.593 61.111 0.00 0.00 38.63 2.83
296 297 2.190841 CCGCCGTCTTGGGTTGTTT 61.191 57.895 0.00 0.00 38.63 2.83
297 298 1.281656 CGCCGTCTTGGGTTGTTTC 59.718 57.895 0.00 0.00 38.63 2.78
298 299 1.281656 GCCGTCTTGGGTTGTTTCG 59.718 57.895 0.00 0.00 38.63 3.46
299 300 1.441732 GCCGTCTTGGGTTGTTTCGT 61.442 55.000 0.00 0.00 38.63 3.85
300 301 0.584876 CCGTCTTGGGTTGTTTCGTC 59.415 55.000 0.00 0.00 0.00 4.20
301 302 0.231279 CGTCTTGGGTTGTTTCGTCG 59.769 55.000 0.00 0.00 0.00 5.12
302 303 0.584876 GTCTTGGGTTGTTTCGTCGG 59.415 55.000 0.00 0.00 0.00 4.79
303 304 0.533308 TCTTGGGTTGTTTCGTCGGG 60.533 55.000 0.00 0.00 0.00 5.14
304 305 2.125202 CTTGGGTTGTTTCGTCGGGC 62.125 60.000 0.00 0.00 0.00 6.13
305 306 2.592287 GGGTTGTTTCGTCGGGCA 60.592 61.111 0.00 0.00 0.00 5.36
306 307 1.969589 GGGTTGTTTCGTCGGGCAT 60.970 57.895 0.00 0.00 0.00 4.40
307 308 1.520600 GGGTTGTTTCGTCGGGCATT 61.521 55.000 0.00 0.00 0.00 3.56
308 309 0.312729 GGTTGTTTCGTCGGGCATTT 59.687 50.000 0.00 0.00 0.00 2.32
309 310 1.404477 GTTGTTTCGTCGGGCATTTG 58.596 50.000 0.00 0.00 0.00 2.32
310 311 1.025812 TTGTTTCGTCGGGCATTTGT 58.974 45.000 0.00 0.00 0.00 2.83
311 312 0.309302 TGTTTCGTCGGGCATTTGTG 59.691 50.000 0.00 0.00 0.00 3.33
312 313 0.309612 GTTTCGTCGGGCATTTGTGT 59.690 50.000 0.00 0.00 0.00 3.72
313 314 1.025812 TTTCGTCGGGCATTTGTGTT 58.974 45.000 0.00 0.00 0.00 3.32
314 315 0.309302 TTCGTCGGGCATTTGTGTTG 59.691 50.000 0.00 0.00 0.00 3.33
315 316 1.081509 CGTCGGGCATTTGTGTTGG 60.082 57.895 0.00 0.00 0.00 3.77
316 317 1.288752 GTCGGGCATTTGTGTTGGG 59.711 57.895 0.00 0.00 0.00 4.12
317 318 2.048316 CGGGCATTTGTGTTGGGC 60.048 61.111 0.00 0.00 0.00 5.36
318 319 2.048316 GGGCATTTGTGTTGGGCG 60.048 61.111 0.00 0.00 0.00 6.13
319 320 2.733945 GGCATTTGTGTTGGGCGT 59.266 55.556 0.00 0.00 0.00 5.68
320 321 1.664333 GGCATTTGTGTTGGGCGTG 60.664 57.895 0.00 0.00 0.00 5.34
321 322 1.067250 GCATTTGTGTTGGGCGTGT 59.933 52.632 0.00 0.00 0.00 4.49
322 323 0.529555 GCATTTGTGTTGGGCGTGTT 60.530 50.000 0.00 0.00 0.00 3.32
323 324 1.207390 CATTTGTGTTGGGCGTGTTG 58.793 50.000 0.00 0.00 0.00 3.33
324 325 0.820871 ATTTGTGTTGGGCGTGTTGT 59.179 45.000 0.00 0.00 0.00 3.32
325 326 0.109086 TTTGTGTTGGGCGTGTTGTG 60.109 50.000 0.00 0.00 0.00 3.33
326 327 2.278531 GTGTTGGGCGTGTTGTGC 60.279 61.111 0.00 0.00 0.00 4.57
327 328 2.439338 TGTTGGGCGTGTTGTGCT 60.439 55.556 0.00 0.00 0.00 4.40
328 329 2.026014 GTTGGGCGTGTTGTGCTG 59.974 61.111 0.00 0.00 0.00 4.41
329 330 2.439338 TTGGGCGTGTTGTGCTGT 60.439 55.556 0.00 0.00 0.00 4.40
330 331 2.769539 TTGGGCGTGTTGTGCTGTG 61.770 57.895 0.00 0.00 0.00 3.66
331 332 4.629115 GGGCGTGTTGTGCTGTGC 62.629 66.667 0.00 0.00 0.00 4.57
332 333 4.629115 GGCGTGTTGTGCTGTGCC 62.629 66.667 0.00 0.00 35.04 5.01
333 334 4.629115 GCGTGTTGTGCTGTGCCC 62.629 66.667 0.00 0.00 0.00 5.36
334 335 3.208383 CGTGTTGTGCTGTGCCCA 61.208 61.111 0.00 0.00 0.00 5.36
335 336 2.554636 CGTGTTGTGCTGTGCCCAT 61.555 57.895 0.00 0.00 0.00 4.00
336 337 1.233950 CGTGTTGTGCTGTGCCCATA 61.234 55.000 0.00 0.00 0.00 2.74
337 338 0.523072 GTGTTGTGCTGTGCCCATAG 59.477 55.000 0.00 0.00 0.00 2.23
338 339 1.243342 TGTTGTGCTGTGCCCATAGC 61.243 55.000 9.70 9.70 44.48 2.97
339 340 2.039974 TTGTGCTGTGCCCATAGCG 61.040 57.895 11.51 0.00 46.76 4.26
340 341 3.204827 GTGCTGTGCCCATAGCGG 61.205 66.667 11.51 0.00 46.76 5.52
341 342 3.398310 TGCTGTGCCCATAGCGGA 61.398 61.111 11.51 0.00 46.76 5.54
342 343 2.965520 TGCTGTGCCCATAGCGGAA 61.966 57.895 11.51 0.00 46.76 4.30
347 348 3.827634 GCCCATAGCGGAACTTGG 58.172 61.111 0.00 0.00 36.56 3.61
348 349 1.823899 GCCCATAGCGGAACTTGGG 60.824 63.158 2.39 2.39 43.86 4.12
349 350 1.152963 CCCATAGCGGAACTTGGGG 60.153 63.158 0.00 0.00 40.39 4.96
350 351 1.607612 CCATAGCGGAACTTGGGGT 59.392 57.895 0.00 0.00 36.56 4.95
351 352 0.034477 CCATAGCGGAACTTGGGGTT 60.034 55.000 0.00 0.00 41.40 4.11
352 353 1.094785 CATAGCGGAACTTGGGGTTG 58.905 55.000 0.00 0.00 38.41 3.77
353 354 0.696501 ATAGCGGAACTTGGGGTTGT 59.303 50.000 0.00 0.00 38.41 3.32
354 355 0.250553 TAGCGGAACTTGGGGTTGTG 60.251 55.000 0.00 0.00 38.41 3.33
355 356 1.826487 GCGGAACTTGGGGTTGTGT 60.826 57.895 0.00 0.00 38.41 3.72
356 357 0.535553 GCGGAACTTGGGGTTGTGTA 60.536 55.000 0.00 0.00 38.41 2.90
357 358 1.884928 GCGGAACTTGGGGTTGTGTAT 60.885 52.381 0.00 0.00 38.41 2.29
358 359 1.810151 CGGAACTTGGGGTTGTGTATG 59.190 52.381 0.00 0.00 38.41 2.39
359 360 2.812613 CGGAACTTGGGGTTGTGTATGT 60.813 50.000 0.00 0.00 38.41 2.29
360 361 2.817844 GGAACTTGGGGTTGTGTATGTC 59.182 50.000 0.00 0.00 38.41 3.06
361 362 3.497942 GGAACTTGGGGTTGTGTATGTCT 60.498 47.826 0.00 0.00 38.41 3.41
362 363 3.140325 ACTTGGGGTTGTGTATGTCTG 57.860 47.619 0.00 0.00 0.00 3.51
363 364 2.441750 ACTTGGGGTTGTGTATGTCTGT 59.558 45.455 0.00 0.00 0.00 3.41
364 365 3.117663 ACTTGGGGTTGTGTATGTCTGTT 60.118 43.478 0.00 0.00 0.00 3.16
365 366 3.586470 TGGGGTTGTGTATGTCTGTTT 57.414 42.857 0.00 0.00 0.00 2.83
366 367 3.218453 TGGGGTTGTGTATGTCTGTTTG 58.782 45.455 0.00 0.00 0.00 2.93
367 368 3.219281 GGGGTTGTGTATGTCTGTTTGT 58.781 45.455 0.00 0.00 0.00 2.83
368 369 3.004315 GGGGTTGTGTATGTCTGTTTGTG 59.996 47.826 0.00 0.00 0.00 3.33
369 370 3.550030 GGGTTGTGTATGTCTGTTTGTGC 60.550 47.826 0.00 0.00 0.00 4.57
370 371 3.288242 GTTGTGTATGTCTGTTTGTGCG 58.712 45.455 0.00 0.00 0.00 5.34
371 372 2.556257 TGTGTATGTCTGTTTGTGCGT 58.444 42.857 0.00 0.00 0.00 5.24
372 373 2.286563 TGTGTATGTCTGTTTGTGCGTG 59.713 45.455 0.00 0.00 0.00 5.34
373 374 2.286833 GTGTATGTCTGTTTGTGCGTGT 59.713 45.455 0.00 0.00 0.00 4.49
374 375 3.491639 GTGTATGTCTGTTTGTGCGTGTA 59.508 43.478 0.00 0.00 0.00 2.90
375 376 4.151689 GTGTATGTCTGTTTGTGCGTGTAT 59.848 41.667 0.00 0.00 0.00 2.29
376 377 3.811722 ATGTCTGTTTGTGCGTGTATG 57.188 42.857 0.00 0.00 0.00 2.39
377 378 2.556257 TGTCTGTTTGTGCGTGTATGT 58.444 42.857 0.00 0.00 0.00 2.29
378 379 2.286563 TGTCTGTTTGTGCGTGTATGTG 59.713 45.455 0.00 0.00 0.00 3.21
379 380 2.286833 GTCTGTTTGTGCGTGTATGTGT 59.713 45.455 0.00 0.00 0.00 3.72
380 381 2.286563 TCTGTTTGTGCGTGTATGTGTG 59.713 45.455 0.00 0.00 0.00 3.82
381 382 1.332065 TGTTTGTGCGTGTATGTGTGG 59.668 47.619 0.00 0.00 0.00 4.17
382 383 0.309302 TTTGTGCGTGTATGTGTGGC 59.691 50.000 0.00 0.00 0.00 5.01
383 384 0.815615 TTGTGCGTGTATGTGTGGCA 60.816 50.000 0.00 0.00 0.00 4.92
384 385 1.206578 GTGCGTGTATGTGTGGCAC 59.793 57.895 11.55 11.55 45.82 5.01
385 386 1.963855 TGCGTGTATGTGTGGCACC 60.964 57.895 16.26 7.17 32.73 5.01
386 387 1.671054 GCGTGTATGTGTGGCACCT 60.671 57.895 16.26 2.32 32.73 4.00
387 388 1.911293 GCGTGTATGTGTGGCACCTG 61.911 60.000 16.26 0.00 32.73 4.00
388 389 0.320334 CGTGTATGTGTGGCACCTGA 60.320 55.000 16.26 0.00 32.73 3.86
389 390 1.156736 GTGTATGTGTGGCACCTGAC 58.843 55.000 16.26 7.43 32.73 3.51
390 391 1.055849 TGTATGTGTGGCACCTGACT 58.944 50.000 16.26 0.00 32.73 3.41
391 392 1.419762 TGTATGTGTGGCACCTGACTT 59.580 47.619 16.26 7.61 32.73 3.01
392 393 1.806542 GTATGTGTGGCACCTGACTTG 59.193 52.381 16.26 0.00 32.73 3.16
393 394 1.174712 ATGTGTGGCACCTGACTTGC 61.175 55.000 16.26 0.00 39.41 4.01
394 395 2.591429 TGTGGCACCTGACTTGCG 60.591 61.111 16.26 0.00 41.18 4.85
395 396 3.357079 GTGGCACCTGACTTGCGG 61.357 66.667 6.29 0.00 41.18 5.69
396 397 3.872603 TGGCACCTGACTTGCGGT 61.873 61.111 0.00 0.00 41.18 5.68
399 400 3.357079 CACCTGACTTGCGGTGGC 61.357 66.667 0.00 0.00 45.39 5.01
400 401 4.988598 ACCTGACTTGCGGTGGCG 62.989 66.667 0.00 0.00 44.10 5.69
401 402 4.988598 CCTGACTTGCGGTGGCGT 62.989 66.667 0.00 0.00 44.10 5.68
402 403 2.972505 CTGACTTGCGGTGGCGTT 60.973 61.111 0.00 0.00 44.10 4.84
403 404 3.240606 CTGACTTGCGGTGGCGTTG 62.241 63.158 0.00 0.00 44.10 4.10
404 405 3.276846 GACTTGCGGTGGCGTTGT 61.277 61.111 0.00 0.00 44.10 3.32
405 406 3.521308 GACTTGCGGTGGCGTTGTG 62.521 63.158 0.00 0.00 44.10 3.33
406 407 3.582120 CTTGCGGTGGCGTTGTGT 61.582 61.111 0.00 0.00 44.10 3.72
407 408 3.805385 CTTGCGGTGGCGTTGTGTG 62.805 63.158 0.00 0.00 44.10 3.82
409 410 4.605967 GCGGTGGCGTTGTGTGTG 62.606 66.667 0.00 0.00 0.00 3.82
410 411 3.947841 CGGTGGCGTTGTGTGTGG 61.948 66.667 0.00 0.00 0.00 4.17
411 412 3.591835 GGTGGCGTTGTGTGTGGG 61.592 66.667 0.00 0.00 0.00 4.61
412 413 2.826738 GTGGCGTTGTGTGTGGGT 60.827 61.111 0.00 0.00 0.00 4.51
413 414 2.826287 TGGCGTTGTGTGTGGGTG 60.826 61.111 0.00 0.00 0.00 4.61
414 415 2.826738 GGCGTTGTGTGTGGGTGT 60.827 61.111 0.00 0.00 0.00 4.16
415 416 2.407210 GCGTTGTGTGTGGGTGTG 59.593 61.111 0.00 0.00 0.00 3.82
416 417 2.403378 GCGTTGTGTGTGGGTGTGT 61.403 57.895 0.00 0.00 0.00 3.72
417 418 1.427419 CGTTGTGTGTGGGTGTGTG 59.573 57.895 0.00 0.00 0.00 3.82
418 419 1.138671 GTTGTGTGTGGGTGTGTGC 59.861 57.895 0.00 0.00 0.00 4.57
419 420 1.001517 TTGTGTGTGGGTGTGTGCT 60.002 52.632 0.00 0.00 0.00 4.40
420 421 1.311651 TTGTGTGTGGGTGTGTGCTG 61.312 55.000 0.00 0.00 0.00 4.41
421 422 1.748879 GTGTGTGGGTGTGTGCTGT 60.749 57.895 0.00 0.00 0.00 4.40
422 423 1.748500 TGTGTGGGTGTGTGCTGTG 60.749 57.895 0.00 0.00 0.00 3.66
423 424 1.748879 GTGTGGGTGTGTGCTGTGT 60.749 57.895 0.00 0.00 0.00 3.72
424 425 1.001517 TGTGGGTGTGTGCTGTGTT 60.002 52.632 0.00 0.00 0.00 3.32
425 426 1.029408 TGTGGGTGTGTGCTGTGTTC 61.029 55.000 0.00 0.00 0.00 3.18
426 427 0.748005 GTGGGTGTGTGCTGTGTTCT 60.748 55.000 0.00 0.00 0.00 3.01
427 428 0.747644 TGGGTGTGTGCTGTGTTCTG 60.748 55.000 0.00 0.00 0.00 3.02
428 429 0.748005 GGGTGTGTGCTGTGTTCTGT 60.748 55.000 0.00 0.00 0.00 3.41
429 430 0.657840 GGTGTGTGCTGTGTTCTGTC 59.342 55.000 0.00 0.00 0.00 3.51
430 431 0.301687 GTGTGTGCTGTGTTCTGTCG 59.698 55.000 0.00 0.00 0.00 4.35
431 432 0.108377 TGTGTGCTGTGTTCTGTCGT 60.108 50.000 0.00 0.00 0.00 4.34
432 433 1.006832 GTGTGCTGTGTTCTGTCGTT 58.993 50.000 0.00 0.00 0.00 3.85
433 434 2.198406 GTGTGCTGTGTTCTGTCGTTA 58.802 47.619 0.00 0.00 0.00 3.18
434 435 2.034001 GTGTGCTGTGTTCTGTCGTTAC 60.034 50.000 0.00 0.00 0.00 2.50
435 436 1.525619 GTGCTGTGTTCTGTCGTTACC 59.474 52.381 0.00 0.00 0.00 2.85
436 437 1.411246 TGCTGTGTTCTGTCGTTACCT 59.589 47.619 0.00 0.00 0.00 3.08
437 438 2.159014 TGCTGTGTTCTGTCGTTACCTT 60.159 45.455 0.00 0.00 0.00 3.50
438 439 2.221055 GCTGTGTTCTGTCGTTACCTTG 59.779 50.000 0.00 0.00 0.00 3.61
439 440 3.713288 CTGTGTTCTGTCGTTACCTTGA 58.287 45.455 0.00 0.00 0.00 3.02
440 441 4.307432 CTGTGTTCTGTCGTTACCTTGAT 58.693 43.478 0.00 0.00 0.00 2.57
441 442 5.456548 TGTGTTCTGTCGTTACCTTGATA 57.543 39.130 0.00 0.00 0.00 2.15
442 443 5.224888 TGTGTTCTGTCGTTACCTTGATAC 58.775 41.667 0.00 0.00 0.00 2.24
443 444 5.010314 TGTGTTCTGTCGTTACCTTGATACT 59.990 40.000 0.00 0.00 0.00 2.12
444 445 5.924825 GTGTTCTGTCGTTACCTTGATACTT 59.075 40.000 0.00 0.00 0.00 2.24
445 446 6.423001 GTGTTCTGTCGTTACCTTGATACTTT 59.577 38.462 0.00 0.00 0.00 2.66
446 447 6.422701 TGTTCTGTCGTTACCTTGATACTTTG 59.577 38.462 0.00 0.00 0.00 2.77
447 448 6.092955 TCTGTCGTTACCTTGATACTTTGT 57.907 37.500 0.00 0.00 0.00 2.83
448 449 5.924254 TCTGTCGTTACCTTGATACTTTGTG 59.076 40.000 0.00 0.00 0.00 3.33
449 450 4.449743 TGTCGTTACCTTGATACTTTGTGC 59.550 41.667 0.00 0.00 0.00 4.57
450 451 4.689345 GTCGTTACCTTGATACTTTGTGCT 59.311 41.667 0.00 0.00 0.00 4.40
451 452 5.178809 GTCGTTACCTTGATACTTTGTGCTT 59.821 40.000 0.00 0.00 0.00 3.91
452 453 5.178623 TCGTTACCTTGATACTTTGTGCTTG 59.821 40.000 0.00 0.00 0.00 4.01
453 454 5.616866 CGTTACCTTGATACTTTGTGCTTGG 60.617 44.000 0.00 0.00 0.00 3.61
454 455 3.832527 ACCTTGATACTTTGTGCTTGGT 58.167 40.909 0.00 0.00 0.00 3.67
455 456 3.569701 ACCTTGATACTTTGTGCTTGGTG 59.430 43.478 0.00 0.00 0.00 4.17
456 457 3.057315 CCTTGATACTTTGTGCTTGGTGG 60.057 47.826 0.00 0.00 0.00 4.61
457 458 2.513753 TGATACTTTGTGCTTGGTGGG 58.486 47.619 0.00 0.00 0.00 4.61
458 459 2.158534 TGATACTTTGTGCTTGGTGGGT 60.159 45.455 0.00 0.00 0.00 4.51
459 460 1.686355 TACTTTGTGCTTGGTGGGTG 58.314 50.000 0.00 0.00 0.00 4.61
460 461 1.067916 CTTTGTGCTTGGTGGGTGC 59.932 57.895 0.00 0.00 0.00 5.01
461 462 1.381056 TTTGTGCTTGGTGGGTGCT 60.381 52.632 0.00 0.00 0.00 4.40
462 463 0.975040 TTTGTGCTTGGTGGGTGCTT 60.975 50.000 0.00 0.00 0.00 3.91
463 464 0.975040 TTGTGCTTGGTGGGTGCTTT 60.975 50.000 0.00 0.00 0.00 3.51
464 465 0.106469 TGTGCTTGGTGGGTGCTTTA 60.106 50.000 0.00 0.00 0.00 1.85
465 466 1.256812 GTGCTTGGTGGGTGCTTTAT 58.743 50.000 0.00 0.00 0.00 1.40
466 467 1.618343 GTGCTTGGTGGGTGCTTTATT 59.382 47.619 0.00 0.00 0.00 1.40
467 468 2.037121 GTGCTTGGTGGGTGCTTTATTT 59.963 45.455 0.00 0.00 0.00 1.40
468 469 3.257127 GTGCTTGGTGGGTGCTTTATTTA 59.743 43.478 0.00 0.00 0.00 1.40
469 470 4.081697 GTGCTTGGTGGGTGCTTTATTTAT 60.082 41.667 0.00 0.00 0.00 1.40
470 471 5.126384 GTGCTTGGTGGGTGCTTTATTTATA 59.874 40.000 0.00 0.00 0.00 0.98
471 472 5.717178 TGCTTGGTGGGTGCTTTATTTATAA 59.283 36.000 0.00 0.00 0.00 0.98
472 473 6.211584 TGCTTGGTGGGTGCTTTATTTATAAA 59.788 34.615 0.00 0.00 0.00 1.40
482 483 5.427036 CTTTATTTATAAAGCGGGGCGAA 57.573 39.130 8.78 0.00 41.69 4.70
483 484 5.823353 CTTTATTTATAAAGCGGGGCGAAA 58.177 37.500 8.78 0.00 41.69 3.46
484 485 5.831702 TTATTTATAAAGCGGGGCGAAAA 57.168 34.783 3.94 0.00 0.00 2.29
485 486 3.490800 TTTATAAAGCGGGGCGAAAAC 57.509 42.857 0.00 0.00 0.00 2.43
486 487 1.381522 TATAAAGCGGGGCGAAAACC 58.618 50.000 0.00 0.00 0.00 3.27
487 488 0.323087 ATAAAGCGGGGCGAAAACCT 60.323 50.000 0.00 0.00 0.00 3.50
488 489 0.537828 TAAAGCGGGGCGAAAACCTT 60.538 50.000 0.00 0.00 0.00 3.50
489 490 1.396607 AAAGCGGGGCGAAAACCTTT 61.397 50.000 0.00 0.00 0.00 3.11
490 491 1.396607 AAGCGGGGCGAAAACCTTTT 61.397 50.000 0.00 0.00 0.00 2.27
491 492 1.068417 GCGGGGCGAAAACCTTTTT 59.932 52.632 0.00 0.00 0.00 1.94
492 493 0.942410 GCGGGGCGAAAACCTTTTTC 60.942 55.000 1.93 1.93 0.00 2.29
522 523 5.227569 TGAGTATATATGCCCACCTGTTG 57.772 43.478 0.00 0.00 0.00 3.33
523 524 4.003648 GAGTATATATGCCCACCTGTTGC 58.996 47.826 0.00 0.00 0.00 4.17
527 528 0.683828 TATGCCCACCTGTTGCATGG 60.684 55.000 12.10 0.00 44.85 3.66
532 533 2.993264 ACCTGTTGCATGGCAGCC 60.993 61.111 3.66 3.66 40.61 4.85
534 535 2.280552 CCTGTTGCATGGCAGCCTT 61.281 57.895 14.15 2.78 40.61 4.35
536 537 0.889994 CTGTTGCATGGCAGCCTTTA 59.110 50.000 14.15 0.00 40.61 1.85
537 538 1.479323 CTGTTGCATGGCAGCCTTTAT 59.521 47.619 14.15 0.00 40.61 1.40
538 539 1.205179 TGTTGCATGGCAGCCTTTATG 59.795 47.619 14.15 9.47 40.61 1.90
539 540 1.477700 GTTGCATGGCAGCCTTTATGA 59.522 47.619 14.15 0.00 40.61 2.15
569 570 6.690194 ATCCTACTAGCTTGCAAATGAAAG 57.310 37.500 0.00 0.00 33.72 2.62
579 580 2.036217 TGCAAATGAAAGCAGGGTTCTG 59.964 45.455 0.00 0.00 43.64 3.02
580 581 2.036346 GCAAATGAAAGCAGGGTTCTGT 59.964 45.455 0.00 0.00 42.78 3.41
585 586 2.426738 TGAAAGCAGGGTTCTGTTTGTG 59.573 45.455 0.00 0.00 42.34 3.33
622 1633 6.980416 GGATATCCCAACTTCTACTGTAGT 57.020 41.667 11.02 0.00 34.14 2.73
623 1634 7.362802 GGATATCCCAACTTCTACTGTAGTT 57.637 40.000 11.02 1.86 34.78 2.24
624 1635 7.793036 GGATATCCCAACTTCTACTGTAGTTT 58.207 38.462 11.02 4.44 32.65 2.66
625 1636 8.265764 GGATATCCCAACTTCTACTGTAGTTTT 58.734 37.037 11.02 4.13 32.65 2.43
628 1639 7.364149 TCCCAACTTCTACTGTAGTTTTACA 57.636 36.000 14.11 0.00 37.45 2.41
629 1640 7.212274 TCCCAACTTCTACTGTAGTTTTACAC 58.788 38.462 14.11 0.00 34.91 2.90
630 1641 6.987992 CCCAACTTCTACTGTAGTTTTACACA 59.012 38.462 14.11 0.00 34.91 3.72
631 1642 7.496591 CCCAACTTCTACTGTAGTTTTACACAA 59.503 37.037 14.11 0.00 34.91 3.33
632 1643 8.548721 CCAACTTCTACTGTAGTTTTACACAAG 58.451 37.037 14.11 10.00 34.91 3.16
635 1646 9.962783 ACTTCTACTGTAGTTTTACACAAGTAG 57.037 33.333 14.11 0.00 37.38 2.57
636 1647 9.408069 CTTCTACTGTAGTTTTACACAAGTAGG 57.592 37.037 14.11 0.00 37.04 3.18
637 1648 8.696043 TCTACTGTAGTTTTACACAAGTAGGA 57.304 34.615 14.11 0.00 37.04 2.94
641 1652 9.086758 ACTGTAGTTTTACACAAGTAGGATACT 57.913 33.333 0.00 0.00 43.55 2.12
658 1669 5.733676 GGATACTACTTTTTCGGGGTACAA 58.266 41.667 0.00 0.00 0.00 2.41
659 1670 5.814188 GGATACTACTTTTTCGGGGTACAAG 59.186 44.000 0.00 0.00 0.00 3.16
661 1672 4.891260 ACTACTTTTTCGGGGTACAAGAG 58.109 43.478 0.00 0.00 0.00 2.85
705 2008 0.532862 CCACTTGCACCACTCGTTCT 60.533 55.000 0.00 0.00 0.00 3.01
711 2014 4.202182 ACTTGCACCACTCGTTCTTAGTAA 60.202 41.667 0.00 0.00 0.00 2.24
719 2056 2.161855 TCGTTCTTAGTAACAGCCGGA 58.838 47.619 5.05 0.00 0.00 5.14
768 2107 1.944035 CAATCGATCATGGCCACGG 59.056 57.895 8.16 3.01 0.00 4.94
777 2116 2.134287 ATGGCCACGGAGTCGCTAT 61.134 57.895 8.16 0.00 45.92 2.97
801 2156 1.053048 CTTAGTGCCGCGTATCATCG 58.947 55.000 4.92 0.00 0.00 3.84
897 2260 0.933097 GGAGTACACATGCATGCGAG 59.067 55.000 26.53 18.12 0.00 5.03
958 2321 4.219070 CAGCAAGTTTTCTTCATCCCATCA 59.781 41.667 0.00 0.00 38.17 3.07
994 2363 0.752376 GAGTAGCTACCCCGAGCAGT 60.752 60.000 20.31 0.00 45.43 4.40
1215 2650 1.151899 TAGCCCAACTCCCACCACT 60.152 57.895 0.00 0.00 0.00 4.00
1247 4469 0.034767 TCTTCTCCGACGAGCCCTAA 60.035 55.000 0.00 0.00 35.94 2.69
1319 4553 2.941025 CACCCCCACTCCCACCAT 60.941 66.667 0.00 0.00 0.00 3.55
1506 4747 2.612972 CGACTGCTTTGTCCAGGTACAT 60.613 50.000 0.00 0.00 34.65 2.29
1508 4749 3.933332 GACTGCTTTGTCCAGGTACATAC 59.067 47.826 0.00 0.00 34.65 2.39
1880 5178 0.821711 CACCCTTCGCCAACCTCAAA 60.822 55.000 0.00 0.00 0.00 2.69
1903 5201 1.334960 CCTCACACAAATGTTCGCCAC 60.335 52.381 0.00 0.00 36.72 5.01
2555 5854 7.094634 GCAATACTTTTCACTGAGATTGAGGAA 60.095 37.037 0.00 0.00 0.00 3.36
2556 5855 8.954350 CAATACTTTTCACTGAGATTGAGGAAT 58.046 33.333 0.00 0.00 0.00 3.01
2557 5856 9.525826 AATACTTTTCACTGAGATTGAGGAATT 57.474 29.630 0.00 0.00 0.00 2.17
2964 7845 6.993786 TGTACGAATCTCCATGCAAAATTA 57.006 33.333 0.00 0.00 0.00 1.40
3048 8371 7.687445 ACTGAAACGAAAAACAAGTTATACGT 58.313 30.769 0.00 0.00 0.00 3.57
3140 8463 4.217118 GGTGATATTCAAATGCCTAGCTGG 59.783 45.833 0.00 0.00 39.35 4.85
3226 8549 3.706373 GGAGGGCTTCTGCGGTCA 61.706 66.667 0.00 0.00 40.82 4.02
3269 8593 0.030908 ATAAGCCGCTACTCGACTGC 59.969 55.000 0.00 0.00 41.67 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.399744 AACAGTCCACAGCGTCCAGA 61.400 55.000 0.00 0.00 0.00 3.86
34 35 0.317160 TAACAGTCCACAGCGTCCAG 59.683 55.000 0.00 0.00 0.00 3.86
73 74 1.067212 GCACGACGAAGAGGGATATGT 59.933 52.381 0.00 0.00 0.00 2.29
79 80 0.179161 CAGTAGCACGACGAAGAGGG 60.179 60.000 0.00 0.00 0.00 4.30
80 81 0.803117 TCAGTAGCACGACGAAGAGG 59.197 55.000 0.00 0.00 0.00 3.69
81 82 1.465387 AGTCAGTAGCACGACGAAGAG 59.535 52.381 0.00 0.00 37.23 2.85
82 83 1.520494 AGTCAGTAGCACGACGAAGA 58.480 50.000 0.00 0.00 37.23 2.87
83 84 2.333389 AAGTCAGTAGCACGACGAAG 57.667 50.000 0.00 0.00 37.23 3.79
84 85 2.787601 AAAGTCAGTAGCACGACGAA 57.212 45.000 0.00 0.00 37.23 3.85
85 86 2.787601 AAAAGTCAGTAGCACGACGA 57.212 45.000 0.00 0.00 37.23 4.20
86 87 2.538449 ACAAAAAGTCAGTAGCACGACG 59.462 45.455 0.00 0.00 37.23 5.12
87 88 4.033587 TGAACAAAAAGTCAGTAGCACGAC 59.966 41.667 0.00 0.00 0.00 4.34
88 89 4.185394 TGAACAAAAAGTCAGTAGCACGA 58.815 39.130 0.00 0.00 0.00 4.35
89 90 4.530094 TGAACAAAAAGTCAGTAGCACG 57.470 40.909 0.00 0.00 0.00 5.34
90 91 6.198966 CCATTTGAACAAAAAGTCAGTAGCAC 59.801 38.462 4.12 0.00 33.56 4.40
91 92 6.127479 ACCATTTGAACAAAAAGTCAGTAGCA 60.127 34.615 4.12 0.00 33.56 3.49
92 93 6.273071 ACCATTTGAACAAAAAGTCAGTAGC 58.727 36.000 4.12 0.00 33.56 3.58
93 94 7.645340 CAGACCATTTGAACAAAAAGTCAGTAG 59.355 37.037 22.49 12.71 38.13 2.57
94 95 7.416213 CCAGACCATTTGAACAAAAAGTCAGTA 60.416 37.037 22.49 0.00 38.13 2.74
95 96 6.332630 CAGACCATTTGAACAAAAAGTCAGT 58.667 36.000 22.49 10.00 38.13 3.41
96 97 5.750067 CCAGACCATTTGAACAAAAAGTCAG 59.250 40.000 22.49 17.90 38.13 3.51
97 98 5.186797 ACCAGACCATTTGAACAAAAAGTCA 59.813 36.000 22.49 0.00 38.13 3.41
98 99 5.660460 ACCAGACCATTTGAACAAAAAGTC 58.340 37.500 17.39 17.39 37.00 3.01
99 100 5.675684 ACCAGACCATTTGAACAAAAAGT 57.324 34.783 4.12 4.99 33.56 2.66
100 101 7.264947 AGTAACCAGACCATTTGAACAAAAAG 58.735 34.615 4.12 2.10 33.56 2.27
101 102 7.176589 AGTAACCAGACCATTTGAACAAAAA 57.823 32.000 4.12 0.00 33.56 1.94
102 103 6.783708 AGTAACCAGACCATTTGAACAAAA 57.216 33.333 4.12 0.00 33.56 2.44
103 104 6.568869 CAAGTAACCAGACCATTTGAACAAA 58.431 36.000 2.48 2.48 34.46 2.83
104 105 5.451242 GCAAGTAACCAGACCATTTGAACAA 60.451 40.000 0.00 0.00 0.00 2.83
105 106 4.037446 GCAAGTAACCAGACCATTTGAACA 59.963 41.667 0.00 0.00 0.00 3.18
106 107 4.037446 TGCAAGTAACCAGACCATTTGAAC 59.963 41.667 0.00 0.00 0.00 3.18
107 108 4.211125 TGCAAGTAACCAGACCATTTGAA 58.789 39.130 0.00 0.00 0.00 2.69
108 109 3.820467 CTGCAAGTAACCAGACCATTTGA 59.180 43.478 0.00 0.00 0.00 2.69
109 110 3.612479 GCTGCAAGTAACCAGACCATTTG 60.612 47.826 0.00 0.00 35.30 2.32
110 111 2.558359 GCTGCAAGTAACCAGACCATTT 59.442 45.455 0.00 0.00 35.30 2.32
111 112 2.162681 GCTGCAAGTAACCAGACCATT 58.837 47.619 0.00 0.00 35.30 3.16
112 113 1.352352 AGCTGCAAGTAACCAGACCAT 59.648 47.619 1.02 0.00 35.30 3.55
113 114 0.764890 AGCTGCAAGTAACCAGACCA 59.235 50.000 1.02 0.00 35.30 4.02
114 115 1.897560 AAGCTGCAAGTAACCAGACC 58.102 50.000 1.02 0.00 35.30 3.85
115 116 2.030805 CCAAAGCTGCAAGTAACCAGAC 60.031 50.000 1.02 0.00 35.30 3.51
116 117 2.229792 CCAAAGCTGCAAGTAACCAGA 58.770 47.619 1.02 0.00 35.30 3.86
117 118 1.336240 GCCAAAGCTGCAAGTAACCAG 60.336 52.381 1.02 0.00 35.30 4.00
118 119 0.673437 GCCAAAGCTGCAAGTAACCA 59.327 50.000 1.02 0.00 35.30 3.67
119 120 0.387239 CGCCAAAGCTGCAAGTAACC 60.387 55.000 1.02 0.00 36.60 2.85
120 121 0.387239 CCGCCAAAGCTGCAAGTAAC 60.387 55.000 1.02 0.00 36.60 2.50
121 122 1.956043 CCGCCAAAGCTGCAAGTAA 59.044 52.632 1.02 0.00 36.60 2.24
122 123 3.667087 CCGCCAAAGCTGCAAGTA 58.333 55.556 1.02 0.00 36.60 2.24
129 130 4.715523 TAAGCGGCCGCCAAAGCT 62.716 61.111 44.47 24.50 43.17 3.74
130 131 4.179579 CTAAGCGGCCGCCAAAGC 62.180 66.667 44.47 18.77 43.17 3.51
131 132 4.179579 GCTAAGCGGCCGCCAAAG 62.180 66.667 44.47 35.89 43.17 2.77
140 141 4.530857 CCTGGGACGGCTAAGCGG 62.531 72.222 0.00 0.00 35.02 5.52
141 142 4.530857 CCCTGGGACGGCTAAGCG 62.531 72.222 7.01 0.00 0.00 4.68
142 143 3.081409 TCCCTGGGACGGCTAAGC 61.081 66.667 12.53 0.00 0.00 3.09
143 144 1.381327 TCTCCCTGGGACGGCTAAG 60.381 63.158 12.53 0.00 0.00 2.18
144 145 1.381327 CTCTCCCTGGGACGGCTAA 60.381 63.158 12.53 0.00 0.00 3.09
145 146 2.279073 CTCTCCCTGGGACGGCTA 59.721 66.667 12.53 0.00 0.00 3.93
146 147 3.670629 CTCTCTCCCTGGGACGGCT 62.671 68.421 12.53 0.00 0.00 5.52
147 148 3.151022 CTCTCTCCCTGGGACGGC 61.151 72.222 12.53 0.00 0.00 5.68
148 149 1.755008 GTCTCTCTCCCTGGGACGG 60.755 68.421 12.53 7.59 0.00 4.79
149 150 2.115911 CGTCTCTCTCCCTGGGACG 61.116 68.421 12.53 9.77 42.38 4.79
150 151 2.419739 GCGTCTCTCTCCCTGGGAC 61.420 68.421 12.53 0.00 0.00 4.46
151 152 2.043852 GCGTCTCTCTCCCTGGGA 60.044 66.667 16.13 16.13 0.00 4.37
152 153 3.151022 GGCGTCTCTCTCCCTGGG 61.151 72.222 6.33 6.33 0.00 4.45
153 154 1.743321 GATGGCGTCTCTCTCCCTGG 61.743 65.000 0.00 0.00 0.00 4.45
154 155 1.039785 TGATGGCGTCTCTCTCCCTG 61.040 60.000 8.40 0.00 0.00 4.45
155 156 1.040339 GTGATGGCGTCTCTCTCCCT 61.040 60.000 8.40 0.00 0.00 4.20
156 157 1.439644 GTGATGGCGTCTCTCTCCC 59.560 63.158 8.40 0.00 0.00 4.30
157 158 1.040339 AGGTGATGGCGTCTCTCTCC 61.040 60.000 8.40 0.00 0.00 3.71
158 159 0.383949 GAGGTGATGGCGTCTCTCTC 59.616 60.000 17.33 13.56 0.00 3.20
159 160 1.040339 GGAGGTGATGGCGTCTCTCT 61.040 60.000 21.07 12.28 32.39 3.10
160 161 1.323271 TGGAGGTGATGGCGTCTCTC 61.323 60.000 16.72 16.72 0.00 3.20
161 162 0.689080 ATGGAGGTGATGGCGTCTCT 60.689 55.000 8.40 5.62 0.00 3.10
162 163 0.249657 GATGGAGGTGATGGCGTCTC 60.250 60.000 8.40 4.14 0.00 3.36
163 164 0.977627 TGATGGAGGTGATGGCGTCT 60.978 55.000 8.40 0.00 0.00 4.18
164 165 0.107456 ATGATGGAGGTGATGGCGTC 59.893 55.000 0.00 0.00 0.00 5.19
165 166 0.107456 GATGATGGAGGTGATGGCGT 59.893 55.000 0.00 0.00 0.00 5.68
166 167 0.107268 TGATGATGGAGGTGATGGCG 59.893 55.000 0.00 0.00 0.00 5.69
167 168 1.602311 GTGATGATGGAGGTGATGGC 58.398 55.000 0.00 0.00 0.00 4.40
168 169 1.202855 GGGTGATGATGGAGGTGATGG 60.203 57.143 0.00 0.00 0.00 3.51
169 170 1.202855 GGGGTGATGATGGAGGTGATG 60.203 57.143 0.00 0.00 0.00 3.07
170 171 1.143813 GGGGTGATGATGGAGGTGAT 58.856 55.000 0.00 0.00 0.00 3.06
171 172 0.253113 TGGGGTGATGATGGAGGTGA 60.253 55.000 0.00 0.00 0.00 4.02
172 173 0.182061 CTGGGGTGATGATGGAGGTG 59.818 60.000 0.00 0.00 0.00 4.00
173 174 1.639635 GCTGGGGTGATGATGGAGGT 61.640 60.000 0.00 0.00 0.00 3.85
174 175 1.150081 GCTGGGGTGATGATGGAGG 59.850 63.158 0.00 0.00 0.00 4.30
175 176 0.549950 AAGCTGGGGTGATGATGGAG 59.450 55.000 0.00 0.00 0.00 3.86
176 177 0.548031 GAAGCTGGGGTGATGATGGA 59.452 55.000 0.00 0.00 0.00 3.41
177 178 0.549950 AGAAGCTGGGGTGATGATGG 59.450 55.000 0.00 0.00 0.00 3.51
178 179 1.676746 CAGAAGCTGGGGTGATGATG 58.323 55.000 0.00 0.00 0.00 3.07
179 180 0.106819 GCAGAAGCTGGGGTGATGAT 60.107 55.000 0.00 0.00 37.91 2.45
180 181 1.300963 GCAGAAGCTGGGGTGATGA 59.699 57.895 0.00 0.00 37.91 2.92
181 182 0.609957 TTGCAGAAGCTGGGGTGATG 60.610 55.000 0.00 0.00 42.74 3.07
182 183 0.333993 ATTGCAGAAGCTGGGGTGAT 59.666 50.000 0.00 0.00 42.74 3.06
183 184 0.609957 CATTGCAGAAGCTGGGGTGA 60.610 55.000 0.00 0.00 42.74 4.02
184 185 1.601419 CCATTGCAGAAGCTGGGGTG 61.601 60.000 0.00 0.00 42.74 4.61
185 186 1.304713 CCATTGCAGAAGCTGGGGT 60.305 57.895 0.00 0.00 42.74 4.95
186 187 2.718073 GCCATTGCAGAAGCTGGGG 61.718 63.158 0.00 0.00 42.74 4.96
187 188 1.664321 GAGCCATTGCAGAAGCTGGG 61.664 60.000 10.70 0.00 42.74 4.45
188 189 0.680280 AGAGCCATTGCAGAAGCTGG 60.680 55.000 10.70 4.47 42.74 4.85
189 190 0.733729 GAGAGCCATTGCAGAAGCTG 59.266 55.000 10.70 0.00 42.74 4.24
190 191 0.394080 GGAGAGCCATTGCAGAAGCT 60.394 55.000 6.18 6.18 42.74 3.74
191 192 1.712977 CGGAGAGCCATTGCAGAAGC 61.713 60.000 0.00 0.00 41.13 3.86
192 193 1.094073 CCGGAGAGCCATTGCAGAAG 61.094 60.000 0.00 0.00 41.13 2.85
193 194 1.078214 CCGGAGAGCCATTGCAGAA 60.078 57.895 0.00 0.00 41.13 3.02
194 195 1.841302 AACCGGAGAGCCATTGCAGA 61.841 55.000 9.46 0.00 41.13 4.26
195 196 1.377725 AACCGGAGAGCCATTGCAG 60.378 57.895 9.46 0.00 41.13 4.41
196 197 1.675310 CAACCGGAGAGCCATTGCA 60.675 57.895 9.46 0.00 41.13 4.08
197 198 2.409870 CCAACCGGAGAGCCATTGC 61.410 63.158 9.46 0.00 31.58 3.56
198 199 2.409870 GCCAACCGGAGAGCCATTG 61.410 63.158 9.46 0.00 32.34 2.82
199 200 2.044946 GCCAACCGGAGAGCCATT 60.045 61.111 9.46 0.00 0.00 3.16
200 201 4.473520 CGCCAACCGGAGAGCCAT 62.474 66.667 9.46 0.00 32.98 4.40
222 223 4.410400 GAGGTGGTGGGGGAAGCG 62.410 72.222 0.00 0.00 0.00 4.68
223 224 4.048470 GGAGGTGGTGGGGGAAGC 62.048 72.222 0.00 0.00 0.00 3.86
224 225 3.717294 CGGAGGTGGTGGGGGAAG 61.717 72.222 0.00 0.00 0.00 3.46
237 238 2.623889 ACGATCTAATCTGGTTCCGGAG 59.376 50.000 3.34 0.00 0.00 4.63
238 239 2.621998 GACGATCTAATCTGGTTCCGGA 59.378 50.000 0.00 0.00 0.00 5.14
239 240 2.361119 TGACGATCTAATCTGGTTCCGG 59.639 50.000 0.00 0.00 0.00 5.14
240 241 3.551046 CCTGACGATCTAATCTGGTTCCG 60.551 52.174 0.00 0.00 31.20 4.30
241 242 3.385111 ACCTGACGATCTAATCTGGTTCC 59.615 47.826 11.76 0.00 42.62 3.62
242 243 4.612943 GACCTGACGATCTAATCTGGTTC 58.387 47.826 16.14 9.41 44.52 3.62
243 244 3.066900 CGACCTGACGATCTAATCTGGTT 59.933 47.826 16.14 5.82 44.52 3.67
244 245 2.619177 CGACCTGACGATCTAATCTGGT 59.381 50.000 15.41 15.41 46.43 4.00
245 246 2.619177 ACGACCTGACGATCTAATCTGG 59.381 50.000 10.81 10.81 39.26 3.86
246 247 3.605002 CGACGACCTGACGATCTAATCTG 60.605 52.174 0.00 0.00 37.99 2.90
247 248 2.544686 CGACGACCTGACGATCTAATCT 59.455 50.000 0.00 0.00 37.99 2.40
248 249 2.906153 CGACGACCTGACGATCTAATC 58.094 52.381 0.00 0.00 37.99 1.75
249 250 1.002684 GCGACGACCTGACGATCTAAT 60.003 52.381 0.00 0.00 37.99 1.73
250 251 0.376152 GCGACGACCTGACGATCTAA 59.624 55.000 0.00 0.00 37.99 2.10
251 252 1.434622 GGCGACGACCTGACGATCTA 61.435 60.000 0.00 0.00 37.99 1.98
252 253 2.762234 GGCGACGACCTGACGATCT 61.762 63.158 0.00 0.00 37.99 2.75
253 254 2.278013 GGCGACGACCTGACGATC 60.278 66.667 0.00 0.00 37.99 3.69
254 255 2.750637 AGGCGACGACCTGACGAT 60.751 61.111 9.58 0.00 39.13 3.73
255 256 3.429141 GAGGCGACGACCTGACGA 61.429 66.667 14.30 0.00 41.32 4.20
256 257 4.477975 GGAGGCGACGACCTGACG 62.478 72.222 14.30 0.00 41.32 4.35
257 258 4.477975 CGGAGGCGACGACCTGAC 62.478 72.222 14.30 7.32 41.32 3.51
278 279 2.125202 GAAACAACCCAAGACGGCGG 62.125 60.000 13.24 0.00 0.00 6.13
279 280 1.281656 GAAACAACCCAAGACGGCG 59.718 57.895 4.80 4.80 0.00 6.46
280 281 1.281656 CGAAACAACCCAAGACGGC 59.718 57.895 0.00 0.00 0.00 5.68
281 282 0.584876 GACGAAACAACCCAAGACGG 59.415 55.000 0.00 0.00 0.00 4.79
282 283 0.231279 CGACGAAACAACCCAAGACG 59.769 55.000 0.00 0.00 0.00 4.18
283 284 0.584876 CCGACGAAACAACCCAAGAC 59.415 55.000 0.00 0.00 0.00 3.01
284 285 0.533308 CCCGACGAAACAACCCAAGA 60.533 55.000 0.00 0.00 0.00 3.02
285 286 1.946267 CCCGACGAAACAACCCAAG 59.054 57.895 0.00 0.00 0.00 3.61
286 287 2.188161 GCCCGACGAAACAACCCAA 61.188 57.895 0.00 0.00 0.00 4.12
287 288 2.592287 GCCCGACGAAACAACCCA 60.592 61.111 0.00 0.00 0.00 4.51
288 289 1.520600 AATGCCCGACGAAACAACCC 61.521 55.000 0.00 0.00 0.00 4.11
289 290 0.312729 AAATGCCCGACGAAACAACC 59.687 50.000 0.00 0.00 0.00 3.77
290 291 1.268845 ACAAATGCCCGACGAAACAAC 60.269 47.619 0.00 0.00 0.00 3.32
291 292 1.025812 ACAAATGCCCGACGAAACAA 58.974 45.000 0.00 0.00 0.00 2.83
292 293 0.309302 CACAAATGCCCGACGAAACA 59.691 50.000 0.00 0.00 0.00 2.83
293 294 0.309612 ACACAAATGCCCGACGAAAC 59.690 50.000 0.00 0.00 0.00 2.78
294 295 1.025812 AACACAAATGCCCGACGAAA 58.974 45.000 0.00 0.00 0.00 3.46
295 296 0.309302 CAACACAAATGCCCGACGAA 59.691 50.000 0.00 0.00 0.00 3.85
296 297 1.511318 CCAACACAAATGCCCGACGA 61.511 55.000 0.00 0.00 0.00 4.20
297 298 1.081509 CCAACACAAATGCCCGACG 60.082 57.895 0.00 0.00 0.00 5.12
298 299 1.288752 CCCAACACAAATGCCCGAC 59.711 57.895 0.00 0.00 0.00 4.79
299 300 2.569354 GCCCAACACAAATGCCCGA 61.569 57.895 0.00 0.00 0.00 5.14
300 301 2.048316 GCCCAACACAAATGCCCG 60.048 61.111 0.00 0.00 0.00 6.13
301 302 2.048316 CGCCCAACACAAATGCCC 60.048 61.111 0.00 0.00 0.00 5.36
302 303 1.664333 CACGCCCAACACAAATGCC 60.664 57.895 0.00 0.00 0.00 4.40
303 304 0.529555 AACACGCCCAACACAAATGC 60.530 50.000 0.00 0.00 0.00 3.56
304 305 1.207390 CAACACGCCCAACACAAATG 58.793 50.000 0.00 0.00 0.00 2.32
305 306 0.820871 ACAACACGCCCAACACAAAT 59.179 45.000 0.00 0.00 0.00 2.32
306 307 0.109086 CACAACACGCCCAACACAAA 60.109 50.000 0.00 0.00 0.00 2.83
307 308 1.508545 CACAACACGCCCAACACAA 59.491 52.632 0.00 0.00 0.00 3.33
308 309 3.057547 GCACAACACGCCCAACACA 62.058 57.895 0.00 0.00 0.00 3.72
309 310 2.278531 GCACAACACGCCCAACAC 60.279 61.111 0.00 0.00 0.00 3.32
310 311 2.439338 AGCACAACACGCCCAACA 60.439 55.556 0.00 0.00 0.00 3.33
311 312 2.026014 CAGCACAACACGCCCAAC 59.974 61.111 0.00 0.00 0.00 3.77
312 313 2.439338 ACAGCACAACACGCCCAA 60.439 55.556 0.00 0.00 0.00 4.12
313 314 3.208383 CACAGCACAACACGCCCA 61.208 61.111 0.00 0.00 0.00 5.36
314 315 4.629115 GCACAGCACAACACGCCC 62.629 66.667 0.00 0.00 0.00 6.13
315 316 4.629115 GGCACAGCACAACACGCC 62.629 66.667 0.00 0.00 0.00 5.68
316 317 4.629115 GGGCACAGCACAACACGC 62.629 66.667 0.00 0.00 0.00 5.34
317 318 3.208383 TGGGCACAGCACAACACG 61.208 61.111 0.00 0.00 39.83 4.49
323 324 3.204827 CCGCTATGGGCACAGCAC 61.205 66.667 0.00 0.00 41.91 4.40
324 325 2.965520 TTCCGCTATGGGCACAGCA 61.966 57.895 0.00 0.00 41.91 4.41
325 326 2.124736 TTCCGCTATGGGCACAGC 60.125 61.111 0.00 0.00 41.91 4.40
326 327 0.392998 AAGTTCCGCTATGGGCACAG 60.393 55.000 0.00 0.00 41.91 3.66
327 328 0.676466 CAAGTTCCGCTATGGGCACA 60.676 55.000 0.00 0.00 41.91 4.57
328 329 1.376609 CCAAGTTCCGCTATGGGCAC 61.377 60.000 0.00 0.00 41.91 5.01
329 330 1.077787 CCAAGTTCCGCTATGGGCA 60.078 57.895 0.00 0.00 41.91 5.36
330 331 1.823899 CCCAAGTTCCGCTATGGGC 60.824 63.158 0.00 0.00 45.56 5.36
331 332 4.559502 CCCAAGTTCCGCTATGGG 57.440 61.111 0.00 0.00 46.07 4.00
332 333 0.034477 AACCCCAAGTTCCGCTATGG 60.034 55.000 0.00 0.00 30.99 2.74
333 334 1.094785 CAACCCCAAGTTCCGCTATG 58.905 55.000 0.00 0.00 36.18 2.23
334 335 0.696501 ACAACCCCAAGTTCCGCTAT 59.303 50.000 0.00 0.00 36.18 2.97
335 336 0.250553 CACAACCCCAAGTTCCGCTA 60.251 55.000 0.00 0.00 36.18 4.26
336 337 1.528309 CACAACCCCAAGTTCCGCT 60.528 57.895 0.00 0.00 36.18 5.52
337 338 0.535553 TACACAACCCCAAGTTCCGC 60.536 55.000 0.00 0.00 36.18 5.54
338 339 1.810151 CATACACAACCCCAAGTTCCG 59.190 52.381 0.00 0.00 36.18 4.30
339 340 2.817844 GACATACACAACCCCAAGTTCC 59.182 50.000 0.00 0.00 36.18 3.62
340 341 3.502211 CAGACATACACAACCCCAAGTTC 59.498 47.826 0.00 0.00 36.18 3.01
341 342 3.117663 ACAGACATACACAACCCCAAGTT 60.118 43.478 0.00 0.00 40.16 2.66
342 343 2.441750 ACAGACATACACAACCCCAAGT 59.558 45.455 0.00 0.00 0.00 3.16
343 344 3.140325 ACAGACATACACAACCCCAAG 57.860 47.619 0.00 0.00 0.00 3.61
344 345 3.586470 AACAGACATACACAACCCCAA 57.414 42.857 0.00 0.00 0.00 4.12
345 346 3.218453 CAAACAGACATACACAACCCCA 58.782 45.455 0.00 0.00 0.00 4.96
346 347 3.004315 CACAAACAGACATACACAACCCC 59.996 47.826 0.00 0.00 0.00 4.95
347 348 3.550030 GCACAAACAGACATACACAACCC 60.550 47.826 0.00 0.00 0.00 4.11
348 349 3.628017 GCACAAACAGACATACACAACC 58.372 45.455 0.00 0.00 0.00 3.77
349 350 3.242608 ACGCACAAACAGACATACACAAC 60.243 43.478 0.00 0.00 0.00 3.32
350 351 2.939756 ACGCACAAACAGACATACACAA 59.060 40.909 0.00 0.00 0.00 3.33
351 352 2.286563 CACGCACAAACAGACATACACA 59.713 45.455 0.00 0.00 0.00 3.72
352 353 2.286833 ACACGCACAAACAGACATACAC 59.713 45.455 0.00 0.00 0.00 2.90
353 354 2.556257 ACACGCACAAACAGACATACA 58.444 42.857 0.00 0.00 0.00 2.29
354 355 4.151689 ACATACACGCACAAACAGACATAC 59.848 41.667 0.00 0.00 0.00 2.39
355 356 4.151512 CACATACACGCACAAACAGACATA 59.848 41.667 0.00 0.00 0.00 2.29
356 357 3.058983 CACATACACGCACAAACAGACAT 60.059 43.478 0.00 0.00 0.00 3.06
357 358 2.286563 CACATACACGCACAAACAGACA 59.713 45.455 0.00 0.00 0.00 3.41
358 359 2.286833 ACACATACACGCACAAACAGAC 59.713 45.455 0.00 0.00 0.00 3.51
359 360 2.286563 CACACATACACGCACAAACAGA 59.713 45.455 0.00 0.00 0.00 3.41
360 361 2.601979 CCACACATACACGCACAAACAG 60.602 50.000 0.00 0.00 0.00 3.16
361 362 1.332065 CCACACATACACGCACAAACA 59.668 47.619 0.00 0.00 0.00 2.83
362 363 1.924191 GCCACACATACACGCACAAAC 60.924 52.381 0.00 0.00 0.00 2.93
363 364 0.309302 GCCACACATACACGCACAAA 59.691 50.000 0.00 0.00 0.00 2.83
364 365 0.815615 TGCCACACATACACGCACAA 60.816 50.000 0.00 0.00 0.00 3.33
365 366 1.227674 TGCCACACATACACGCACA 60.228 52.632 0.00 0.00 0.00 4.57
366 367 1.206578 GTGCCACACATACACGCAC 59.793 57.895 0.00 0.00 42.57 5.34
367 368 1.963855 GGTGCCACACATACACGCA 60.964 57.895 0.00 0.00 35.86 5.24
368 369 1.671054 AGGTGCCACACATACACGC 60.671 57.895 0.00 0.00 35.86 5.34
369 370 0.320334 TCAGGTGCCACACATACACG 60.320 55.000 0.00 0.00 35.86 4.49
370 371 1.156736 GTCAGGTGCCACACATACAC 58.843 55.000 0.00 0.00 35.86 2.90
371 372 1.055849 AGTCAGGTGCCACACATACA 58.944 50.000 0.00 0.00 35.86 2.29
372 373 1.806542 CAAGTCAGGTGCCACACATAC 59.193 52.381 0.00 0.00 35.86 2.39
373 374 1.881925 GCAAGTCAGGTGCCACACATA 60.882 52.381 0.00 0.00 35.86 2.29
374 375 1.174712 GCAAGTCAGGTGCCACACAT 61.175 55.000 0.00 0.00 35.86 3.21
375 376 1.823470 GCAAGTCAGGTGCCACACA 60.823 57.895 0.00 0.00 35.86 3.72
376 377 2.896801 CGCAAGTCAGGTGCCACAC 61.897 63.158 0.00 0.00 38.86 3.82
377 378 2.591429 CGCAAGTCAGGTGCCACA 60.591 61.111 0.00 0.00 38.86 4.17
378 379 3.357079 CCGCAAGTCAGGTGCCAC 61.357 66.667 0.00 0.00 38.86 5.01
379 380 3.872603 ACCGCAAGTCAGGTGCCA 61.873 61.111 0.00 0.00 39.66 4.92
383 384 4.988598 CGCCACCGCAAGTCAGGT 62.989 66.667 0.00 0.00 42.34 4.00
384 385 4.988598 ACGCCACCGCAAGTCAGG 62.989 66.667 0.00 0.00 38.22 3.86
385 386 2.972505 AACGCCACCGCAAGTCAG 60.973 61.111 0.00 0.00 38.22 3.51
386 387 3.276091 CAACGCCACCGCAAGTCA 61.276 61.111 0.00 0.00 38.22 3.41
387 388 3.276846 ACAACGCCACCGCAAGTC 61.277 61.111 0.00 0.00 38.22 3.01
388 389 3.582120 CACAACGCCACCGCAAGT 61.582 61.111 0.00 0.00 38.22 3.16
389 390 3.582120 ACACAACGCCACCGCAAG 61.582 61.111 0.00 0.00 38.22 4.01
390 391 3.882013 CACACAACGCCACCGCAA 61.882 61.111 0.00 0.00 38.22 4.85
392 393 4.605967 CACACACAACGCCACCGC 62.606 66.667 0.00 0.00 38.22 5.68
393 394 3.947841 CCACACACAACGCCACCG 61.948 66.667 0.00 0.00 41.14 4.94
394 395 3.591835 CCCACACACAACGCCACC 61.592 66.667 0.00 0.00 0.00 4.61
395 396 2.826738 ACCCACACACAACGCCAC 60.827 61.111 0.00 0.00 0.00 5.01
396 397 2.826287 CACCCACACACAACGCCA 60.826 61.111 0.00 0.00 0.00 5.69
397 398 2.826738 ACACCCACACACAACGCC 60.827 61.111 0.00 0.00 0.00 5.68
398 399 2.403378 ACACACCCACACACAACGC 61.403 57.895 0.00 0.00 0.00 4.84
399 400 1.427419 CACACACCCACACACAACG 59.573 57.895 0.00 0.00 0.00 4.10
400 401 1.138671 GCACACACCCACACACAAC 59.861 57.895 0.00 0.00 0.00 3.32
401 402 1.001517 AGCACACACCCACACACAA 60.002 52.632 0.00 0.00 0.00 3.33
402 403 1.748500 CAGCACACACCCACACACA 60.749 57.895 0.00 0.00 0.00 3.72
403 404 1.748879 ACAGCACACACCCACACAC 60.749 57.895 0.00 0.00 0.00 3.82
404 405 1.748500 CACAGCACACACCCACACA 60.749 57.895 0.00 0.00 0.00 3.72
405 406 1.312371 AACACAGCACACACCCACAC 61.312 55.000 0.00 0.00 0.00 3.82
406 407 1.001517 AACACAGCACACACCCACA 60.002 52.632 0.00 0.00 0.00 4.17
407 408 0.748005 AGAACACAGCACACACCCAC 60.748 55.000 0.00 0.00 0.00 4.61
408 409 0.747644 CAGAACACAGCACACACCCA 60.748 55.000 0.00 0.00 0.00 4.51
409 410 0.748005 ACAGAACACAGCACACACCC 60.748 55.000 0.00 0.00 0.00 4.61
410 411 0.657840 GACAGAACACAGCACACACC 59.342 55.000 0.00 0.00 0.00 4.16
411 412 0.301687 CGACAGAACACAGCACACAC 59.698 55.000 0.00 0.00 0.00 3.82
412 413 0.108377 ACGACAGAACACAGCACACA 60.108 50.000 0.00 0.00 0.00 3.72
413 414 1.006832 AACGACAGAACACAGCACAC 58.993 50.000 0.00 0.00 0.00 3.82
414 415 2.198406 GTAACGACAGAACACAGCACA 58.802 47.619 0.00 0.00 0.00 4.57
415 416 1.525619 GGTAACGACAGAACACAGCAC 59.474 52.381 0.00 0.00 0.00 4.40
416 417 1.411246 AGGTAACGACAGAACACAGCA 59.589 47.619 0.00 0.00 46.39 4.41
417 418 2.150397 AGGTAACGACAGAACACAGC 57.850 50.000 0.00 0.00 46.39 4.40
418 419 3.713288 TCAAGGTAACGACAGAACACAG 58.287 45.455 0.00 0.00 46.39 3.66
419 420 3.804786 TCAAGGTAACGACAGAACACA 57.195 42.857 0.00 0.00 46.39 3.72
420 421 5.467705 AGTATCAAGGTAACGACAGAACAC 58.532 41.667 0.00 0.00 46.39 3.32
421 422 5.717078 AGTATCAAGGTAACGACAGAACA 57.283 39.130 0.00 0.00 46.39 3.18
422 423 6.423001 ACAAAGTATCAAGGTAACGACAGAAC 59.577 38.462 0.00 0.00 46.39 3.01
423 424 6.422701 CACAAAGTATCAAGGTAACGACAGAA 59.577 38.462 0.00 0.00 46.39 3.02
424 425 5.924254 CACAAAGTATCAAGGTAACGACAGA 59.076 40.000 0.00 0.00 46.39 3.41
425 426 5.389516 GCACAAAGTATCAAGGTAACGACAG 60.390 44.000 0.00 0.00 46.39 3.51
426 427 4.449743 GCACAAAGTATCAAGGTAACGACA 59.550 41.667 0.00 0.00 46.39 4.35
427 428 4.689345 AGCACAAAGTATCAAGGTAACGAC 59.311 41.667 0.00 0.00 46.39 4.34
428 429 4.890088 AGCACAAAGTATCAAGGTAACGA 58.110 39.130 0.00 0.00 46.39 3.85
429 430 5.382303 CAAGCACAAAGTATCAAGGTAACG 58.618 41.667 0.00 0.00 46.39 3.18
430 431 5.240844 ACCAAGCACAAAGTATCAAGGTAAC 59.759 40.000 0.00 0.00 0.00 2.50
431 432 5.240623 CACCAAGCACAAAGTATCAAGGTAA 59.759 40.000 0.00 0.00 0.00 2.85
432 433 4.759693 CACCAAGCACAAAGTATCAAGGTA 59.240 41.667 0.00 0.00 0.00 3.08
433 434 3.569701 CACCAAGCACAAAGTATCAAGGT 59.430 43.478 0.00 0.00 0.00 3.50
434 435 3.057315 CCACCAAGCACAAAGTATCAAGG 60.057 47.826 0.00 0.00 0.00 3.61
435 436 3.057315 CCCACCAAGCACAAAGTATCAAG 60.057 47.826 0.00 0.00 0.00 3.02
436 437 2.890311 CCCACCAAGCACAAAGTATCAA 59.110 45.455 0.00 0.00 0.00 2.57
437 438 2.158534 ACCCACCAAGCACAAAGTATCA 60.159 45.455 0.00 0.00 0.00 2.15
438 439 2.228822 CACCCACCAAGCACAAAGTATC 59.771 50.000 0.00 0.00 0.00 2.24
439 440 2.238521 CACCCACCAAGCACAAAGTAT 58.761 47.619 0.00 0.00 0.00 2.12
440 441 1.686355 CACCCACCAAGCACAAAGTA 58.314 50.000 0.00 0.00 0.00 2.24
441 442 1.675720 GCACCCACCAAGCACAAAGT 61.676 55.000 0.00 0.00 0.00 2.66
442 443 1.067916 GCACCCACCAAGCACAAAG 59.932 57.895 0.00 0.00 0.00 2.77
443 444 0.975040 AAGCACCCACCAAGCACAAA 60.975 50.000 0.00 0.00 0.00 2.83
444 445 0.975040 AAAGCACCCACCAAGCACAA 60.975 50.000 0.00 0.00 0.00 3.33
445 446 0.106469 TAAAGCACCCACCAAGCACA 60.106 50.000 0.00 0.00 0.00 4.57
446 447 1.256812 ATAAAGCACCCACCAAGCAC 58.743 50.000 0.00 0.00 0.00 4.40
447 448 2.008242 AATAAAGCACCCACCAAGCA 57.992 45.000 0.00 0.00 0.00 3.91
448 449 4.736126 ATAAATAAAGCACCCACCAAGC 57.264 40.909 0.00 0.00 0.00 4.01
461 462 5.831702 TTTCGCCCCGCTTTATAAATAAA 57.168 34.783 0.00 0.00 0.00 1.40
462 463 5.450274 GGTTTTCGCCCCGCTTTATAAATAA 60.450 40.000 0.00 0.00 0.00 1.40
463 464 4.036616 GGTTTTCGCCCCGCTTTATAAATA 59.963 41.667 0.00 0.00 0.00 1.40
464 465 3.181484 GGTTTTCGCCCCGCTTTATAAAT 60.181 43.478 0.00 0.00 0.00 1.40
465 466 2.164017 GGTTTTCGCCCCGCTTTATAAA 59.836 45.455 0.00 0.00 0.00 1.40
466 467 1.744522 GGTTTTCGCCCCGCTTTATAA 59.255 47.619 0.00 0.00 0.00 0.98
467 468 1.065272 AGGTTTTCGCCCCGCTTTATA 60.065 47.619 0.00 0.00 0.00 0.98
468 469 0.323087 AGGTTTTCGCCCCGCTTTAT 60.323 50.000 0.00 0.00 0.00 1.40
469 470 0.537828 AAGGTTTTCGCCCCGCTTTA 60.538 50.000 0.00 0.00 0.00 1.85
470 471 1.396607 AAAGGTTTTCGCCCCGCTTT 61.397 50.000 0.00 0.00 0.00 3.51
471 472 1.396607 AAAAGGTTTTCGCCCCGCTT 61.397 50.000 0.00 0.00 0.00 4.68
472 473 1.396607 AAAAAGGTTTTCGCCCCGCT 61.397 50.000 0.00 0.00 0.00 5.52
473 474 0.942410 GAAAAAGGTTTTCGCCCCGC 60.942 55.000 0.00 0.00 0.00 6.13
474 475 0.662077 CGAAAAAGGTTTTCGCCCCG 60.662 55.000 19.26 1.16 43.52 5.73
475 476 3.188773 CGAAAAAGGTTTTCGCCCC 57.811 52.632 19.26 0.00 43.52 5.80
489 490 9.952030 TGGGCATATATACTCAAATTATCGAAA 57.048 29.630 0.00 0.00 0.00 3.46
490 491 9.378551 GTGGGCATATATACTCAAATTATCGAA 57.621 33.333 0.00 0.00 0.00 3.71
491 492 7.985184 GGTGGGCATATATACTCAAATTATCGA 59.015 37.037 0.00 0.00 0.00 3.59
492 493 7.987458 AGGTGGGCATATATACTCAAATTATCG 59.013 37.037 0.00 0.00 0.00 2.92
493 494 9.113838 CAGGTGGGCATATATACTCAAATTATC 57.886 37.037 0.00 0.00 0.00 1.75
494 495 8.614814 ACAGGTGGGCATATATACTCAAATTAT 58.385 33.333 0.00 0.00 0.00 1.28
495 496 7.984475 ACAGGTGGGCATATATACTCAAATTA 58.016 34.615 0.00 0.00 0.00 1.40
496 497 6.852404 ACAGGTGGGCATATATACTCAAATT 58.148 36.000 0.00 0.00 0.00 1.82
497 498 6.454223 ACAGGTGGGCATATATACTCAAAT 57.546 37.500 0.00 0.00 0.00 2.32
498 499 5.904984 ACAGGTGGGCATATATACTCAAA 57.095 39.130 0.00 0.00 0.00 2.69
499 500 5.620206 CAACAGGTGGGCATATATACTCAA 58.380 41.667 0.00 0.00 0.00 3.02
500 501 4.504864 GCAACAGGTGGGCATATATACTCA 60.505 45.833 0.00 0.00 0.00 3.41
501 502 4.003648 GCAACAGGTGGGCATATATACTC 58.996 47.826 0.00 0.00 0.00 2.59
502 503 3.394274 TGCAACAGGTGGGCATATATACT 59.606 43.478 0.00 0.00 31.58 2.12
503 504 3.750371 TGCAACAGGTGGGCATATATAC 58.250 45.455 0.00 0.00 31.58 1.47
505 506 3.159472 CATGCAACAGGTGGGCATATAT 58.841 45.455 10.32 0.00 45.81 0.86
512 513 2.601067 TGCCATGCAACAGGTGGG 60.601 61.111 5.47 0.00 34.76 4.61
514 515 2.260434 GCTGCCATGCAACAGGTG 59.740 61.111 14.37 0.00 38.41 4.00
522 523 3.508793 ACATATCATAAAGGCTGCCATGC 59.491 43.478 22.65 0.00 0.00 4.06
523 524 5.717078 AACATATCATAAAGGCTGCCATG 57.283 39.130 22.65 15.72 0.00 3.66
527 528 8.043710 AGTAGGATAACATATCATAAAGGCTGC 58.956 37.037 0.00 0.00 0.00 5.25
536 537 8.138928 TGCAAGCTAGTAGGATAACATATCAT 57.861 34.615 0.00 0.00 0.00 2.45
537 538 7.539034 TGCAAGCTAGTAGGATAACATATCA 57.461 36.000 0.00 0.00 0.00 2.15
538 539 8.833231 TTTGCAAGCTAGTAGGATAACATATC 57.167 34.615 0.00 0.00 0.00 1.63
539 540 9.224267 CATTTGCAAGCTAGTAGGATAACATAT 57.776 33.333 0.00 0.00 0.00 1.78
569 570 1.975660 TACCACAAACAGAACCCTGC 58.024 50.000 0.00 0.00 44.16 4.85
570 571 3.697045 TGTTTACCACAAACAGAACCCTG 59.303 43.478 0.00 0.00 38.27 4.45
571 572 3.970842 TGTTTACCACAAACAGAACCCT 58.029 40.909 0.00 0.00 35.45 4.34
599 1610 6.980416 ACTACAGTAGAAGTTGGGATATCC 57.020 41.667 13.87 13.87 0.00 2.59
602 1613 9.092338 TGTAAAACTACAGTAGAAGTTGGGATA 57.908 33.333 14.94 0.00 36.12 2.59
606 1617 8.428186 TTGTGTAAAACTACAGTAGAAGTTGG 57.572 34.615 14.94 0.00 36.12 3.77
607 1618 9.095065 ACTTGTGTAAAACTACAGTAGAAGTTG 57.905 33.333 14.94 0.00 36.12 3.16
612 1623 8.696043 TCCTACTTGTGTAAAACTACAGTAGA 57.304 34.615 14.94 0.00 34.33 2.59
615 1626 9.086758 AGTATCCTACTTGTGTAAAACTACAGT 57.913 33.333 0.00 0.00 34.86 3.55
632 1643 5.604758 ACCCCGAAAAAGTAGTATCCTAC 57.395 43.478 0.00 0.00 43.32 3.18
634 1645 5.025453 TGTACCCCGAAAAAGTAGTATCCT 58.975 41.667 0.00 0.00 0.00 3.24
635 1646 5.343307 TGTACCCCGAAAAAGTAGTATCC 57.657 43.478 0.00 0.00 0.00 2.59
636 1647 6.633856 TCTTGTACCCCGAAAAAGTAGTATC 58.366 40.000 0.00 0.00 0.00 2.24
637 1648 6.212187 ACTCTTGTACCCCGAAAAAGTAGTAT 59.788 38.462 0.00 0.00 0.00 2.12
639 1650 4.346127 ACTCTTGTACCCCGAAAAAGTAGT 59.654 41.667 0.00 0.00 0.00 2.73
641 1652 4.961438 ACTCTTGTACCCCGAAAAAGTA 57.039 40.909 0.00 0.00 0.00 2.24
642 1653 3.851458 ACTCTTGTACCCCGAAAAAGT 57.149 42.857 0.00 0.00 0.00 2.66
643 1654 4.020839 TCCTACTCTTGTACCCCGAAAAAG 60.021 45.833 0.00 0.00 0.00 2.27
644 1655 3.903090 TCCTACTCTTGTACCCCGAAAAA 59.097 43.478 0.00 0.00 0.00 1.94
646 1657 3.173953 TCCTACTCTTGTACCCCGAAA 57.826 47.619 0.00 0.00 0.00 3.46
647 1658 2.905415 TCCTACTCTTGTACCCCGAA 57.095 50.000 0.00 0.00 0.00 4.30
648 1659 4.736611 ATATCCTACTCTTGTACCCCGA 57.263 45.455 0.00 0.00 0.00 5.14
649 1660 8.630917 CATTATATATCCTACTCTTGTACCCCG 58.369 40.741 0.00 0.00 0.00 5.73
683 1986 0.108585 ACGAGTGGTGCAAGTGGAAT 59.891 50.000 0.00 0.00 0.00 3.01
686 1989 0.532862 AGAACGAGTGGTGCAAGTGG 60.533 55.000 0.00 0.00 0.00 4.00
691 1994 3.068448 TGTTACTAAGAACGAGTGGTGCA 59.932 43.478 0.00 0.00 31.59 4.57
705 2008 4.879545 GGAAATCAATCCGGCTGTTACTAA 59.120 41.667 0.00 0.00 0.00 2.24
711 2014 2.514458 AAGGAAATCAATCCGGCTGT 57.486 45.000 0.00 0.00 44.60 4.40
719 2056 3.279434 GTCGGCAGGTAAGGAAATCAAT 58.721 45.455 0.00 0.00 0.00 2.57
777 2116 0.174845 ATACGCGGCACTAAGCTTGA 59.825 50.000 12.47 0.00 44.79 3.02
834 2190 3.426568 GAGTCAACCAGCTGCCGC 61.427 66.667 8.66 0.00 0.00 6.53
897 2260 1.141234 GTCTCGATCACGGGGGAAC 59.859 63.158 0.00 0.00 40.79 3.62
958 2321 0.958091 CTCTTGCTCGATCGAGGGAT 59.042 55.000 38.18 0.00 42.19 3.85
994 2363 1.252904 GCAAGCTTGGCCATCTTCCA 61.253 55.000 27.10 0.00 0.00 3.53
1215 2650 1.462627 AGAAGAAACCGGTGGGGGA 60.463 57.895 8.52 0.00 41.60 4.81
1247 4469 4.326227 TAGCCGGTGGAGGTGGGT 62.326 66.667 1.90 0.00 37.28 4.51
1506 4747 9.201989 CAACTAGGCCTATATATCAATCCTGTA 57.798 37.037 14.30 0.00 0.00 2.74
1508 4749 7.984050 CACAACTAGGCCTATATATCAATCCTG 59.016 40.741 14.30 0.00 0.00 3.86
1880 5178 1.336755 GCGAACATTTGTGTGAGGGTT 59.663 47.619 0.00 0.00 0.00 4.11
1903 5201 0.955919 GGTTTGGCTGAGTCCCTTCG 60.956 60.000 0.00 0.00 0.00 3.79
2353 5651 2.093447 GGAGAGATGATCAACCGGTGTT 60.093 50.000 8.52 0.00 34.14 3.32
2964 7845 5.009210 GTCTCAGTCGATGCTATAGTCCTTT 59.991 44.000 0.84 0.00 0.00 3.11
3048 8371 7.815840 TGATTTGGAGAAGTGTAATTTCACA 57.184 32.000 16.34 0.00 40.37 3.58
3092 8415 1.349026 CCCTCTTTCTCTCACCAAGCA 59.651 52.381 0.00 0.00 0.00 3.91
3140 8463 2.202676 CGAGAAGAGGGCGACAGC 60.203 66.667 0.00 0.00 44.18 4.40
3149 8472 1.431440 CTGGGCGAGACGAGAAGAG 59.569 63.158 0.00 0.00 0.00 2.85
3226 8549 3.582164 AGACCTTCACTCAAACCTCTCT 58.418 45.455 0.00 0.00 0.00 3.10
3269 8593 3.726517 CCAGCTTCACCAACGCCG 61.727 66.667 0.00 0.00 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.