Multiple sequence alignment - TraesCS2D01G152400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G152400 chr2D 100.000 3093 0 0 1 3093 95514869 95517961 0.000000e+00 5712.0
1 TraesCS2D01G152400 chr2D 74.088 795 173 27 1303 2092 95645055 95645821 2.330000e-76 296.0
2 TraesCS2D01G152400 chr2D 95.758 165 7 0 2458 2622 131382857 131383021 1.830000e-67 267.0
3 TraesCS2D01G152400 chr2D 93.902 164 10 0 2460 2623 114218301 114218138 6.620000e-62 248.0
4 TraesCS2D01G152400 chr2B 90.622 2474 134 40 46 2459 146962962 146965397 0.000000e+00 3193.0
5 TraesCS2D01G152400 chr2B 74.874 796 165 28 1303 2092 146992844 146993610 2.300000e-86 329.0
6 TraesCS2D01G152400 chr2B 91.667 180 11 4 2453 2630 729188110 729187933 2.380000e-61 246.0
7 TraesCS2D01G152400 chr2B 74.699 166 30 9 65 223 476415025 476415185 2.570000e-06 63.9
8 TraesCS2D01G152400 chr2A 88.962 2419 127 53 1 2367 94106973 94109303 0.000000e+00 2859.0
9 TraesCS2D01G152400 chr2A 77.660 94 21 0 1448 1541 94318182 94318275 1.200000e-04 58.4
10 TraesCS2D01G152400 chr7A 75.733 750 140 33 1303 2040 57864379 57865098 3.820000e-89 339.0
11 TraesCS2D01G152400 chr7A 74.502 804 162 31 1301 2095 574754116 574754885 3.000000e-80 309.0
12 TraesCS2D01G152400 chr7A 74.349 807 157 38 1301 2094 574971719 574972488 6.480000e-77 298.0
13 TraesCS2D01G152400 chr7A 74.255 738 154 28 1303 2031 57802972 57803682 8.450000e-71 278.0
14 TraesCS2D01G152400 chr7A 89.831 59 5 1 1162 1220 669727976 669728033 1.190000e-09 75.0
15 TraesCS2D01G152400 chr7A 89.583 48 5 0 180 227 150914725 150914678 9.260000e-06 62.1
16 TraesCS2D01G152400 chr7A 90.698 43 2 2 191 232 138182706 138182665 4.310000e-04 56.5
17 TraesCS2D01G152400 chr7D 74.157 801 167 32 1302 2094 506882895 506883663 2.330000e-76 296.0
18 TraesCS2D01G152400 chr7D 74.093 799 166 31 1303 2091 54319681 54320448 1.090000e-74 291.0
19 TraesCS2D01G152400 chr7D 74.000 800 165 32 1303 2091 54353773 54354540 5.050000e-73 285.0
20 TraesCS2D01G152400 chr7D 72.875 800 174 33 1303 2091 54336592 54337359 5.160000e-58 235.0
21 TraesCS2D01G152400 chr7D 88.136 59 6 1 1162 1220 577594982 577595039 5.530000e-08 69.4
22 TraesCS2D01G152400 chr7B 74.134 808 163 31 1302 2099 535614588 535615359 3.020000e-75 292.0
23 TraesCS2D01G152400 chr7B 88.542 192 18 4 2461 2650 650608931 650609120 2.400000e-56 230.0
24 TraesCS2D01G152400 chr7B 88.136 59 6 1 1162 1220 640915040 640915097 5.530000e-08 69.4
25 TraesCS2D01G152400 chr7B 96.970 33 1 0 191 223 138750991 138750959 4.310000e-04 56.5
26 TraesCS2D01G152400 chr3A 73.618 796 175 24 1303 2091 628219906 628219139 1.090000e-69 274.0
27 TraesCS2D01G152400 chr3D 73.469 784 165 29 1303 2075 485232117 485231366 3.960000e-64 255.0
28 TraesCS2D01G152400 chr3D 92.899 169 10 2 2457 2624 445035724 445035557 8.570000e-61 244.0
29 TraesCS2D01G152400 chr3D 85.455 55 6 1 191 243 74763767 74763713 4.310000e-04 56.5
30 TraesCS2D01G152400 chr5B 92.442 172 12 1 2458 2629 712462369 712462199 8.570000e-61 244.0
31 TraesCS2D01G152400 chr5B 75.000 148 25 10 85 222 13075962 13076107 1.200000e-04 58.4
32 TraesCS2D01G152400 chr5B 89.130 46 5 0 177 222 13077751 13077706 1.200000e-04 58.4
33 TraesCS2D01G152400 chr4D 92.899 169 11 1 2454 2622 437295759 437295926 8.570000e-61 244.0
34 TraesCS2D01G152400 chr6B 91.908 173 11 3 2460 2630 132353578 132353407 3.990000e-59 239.0
35 TraesCS2D01G152400 chr6B 85.938 64 7 2 181 242 499573336 499573273 1.990000e-07 67.6
36 TraesCS2D01G152400 chr5D 89.529 191 16 4 2441 2629 230416812 230417000 3.990000e-59 239.0
37 TraesCS2D01G152400 chr1D 75.059 425 81 19 1299 1709 62858206 62858619 1.140000e-39 174.0
38 TraesCS2D01G152400 chr4B 73.767 446 77 30 1077 1492 641407790 641408225 4.160000e-29 139.0
39 TraesCS2D01G152400 chr1A 74.595 185 34 11 65 242 312722363 312722541 5.530000e-08 69.4
40 TraesCS2D01G152400 chr1A 100.000 28 0 0 86 113 58425136 58425163 6.000000e-03 52.8
41 TraesCS2D01G152400 chr6D 74.233 163 33 7 86 242 461360069 461359910 3.330000e-05 60.2
42 TraesCS2D01G152400 chr3B 91.892 37 3 0 196 232 520334071 520334035 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G152400 chr2D 95514869 95517961 3092 False 5712 5712 100.000 1 3093 1 chr2D.!!$F1 3092
1 TraesCS2D01G152400 chr2D 95645055 95645821 766 False 296 296 74.088 1303 2092 1 chr2D.!!$F2 789
2 TraesCS2D01G152400 chr2B 146962962 146965397 2435 False 3193 3193 90.622 46 2459 1 chr2B.!!$F1 2413
3 TraesCS2D01G152400 chr2B 146992844 146993610 766 False 329 329 74.874 1303 2092 1 chr2B.!!$F2 789
4 TraesCS2D01G152400 chr2A 94106973 94109303 2330 False 2859 2859 88.962 1 2367 1 chr2A.!!$F1 2366
5 TraesCS2D01G152400 chr7A 57864379 57865098 719 False 339 339 75.733 1303 2040 1 chr7A.!!$F2 737
6 TraesCS2D01G152400 chr7A 574754116 574754885 769 False 309 309 74.502 1301 2095 1 chr7A.!!$F3 794
7 TraesCS2D01G152400 chr7A 574971719 574972488 769 False 298 298 74.349 1301 2094 1 chr7A.!!$F4 793
8 TraesCS2D01G152400 chr7A 57802972 57803682 710 False 278 278 74.255 1303 2031 1 chr7A.!!$F1 728
9 TraesCS2D01G152400 chr7D 506882895 506883663 768 False 296 296 74.157 1302 2094 1 chr7D.!!$F4 792
10 TraesCS2D01G152400 chr7D 54319681 54320448 767 False 291 291 74.093 1303 2091 1 chr7D.!!$F1 788
11 TraesCS2D01G152400 chr7D 54353773 54354540 767 False 285 285 74.000 1303 2091 1 chr7D.!!$F3 788
12 TraesCS2D01G152400 chr7D 54336592 54337359 767 False 235 235 72.875 1303 2091 1 chr7D.!!$F2 788
13 TraesCS2D01G152400 chr7B 535614588 535615359 771 False 292 292 74.134 1302 2099 1 chr7B.!!$F1 797
14 TraesCS2D01G152400 chr3A 628219139 628219906 767 True 274 274 73.618 1303 2091 1 chr3A.!!$R1 788
15 TraesCS2D01G152400 chr3D 485231366 485232117 751 True 255 255 73.469 1303 2075 1 chr3D.!!$R3 772

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
830 848 0.034337 TGAAGGGTCGTTGTAGCCAC 59.966 55.0 0.0 0.0 39.59 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2748 2856 0.321653 ATTGCCTCCGTCACTTCCAC 60.322 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.161404 TGCTTGTATCATGGACTATATGGAAC 58.839 38.462 0.00 0.00 0.00 3.62
84 90 7.927629 ACAATTTTGCTAAACAACATCATGACT 59.072 29.630 0.00 0.00 38.23 3.41
131 137 1.275573 AGCGAAGAGGTTAGGGTGAAC 59.724 52.381 0.00 0.00 0.00 3.18
142 148 3.400590 GGTGAACCGTGTCGCGAC 61.401 66.667 31.66 31.66 44.77 5.19
167 173 4.955925 AATAATTCATGTCGCGTTTGGA 57.044 36.364 5.77 0.00 0.00 3.53
187 193 8.357402 GTTTGGATGGTTTGTAACAAACTCTAT 58.643 33.333 2.63 0.00 42.41 1.98
211 217 8.632906 ATGCTCTTCTTAATTAATGGATGAGG 57.367 34.615 20.36 8.68 33.48 3.86
212 218 7.577303 TGCTCTTCTTAATTAATGGATGAGGT 58.423 34.615 20.36 0.00 33.48 3.85
227 233 8.655935 ATGGATGAGGTAAATCTTTTGTTTCT 57.344 30.769 0.00 0.00 0.00 2.52
268 276 1.065345 TGAACTCCGTCAAACCACCAA 60.065 47.619 0.00 0.00 0.00 3.67
275 283 2.032924 CCGTCAAACCACCAAAGTTCTC 59.967 50.000 0.00 0.00 0.00 2.87
332 340 5.878406 ATTCAGATATCAGAACCTTCGGT 57.122 39.130 12.25 0.00 37.65 4.69
376 388 0.736053 TGTCACGCCTGTTTTGTTCC 59.264 50.000 0.00 0.00 0.00 3.62
381 393 1.206115 CGCCTGTTTTGTTCCGTTGC 61.206 55.000 0.00 0.00 0.00 4.17
532 547 1.467342 ACGCGCTAATTTTGTTCTCCC 59.533 47.619 5.73 0.00 0.00 4.30
618 636 1.021390 ATGTTCTAGCCACGCACTGC 61.021 55.000 0.00 0.00 0.00 4.40
650 668 7.129109 TCAGTTGACATAAAGAATTCCGAAC 57.871 36.000 0.65 0.00 0.00 3.95
741 759 1.798813 CGTTGAAGTTGCCAGTAGGTC 59.201 52.381 0.00 0.00 37.19 3.85
797 815 1.134788 GTGCCTACAGCTCGGTAACAT 60.135 52.381 0.00 0.00 44.23 2.71
830 848 0.034337 TGAAGGGTCGTTGTAGCCAC 59.966 55.000 0.00 0.00 39.59 5.01
831 849 0.672711 GAAGGGTCGTTGTAGCCACC 60.673 60.000 0.00 0.00 39.59 4.61
960 989 3.532155 CTCGGCTTAGCTCGGCCT 61.532 66.667 22.13 0.00 45.57 5.19
961 990 3.492311 CTCGGCTTAGCTCGGCCTC 62.492 68.421 22.13 3.55 45.57 4.70
962 991 4.933064 CGGCTTAGCTCGGCCTCG 62.933 72.222 22.13 10.36 45.57 4.63
963 992 4.593864 GGCTTAGCTCGGCCTCGG 62.594 72.222 18.96 0.00 44.48 4.63
964 993 4.593864 GCTTAGCTCGGCCTCGGG 62.594 72.222 0.00 0.00 40.45 5.14
965 994 2.833582 CTTAGCTCGGCCTCGGGA 60.834 66.667 0.00 0.00 39.73 5.14
966 995 2.833582 TTAGCTCGGCCTCGGGAG 60.834 66.667 0.00 0.24 39.73 4.30
984 1013 3.808656 GCCTCGGAAGCAGCAAGC 61.809 66.667 0.00 0.00 46.19 4.01
1279 1347 0.457853 TACTCGCATTGCTCGGTGAC 60.458 55.000 7.12 0.00 0.00 3.67
1732 1824 4.471726 GACCGCACGGACGTCGAT 62.472 66.667 17.40 0.00 42.43 3.59
1819 1914 1.738099 CACCGACGGAAAGGAGCAG 60.738 63.158 23.38 0.00 0.00 4.24
1824 1919 2.125512 CGGAAAGGAGCAGGACGG 60.126 66.667 0.00 0.00 0.00 4.79
2111 2206 1.065551 GAAAGCCATGAACGTATGGGC 59.934 52.381 17.13 14.17 46.23 5.36
2113 2208 2.542907 GCCATGAACGTATGGGCCG 61.543 63.158 17.13 0.00 46.23 6.13
2115 2210 1.891919 CATGAACGTATGGGCCGGG 60.892 63.158 2.18 0.00 0.00 5.73
2116 2211 3.114825 ATGAACGTATGGGCCGGGG 62.115 63.158 2.18 0.00 0.00 5.73
2117 2212 3.789290 GAACGTATGGGCCGGGGT 61.789 66.667 2.18 0.00 0.00 4.95
2118 2213 3.745240 GAACGTATGGGCCGGGGTC 62.745 68.421 2.18 0.00 0.00 4.46
2121 2216 3.789290 GTATGGGCCGGGGTCGTT 61.789 66.667 2.18 0.00 33.95 3.85
2122 2217 3.788145 TATGGGCCGGGGTCGTTG 61.788 66.667 2.18 0.00 33.95 4.10
2141 2236 2.400962 TGCTGTGCATGCGTCCATC 61.401 57.895 14.09 6.01 31.71 3.51
2164 2263 1.633432 TCCATGATTTGTCCCGTTCCT 59.367 47.619 0.00 0.00 0.00 3.36
2167 2266 1.890876 TGATTTGTCCCGTTCCTGTG 58.109 50.000 0.00 0.00 0.00 3.66
2168 2267 0.521735 GATTTGTCCCGTTCCTGTGC 59.478 55.000 0.00 0.00 0.00 4.57
2169 2268 0.179004 ATTTGTCCCGTTCCTGTGCA 60.179 50.000 0.00 0.00 0.00 4.57
2170 2269 0.817634 TTTGTCCCGTTCCTGTGCAG 60.818 55.000 0.00 0.00 0.00 4.41
2172 2271 3.555324 TCCCGTTCCTGTGCAGCA 61.555 61.111 0.00 0.00 0.00 4.41
2173 2272 2.360350 CCCGTTCCTGTGCAGCAT 60.360 61.111 0.00 0.00 0.00 3.79
2175 2274 0.676466 CCCGTTCCTGTGCAGCATTA 60.676 55.000 0.00 0.00 0.00 1.90
2225 2333 3.175240 CGAGCTTGCCGTCTCGTG 61.175 66.667 9.52 0.00 44.95 4.35
2228 2336 3.414700 GCTTGCCGTCTCGTGTGG 61.415 66.667 0.00 0.00 0.00 4.17
2237 2345 1.337821 GTCTCGTGTGGTGATTCGTC 58.662 55.000 0.00 0.00 0.00 4.20
2327 2435 2.029828 ACTTCTGAATTCTGACGCTCGT 60.030 45.455 13.97 0.00 0.00 4.18
2338 2446 0.517316 GACGCTCGTTCTTTGGCAAT 59.483 50.000 0.00 0.00 0.00 3.56
2342 2450 1.269448 GCTCGTTCTTTGGCAATGGAA 59.731 47.619 12.54 11.51 0.00 3.53
2352 2460 6.622833 CTTTGGCAATGGAAAACAAAGAAT 57.377 33.333 0.00 0.00 46.58 2.40
2353 2461 7.030075 CTTTGGCAATGGAAAACAAAGAATT 57.970 32.000 0.00 0.00 46.58 2.17
2354 2462 8.152309 CTTTGGCAATGGAAAACAAAGAATTA 57.848 30.769 0.00 0.00 46.58 1.40
2355 2463 7.489574 TTGGCAATGGAAAACAAAGAATTAC 57.510 32.000 0.00 0.00 0.00 1.89
2357 2465 7.278875 TGGCAATGGAAAACAAAGAATTACTT 58.721 30.769 0.00 0.00 40.98 2.24
2359 2467 7.071414 GCAATGGAAAACAAAGAATTACTTGC 58.929 34.615 0.00 0.00 38.98 4.01
2361 2469 5.897050 TGGAAAACAAAGAATTACTTGCGT 58.103 33.333 0.05 0.00 38.98 5.24
2363 2471 5.332280 GGAAAACAAAGAATTACTTGCGTGC 60.332 40.000 0.05 0.00 38.98 5.34
2364 2472 4.568152 AACAAAGAATTACTTGCGTGCT 57.432 36.364 0.00 0.00 38.98 4.40
2365 2473 4.147219 ACAAAGAATTACTTGCGTGCTC 57.853 40.909 0.00 0.00 38.98 4.26
2366 2474 3.815401 ACAAAGAATTACTTGCGTGCTCT 59.185 39.130 0.00 0.00 38.98 4.09
2367 2475 4.153986 CAAAGAATTACTTGCGTGCTCTG 58.846 43.478 0.00 0.00 38.98 3.35
2368 2476 1.734465 AGAATTACTTGCGTGCTCTGC 59.266 47.619 0.00 0.00 0.00 4.26
2369 2477 1.734465 GAATTACTTGCGTGCTCTGCT 59.266 47.619 0.00 0.00 0.00 4.24
2378 2486 2.047844 TGCTCTGCTTGCGTCTCC 60.048 61.111 0.00 0.00 0.00 3.71
2380 2488 2.125350 CTCTGCTTGCGTCTCCCC 60.125 66.667 0.00 0.00 0.00 4.81
2409 2517 2.356313 CGCTGCTCCAGTTGTCGT 60.356 61.111 0.00 0.00 33.43 4.34
2438 2546 1.555075 ACCTCATGTGTGATAACCGCT 59.445 47.619 0.00 0.00 32.98 5.52
2439 2547 1.935873 CCTCATGTGTGATAACCGCTG 59.064 52.381 0.00 0.00 32.98 5.18
2441 2549 2.862536 CTCATGTGTGATAACCGCTGAG 59.137 50.000 0.00 0.00 32.98 3.35
2447 2555 4.759693 TGTGTGATAACCGCTGAGAAAAAT 59.240 37.500 0.00 0.00 0.00 1.82
2459 2567 6.088085 CCGCTGAGAAAAATGTGACAAATAAC 59.912 38.462 0.00 0.00 0.00 1.89
2460 2568 6.857964 CGCTGAGAAAAATGTGACAAATAACT 59.142 34.615 0.00 0.00 0.00 2.24
2461 2569 8.015087 CGCTGAGAAAAATGTGACAAATAACTA 58.985 33.333 0.00 0.00 0.00 2.24
2462 2570 9.118236 GCTGAGAAAAATGTGACAAATAACTAC 57.882 33.333 0.00 0.00 0.00 2.73
2470 2578 7.596749 ATGTGACAAATAACTACTTCTTCCG 57.403 36.000 0.00 0.00 0.00 4.30
2471 2579 6.518493 TGTGACAAATAACTACTTCTTCCGT 58.482 36.000 0.00 0.00 0.00 4.69
2472 2580 6.987992 TGTGACAAATAACTACTTCTTCCGTT 59.012 34.615 0.00 0.00 0.00 4.44
2473 2581 7.170320 TGTGACAAATAACTACTTCTTCCGTTC 59.830 37.037 0.00 0.00 0.00 3.95
2474 2582 6.647895 TGACAAATAACTACTTCTTCCGTTCC 59.352 38.462 0.00 0.00 0.00 3.62
2475 2583 6.766429 ACAAATAACTACTTCTTCCGTTCCT 58.234 36.000 0.00 0.00 0.00 3.36
2476 2584 7.899973 ACAAATAACTACTTCTTCCGTTCCTA 58.100 34.615 0.00 0.00 0.00 2.94
2477 2585 8.370182 ACAAATAACTACTTCTTCCGTTCCTAA 58.630 33.333 0.00 0.00 0.00 2.69
2478 2586 9.211485 CAAATAACTACTTCTTCCGTTCCTAAA 57.789 33.333 0.00 0.00 0.00 1.85
2479 2587 9.955102 AAATAACTACTTCTTCCGTTCCTAAAT 57.045 29.630 0.00 0.00 0.00 1.40
2487 2595 8.979534 ACTTCTTCCGTTCCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
2488 2596 9.819267 CTTCTTCCGTTCCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
2521 2629 9.311916 GATTCCATTATGATCTACATACAGAGC 57.688 37.037 0.00 0.00 40.62 4.09
2522 2630 7.781324 TCCATTATGATCTACATACAGAGCA 57.219 36.000 0.00 0.00 44.43 4.26
2523 2631 8.193953 TCCATTATGATCTACATACAGAGCAA 57.806 34.615 0.00 0.00 43.61 3.91
2524 2632 8.650490 TCCATTATGATCTACATACAGAGCAAA 58.350 33.333 0.00 0.00 43.61 3.68
2525 2633 9.276590 CCATTATGATCTACATACAGAGCAAAA 57.723 33.333 0.00 0.00 43.61 2.44
2529 2637 8.604640 ATGATCTACATACAGAGCAAAATGAG 57.395 34.615 0.00 0.00 43.61 2.90
2530 2638 7.559486 TGATCTACATACAGAGCAAAATGAGT 58.441 34.615 0.00 0.00 37.98 3.41
2531 2639 7.493645 TGATCTACATACAGAGCAAAATGAGTG 59.506 37.037 0.00 0.00 37.98 3.51
2532 2640 6.935167 TCTACATACAGAGCAAAATGAGTGA 58.065 36.000 0.00 0.00 0.00 3.41
2533 2641 7.386059 TCTACATACAGAGCAAAATGAGTGAA 58.614 34.615 0.00 0.00 0.00 3.18
2534 2642 8.043113 TCTACATACAGAGCAAAATGAGTGAAT 58.957 33.333 0.00 0.00 0.00 2.57
2535 2643 7.081526 ACATACAGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
2536 2644 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
2537 2645 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
2538 2646 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
2539 2647 6.233434 ACAGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
2540 2648 6.148480 ACAGAGCAAAATGAGTGAATCTACAC 59.852 38.462 0.00 0.00 40.60 2.90
2583 2691 6.880484 ACATCCGTATGTAGTTTGTAATGGA 58.120 36.000 0.00 0.00 44.66 3.41
2584 2692 7.332557 ACATCCGTATGTAGTTTGTAATGGAA 58.667 34.615 0.00 0.00 44.66 3.53
2585 2693 7.990886 ACATCCGTATGTAGTTTGTAATGGAAT 59.009 33.333 0.00 0.00 44.66 3.01
2586 2694 8.495949 CATCCGTATGTAGTTTGTAATGGAATC 58.504 37.037 0.00 0.00 0.00 2.52
2587 2695 6.987992 TCCGTATGTAGTTTGTAATGGAATCC 59.012 38.462 0.00 0.00 0.00 3.01
2588 2696 6.204108 CCGTATGTAGTTTGTAATGGAATCCC 59.796 42.308 0.00 0.00 0.00 3.85
2589 2697 6.990349 CGTATGTAGTTTGTAATGGAATCCCT 59.010 38.462 0.00 0.00 0.00 4.20
2590 2698 8.145767 CGTATGTAGTTTGTAATGGAATCCCTA 58.854 37.037 0.00 0.00 0.00 3.53
2591 2699 9.841295 GTATGTAGTTTGTAATGGAATCCCTAA 57.159 33.333 0.00 0.00 0.00 2.69
2593 2701 9.762381 ATGTAGTTTGTAATGGAATCCCTAAAA 57.238 29.630 0.00 0.00 0.00 1.52
2594 2702 9.589461 TGTAGTTTGTAATGGAATCCCTAAAAA 57.411 29.630 0.00 0.00 0.00 1.94
2596 2704 8.950007 AGTTTGTAATGGAATCCCTAAAAAGA 57.050 30.769 0.00 0.00 0.00 2.52
2597 2705 8.803235 AGTTTGTAATGGAATCCCTAAAAAGAC 58.197 33.333 0.00 0.00 0.00 3.01
2598 2706 8.803235 GTTTGTAATGGAATCCCTAAAAAGACT 58.197 33.333 0.00 0.00 0.00 3.24
2599 2707 8.950007 TTGTAATGGAATCCCTAAAAAGACTT 57.050 30.769 0.00 0.00 0.00 3.01
2617 2725 9.907229 AAAAGACTTATATTTAGGAACAGAGGG 57.093 33.333 0.00 0.00 0.00 4.30
2618 2726 8.855804 AAGACTTATATTTAGGAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
2619 2727 8.485578 AGACTTATATTTAGGAACAGAGGGAG 57.514 38.462 0.00 0.00 0.00 4.30
2620 2728 8.068733 AGACTTATATTTAGGAACAGAGGGAGT 58.931 37.037 0.00 0.00 0.00 3.85
2621 2729 9.364653 GACTTATATTTAGGAACAGAGGGAGTA 57.635 37.037 0.00 0.00 0.00 2.59
2622 2730 9.900112 ACTTATATTTAGGAACAGAGGGAGTAT 57.100 33.333 0.00 0.00 0.00 2.12
2626 2734 9.845214 ATATTTAGGAACAGAGGGAGTATACAT 57.155 33.333 5.50 0.00 0.00 2.29
2627 2735 7.989947 TTTAGGAACAGAGGGAGTATACATT 57.010 36.000 5.50 0.00 0.00 2.71
2628 2736 9.670442 ATTTAGGAACAGAGGGAGTATACATTA 57.330 33.333 5.50 0.00 0.00 1.90
2629 2737 9.670442 TTTAGGAACAGAGGGAGTATACATTAT 57.330 33.333 5.50 0.00 0.00 1.28
2630 2738 9.670442 TTAGGAACAGAGGGAGTATACATTATT 57.330 33.333 5.50 0.00 0.00 1.40
2632 2740 9.845214 AGGAACAGAGGGAGTATACATTATTAT 57.155 33.333 5.50 0.00 0.00 1.28
2655 2763 9.974980 TTATTTTGTTTCAAAGTTCATACTCCC 57.025 29.630 0.00 0.00 31.99 4.30
2656 2764 7.654022 TTTTGTTTCAAAGTTCATACTCCCT 57.346 32.000 0.00 0.00 31.99 4.20
2657 2765 7.654022 TTTGTTTCAAAGTTCATACTCCCTT 57.346 32.000 0.00 0.00 31.99 3.95
2658 2766 6.633500 TGTTTCAAAGTTCATACTCCCTTG 57.367 37.500 0.00 0.00 31.99 3.61
2659 2767 6.361433 TGTTTCAAAGTTCATACTCCCTTGA 58.639 36.000 0.00 0.00 31.99 3.02
2660 2768 6.262273 TGTTTCAAAGTTCATACTCCCTTGAC 59.738 38.462 0.00 0.00 31.63 3.18
2661 2769 5.560722 TCAAAGTTCATACTCCCTTGACA 57.439 39.130 0.00 0.00 31.99 3.58
2662 2770 6.126863 TCAAAGTTCATACTCCCTTGACAT 57.873 37.500 0.00 0.00 31.99 3.06
2663 2771 6.542821 TCAAAGTTCATACTCCCTTGACATT 58.457 36.000 0.00 0.00 31.99 2.71
2664 2772 7.685481 TCAAAGTTCATACTCCCTTGACATTA 58.315 34.615 0.00 0.00 31.99 1.90
2665 2773 8.160765 TCAAAGTTCATACTCCCTTGACATTAA 58.839 33.333 0.00 0.00 31.99 1.40
2666 2774 8.960591 CAAAGTTCATACTCCCTTGACATTAAT 58.039 33.333 0.00 0.00 31.99 1.40
2667 2775 9.533831 AAAGTTCATACTCCCTTGACATTAATT 57.466 29.630 0.00 0.00 31.99 1.40
2668 2776 8.738645 AGTTCATACTCCCTTGACATTAATTC 57.261 34.615 0.00 0.00 0.00 2.17
2669 2777 8.328758 AGTTCATACTCCCTTGACATTAATTCA 58.671 33.333 0.00 0.00 0.00 2.57
2670 2778 8.956426 GTTCATACTCCCTTGACATTAATTCAA 58.044 33.333 10.58 10.58 0.00 2.69
2671 2779 9.527157 TTCATACTCCCTTGACATTAATTCAAA 57.473 29.630 11.58 1.45 32.61 2.69
2672 2780 9.527157 TCATACTCCCTTGACATTAATTCAAAA 57.473 29.630 11.58 3.92 32.61 2.44
2673 2781 9.573133 CATACTCCCTTGACATTAATTCAAAAC 57.427 33.333 11.58 0.00 32.61 2.43
2674 2782 7.839680 ACTCCCTTGACATTAATTCAAAACT 57.160 32.000 11.58 0.00 32.61 2.66
2675 2783 7.661040 ACTCCCTTGACATTAATTCAAAACTG 58.339 34.615 11.58 7.41 32.61 3.16
2676 2784 6.454795 TCCCTTGACATTAATTCAAAACTGC 58.545 36.000 11.58 0.00 32.61 4.40
2677 2785 5.345741 CCCTTGACATTAATTCAAAACTGCG 59.654 40.000 11.58 0.00 32.61 5.18
2678 2786 6.148948 CCTTGACATTAATTCAAAACTGCGA 58.851 36.000 11.58 0.00 32.61 5.10
2679 2787 6.088085 CCTTGACATTAATTCAAAACTGCGAC 59.912 38.462 11.58 0.00 32.61 5.19
2680 2788 6.066054 TGACATTAATTCAAAACTGCGACA 57.934 33.333 0.00 0.00 0.00 4.35
2681 2789 5.912396 TGACATTAATTCAAAACTGCGACAC 59.088 36.000 0.00 0.00 0.00 3.67
2682 2790 6.072112 ACATTAATTCAAAACTGCGACACT 57.928 33.333 0.00 0.00 0.00 3.55
2683 2791 6.503524 ACATTAATTCAAAACTGCGACACTT 58.496 32.000 0.00 0.00 0.00 3.16
2684 2792 7.644490 ACATTAATTCAAAACTGCGACACTTA 58.356 30.769 0.00 0.00 0.00 2.24
2685 2793 7.589954 ACATTAATTCAAAACTGCGACACTTAC 59.410 33.333 0.00 0.00 0.00 2.34
2686 2794 5.751243 AATTCAAAACTGCGACACTTACT 57.249 34.783 0.00 0.00 0.00 2.24
2687 2795 5.751243 ATTCAAAACTGCGACACTTACTT 57.249 34.783 0.00 0.00 0.00 2.24
2688 2796 5.554822 TTCAAAACTGCGACACTTACTTT 57.445 34.783 0.00 0.00 0.00 2.66
2689 2797 4.904116 TCAAAACTGCGACACTTACTTTG 58.096 39.130 0.00 0.00 0.00 2.77
2690 2798 4.393680 TCAAAACTGCGACACTTACTTTGT 59.606 37.500 0.00 0.00 0.00 2.83
2691 2799 5.581479 TCAAAACTGCGACACTTACTTTGTA 59.419 36.000 0.00 0.00 0.00 2.41
2692 2800 5.652744 AAACTGCGACACTTACTTTGTAG 57.347 39.130 0.00 0.00 0.00 2.74
2693 2801 3.650139 ACTGCGACACTTACTTTGTAGG 58.350 45.455 0.00 0.00 0.00 3.18
2694 2802 2.993899 CTGCGACACTTACTTTGTAGGG 59.006 50.000 0.00 0.00 0.00 3.53
2695 2803 2.629137 TGCGACACTTACTTTGTAGGGA 59.371 45.455 0.00 0.00 0.00 4.20
2696 2804 3.251571 GCGACACTTACTTTGTAGGGAG 58.748 50.000 0.00 0.00 0.00 4.30
2697 2805 3.305881 GCGACACTTACTTTGTAGGGAGT 60.306 47.826 0.00 0.00 0.00 3.85
2698 2806 4.082571 GCGACACTTACTTTGTAGGGAGTA 60.083 45.833 0.00 0.00 0.00 2.59
2699 2807 5.397326 CGACACTTACTTTGTAGGGAGTAC 58.603 45.833 0.00 0.00 0.00 2.73
2700 2808 5.182760 CGACACTTACTTTGTAGGGAGTACT 59.817 44.000 0.00 0.00 32.19 2.73
2701 2809 6.372659 CGACACTTACTTTGTAGGGAGTACTA 59.627 42.308 0.00 0.00 32.19 1.82
2702 2810 7.413877 CGACACTTACTTTGTAGGGAGTACTAG 60.414 44.444 0.00 0.00 32.19 2.57
2703 2811 7.465116 ACACTTACTTTGTAGGGAGTACTAGA 58.535 38.462 0.00 0.00 32.19 2.43
2704 2812 8.114743 ACACTTACTTTGTAGGGAGTACTAGAT 58.885 37.037 0.00 0.00 32.19 1.98
2705 2813 9.624373 CACTTACTTTGTAGGGAGTACTAGATA 57.376 37.037 0.00 0.00 32.19 1.98
2706 2814 9.625747 ACTTACTTTGTAGGGAGTACTAGATAC 57.374 37.037 0.00 0.00 32.19 2.24
2724 2832 9.196139 ACTAGATACTCTCATTAGAAAGCTTGT 57.804 33.333 0.00 0.00 0.00 3.16
2725 2833 9.462174 CTAGATACTCTCATTAGAAAGCTTGTG 57.538 37.037 0.00 0.00 0.00 3.33
2726 2834 7.846066 AGATACTCTCATTAGAAAGCTTGTGT 58.154 34.615 0.00 0.00 0.00 3.72
2727 2835 7.978975 AGATACTCTCATTAGAAAGCTTGTGTC 59.021 37.037 0.00 0.00 0.00 3.67
2728 2836 6.107901 ACTCTCATTAGAAAGCTTGTGTCT 57.892 37.500 0.00 1.47 0.00 3.41
2729 2837 7.233389 ACTCTCATTAGAAAGCTTGTGTCTA 57.767 36.000 0.00 0.34 0.00 2.59
2730 2838 7.671302 ACTCTCATTAGAAAGCTTGTGTCTAA 58.329 34.615 17.31 17.31 38.03 2.10
2731 2839 8.317679 ACTCTCATTAGAAAGCTTGTGTCTAAT 58.682 33.333 19.49 19.49 42.56 1.73
2732 2840 8.709386 TCTCATTAGAAAGCTTGTGTCTAATC 57.291 34.615 21.26 5.84 40.80 1.75
2733 2841 8.535335 TCTCATTAGAAAGCTTGTGTCTAATCT 58.465 33.333 21.26 11.85 40.80 2.40
2734 2842 9.160496 CTCATTAGAAAGCTTGTGTCTAATCTT 57.840 33.333 21.26 6.92 40.80 2.40
2735 2843 8.939929 TCATTAGAAAGCTTGTGTCTAATCTTG 58.060 33.333 21.26 15.37 40.80 3.02
2736 2844 8.725148 CATTAGAAAGCTTGTGTCTAATCTTGT 58.275 33.333 21.26 6.37 40.80 3.16
2737 2845 9.944376 ATTAGAAAGCTTGTGTCTAATCTTGTA 57.056 29.630 19.49 1.90 39.33 2.41
2738 2846 9.944376 TTAGAAAGCTTGTGTCTAATCTTGTAT 57.056 29.630 12.90 0.00 30.71 2.29
2739 2847 8.854614 AGAAAGCTTGTGTCTAATCTTGTATT 57.145 30.769 0.00 0.00 0.00 1.89
2740 2848 9.289782 AGAAAGCTTGTGTCTAATCTTGTATTT 57.710 29.630 0.00 0.00 0.00 1.40
2741 2849 9.899226 GAAAGCTTGTGTCTAATCTTGTATTTT 57.101 29.630 0.00 0.00 0.00 1.82
2757 2865 9.513906 TCTTGTATTTTAATGATGTGGAAGTGA 57.486 29.630 0.00 0.00 0.00 3.41
2758 2866 9.559958 CTTGTATTTTAATGATGTGGAAGTGAC 57.440 33.333 0.00 0.00 0.00 3.67
2759 2867 7.747888 TGTATTTTAATGATGTGGAAGTGACG 58.252 34.615 0.00 0.00 0.00 4.35
2760 2868 5.621197 TTTTAATGATGTGGAAGTGACGG 57.379 39.130 0.00 0.00 0.00 4.79
2761 2869 4.545208 TTAATGATGTGGAAGTGACGGA 57.455 40.909 0.00 0.00 0.00 4.69
2762 2870 2.680312 ATGATGTGGAAGTGACGGAG 57.320 50.000 0.00 0.00 0.00 4.63
2763 2871 0.608130 TGATGTGGAAGTGACGGAGG 59.392 55.000 0.00 0.00 0.00 4.30
2764 2872 0.741221 GATGTGGAAGTGACGGAGGC 60.741 60.000 0.00 0.00 0.00 4.70
2765 2873 1.480212 ATGTGGAAGTGACGGAGGCA 61.480 55.000 0.00 0.00 0.00 4.75
2766 2874 1.070786 GTGGAAGTGACGGAGGCAA 59.929 57.895 0.00 0.00 0.00 4.52
2767 2875 0.321653 GTGGAAGTGACGGAGGCAAT 60.322 55.000 0.00 0.00 0.00 3.56
2768 2876 0.400213 TGGAAGTGACGGAGGCAATT 59.600 50.000 0.00 0.00 0.00 2.32
2769 2877 1.087501 GGAAGTGACGGAGGCAATTC 58.912 55.000 7.45 7.45 39.02 2.17
2770 2878 1.610624 GGAAGTGACGGAGGCAATTCA 60.611 52.381 16.27 0.00 40.84 2.57
2771 2879 1.734465 GAAGTGACGGAGGCAATTCAG 59.266 52.381 10.67 0.00 39.40 3.02
2772 2880 0.976641 AGTGACGGAGGCAATTCAGA 59.023 50.000 0.00 0.00 0.00 3.27
2773 2881 1.556911 AGTGACGGAGGCAATTCAGAT 59.443 47.619 0.00 0.00 0.00 2.90
2774 2882 2.766263 AGTGACGGAGGCAATTCAGATA 59.234 45.455 0.00 0.00 0.00 1.98
2775 2883 2.866762 GTGACGGAGGCAATTCAGATAC 59.133 50.000 0.00 0.00 0.00 2.24
2776 2884 2.158957 TGACGGAGGCAATTCAGATACC 60.159 50.000 0.00 0.00 0.00 2.73
2777 2885 1.837439 ACGGAGGCAATTCAGATACCA 59.163 47.619 0.00 0.00 0.00 3.25
2778 2886 2.213499 CGGAGGCAATTCAGATACCAC 58.787 52.381 0.00 0.00 0.00 4.16
2779 2887 2.158900 CGGAGGCAATTCAGATACCACT 60.159 50.000 0.00 0.00 0.00 4.00
2780 2888 3.069586 CGGAGGCAATTCAGATACCACTA 59.930 47.826 0.00 0.00 0.00 2.74
2781 2889 4.262635 CGGAGGCAATTCAGATACCACTAT 60.263 45.833 0.00 0.00 0.00 2.12
2782 2890 5.625150 GGAGGCAATTCAGATACCACTATT 58.375 41.667 0.00 0.00 0.00 1.73
2783 2891 6.064717 GGAGGCAATTCAGATACCACTATTT 58.935 40.000 0.00 0.00 0.00 1.40
2784 2892 6.547510 GGAGGCAATTCAGATACCACTATTTT 59.452 38.462 0.00 0.00 0.00 1.82
2785 2893 7.068716 GGAGGCAATTCAGATACCACTATTTTT 59.931 37.037 0.00 0.00 0.00 1.94
2831 2939 8.929260 TTCATCATATGATAGCACATTCCTTT 57.071 30.769 17.77 0.00 39.39 3.11
2833 2941 9.440773 TCATCATATGATAGCACATTCCTTTAC 57.559 33.333 17.77 0.00 33.59 2.01
2834 2942 9.223099 CATCATATGATAGCACATTCCTTTACA 57.777 33.333 17.77 0.00 32.63 2.41
2835 2943 9.797642 ATCATATGATAGCACATTCCTTTACAA 57.202 29.630 16.75 0.00 32.01 2.41
2836 2944 9.276590 TCATATGATAGCACATTCCTTTACAAG 57.723 33.333 0.00 0.00 0.00 3.16
2837 2945 9.060347 CATATGATAGCACATTCCTTTACAAGT 57.940 33.333 0.00 0.00 0.00 3.16
2838 2946 7.944729 ATGATAGCACATTCCTTTACAAGTT 57.055 32.000 0.00 0.00 0.00 2.66
2839 2947 7.144722 TGATAGCACATTCCTTTACAAGTTG 57.855 36.000 0.00 0.00 0.00 3.16
2840 2948 6.714810 TGATAGCACATTCCTTTACAAGTTGT 59.285 34.615 14.05 14.05 0.00 3.32
2841 2949 5.186996 AGCACATTCCTTTACAAGTTGTG 57.813 39.130 18.90 1.66 36.18 3.33
2842 2950 4.887071 AGCACATTCCTTTACAAGTTGTGA 59.113 37.500 18.90 7.66 35.63 3.58
2843 2951 5.536161 AGCACATTCCTTTACAAGTTGTGAT 59.464 36.000 18.90 0.00 35.63 3.06
2844 2952 5.630680 GCACATTCCTTTACAAGTTGTGATG 59.369 40.000 18.90 12.07 35.63 3.07
2845 2953 6.514870 GCACATTCCTTTACAAGTTGTGATGA 60.515 38.462 18.90 7.48 35.63 2.92
2846 2954 7.424803 CACATTCCTTTACAAGTTGTGATGAA 58.575 34.615 18.90 15.05 35.63 2.57
2847 2955 7.379529 CACATTCCTTTACAAGTTGTGATGAAC 59.620 37.037 18.90 0.00 35.63 3.18
2848 2956 7.285401 ACATTCCTTTACAAGTTGTGATGAACT 59.715 33.333 18.90 3.64 37.81 3.01
2849 2957 8.783093 CATTCCTTTACAAGTTGTGATGAACTA 58.217 33.333 18.90 0.00 35.01 2.24
2850 2958 7.724305 TCCTTTACAAGTTGTGATGAACTAC 57.276 36.000 18.90 0.00 35.01 2.73
2851 2959 7.276658 TCCTTTACAAGTTGTGATGAACTACA 58.723 34.615 18.90 0.00 37.03 2.74
2852 2960 7.936847 TCCTTTACAAGTTGTGATGAACTACAT 59.063 33.333 18.90 0.00 42.47 2.29
2860 2968 2.938956 GATGAACTACATCCAGGGGG 57.061 55.000 0.00 0.00 46.78 5.40
2871 2979 1.511613 TCCAGGGGGATCTGAATCAC 58.488 55.000 0.00 0.00 38.64 3.06
2872 2980 1.216064 CCAGGGGGATCTGAATCACA 58.784 55.000 0.00 0.00 37.01 3.58
2873 2981 1.142465 CCAGGGGGATCTGAATCACAG 59.858 57.143 0.00 0.00 41.54 3.66
2884 2992 2.754472 TGAATCACAGACAGTCGGTTG 58.246 47.619 3.23 0.92 0.00 3.77
2885 2993 2.364002 TGAATCACAGACAGTCGGTTGA 59.636 45.455 3.23 6.11 0.00 3.18
2886 2994 3.006859 TGAATCACAGACAGTCGGTTGAT 59.993 43.478 3.23 7.97 0.00 2.57
2887 2995 2.438868 TCACAGACAGTCGGTTGATG 57.561 50.000 3.23 0.00 0.00 3.07
2888 2996 1.686587 TCACAGACAGTCGGTTGATGT 59.313 47.619 3.23 0.00 0.00 3.06
2889 2997 2.102420 TCACAGACAGTCGGTTGATGTT 59.898 45.455 3.23 0.00 0.00 2.71
2890 2998 2.476619 CACAGACAGTCGGTTGATGTTC 59.523 50.000 3.23 0.00 0.00 3.18
2891 2999 2.365617 ACAGACAGTCGGTTGATGTTCT 59.634 45.455 0.00 0.00 0.00 3.01
2892 3000 3.572682 ACAGACAGTCGGTTGATGTTCTA 59.427 43.478 0.00 0.00 0.00 2.10
2893 3001 4.038763 ACAGACAGTCGGTTGATGTTCTAA 59.961 41.667 0.00 0.00 0.00 2.10
2894 3002 4.988540 CAGACAGTCGGTTGATGTTCTAAA 59.011 41.667 0.00 0.00 0.00 1.85
2895 3003 4.989168 AGACAGTCGGTTGATGTTCTAAAC 59.011 41.667 0.00 0.00 0.00 2.01
2896 3004 4.957296 ACAGTCGGTTGATGTTCTAAACT 58.043 39.130 0.00 0.00 0.00 2.66
2897 3005 4.750098 ACAGTCGGTTGATGTTCTAAACTG 59.250 41.667 0.00 0.00 38.02 3.16
2898 3006 4.988540 CAGTCGGTTGATGTTCTAAACTGA 59.011 41.667 0.00 0.00 36.97 3.41
2899 3007 5.465390 CAGTCGGTTGATGTTCTAAACTGAA 59.535 40.000 0.00 0.00 40.04 3.02
2900 3008 6.018262 CAGTCGGTTGATGTTCTAAACTGAAA 60.018 38.462 0.00 0.00 40.04 2.69
2901 3009 6.202954 AGTCGGTTGATGTTCTAAACTGAAAG 59.797 38.462 0.00 0.00 40.04 2.62
2902 3010 5.049680 TCGGTTGATGTTCTAAACTGAAAGC 60.050 40.000 0.00 0.00 36.51 3.51
2903 3011 5.277779 CGGTTGATGTTCTAAACTGAAAGCA 60.278 40.000 0.00 0.00 37.60 3.91
2904 3012 6.568462 CGGTTGATGTTCTAAACTGAAAGCAT 60.568 38.462 0.00 0.00 37.60 3.79
2905 3013 7.147976 GGTTGATGTTCTAAACTGAAAGCATT 58.852 34.615 0.00 0.00 37.60 3.56
2906 3014 7.115378 GGTTGATGTTCTAAACTGAAAGCATTG 59.885 37.037 0.00 0.00 37.60 2.82
2907 3015 7.509141 TGATGTTCTAAACTGAAAGCATTGA 57.491 32.000 0.00 0.00 37.60 2.57
2908 3016 7.587629 TGATGTTCTAAACTGAAAGCATTGAG 58.412 34.615 0.00 0.00 37.60 3.02
2909 3017 7.445096 TGATGTTCTAAACTGAAAGCATTGAGA 59.555 33.333 0.00 0.00 37.60 3.27
2910 3018 7.194607 TGTTCTAAACTGAAAGCATTGAGAG 57.805 36.000 0.00 0.00 37.60 3.20
2911 3019 6.767902 TGTTCTAAACTGAAAGCATTGAGAGT 59.232 34.615 0.00 0.00 37.60 3.24
2912 3020 6.791887 TCTAAACTGAAAGCATTGAGAGTG 57.208 37.500 0.00 0.00 37.60 3.51
2913 3021 6.291377 TCTAAACTGAAAGCATTGAGAGTGT 58.709 36.000 0.00 0.00 37.60 3.55
2914 3022 4.825546 AACTGAAAGCATTGAGAGTGTG 57.174 40.909 0.00 0.00 37.60 3.82
2915 3023 4.077300 ACTGAAAGCATTGAGAGTGTGA 57.923 40.909 0.00 0.00 37.60 3.58
2916 3024 4.063689 ACTGAAAGCATTGAGAGTGTGAG 58.936 43.478 0.00 0.00 37.60 3.51
2917 3025 2.810274 TGAAAGCATTGAGAGTGTGAGC 59.190 45.455 0.00 0.00 0.00 4.26
2918 3026 2.556144 AAGCATTGAGAGTGTGAGCA 57.444 45.000 0.00 0.00 0.00 4.26
2919 3027 2.783609 AGCATTGAGAGTGTGAGCAT 57.216 45.000 0.00 0.00 0.00 3.79
2920 3028 3.900966 AGCATTGAGAGTGTGAGCATA 57.099 42.857 0.00 0.00 0.00 3.14
2921 3029 3.794717 AGCATTGAGAGTGTGAGCATAG 58.205 45.455 0.00 0.00 0.00 2.23
2922 3030 2.871022 GCATTGAGAGTGTGAGCATAGG 59.129 50.000 0.00 0.00 0.00 2.57
2923 3031 3.464907 CATTGAGAGTGTGAGCATAGGG 58.535 50.000 0.00 0.00 0.00 3.53
2924 3032 2.532250 TGAGAGTGTGAGCATAGGGA 57.468 50.000 0.00 0.00 0.00 4.20
2925 3033 2.382882 TGAGAGTGTGAGCATAGGGAG 58.617 52.381 0.00 0.00 0.00 4.30
2926 3034 1.686052 GAGAGTGTGAGCATAGGGAGG 59.314 57.143 0.00 0.00 0.00 4.30
2927 3035 1.007721 AGAGTGTGAGCATAGGGAGGT 59.992 52.381 0.00 0.00 0.00 3.85
2928 3036 2.245028 AGAGTGTGAGCATAGGGAGGTA 59.755 50.000 0.00 0.00 0.00 3.08
2929 3037 3.116939 AGAGTGTGAGCATAGGGAGGTAT 60.117 47.826 0.00 0.00 0.00 2.73
2930 3038 3.643792 GAGTGTGAGCATAGGGAGGTATT 59.356 47.826 0.00 0.00 0.00 1.89
2931 3039 4.040755 AGTGTGAGCATAGGGAGGTATTT 58.959 43.478 0.00 0.00 0.00 1.40
2932 3040 4.475016 AGTGTGAGCATAGGGAGGTATTTT 59.525 41.667 0.00 0.00 0.00 1.82
2933 3041 5.665812 AGTGTGAGCATAGGGAGGTATTTTA 59.334 40.000 0.00 0.00 0.00 1.52
2934 3042 6.330250 AGTGTGAGCATAGGGAGGTATTTTAT 59.670 38.462 0.00 0.00 0.00 1.40
2935 3043 6.428159 GTGTGAGCATAGGGAGGTATTTTATG 59.572 42.308 0.00 0.00 0.00 1.90
2936 3044 6.101150 TGTGAGCATAGGGAGGTATTTTATGT 59.899 38.462 0.00 0.00 0.00 2.29
2937 3045 6.998673 GTGAGCATAGGGAGGTATTTTATGTT 59.001 38.462 0.00 0.00 0.00 2.71
2938 3046 7.502561 GTGAGCATAGGGAGGTATTTTATGTTT 59.497 37.037 0.00 0.00 0.00 2.83
2939 3047 7.502226 TGAGCATAGGGAGGTATTTTATGTTTG 59.498 37.037 0.00 0.00 0.00 2.93
2940 3048 6.777580 AGCATAGGGAGGTATTTTATGTTTGG 59.222 38.462 0.00 0.00 0.00 3.28
2941 3049 6.015434 GCATAGGGAGGTATTTTATGTTTGGG 60.015 42.308 0.00 0.00 0.00 4.12
2942 3050 4.878968 AGGGAGGTATTTTATGTTTGGGG 58.121 43.478 0.00 0.00 0.00 4.96
2943 3051 4.546605 AGGGAGGTATTTTATGTTTGGGGA 59.453 41.667 0.00 0.00 0.00 4.81
2944 3052 5.016890 AGGGAGGTATTTTATGTTTGGGGAA 59.983 40.000 0.00 0.00 0.00 3.97
2945 3053 5.362717 GGGAGGTATTTTATGTTTGGGGAAG 59.637 44.000 0.00 0.00 0.00 3.46
2946 3054 5.955959 GGAGGTATTTTATGTTTGGGGAAGT 59.044 40.000 0.00 0.00 0.00 3.01
2947 3055 7.120716 GGAGGTATTTTATGTTTGGGGAAGTA 58.879 38.462 0.00 0.00 0.00 2.24
2948 3056 7.067859 GGAGGTATTTTATGTTTGGGGAAGTAC 59.932 40.741 0.00 0.00 0.00 2.73
2949 3057 6.600427 AGGTATTTTATGTTTGGGGAAGTACG 59.400 38.462 0.00 0.00 0.00 3.67
2950 3058 6.598850 GGTATTTTATGTTTGGGGAAGTACGA 59.401 38.462 0.00 0.00 0.00 3.43
2951 3059 7.121020 GGTATTTTATGTTTGGGGAAGTACGAA 59.879 37.037 0.00 0.00 0.00 3.85
2952 3060 6.563222 TTTTATGTTTGGGGAAGTACGAAG 57.437 37.500 0.00 0.00 0.00 3.79
2953 3061 2.554370 TGTTTGGGGAAGTACGAAGG 57.446 50.000 0.00 0.00 0.00 3.46
2954 3062 2.048601 TGTTTGGGGAAGTACGAAGGA 58.951 47.619 0.00 0.00 0.00 3.36
2955 3063 2.438763 TGTTTGGGGAAGTACGAAGGAA 59.561 45.455 0.00 0.00 0.00 3.36
2956 3064 3.117963 TGTTTGGGGAAGTACGAAGGAAA 60.118 43.478 0.00 0.00 0.00 3.13
2957 3065 3.860968 TTGGGGAAGTACGAAGGAAAA 57.139 42.857 0.00 0.00 0.00 2.29
2958 3066 3.860968 TGGGGAAGTACGAAGGAAAAA 57.139 42.857 0.00 0.00 0.00 1.94
2959 3067 3.746940 TGGGGAAGTACGAAGGAAAAAG 58.253 45.455 0.00 0.00 0.00 2.27
2960 3068 3.391955 TGGGGAAGTACGAAGGAAAAAGA 59.608 43.478 0.00 0.00 0.00 2.52
2961 3069 4.042435 TGGGGAAGTACGAAGGAAAAAGAT 59.958 41.667 0.00 0.00 0.00 2.40
2962 3070 5.008331 GGGGAAGTACGAAGGAAAAAGATT 58.992 41.667 0.00 0.00 0.00 2.40
2963 3071 5.475909 GGGGAAGTACGAAGGAAAAAGATTT 59.524 40.000 0.00 0.00 0.00 2.17
2964 3072 6.015688 GGGGAAGTACGAAGGAAAAAGATTTT 60.016 38.462 0.00 0.00 0.00 1.82
2965 3073 6.861572 GGGAAGTACGAAGGAAAAAGATTTTG 59.138 38.462 0.00 0.00 0.00 2.44
2966 3074 7.255346 GGGAAGTACGAAGGAAAAAGATTTTGA 60.255 37.037 0.00 0.00 0.00 2.69
2967 3075 8.132995 GGAAGTACGAAGGAAAAAGATTTTGAA 58.867 33.333 0.00 0.00 0.00 2.69
2968 3076 9.678941 GAAGTACGAAGGAAAAAGATTTTGAAT 57.321 29.630 0.00 0.00 0.00 2.57
2972 3080 7.630026 ACGAAGGAAAAAGATTTTGAATTTGC 58.370 30.769 0.00 0.00 0.00 3.68
2973 3081 7.071414 CGAAGGAAAAAGATTTTGAATTTGCC 58.929 34.615 0.00 0.00 31.63 4.52
2974 3082 7.041848 CGAAGGAAAAAGATTTTGAATTTGCCT 60.042 33.333 0.00 0.00 41.61 4.75
2975 3083 8.523915 AAGGAAAAAGATTTTGAATTTGCCTT 57.476 26.923 3.96 3.96 43.10 4.35
2976 3084 8.523915 AGGAAAAAGATTTTGAATTTGCCTTT 57.476 26.923 0.00 0.00 37.50 3.11
2977 3085 8.623903 AGGAAAAAGATTTTGAATTTGCCTTTC 58.376 29.630 0.00 0.00 37.50 2.62
2978 3086 7.862372 GGAAAAAGATTTTGAATTTGCCTTTCC 59.138 33.333 0.00 0.00 29.32 3.13
2979 3087 6.882610 AAAGATTTTGAATTTGCCTTTCCC 57.117 33.333 0.00 0.00 0.00 3.97
2980 3088 5.830799 AGATTTTGAATTTGCCTTTCCCT 57.169 34.783 0.00 0.00 0.00 4.20
2981 3089 6.191657 AGATTTTGAATTTGCCTTTCCCTT 57.808 33.333 0.00 0.00 0.00 3.95
2982 3090 6.604171 AGATTTTGAATTTGCCTTTCCCTTT 58.396 32.000 0.00 0.00 0.00 3.11
2983 3091 7.062322 AGATTTTGAATTTGCCTTTCCCTTTT 58.938 30.769 0.00 0.00 0.00 2.27
2984 3092 7.560991 AGATTTTGAATTTGCCTTTCCCTTTTT 59.439 29.630 0.00 0.00 0.00 1.94
2985 3093 6.691754 TTTGAATTTGCCTTTCCCTTTTTC 57.308 33.333 0.00 0.00 0.00 2.29
2986 3094 4.713553 TGAATTTGCCTTTCCCTTTTTCC 58.286 39.130 0.00 0.00 0.00 3.13
2987 3095 2.900716 TTTGCCTTTCCCTTTTTCCG 57.099 45.000 0.00 0.00 0.00 4.30
2988 3096 1.783071 TTGCCTTTCCCTTTTTCCGT 58.217 45.000 0.00 0.00 0.00 4.69
2989 3097 1.783071 TGCCTTTCCCTTTTTCCGTT 58.217 45.000 0.00 0.00 0.00 4.44
2990 3098 2.946785 TGCCTTTCCCTTTTTCCGTTA 58.053 42.857 0.00 0.00 0.00 3.18
2991 3099 2.888414 TGCCTTTCCCTTTTTCCGTTAG 59.112 45.455 0.00 0.00 0.00 2.34
2992 3100 3.151554 GCCTTTCCCTTTTTCCGTTAGA 58.848 45.455 0.00 0.00 0.00 2.10
2993 3101 3.570975 GCCTTTCCCTTTTTCCGTTAGAA 59.429 43.478 0.00 0.00 0.00 2.10
2994 3102 4.038282 GCCTTTCCCTTTTTCCGTTAGAAA 59.962 41.667 0.00 0.00 42.82 2.52
3020 3128 8.525290 AATAACTCAATCAAAATCCCTACAGG 57.475 34.615 0.00 0.00 0.00 4.00
3031 3139 2.492025 TCCCTACAGGAATGCCATTCT 58.508 47.619 16.51 0.45 43.78 2.40
3032 3140 2.852449 TCCCTACAGGAATGCCATTCTT 59.148 45.455 16.51 6.81 43.78 2.52
3039 3147 5.587388 CAGGAATGCCATTCTTGTTATGT 57.413 39.130 18.49 0.00 40.33 2.29
3040 3148 6.698008 CAGGAATGCCATTCTTGTTATGTA 57.302 37.500 18.49 0.00 40.33 2.29
3041 3149 7.099266 CAGGAATGCCATTCTTGTTATGTAA 57.901 36.000 18.49 0.00 40.33 2.41
3042 3150 7.719483 CAGGAATGCCATTCTTGTTATGTAAT 58.281 34.615 18.49 0.00 40.33 1.89
3043 3151 8.199449 CAGGAATGCCATTCTTGTTATGTAATT 58.801 33.333 18.49 0.00 40.33 1.40
3044 3152 8.199449 AGGAATGCCATTCTTGTTATGTAATTG 58.801 33.333 16.51 0.00 39.24 2.32
3045 3153 7.439056 GGAATGCCATTCTTGTTATGTAATTGG 59.561 37.037 16.51 0.00 39.24 3.16
3046 3154 7.658525 ATGCCATTCTTGTTATGTAATTGGA 57.341 32.000 0.00 0.00 0.00 3.53
3047 3155 7.099266 TGCCATTCTTGTTATGTAATTGGAG 57.901 36.000 0.00 0.00 0.00 3.86
3048 3156 6.663093 TGCCATTCTTGTTATGTAATTGGAGT 59.337 34.615 0.00 0.00 0.00 3.85
3049 3157 7.831690 TGCCATTCTTGTTATGTAATTGGAGTA 59.168 33.333 0.00 0.00 0.00 2.59
3050 3158 8.850156 GCCATTCTTGTTATGTAATTGGAGTAT 58.150 33.333 0.00 0.00 0.00 2.12
3067 3175 8.958119 TTGGAGTATATGCTTAGTTTAACCTG 57.042 34.615 0.00 0.00 0.00 4.00
3068 3176 8.086143 TGGAGTATATGCTTAGTTTAACCTGT 57.914 34.615 0.00 0.00 0.00 4.00
3069 3177 9.204337 TGGAGTATATGCTTAGTTTAACCTGTA 57.796 33.333 0.00 0.00 0.00 2.74
3088 3196 9.520515 AACCTGTATATGTTTTGATTCTGTTCT 57.479 29.630 0.00 0.00 0.00 3.01
3089 3197 9.520515 ACCTGTATATGTTTTGATTCTGTTCTT 57.479 29.630 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.953648 TGCGTTCCTCTCGTTCCATATA 59.046 45.455 0.00 0.00 0.00 0.86
27 28 0.389817 TTGTGGATGCGTTCCTCTCG 60.390 55.000 7.01 0.00 45.68 4.04
43 44 1.032014 ATTGTTGGCGCTCTTGTTGT 58.968 45.000 7.64 0.00 0.00 3.32
44 45 2.138596 AATTGTTGGCGCTCTTGTTG 57.861 45.000 7.64 0.00 0.00 3.33
84 90 2.238521 GTGACCCAAAGATTTGCCTCA 58.761 47.619 0.00 0.53 36.86 3.86
119 125 0.668401 CGACACGGTTCACCCTAACC 60.668 60.000 0.00 0.00 44.63 2.85
131 137 4.026393 TGAATTATTATTGTCGCGACACGG 60.026 41.667 39.38 0.00 41.67 4.94
142 148 6.909895 TCCAAACGCGACATGAATTATTATTG 59.090 34.615 15.93 0.00 0.00 1.90
160 166 5.344884 AGTTTGTTACAAACCATCCAAACG 58.655 37.500 29.95 0.00 43.76 3.60
167 173 6.942576 AGAGCATAGAGTTTGTTACAAACCAT 59.057 34.615 29.95 22.63 0.00 3.55
187 193 7.577303 ACCTCATCCATTAATTAAGAAGAGCA 58.423 34.615 11.43 0.00 0.00 4.26
203 209 7.505585 ACAGAAACAAAAGATTTACCTCATCCA 59.494 33.333 0.00 0.00 0.00 3.41
252 260 1.675552 ACTTTGGTGGTTTGACGGAG 58.324 50.000 0.00 0.00 0.00 4.63
422 434 4.070552 GAGTGGAAGACGGCGGCT 62.071 66.667 10.88 10.88 0.00 5.52
517 532 6.681777 CCTTGTGAAGGGAGAACAAAATTAG 58.318 40.000 0.00 0.00 45.27 1.73
532 547 1.871772 CTCTTGGCGCCTTGTGAAG 59.128 57.895 29.70 21.69 0.00 3.02
618 636 6.706055 TCTTTATGTCAACTGAGCTAAACG 57.294 37.500 0.00 0.00 0.00 3.60
625 643 6.968131 TCGGAATTCTTTATGTCAACTGAG 57.032 37.500 5.23 0.00 0.00 3.35
694 712 1.475213 GGTCTCCCCTAATTCCAAGCG 60.475 57.143 0.00 0.00 0.00 4.68
782 800 4.906065 ACGATTATGTTACCGAGCTGTA 57.094 40.909 0.00 0.00 0.00 2.74
797 815 7.281040 ACGACCCTTCATTTCTATACGATTA 57.719 36.000 0.00 0.00 0.00 1.75
830 848 2.780643 CATTCTGCGCAGTGACGG 59.219 61.111 34.70 17.88 0.00 4.79
831 849 2.097160 GCATTCTGCGCAGTGACG 59.903 61.111 34.70 22.23 31.71 4.35
843 861 2.614057 CAGGGGTAAACATCTCGCATTC 59.386 50.000 0.00 0.00 0.00 2.67
959 988 3.532155 CTTCCGAGGCCTCCCGAG 61.532 72.222 27.20 16.96 35.76 4.63
962 991 4.168291 CTGCTTCCGAGGCCTCCC 62.168 72.222 27.20 10.64 0.00 4.30
963 992 4.847444 GCTGCTTCCGAGGCCTCC 62.847 72.222 27.20 12.95 0.00 4.30
964 993 3.612247 TTGCTGCTTCCGAGGCCTC 62.612 63.158 23.79 23.79 0.00 4.70
965 994 3.618780 CTTGCTGCTTCCGAGGCCT 62.619 63.158 3.86 3.86 0.00 5.19
966 995 3.130160 CTTGCTGCTTCCGAGGCC 61.130 66.667 0.00 0.00 0.00 5.19
967 996 3.808656 GCTTGCTGCTTCCGAGGC 61.809 66.667 0.00 0.00 38.95 4.70
968 997 2.359107 TGCTTGCTGCTTCCGAGG 60.359 61.111 0.00 0.00 43.37 4.63
974 1003 0.608308 TGATCTGCTGCTTGCTGCTT 60.608 50.000 21.38 9.49 43.37 3.91
984 1013 1.309950 CCATGGCTCTTGATCTGCTG 58.690 55.000 0.00 0.00 0.00 4.41
1279 1347 1.135972 GCACCATTACGTGTCAGCAAG 60.136 52.381 0.00 0.00 36.08 4.01
1694 1786 4.443266 GGCGAAGGTCGAGCAGCT 62.443 66.667 18.15 0.00 43.74 4.24
1799 1891 2.434359 CTCCTTTCCGTCGGTGCC 60.434 66.667 11.88 0.00 0.00 5.01
2111 2206 4.619227 ACAGCACAACGACCCCGG 62.619 66.667 0.00 0.00 40.78 5.73
2113 2208 3.660111 GCACAGCACAACGACCCC 61.660 66.667 0.00 0.00 0.00 4.95
2115 2210 1.081906 CATGCACAGCACAACGACC 60.082 57.895 0.00 0.00 43.04 4.79
2116 2211 1.727022 GCATGCACAGCACAACGAC 60.727 57.895 14.21 0.00 43.04 4.34
2117 2212 2.638719 GCATGCACAGCACAACGA 59.361 55.556 14.21 0.00 43.04 3.85
2118 2213 2.797850 CGCATGCACAGCACAACG 60.798 61.111 19.57 0.00 43.04 4.10
2119 2214 1.727022 GACGCATGCACAGCACAAC 60.727 57.895 19.57 0.00 43.04 3.32
2120 2215 2.638719 GACGCATGCACAGCACAA 59.361 55.556 19.57 0.00 43.04 3.33
2121 2216 3.356267 GGACGCATGCACAGCACA 61.356 61.111 19.57 0.00 43.04 4.57
2122 2217 2.588146 GATGGACGCATGCACAGCAC 62.588 60.000 19.57 1.73 43.04 4.40
2123 2218 2.360225 ATGGACGCATGCACAGCA 60.360 55.556 19.57 5.97 44.86 4.41
2124 2219 2.406401 GATGGACGCATGCACAGC 59.594 61.111 19.57 12.25 0.00 4.40
2125 2220 1.638388 AACGATGGACGCATGCACAG 61.638 55.000 19.57 3.77 46.94 3.66
2141 2236 1.448985 ACGGGACAAATCATGGAACG 58.551 50.000 0.00 0.00 0.00 3.95
2164 2263 5.710513 AAGAACTGAAATAATGCTGCACA 57.289 34.783 3.57 0.00 0.00 4.57
2203 2311 3.044305 GACGGCAAGCTCGCAAGT 61.044 61.111 0.00 0.00 39.48 3.16
2225 2333 2.093783 GGACAAATCGACGAATCACCAC 59.906 50.000 0.00 0.00 0.00 4.16
2228 2336 3.369835 GTGGACAAATCGACGAATCAC 57.630 47.619 0.00 1.19 0.00 3.06
2237 2345 3.304257 TCATTTTTGCGTGGACAAATCG 58.696 40.909 0.00 0.00 39.18 3.34
2270 2378 2.766313 TCAAAACATCGACACCAGAGG 58.234 47.619 0.00 0.00 0.00 3.69
2327 2435 5.738909 TCTTTGTTTTCCATTGCCAAAGAA 58.261 33.333 9.87 0.00 44.61 2.52
2359 2467 2.724708 GAGACGCAAGCAGAGCACG 61.725 63.158 0.00 0.00 45.62 5.34
2361 2469 2.047844 GGAGACGCAAGCAGAGCA 60.048 61.111 0.00 0.00 45.62 4.26
2363 2471 2.125350 GGGGAGACGCAAGCAGAG 60.125 66.667 0.00 0.00 43.99 3.35
2364 2472 4.069232 CGGGGAGACGCAAGCAGA 62.069 66.667 0.00 0.00 45.02 4.26
2389 2497 2.358003 ACAACTGGAGCAGCGAGC 60.358 61.111 0.00 0.00 46.19 5.03
2390 2498 2.091112 CGACAACTGGAGCAGCGAG 61.091 63.158 0.00 0.00 34.37 5.03
2391 2499 2.049156 CGACAACTGGAGCAGCGA 60.049 61.111 0.00 0.00 34.37 4.93
2392 2500 2.356313 ACGACAACTGGAGCAGCG 60.356 61.111 0.00 0.00 34.37 5.18
2395 2503 1.581934 CTTTCACGACAACTGGAGCA 58.418 50.000 0.00 0.00 0.00 4.26
2419 2527 1.935873 CAGCGGTTATCACACATGAGG 59.064 52.381 0.00 0.00 38.57 3.86
2426 2534 4.759693 ACATTTTTCTCAGCGGTTATCACA 59.240 37.500 0.00 0.00 0.00 3.58
2431 2539 4.130857 TGTCACATTTTTCTCAGCGGTTA 58.869 39.130 0.00 0.00 0.00 2.85
2434 2542 3.624326 TTGTCACATTTTTCTCAGCGG 57.376 42.857 0.00 0.00 0.00 5.52
2436 2544 9.118236 GTAGTTATTTGTCACATTTTTCTCAGC 57.882 33.333 0.00 0.00 0.00 4.26
2447 2555 6.518493 ACGGAAGAAGTAGTTATTTGTCACA 58.482 36.000 0.00 0.00 0.00 3.58
2461 2569 8.979534 AGACTTATATTTAGGAACGGAAGAAGT 58.020 33.333 0.00 0.00 0.00 3.01
2462 2570 9.819267 AAGACTTATATTTAGGAACGGAAGAAG 57.181 33.333 0.00 0.00 0.00 2.85
2495 2603 9.311916 GCTCTGTATGTAGATCATAATGGAATC 57.688 37.037 0.00 0.00 40.21 2.52
2496 2604 8.819845 TGCTCTGTATGTAGATCATAATGGAAT 58.180 33.333 0.00 0.00 40.21 3.01
2497 2605 8.193953 TGCTCTGTATGTAGATCATAATGGAA 57.806 34.615 0.00 0.00 40.21 3.53
2498 2606 7.781324 TGCTCTGTATGTAGATCATAATGGA 57.219 36.000 0.00 0.00 40.21 3.41
2499 2607 8.837788 TTTGCTCTGTATGTAGATCATAATGG 57.162 34.615 0.00 0.00 40.21 3.16
2503 2611 9.702494 CTCATTTTGCTCTGTATGTAGATCATA 57.298 33.333 0.00 0.00 37.91 2.15
2504 2612 8.209584 ACTCATTTTGCTCTGTATGTAGATCAT 58.790 33.333 0.00 0.00 40.25 2.45
2505 2613 7.493645 CACTCATTTTGCTCTGTATGTAGATCA 59.506 37.037 0.00 0.00 0.00 2.92
2506 2614 7.708322 TCACTCATTTTGCTCTGTATGTAGATC 59.292 37.037 0.00 0.00 0.00 2.75
2507 2615 7.559486 TCACTCATTTTGCTCTGTATGTAGAT 58.441 34.615 0.00 0.00 0.00 1.98
2508 2616 6.935167 TCACTCATTTTGCTCTGTATGTAGA 58.065 36.000 0.00 0.00 0.00 2.59
2509 2617 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
2510 2618 8.043113 AGATTCACTCATTTTGCTCTGTATGTA 58.957 33.333 0.00 0.00 0.00 2.29
2511 2619 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
2512 2620 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
2513 2621 8.043113 TGTAGATTCACTCATTTTGCTCTGTAT 58.957 33.333 0.00 0.00 0.00 2.29
2514 2622 7.331934 GTGTAGATTCACTCATTTTGCTCTGTA 59.668 37.037 0.00 0.00 35.68 2.74
2515 2623 6.148480 GTGTAGATTCACTCATTTTGCTCTGT 59.852 38.462 0.00 0.00 35.68 3.41
2516 2624 6.370994 AGTGTAGATTCACTCATTTTGCTCTG 59.629 38.462 0.00 0.00 44.07 3.35
2517 2625 6.471146 AGTGTAGATTCACTCATTTTGCTCT 58.529 36.000 0.00 0.00 44.07 4.09
2518 2626 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2556 2664 9.917129 CCATTACAAACTACATACGGATGTATA 57.083 33.333 20.64 7.39 45.42 1.47
2557 2665 8.644216 TCCATTACAAACTACATACGGATGTAT 58.356 33.333 20.64 8.38 45.42 2.29
2558 2666 8.009622 TCCATTACAAACTACATACGGATGTA 57.990 34.615 19.32 19.32 44.77 2.29
2560 2668 7.780008 TTCCATTACAAACTACATACGGATG 57.220 36.000 5.94 5.94 39.16 3.51
2561 2669 7.660208 GGATTCCATTACAAACTACATACGGAT 59.340 37.037 0.00 0.00 0.00 4.18
2562 2670 6.987992 GGATTCCATTACAAACTACATACGGA 59.012 38.462 0.00 0.00 0.00 4.69
2563 2671 6.204108 GGGATTCCATTACAAACTACATACGG 59.796 42.308 4.80 0.00 0.00 4.02
2564 2672 6.990349 AGGGATTCCATTACAAACTACATACG 59.010 38.462 4.80 0.00 34.83 3.06
2565 2673 9.841295 TTAGGGATTCCATTACAAACTACATAC 57.159 33.333 4.80 0.00 34.83 2.39
2567 2675 9.762381 TTTTAGGGATTCCATTACAAACTACAT 57.238 29.630 4.80 0.00 34.83 2.29
2568 2676 9.589461 TTTTTAGGGATTCCATTACAAACTACA 57.411 29.630 4.80 0.00 34.83 2.74
2571 2679 8.803235 GTCTTTTTAGGGATTCCATTACAAACT 58.197 33.333 4.80 0.00 34.83 2.66
2572 2680 8.803235 AGTCTTTTTAGGGATTCCATTACAAAC 58.197 33.333 4.80 0.00 34.83 2.93
2573 2681 8.950007 AGTCTTTTTAGGGATTCCATTACAAA 57.050 30.769 4.80 2.19 34.83 2.83
2574 2682 8.950007 AAGTCTTTTTAGGGATTCCATTACAA 57.050 30.769 4.80 0.00 34.83 2.41
2591 2699 9.907229 CCCTCTGTTCCTAAATATAAGTCTTTT 57.093 33.333 0.00 0.00 0.00 2.27
2592 2700 9.280456 TCCCTCTGTTCCTAAATATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
2593 2701 8.855804 TCCCTCTGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
2594 2702 8.068733 ACTCCCTCTGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
2595 2703 8.252624 ACTCCCTCTGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
2596 2704 9.900112 ATACTCCCTCTGTTCCTAAATATAAGT 57.100 33.333 0.00 0.00 0.00 2.24
2600 2708 9.845214 ATGTATACTCCCTCTGTTCCTAAATAT 57.155 33.333 4.17 0.00 0.00 1.28
2601 2709 9.670442 AATGTATACTCCCTCTGTTCCTAAATA 57.330 33.333 4.17 0.00 0.00 1.40
2602 2710 8.568617 AATGTATACTCCCTCTGTTCCTAAAT 57.431 34.615 4.17 0.00 0.00 1.40
2603 2711 7.989947 AATGTATACTCCCTCTGTTCCTAAA 57.010 36.000 4.17 0.00 0.00 1.85
2604 2712 9.670442 AATAATGTATACTCCCTCTGTTCCTAA 57.330 33.333 4.17 0.00 0.00 2.69
2606 2714 9.845214 ATAATAATGTATACTCCCTCTGTTCCT 57.155 33.333 4.17 0.00 0.00 3.36
2629 2737 9.974980 GGGAGTATGAACTTTGAAACAAAATAA 57.025 29.630 0.00 0.00 35.56 1.40
2630 2738 9.362151 AGGGAGTATGAACTTTGAAACAAAATA 57.638 29.630 0.00 0.00 35.56 1.40
2631 2739 8.250143 AGGGAGTATGAACTTTGAAACAAAAT 57.750 30.769 0.00 0.00 35.56 1.82
2632 2740 7.654022 AGGGAGTATGAACTTTGAAACAAAA 57.346 32.000 0.00 0.00 35.56 2.44
2633 2741 7.340743 TCAAGGGAGTATGAACTTTGAAACAAA 59.659 33.333 0.00 0.00 35.56 2.83
2634 2742 6.831353 TCAAGGGAGTATGAACTTTGAAACAA 59.169 34.615 0.00 0.00 35.56 2.83
2635 2743 6.262273 GTCAAGGGAGTATGAACTTTGAAACA 59.738 38.462 0.00 0.00 33.77 2.83
2636 2744 6.262273 TGTCAAGGGAGTATGAACTTTGAAAC 59.738 38.462 0.00 0.00 33.77 2.78
2637 2745 6.361433 TGTCAAGGGAGTATGAACTTTGAAA 58.639 36.000 0.00 0.00 33.77 2.69
2638 2746 5.935945 TGTCAAGGGAGTATGAACTTTGAA 58.064 37.500 0.00 0.00 33.77 2.69
2639 2747 5.560722 TGTCAAGGGAGTATGAACTTTGA 57.439 39.130 0.00 0.00 35.56 2.69
2640 2748 6.824305 AATGTCAAGGGAGTATGAACTTTG 57.176 37.500 0.00 0.00 35.56 2.77
2641 2749 9.533831 AATTAATGTCAAGGGAGTATGAACTTT 57.466 29.630 0.00 0.00 35.56 2.66
2642 2750 9.178758 GAATTAATGTCAAGGGAGTATGAACTT 57.821 33.333 0.00 0.00 35.56 2.66
2643 2751 8.328758 TGAATTAATGTCAAGGGAGTATGAACT 58.671 33.333 0.00 0.00 39.21 3.01
2644 2752 8.506168 TGAATTAATGTCAAGGGAGTATGAAC 57.494 34.615 0.00 0.00 0.00 3.18
2645 2753 9.527157 TTTGAATTAATGTCAAGGGAGTATGAA 57.473 29.630 10.74 0.00 36.41 2.57
2646 2754 9.527157 TTTTGAATTAATGTCAAGGGAGTATGA 57.473 29.630 10.74 0.00 36.41 2.15
2647 2755 9.573133 GTTTTGAATTAATGTCAAGGGAGTATG 57.427 33.333 10.74 0.00 36.41 2.39
2648 2756 9.533831 AGTTTTGAATTAATGTCAAGGGAGTAT 57.466 29.630 10.74 0.00 36.41 2.12
2649 2757 8.792633 CAGTTTTGAATTAATGTCAAGGGAGTA 58.207 33.333 10.74 0.00 36.41 2.59
2650 2758 7.661040 CAGTTTTGAATTAATGTCAAGGGAGT 58.339 34.615 10.74 5.16 36.41 3.85
2651 2759 6.587608 GCAGTTTTGAATTAATGTCAAGGGAG 59.412 38.462 10.74 6.76 36.41 4.30
2652 2760 6.454795 GCAGTTTTGAATTAATGTCAAGGGA 58.545 36.000 10.74 3.32 36.41 4.20
2653 2761 5.345741 CGCAGTTTTGAATTAATGTCAAGGG 59.654 40.000 10.74 6.60 36.41 3.95
2654 2762 6.088085 GTCGCAGTTTTGAATTAATGTCAAGG 59.912 38.462 10.74 6.32 36.41 3.61
2655 2763 6.636447 TGTCGCAGTTTTGAATTAATGTCAAG 59.364 34.615 10.74 4.45 36.41 3.02
2656 2764 6.416455 GTGTCGCAGTTTTGAATTAATGTCAA 59.584 34.615 8.21 8.21 33.21 3.18
2657 2765 5.912396 GTGTCGCAGTTTTGAATTAATGTCA 59.088 36.000 0.00 0.00 0.00 3.58
2658 2766 6.142817 AGTGTCGCAGTTTTGAATTAATGTC 58.857 36.000 0.00 0.00 0.00 3.06
2659 2767 6.072112 AGTGTCGCAGTTTTGAATTAATGT 57.928 33.333 0.00 0.00 0.00 2.71
2660 2768 6.991485 AAGTGTCGCAGTTTTGAATTAATG 57.009 33.333 0.00 0.00 0.00 1.90
2661 2769 7.871853 AGTAAGTGTCGCAGTTTTGAATTAAT 58.128 30.769 5.46 0.00 0.00 1.40
2662 2770 7.254227 AGTAAGTGTCGCAGTTTTGAATTAA 57.746 32.000 5.46 0.00 0.00 1.40
2663 2771 6.854496 AGTAAGTGTCGCAGTTTTGAATTA 57.146 33.333 5.46 0.00 0.00 1.40
2664 2772 5.751243 AGTAAGTGTCGCAGTTTTGAATT 57.249 34.783 5.46 0.00 0.00 2.17
2665 2773 5.751243 AAGTAAGTGTCGCAGTTTTGAAT 57.249 34.783 5.46 0.00 0.00 2.57
2666 2774 5.106475 ACAAAGTAAGTGTCGCAGTTTTGAA 60.106 36.000 12.84 0.00 0.00 2.69
2667 2775 4.393680 ACAAAGTAAGTGTCGCAGTTTTGA 59.606 37.500 12.84 0.00 0.00 2.69
2668 2776 4.658071 ACAAAGTAAGTGTCGCAGTTTTG 58.342 39.130 5.46 6.88 0.00 2.44
2669 2777 4.957759 ACAAAGTAAGTGTCGCAGTTTT 57.042 36.364 5.46 0.00 0.00 2.43
2670 2778 4.510340 CCTACAAAGTAAGTGTCGCAGTTT 59.490 41.667 5.46 0.00 0.00 2.66
2671 2779 4.056050 CCTACAAAGTAAGTGTCGCAGTT 58.944 43.478 5.48 5.48 0.00 3.16
2672 2780 3.554337 CCCTACAAAGTAAGTGTCGCAGT 60.554 47.826 0.00 0.00 0.00 4.40
2673 2781 2.993899 CCCTACAAAGTAAGTGTCGCAG 59.006 50.000 0.00 0.00 0.00 5.18
2674 2782 2.629137 TCCCTACAAAGTAAGTGTCGCA 59.371 45.455 0.00 0.00 0.00 5.10
2675 2783 3.251571 CTCCCTACAAAGTAAGTGTCGC 58.748 50.000 0.00 0.00 0.00 5.19
2676 2784 4.516365 ACTCCCTACAAAGTAAGTGTCG 57.484 45.455 0.00 0.00 0.00 4.35
2677 2785 6.587206 AGTACTCCCTACAAAGTAAGTGTC 57.413 41.667 0.00 0.00 30.18 3.67
2678 2786 7.465116 TCTAGTACTCCCTACAAAGTAAGTGT 58.535 38.462 0.00 0.00 30.18 3.55
2679 2787 7.934855 TCTAGTACTCCCTACAAAGTAAGTG 57.065 40.000 0.00 0.00 30.18 3.16
2680 2788 9.625747 GTATCTAGTACTCCCTACAAAGTAAGT 57.374 37.037 0.00 0.00 30.18 2.24
2681 2789 9.850198 AGTATCTAGTACTCCCTACAAAGTAAG 57.150 37.037 0.00 0.00 39.46 2.34
2702 2810 7.978975 AGACACAAGCTTTCTAATGAGAGTATC 59.021 37.037 0.00 0.00 31.77 2.24
2703 2811 7.846066 AGACACAAGCTTTCTAATGAGAGTAT 58.154 34.615 0.00 0.00 31.77 2.12
2704 2812 7.233389 AGACACAAGCTTTCTAATGAGAGTA 57.767 36.000 0.00 0.00 31.77 2.59
2705 2813 6.107901 AGACACAAGCTTTCTAATGAGAGT 57.892 37.500 0.00 0.00 31.77 3.24
2706 2814 8.715191 ATTAGACACAAGCTTTCTAATGAGAG 57.285 34.615 22.49 2.23 39.84 3.20
2707 2815 8.535335 AGATTAGACACAAGCTTTCTAATGAGA 58.465 33.333 25.90 6.92 40.87 3.27
2708 2816 8.715191 AGATTAGACACAAGCTTTCTAATGAG 57.285 34.615 25.90 6.66 40.87 2.90
2709 2817 8.939929 CAAGATTAGACACAAGCTTTCTAATGA 58.060 33.333 25.90 7.49 40.87 2.57
2710 2818 8.725148 ACAAGATTAGACACAAGCTTTCTAATG 58.275 33.333 25.90 18.97 40.87 1.90
2711 2819 8.854614 ACAAGATTAGACACAAGCTTTCTAAT 57.145 30.769 23.00 23.00 42.61 1.73
2712 2820 9.944376 ATACAAGATTAGACACAAGCTTTCTAA 57.056 29.630 17.31 17.31 32.03 2.10
2713 2821 9.944376 AATACAAGATTAGACACAAGCTTTCTA 57.056 29.630 0.00 0.00 32.03 2.10
2714 2822 8.854614 AATACAAGATTAGACACAAGCTTTCT 57.145 30.769 0.00 0.00 32.03 2.52
2715 2823 9.899226 AAAATACAAGATTAGACACAAGCTTTC 57.101 29.630 0.00 0.00 32.03 2.62
2731 2839 9.513906 TCACTTCCACATCATTAAAATACAAGA 57.486 29.630 0.00 0.00 0.00 3.02
2732 2840 9.559958 GTCACTTCCACATCATTAAAATACAAG 57.440 33.333 0.00 0.00 0.00 3.16
2733 2841 8.233868 CGTCACTTCCACATCATTAAAATACAA 58.766 33.333 0.00 0.00 0.00 2.41
2734 2842 7.148323 CCGTCACTTCCACATCATTAAAATACA 60.148 37.037 0.00 0.00 0.00 2.29
2735 2843 7.065324 TCCGTCACTTCCACATCATTAAAATAC 59.935 37.037 0.00 0.00 0.00 1.89
2736 2844 7.106890 TCCGTCACTTCCACATCATTAAAATA 58.893 34.615 0.00 0.00 0.00 1.40
2737 2845 5.943416 TCCGTCACTTCCACATCATTAAAAT 59.057 36.000 0.00 0.00 0.00 1.82
2738 2846 5.309638 TCCGTCACTTCCACATCATTAAAA 58.690 37.500 0.00 0.00 0.00 1.52
2739 2847 4.900684 TCCGTCACTTCCACATCATTAAA 58.099 39.130 0.00 0.00 0.00 1.52
2740 2848 4.503910 CTCCGTCACTTCCACATCATTAA 58.496 43.478 0.00 0.00 0.00 1.40
2741 2849 3.118775 CCTCCGTCACTTCCACATCATTA 60.119 47.826 0.00 0.00 0.00 1.90
2742 2850 2.355108 CCTCCGTCACTTCCACATCATT 60.355 50.000 0.00 0.00 0.00 2.57
2743 2851 1.208052 CCTCCGTCACTTCCACATCAT 59.792 52.381 0.00 0.00 0.00 2.45
2744 2852 0.608130 CCTCCGTCACTTCCACATCA 59.392 55.000 0.00 0.00 0.00 3.07
2745 2853 0.741221 GCCTCCGTCACTTCCACATC 60.741 60.000 0.00 0.00 0.00 3.06
2746 2854 1.296715 GCCTCCGTCACTTCCACAT 59.703 57.895 0.00 0.00 0.00 3.21
2747 2855 1.691195 TTGCCTCCGTCACTTCCACA 61.691 55.000 0.00 0.00 0.00 4.17
2748 2856 0.321653 ATTGCCTCCGTCACTTCCAC 60.322 55.000 0.00 0.00 0.00 4.02
2749 2857 0.400213 AATTGCCTCCGTCACTTCCA 59.600 50.000 0.00 0.00 0.00 3.53
2750 2858 1.087501 GAATTGCCTCCGTCACTTCC 58.912 55.000 0.00 0.00 0.00 3.46
2751 2859 1.734465 CTGAATTGCCTCCGTCACTTC 59.266 52.381 0.00 0.00 0.00 3.01
2752 2860 1.347707 TCTGAATTGCCTCCGTCACTT 59.652 47.619 0.00 0.00 0.00 3.16
2753 2861 0.976641 TCTGAATTGCCTCCGTCACT 59.023 50.000 0.00 0.00 0.00 3.41
2754 2862 2.029838 ATCTGAATTGCCTCCGTCAC 57.970 50.000 0.00 0.00 0.00 3.67
2755 2863 2.158957 GGTATCTGAATTGCCTCCGTCA 60.159 50.000 0.00 0.00 0.00 4.35
2756 2864 2.158957 TGGTATCTGAATTGCCTCCGTC 60.159 50.000 0.00 0.00 0.00 4.79
2757 2865 1.837439 TGGTATCTGAATTGCCTCCGT 59.163 47.619 0.00 0.00 0.00 4.69
2758 2866 2.158900 AGTGGTATCTGAATTGCCTCCG 60.159 50.000 0.00 0.00 0.00 4.63
2759 2867 3.567478 AGTGGTATCTGAATTGCCTCC 57.433 47.619 0.00 0.00 0.00 4.30
2760 2868 7.573968 AAAATAGTGGTATCTGAATTGCCTC 57.426 36.000 0.00 0.00 0.00 4.70
2761 2869 7.961326 AAAAATAGTGGTATCTGAATTGCCT 57.039 32.000 0.00 0.00 0.00 4.75
2805 2913 9.529823 AAAGGAATGTGCTATCATATGATGAAT 57.470 29.630 25.44 10.40 43.50 2.57
2806 2914 8.929260 AAAGGAATGTGCTATCATATGATGAA 57.071 30.769 25.44 8.09 43.50 2.57
2807 2915 9.440773 GTAAAGGAATGTGCTATCATATGATGA 57.559 33.333 25.44 8.75 44.55 2.92
2808 2916 9.223099 TGTAAAGGAATGTGCTATCATATGATG 57.777 33.333 25.44 16.60 36.05 3.07
2809 2917 9.797642 TTGTAAAGGAATGTGCTATCATATGAT 57.202 29.630 21.50 21.50 38.51 2.45
2810 2918 9.276590 CTTGTAAAGGAATGTGCTATCATATGA 57.723 33.333 8.10 8.10 41.27 2.15
2826 2934 7.936847 ATGTAGTTCATCACAACTTGTAAAGGA 59.063 33.333 0.00 0.00 39.54 3.36
2827 2935 8.099364 ATGTAGTTCATCACAACTTGTAAAGG 57.901 34.615 0.00 0.00 39.54 3.11
2842 2950 2.587060 TCCCCCTGGATGTAGTTCAT 57.413 50.000 0.00 0.00 39.77 2.57
2852 2960 3.228176 CTGTGATTCAGATCCCCCTGGA 61.228 54.545 0.00 0.00 46.27 3.86
2853 2961 1.142465 CTGTGATTCAGATCCCCCTGG 59.858 57.143 0.00 0.00 46.27 4.45
2854 2962 2.121948 TCTGTGATTCAGATCCCCCTG 58.878 52.381 0.00 0.00 46.77 4.45
2855 2963 2.575921 TCTGTGATTCAGATCCCCCT 57.424 50.000 0.00 0.00 46.77 4.79
2863 2971 2.732412 ACCGACTGTCTGTGATTCAG 57.268 50.000 3.98 0.00 44.85 3.02
2864 2972 2.364002 TCAACCGACTGTCTGTGATTCA 59.636 45.455 5.62 0.00 0.00 2.57
2865 2973 3.026630 TCAACCGACTGTCTGTGATTC 57.973 47.619 5.62 0.00 0.00 2.52
2866 2974 3.244215 ACATCAACCGACTGTCTGTGATT 60.244 43.478 5.62 1.71 0.00 2.57
2867 2975 2.300152 ACATCAACCGACTGTCTGTGAT 59.700 45.455 5.62 8.37 0.00 3.06
2868 2976 1.686587 ACATCAACCGACTGTCTGTGA 59.313 47.619 5.62 6.53 0.00 3.58
2869 2977 2.154854 ACATCAACCGACTGTCTGTG 57.845 50.000 5.62 1.36 0.00 3.66
2870 2978 2.365617 AGAACATCAACCGACTGTCTGT 59.634 45.455 6.21 2.36 0.00 3.41
2871 2979 3.032017 AGAACATCAACCGACTGTCTG 57.968 47.619 6.21 1.64 0.00 3.51
2872 2980 4.866508 TTAGAACATCAACCGACTGTCT 57.133 40.909 6.21 0.00 0.00 3.41
2873 2981 4.989168 AGTTTAGAACATCAACCGACTGTC 59.011 41.667 0.00 0.00 0.00 3.51
2874 2982 4.750098 CAGTTTAGAACATCAACCGACTGT 59.250 41.667 0.00 0.00 0.00 3.55
2875 2983 4.988540 TCAGTTTAGAACATCAACCGACTG 59.011 41.667 0.00 0.00 34.76 3.51
2876 2984 5.209818 TCAGTTTAGAACATCAACCGACT 57.790 39.130 0.00 0.00 0.00 4.18
2877 2985 5.917541 TTCAGTTTAGAACATCAACCGAC 57.082 39.130 0.00 0.00 0.00 4.79
2878 2986 5.049680 GCTTTCAGTTTAGAACATCAACCGA 60.050 40.000 0.00 0.00 0.00 4.69
2879 2987 5.147162 GCTTTCAGTTTAGAACATCAACCG 58.853 41.667 0.00 0.00 0.00 4.44
2880 2988 6.072112 TGCTTTCAGTTTAGAACATCAACC 57.928 37.500 0.00 0.00 0.00 3.77
2881 2989 7.862372 TCAATGCTTTCAGTTTAGAACATCAAC 59.138 33.333 0.00 0.00 0.00 3.18
2882 2990 7.939782 TCAATGCTTTCAGTTTAGAACATCAA 58.060 30.769 0.00 0.00 0.00 2.57
2883 2991 7.445096 TCTCAATGCTTTCAGTTTAGAACATCA 59.555 33.333 0.00 0.00 0.00 3.07
2884 2992 7.810658 TCTCAATGCTTTCAGTTTAGAACATC 58.189 34.615 0.00 0.00 0.00 3.06
2885 2993 7.446625 ACTCTCAATGCTTTCAGTTTAGAACAT 59.553 33.333 0.00 0.00 0.00 2.71
2886 2994 6.767902 ACTCTCAATGCTTTCAGTTTAGAACA 59.232 34.615 0.00 0.00 0.00 3.18
2887 2995 7.074502 CACTCTCAATGCTTTCAGTTTAGAAC 58.925 38.462 0.00 0.00 0.00 3.01
2888 2996 6.767902 ACACTCTCAATGCTTTCAGTTTAGAA 59.232 34.615 0.00 0.00 0.00 2.10
2889 2997 6.203530 CACACTCTCAATGCTTTCAGTTTAGA 59.796 38.462 0.00 0.00 0.00 2.10
2890 2998 6.203530 TCACACTCTCAATGCTTTCAGTTTAG 59.796 38.462 0.00 0.00 0.00 1.85
2891 2999 6.054941 TCACACTCTCAATGCTTTCAGTTTA 58.945 36.000 0.00 0.00 0.00 2.01
2892 3000 4.883585 TCACACTCTCAATGCTTTCAGTTT 59.116 37.500 0.00 0.00 0.00 2.66
2893 3001 4.454678 TCACACTCTCAATGCTTTCAGTT 58.545 39.130 0.00 0.00 0.00 3.16
2894 3002 4.063689 CTCACACTCTCAATGCTTTCAGT 58.936 43.478 0.00 0.00 0.00 3.41
2895 3003 3.120269 GCTCACACTCTCAATGCTTTCAG 60.120 47.826 0.00 0.00 0.00 3.02
2896 3004 2.810274 GCTCACACTCTCAATGCTTTCA 59.190 45.455 0.00 0.00 0.00 2.69
2897 3005 2.810274 TGCTCACACTCTCAATGCTTTC 59.190 45.455 0.00 0.00 0.00 2.62
2898 3006 2.854963 TGCTCACACTCTCAATGCTTT 58.145 42.857 0.00 0.00 0.00 3.51
2899 3007 2.556144 TGCTCACACTCTCAATGCTT 57.444 45.000 0.00 0.00 0.00 3.91
2900 3008 2.783609 ATGCTCACACTCTCAATGCT 57.216 45.000 0.00 0.00 0.00 3.79
2901 3009 2.871022 CCTATGCTCACACTCTCAATGC 59.129 50.000 0.00 0.00 0.00 3.56
2902 3010 3.133542 TCCCTATGCTCACACTCTCAATG 59.866 47.826 0.00 0.00 0.00 2.82
2903 3011 3.378512 TCCCTATGCTCACACTCTCAAT 58.621 45.455 0.00 0.00 0.00 2.57
2904 3012 2.762887 CTCCCTATGCTCACACTCTCAA 59.237 50.000 0.00 0.00 0.00 3.02
2905 3013 2.382882 CTCCCTATGCTCACACTCTCA 58.617 52.381 0.00 0.00 0.00 3.27
2906 3014 1.686052 CCTCCCTATGCTCACACTCTC 59.314 57.143 0.00 0.00 0.00 3.20
2907 3015 1.007721 ACCTCCCTATGCTCACACTCT 59.992 52.381 0.00 0.00 0.00 3.24
2908 3016 1.490574 ACCTCCCTATGCTCACACTC 58.509 55.000 0.00 0.00 0.00 3.51
2909 3017 2.848678 TACCTCCCTATGCTCACACT 57.151 50.000 0.00 0.00 0.00 3.55
2910 3018 4.423625 AAATACCTCCCTATGCTCACAC 57.576 45.455 0.00 0.00 0.00 3.82
2911 3019 6.101150 ACATAAAATACCTCCCTATGCTCACA 59.899 38.462 0.00 0.00 0.00 3.58
2912 3020 6.534634 ACATAAAATACCTCCCTATGCTCAC 58.465 40.000 0.00 0.00 0.00 3.51
2913 3021 6.763715 ACATAAAATACCTCCCTATGCTCA 57.236 37.500 0.00 0.00 0.00 4.26
2914 3022 7.040409 CCAAACATAAAATACCTCCCTATGCTC 60.040 40.741 0.00 0.00 0.00 4.26
2915 3023 6.777580 CCAAACATAAAATACCTCCCTATGCT 59.222 38.462 0.00 0.00 0.00 3.79
2916 3024 6.015434 CCCAAACATAAAATACCTCCCTATGC 60.015 42.308 0.00 0.00 0.00 3.14
2917 3025 6.493458 CCCCAAACATAAAATACCTCCCTATG 59.507 42.308 0.00 0.00 0.00 2.23
2918 3026 6.394640 TCCCCAAACATAAAATACCTCCCTAT 59.605 38.462 0.00 0.00 0.00 2.57
2919 3027 5.737113 TCCCCAAACATAAAATACCTCCCTA 59.263 40.000 0.00 0.00 0.00 3.53
2920 3028 4.546605 TCCCCAAACATAAAATACCTCCCT 59.453 41.667 0.00 0.00 0.00 4.20
2921 3029 4.874199 TCCCCAAACATAAAATACCTCCC 58.126 43.478 0.00 0.00 0.00 4.30
2922 3030 5.955959 ACTTCCCCAAACATAAAATACCTCC 59.044 40.000 0.00 0.00 0.00 4.30
2923 3031 7.201670 CGTACTTCCCCAAACATAAAATACCTC 60.202 40.741 0.00 0.00 0.00 3.85
2924 3032 6.600427 CGTACTTCCCCAAACATAAAATACCT 59.400 38.462 0.00 0.00 0.00 3.08
2925 3033 6.598850 TCGTACTTCCCCAAACATAAAATACC 59.401 38.462 0.00 0.00 0.00 2.73
2926 3034 7.614124 TCGTACTTCCCCAAACATAAAATAC 57.386 36.000 0.00 0.00 0.00 1.89
2927 3035 7.337436 CCTTCGTACTTCCCCAAACATAAAATA 59.663 37.037 0.00 0.00 0.00 1.40
2928 3036 6.152154 CCTTCGTACTTCCCCAAACATAAAAT 59.848 38.462 0.00 0.00 0.00 1.82
2929 3037 5.474189 CCTTCGTACTTCCCCAAACATAAAA 59.526 40.000 0.00 0.00 0.00 1.52
2930 3038 5.005094 CCTTCGTACTTCCCCAAACATAAA 58.995 41.667 0.00 0.00 0.00 1.40
2931 3039 4.286549 TCCTTCGTACTTCCCCAAACATAA 59.713 41.667 0.00 0.00 0.00 1.90
2932 3040 3.839490 TCCTTCGTACTTCCCCAAACATA 59.161 43.478 0.00 0.00 0.00 2.29
2933 3041 2.640826 TCCTTCGTACTTCCCCAAACAT 59.359 45.455 0.00 0.00 0.00 2.71
2934 3042 2.048601 TCCTTCGTACTTCCCCAAACA 58.951 47.619 0.00 0.00 0.00 2.83
2935 3043 2.845363 TCCTTCGTACTTCCCCAAAC 57.155 50.000 0.00 0.00 0.00 2.93
2936 3044 3.860968 TTTCCTTCGTACTTCCCCAAA 57.139 42.857 0.00 0.00 0.00 3.28
2937 3045 3.860968 TTTTCCTTCGTACTTCCCCAA 57.139 42.857 0.00 0.00 0.00 4.12
2938 3046 3.391955 TCTTTTTCCTTCGTACTTCCCCA 59.608 43.478 0.00 0.00 0.00 4.96
2939 3047 4.011966 TCTTTTTCCTTCGTACTTCCCC 57.988 45.455 0.00 0.00 0.00 4.81
2940 3048 6.570672 AAATCTTTTTCCTTCGTACTTCCC 57.429 37.500 0.00 0.00 0.00 3.97
2941 3049 7.645402 TCAAAATCTTTTTCCTTCGTACTTCC 58.355 34.615 0.00 0.00 0.00 3.46
2942 3050 9.678941 ATTCAAAATCTTTTTCCTTCGTACTTC 57.321 29.630 0.00 0.00 0.00 3.01
2946 3054 8.760569 GCAAATTCAAAATCTTTTTCCTTCGTA 58.239 29.630 0.00 0.00 0.00 3.43
2947 3055 7.254761 GGCAAATTCAAAATCTTTTTCCTTCGT 60.255 33.333 0.00 0.00 0.00 3.85
2948 3056 7.041848 AGGCAAATTCAAAATCTTTTTCCTTCG 60.042 33.333 0.00 0.00 0.00 3.79
2949 3057 8.158169 AGGCAAATTCAAAATCTTTTTCCTTC 57.842 30.769 0.00 0.00 0.00 3.46
2950 3058 8.523915 AAGGCAAATTCAAAATCTTTTTCCTT 57.476 26.923 0.00 0.00 0.00 3.36
2951 3059 8.523915 AAAGGCAAATTCAAAATCTTTTTCCT 57.476 26.923 0.00 0.00 0.00 3.36
2952 3060 7.862372 GGAAAGGCAAATTCAAAATCTTTTTCC 59.138 33.333 0.00 0.00 34.07 3.13
2953 3061 7.862372 GGGAAAGGCAAATTCAAAATCTTTTTC 59.138 33.333 0.00 0.00 0.00 2.29
2954 3062 7.560991 AGGGAAAGGCAAATTCAAAATCTTTTT 59.439 29.630 0.00 0.00 0.00 1.94
2955 3063 7.062322 AGGGAAAGGCAAATTCAAAATCTTTT 58.938 30.769 0.00 0.00 0.00 2.27
2956 3064 6.604171 AGGGAAAGGCAAATTCAAAATCTTT 58.396 32.000 0.00 0.00 0.00 2.52
2957 3065 6.191657 AGGGAAAGGCAAATTCAAAATCTT 57.808 33.333 0.00 0.00 0.00 2.40
2958 3066 5.830799 AGGGAAAGGCAAATTCAAAATCT 57.169 34.783 0.00 0.00 0.00 2.40
2959 3067 6.882610 AAAGGGAAAGGCAAATTCAAAATC 57.117 33.333 0.00 0.00 0.00 2.17
2960 3068 7.201902 GGAAAAAGGGAAAGGCAAATTCAAAAT 60.202 33.333 0.00 0.00 0.00 1.82
2961 3069 6.096141 GGAAAAAGGGAAAGGCAAATTCAAAA 59.904 34.615 0.00 0.00 0.00 2.44
2962 3070 5.592282 GGAAAAAGGGAAAGGCAAATTCAAA 59.408 36.000 0.00 0.00 0.00 2.69
2963 3071 5.129634 GGAAAAAGGGAAAGGCAAATTCAA 58.870 37.500 0.00 0.00 0.00 2.69
2964 3072 4.713553 GGAAAAAGGGAAAGGCAAATTCA 58.286 39.130 0.00 0.00 0.00 2.57
2965 3073 3.745975 CGGAAAAAGGGAAAGGCAAATTC 59.254 43.478 0.00 0.00 0.00 2.17
2966 3074 3.135712 ACGGAAAAAGGGAAAGGCAAATT 59.864 39.130 0.00 0.00 0.00 1.82
2967 3075 2.703536 ACGGAAAAAGGGAAAGGCAAAT 59.296 40.909 0.00 0.00 0.00 2.32
2968 3076 2.112190 ACGGAAAAAGGGAAAGGCAAA 58.888 42.857 0.00 0.00 0.00 3.68
2969 3077 1.783071 ACGGAAAAAGGGAAAGGCAA 58.217 45.000 0.00 0.00 0.00 4.52
2970 3078 1.783071 AACGGAAAAAGGGAAAGGCA 58.217 45.000 0.00 0.00 0.00 4.75
2971 3079 3.151554 TCTAACGGAAAAAGGGAAAGGC 58.848 45.455 0.00 0.00 0.00 4.35
2972 3080 5.777850 TTTCTAACGGAAAAAGGGAAAGG 57.222 39.130 0.00 0.00 40.51 3.11
2994 3102 8.971073 CCTGTAGGGATTTTGATTGAGTTATTT 58.029 33.333 0.00 0.00 37.23 1.40
2995 3103 8.336235 TCCTGTAGGGATTTTGATTGAGTTATT 58.664 33.333 0.00 0.00 39.58 1.40
2996 3104 7.872138 TCCTGTAGGGATTTTGATTGAGTTAT 58.128 34.615 0.00 0.00 39.58 1.89
2997 3105 7.265599 TCCTGTAGGGATTTTGATTGAGTTA 57.734 36.000 0.00 0.00 39.58 2.24
2998 3106 6.139679 TCCTGTAGGGATTTTGATTGAGTT 57.860 37.500 0.00 0.00 39.58 3.01
2999 3107 5.779241 TCCTGTAGGGATTTTGATTGAGT 57.221 39.130 0.00 0.00 39.58 3.41
3000 3108 6.460676 GCATTCCTGTAGGGATTTTGATTGAG 60.461 42.308 0.00 0.00 44.66 3.02
3001 3109 5.360714 GCATTCCTGTAGGGATTTTGATTGA 59.639 40.000 0.00 0.00 44.66 2.57
3002 3110 5.452356 GGCATTCCTGTAGGGATTTTGATTG 60.452 44.000 0.00 0.00 44.66 2.67
3003 3111 4.651045 GGCATTCCTGTAGGGATTTTGATT 59.349 41.667 0.00 0.00 44.66 2.57
3004 3112 4.218312 GGCATTCCTGTAGGGATTTTGAT 58.782 43.478 0.00 0.00 44.66 2.57
3005 3113 3.011144 TGGCATTCCTGTAGGGATTTTGA 59.989 43.478 0.00 0.00 44.66 2.69
3006 3114 3.364549 TGGCATTCCTGTAGGGATTTTG 58.635 45.455 0.00 0.00 44.66 2.44
3007 3115 3.756082 TGGCATTCCTGTAGGGATTTT 57.244 42.857 0.00 0.00 44.66 1.82
3008 3116 3.979501 ATGGCATTCCTGTAGGGATTT 57.020 42.857 0.00 0.00 44.66 2.17
3009 3117 3.464833 AGAATGGCATTCCTGTAGGGATT 59.535 43.478 31.08 10.44 44.66 3.01
3010 3118 3.059097 AGAATGGCATTCCTGTAGGGAT 58.941 45.455 31.08 11.12 44.66 3.85
3011 3119 2.492025 AGAATGGCATTCCTGTAGGGA 58.508 47.619 31.08 0.00 43.41 4.20
3012 3120 2.954318 CAAGAATGGCATTCCTGTAGGG 59.046 50.000 31.08 12.85 40.13 3.53
3013 3121 3.624777 ACAAGAATGGCATTCCTGTAGG 58.375 45.455 32.53 19.74 40.96 3.18
3014 3122 6.319658 ACATAACAAGAATGGCATTCCTGTAG 59.680 38.462 33.23 27.61 41.67 2.74
3015 3123 6.186957 ACATAACAAGAATGGCATTCCTGTA 58.813 36.000 33.23 23.97 41.67 2.74
3016 3124 5.018809 ACATAACAAGAATGGCATTCCTGT 58.981 37.500 29.74 29.74 43.70 4.00
3017 3125 5.587388 ACATAACAAGAATGGCATTCCTG 57.413 39.130 31.08 29.78 40.13 3.86
3018 3126 7.902920 ATTACATAACAAGAATGGCATTCCT 57.097 32.000 31.08 19.64 40.13 3.36
3019 3127 7.439056 CCAATTACATAACAAGAATGGCATTCC 59.561 37.037 31.08 16.59 40.13 3.01
3020 3128 8.196771 TCCAATTACATAACAAGAATGGCATTC 58.803 33.333 28.54 28.54 39.56 2.67
3021 3129 8.076910 TCCAATTACATAACAAGAATGGCATT 57.923 30.769 13.54 13.54 0.00 3.56
3022 3130 7.342799 ACTCCAATTACATAACAAGAATGGCAT 59.657 33.333 0.00 0.00 0.00 4.40
3023 3131 6.663093 ACTCCAATTACATAACAAGAATGGCA 59.337 34.615 0.00 0.00 0.00 4.92
3024 3132 7.100458 ACTCCAATTACATAACAAGAATGGC 57.900 36.000 0.00 0.00 0.00 4.40
3041 3149 9.561069 CAGGTTAAACTAAGCATATACTCCAAT 57.439 33.333 0.00 0.00 38.57 3.16
3042 3150 8.545472 ACAGGTTAAACTAAGCATATACTCCAA 58.455 33.333 0.00 0.00 38.57 3.53
3043 3151 8.086143 ACAGGTTAAACTAAGCATATACTCCA 57.914 34.615 0.00 0.00 38.57 3.86
3062 3170 9.520515 AGAACAGAATCAAAACATATACAGGTT 57.479 29.630 0.00 0.00 0.00 3.50
3063 3171 9.520515 AAGAACAGAATCAAAACATATACAGGT 57.479 29.630 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.