Multiple sequence alignment - TraesCS2D01G149700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G149700 chr2D 100.000 4530 0 0 1 4530 91681657 91677128 0.000000e+00 8366
1 TraesCS2D01G149700 chr2D 98.798 2246 23 3 1965 4208 2324910 2327153 0.000000e+00 3995
2 TraesCS2D01G149700 chr2D 98.353 2247 24 4 1969 4207 467569870 467572111 0.000000e+00 3932
3 TraesCS2D01G149700 chr2D 96.324 1850 34 9 148 1964 2322631 2324479 0.000000e+00 3009
4 TraesCS2D01G149700 chr2D 95.673 1849 45 8 148 1964 467567590 467569435 0.000000e+00 2939
5 TraesCS2D01G149700 chr2D 95.996 1024 20 4 734 1736 29157451 29156428 0.000000e+00 1644
6 TraesCS2D01G149700 chr2D 96.758 586 13 4 146 727 632147700 632148283 0.000000e+00 972
7 TraesCS2D01G149700 chr2D 98.630 219 1 1 1748 1964 29158589 29158807 1.980000e-103 387
8 TraesCS2D01G149700 chr7D 98.841 2243 24 2 1968 4208 31620063 31617821 0.000000e+00 3997
9 TraesCS2D01G149700 chr7D 98.483 2242 21 5 1968 4207 3851442 3849212 0.000000e+00 3940
10 TraesCS2D01G149700 chr7D 96.744 1843 34 6 148 1964 627157593 627159435 0.000000e+00 3048
11 TraesCS2D01G149700 chr7D 97.706 1700 27 7 2245 3940 627159809 627161500 0.000000e+00 2913
12 TraesCS2D01G149700 chr7D 96.393 1303 23 5 685 1964 3853181 3851880 0.000000e+00 2124
13 TraesCS2D01G149700 chr7D 99.202 877 7 0 1968 2844 31623663 31622787 0.000000e+00 1581
14 TraesCS2D01G149700 chr7D 95.177 933 21 5 615 1523 31621079 31620147 0.000000e+00 1452
15 TraesCS2D01G149700 chr7D 95.070 933 22 5 615 1523 31624679 31623747 0.000000e+00 1447
16 TraesCS2D01G149700 chr7D 98.665 674 7 2 3536 4208 521315424 521314752 0.000000e+00 1194
17 TraesCS2D01G149700 chr7D 98.514 673 9 1 3536 4207 46336533 46335861 0.000000e+00 1186
18 TraesCS2D01G149700 chr7D 97.423 582 13 2 147 727 633761652 633761072 0.000000e+00 990
19 TraesCS2D01G149700 chr7D 97.523 323 8 0 4208 4530 66734147 66733825 1.840000e-153 553
20 TraesCS2D01G149700 chr3D 98.620 2247 26 4 1965 4208 3487461 3489705 0.000000e+00 3973
21 TraesCS2D01G149700 chr3D 95.851 1663 34 10 333 1964 3485360 3487018 0.000000e+00 2656
22 TraesCS2D01G149700 chr3D 98.532 1090 13 2 2234 3321 493199384 493200472 0.000000e+00 1921
23 TraesCS2D01G149700 chr3D 98.660 746 10 0 815 1560 493198469 493199214 0.000000e+00 1323
24 TraesCS2D01G149700 chr3D 96.923 585 15 3 144 727 544721824 544721242 0.000000e+00 977
25 TraesCS2D01G149700 chr3D 96.918 584 13 5 147 727 28250949 28251530 0.000000e+00 974
26 TraesCS2D01G149700 chr3D 97.833 323 7 0 4208 4530 359926185 359926507 3.960000e-155 558
27 TraesCS2D01G149700 chr3D 98.802 167 0 2 1658 1824 493199211 493199375 3.430000e-76 296
28 TraesCS2D01G149700 chr3D 97.987 149 3 0 1 149 162200237 162200089 4.500000e-65 259
29 TraesCS2D01G149700 chr3D 97.987 149 3 0 1 149 231097862 231097714 4.500000e-65 259
30 TraesCS2D01G149700 chr3D 97.315 149 4 0 1 149 59738683 59738831 2.090000e-63 254
31 TraesCS2D01G149700 chr3D 96.129 155 6 0 1 155 146423765 146423611 2.090000e-63 254
32 TraesCS2D01G149700 chr3D 97.315 149 4 0 1 149 359926041 359926189 2.090000e-63 254
33 TraesCS2D01G149700 chrUn 98.351 2244 25 6 1965 4207 10380129 10382361 0.000000e+00 3928
34 TraesCS2D01G149700 chrUn 98.627 1821 23 2 2279 4098 370108327 370106508 0.000000e+00 3223
35 TraesCS2D01G149700 chrUn 94.153 1847 57 19 147 1964 10377872 10379696 0.000000e+00 2765
36 TraesCS2D01G149700 chr1D 97.727 2244 20 3 1965 4207 4060787 4063000 0.000000e+00 3832
37 TraesCS2D01G149700 chr1D 96.158 1848 39 10 148 1964 4058506 4060352 0.000000e+00 2990
38 TraesCS2D01G149700 chr6D 98.227 677 10 1 3533 4207 226226344 226225668 0.000000e+00 1182
39 TraesCS2D01G149700 chr6D 98.142 323 6 0 4208 4530 111264307 111264629 8.510000e-157 564
40 TraesCS2D01G149700 chr6D 97.214 323 9 0 4208 4530 7839290 7838968 8.570000e-152 547
41 TraesCS2D01G149700 chr6D 96.129 155 6 0 1 155 25192294 25192140 2.090000e-63 254
42 TraesCS2D01G149700 chr6D 97.315 149 4 0 1 149 351218004 351218152 2.090000e-63 254
43 TraesCS2D01G149700 chr4D 96.913 583 13 5 147 727 508052566 508053145 0.000000e+00 972
44 TraesCS2D01G149700 chr4D 97.214 323 9 0 4208 4530 436847710 436847388 8.570000e-152 547
45 TraesCS2D01G149700 chr4D 96.129 155 6 0 1 155 336204289 336204135 2.090000e-63 254
46 TraesCS2D01G149700 chr5D 98.452 323 5 0 4208 4530 358730521 358730843 1.830000e-158 569
47 TraesCS2D01G149700 chr5D 97.523 323 8 0 4208 4530 118190763 118191085 1.840000e-153 553
48 TraesCS2D01G149700 chr5D 97.214 323 9 0 4208 4530 317004972 317004650 8.570000e-152 547
49 TraesCS2D01G149700 chr5D 97.214 323 9 0 4208 4530 352488397 352488719 8.570000e-152 547
50 TraesCS2D01G149700 chr5D 97.315 149 4 0 1 149 472093355 472093503 2.090000e-63 254
51 TraesCS2D01G149700 chr6A 87.150 428 39 11 1965 2389 3113407 3113821 5.300000e-129 472
52 TraesCS2D01G149700 chr2B 91.818 220 14 3 1748 1964 46883610 46883828 2.050000e-78 303


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G149700 chr2D 91677128 91681657 4529 True 8366.00 8366 100.000000 1 4530 1 chr2D.!!$R2 4529
1 TraesCS2D01G149700 chr2D 2322631 2327153 4522 False 3502.00 3995 97.561000 148 4208 2 chr2D.!!$F3 4060
2 TraesCS2D01G149700 chr2D 467567590 467572111 4521 False 3435.50 3932 97.013000 148 4207 2 chr2D.!!$F4 4059
3 TraesCS2D01G149700 chr2D 29156428 29157451 1023 True 1644.00 1644 95.996000 734 1736 1 chr2D.!!$R1 1002
4 TraesCS2D01G149700 chr2D 632147700 632148283 583 False 972.00 972 96.758000 146 727 1 chr2D.!!$F2 581
5 TraesCS2D01G149700 chr7D 3849212 3853181 3969 True 3032.00 3940 97.438000 685 4207 2 chr7D.!!$R5 3522
6 TraesCS2D01G149700 chr7D 627157593 627161500 3907 False 2980.50 3048 97.225000 148 3940 2 chr7D.!!$F1 3792
7 TraesCS2D01G149700 chr7D 31617821 31624679 6858 True 2119.25 3997 97.072500 615 4208 4 chr7D.!!$R6 3593
8 TraesCS2D01G149700 chr7D 521314752 521315424 672 True 1194.00 1194 98.665000 3536 4208 1 chr7D.!!$R3 672
9 TraesCS2D01G149700 chr7D 46335861 46336533 672 True 1186.00 1186 98.514000 3536 4207 1 chr7D.!!$R1 671
10 TraesCS2D01G149700 chr7D 633761072 633761652 580 True 990.00 990 97.423000 147 727 1 chr7D.!!$R4 580
11 TraesCS2D01G149700 chr3D 3485360 3489705 4345 False 3314.50 3973 97.235500 333 4208 2 chr3D.!!$F3 3875
12 TraesCS2D01G149700 chr3D 493198469 493200472 2003 False 1180.00 1921 98.664667 815 3321 3 chr3D.!!$F5 2506
13 TraesCS2D01G149700 chr3D 544721242 544721824 582 True 977.00 977 96.923000 144 727 1 chr3D.!!$R4 583
14 TraesCS2D01G149700 chr3D 28250949 28251530 581 False 974.00 974 96.918000 147 727 1 chr3D.!!$F1 580
15 TraesCS2D01G149700 chrUn 10377872 10382361 4489 False 3346.50 3928 96.252000 147 4207 2 chrUn.!!$F1 4060
16 TraesCS2D01G149700 chrUn 370106508 370108327 1819 True 3223.00 3223 98.627000 2279 4098 1 chrUn.!!$R1 1819
17 TraesCS2D01G149700 chr1D 4058506 4063000 4494 False 3411.00 3832 96.942500 148 4207 2 chr1D.!!$F1 4059
18 TraesCS2D01G149700 chr6D 226225668 226226344 676 True 1182.00 1182 98.227000 3533 4207 1 chr6D.!!$R3 674
19 TraesCS2D01G149700 chr4D 508052566 508053145 579 False 972.00 972 96.913000 147 727 1 chr4D.!!$F1 580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.178068 GCTGAACCGGATGCTCCTTA 59.822 55.0 9.46 0.0 33.30 2.69 F
102 103 0.249398 TACCTTCTTCCTTGCGCTCC 59.751 55.0 9.73 0.0 0.00 4.70 F
934 4571 0.530744 CTCACGGTTTCTGATCGGGA 59.469 55.0 0.62 0.0 34.97 5.14 F
1378 5015 0.644843 CAGCGTTGTTGGTTTTGCAC 59.355 50.0 0.00 0.0 0.00 4.57 F
2433 6528 2.304180 CCTCTTCTTCTCCAAGCCTTCA 59.696 50.0 0.00 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1645 5282 0.981183 TAACAAGCTGGTCCACCGAT 59.019 50.000 0.00 0.0 39.43 4.18 R
1730 5370 3.632145 AGTGTACAAGCTGGGACAAAAAG 59.368 43.478 8.06 0.0 38.70 2.27 R
2591 6686 1.808411 TTTGCCAACCGTCTCAGATC 58.192 50.000 0.00 0.0 0.00 2.75 R
3043 7142 4.470334 AGGCAGTCTCTCTGAAAAGATC 57.530 45.455 0.00 0.0 46.27 2.75 R
4420 8649 0.027586 CTAAGCCGGCGTGCATAAAC 59.972 55.000 25.89 0.0 0.00 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.234019 TGCCAATGCGGATACCAC 57.766 55.556 0.00 0.00 41.78 4.16
22 23 1.607071 TGCCAATGCGGATACCACT 59.393 52.632 0.00 0.00 41.78 4.00
23 24 0.747644 TGCCAATGCGGATACCACTG 60.748 55.000 0.00 0.00 41.78 3.66
24 25 2.024918 CCAATGCGGATACCACTGC 58.975 57.895 0.00 0.00 41.89 4.40
25 26 0.464373 CCAATGCGGATACCACTGCT 60.464 55.000 0.00 0.00 42.03 4.24
26 27 1.382522 CAATGCGGATACCACTGCTT 58.617 50.000 0.00 0.00 42.03 3.91
27 28 1.064505 CAATGCGGATACCACTGCTTG 59.935 52.381 0.00 0.00 42.03 4.01
39 40 2.775890 CACTGCTTGGACTCAATGAGT 58.224 47.619 16.70 16.70 46.42 3.41
40 41 3.930336 CACTGCTTGGACTCAATGAGTA 58.070 45.455 16.71 0.00 43.53 2.59
41 42 3.681897 CACTGCTTGGACTCAATGAGTAC 59.318 47.826 18.36 18.36 43.53 2.73
42 43 3.580458 ACTGCTTGGACTCAATGAGTACT 59.420 43.478 24.44 2.18 43.46 2.73
43 44 4.040952 ACTGCTTGGACTCAATGAGTACTT 59.959 41.667 24.44 0.00 43.46 2.24
44 45 4.569943 TGCTTGGACTCAATGAGTACTTC 58.430 43.478 24.44 14.17 43.46 3.01
45 46 3.614616 GCTTGGACTCAATGAGTACTTCG 59.385 47.826 24.44 14.08 43.46 3.79
46 47 3.232213 TGGACTCAATGAGTACTTCGC 57.768 47.619 24.44 7.92 43.46 4.70
47 48 2.826128 TGGACTCAATGAGTACTTCGCT 59.174 45.455 24.44 0.00 43.46 4.93
48 49 3.182967 GGACTCAATGAGTACTTCGCTG 58.817 50.000 17.96 0.00 43.53 5.18
49 50 3.119459 GGACTCAATGAGTACTTCGCTGA 60.119 47.826 17.96 0.00 43.53 4.26
50 51 3.839293 ACTCAATGAGTACTTCGCTGAC 58.161 45.455 15.09 0.00 41.51 3.51
51 52 3.255888 ACTCAATGAGTACTTCGCTGACA 59.744 43.478 15.09 0.00 41.51 3.58
52 53 4.081972 ACTCAATGAGTACTTCGCTGACAT 60.082 41.667 15.09 0.00 41.51 3.06
53 54 5.125578 ACTCAATGAGTACTTCGCTGACATA 59.874 40.000 15.09 0.00 41.51 2.29
54 55 5.961272 TCAATGAGTACTTCGCTGACATAA 58.039 37.500 0.00 0.00 0.00 1.90
55 56 6.573434 TCAATGAGTACTTCGCTGACATAAT 58.427 36.000 0.00 0.00 0.00 1.28
56 57 7.712797 TCAATGAGTACTTCGCTGACATAATA 58.287 34.615 0.00 0.00 0.00 0.98
57 58 8.194769 TCAATGAGTACTTCGCTGACATAATAA 58.805 33.333 0.00 0.00 0.00 1.40
58 59 8.817100 CAATGAGTACTTCGCTGACATAATAAA 58.183 33.333 0.00 0.00 0.00 1.40
59 60 7.751047 TGAGTACTTCGCTGACATAATAAAC 57.249 36.000 0.00 0.00 0.00 2.01
60 61 6.755141 TGAGTACTTCGCTGACATAATAAACC 59.245 38.462 0.00 0.00 0.00 3.27
61 62 5.747197 AGTACTTCGCTGACATAATAAACCG 59.253 40.000 0.00 0.00 0.00 4.44
62 63 3.869246 ACTTCGCTGACATAATAAACCGG 59.131 43.478 0.00 0.00 0.00 5.28
63 64 2.206750 TCGCTGACATAATAAACCGGC 58.793 47.619 0.00 0.00 0.00 6.13
64 65 1.263217 CGCTGACATAATAAACCGGCC 59.737 52.381 0.00 0.00 0.00 6.13
65 66 1.263217 GCTGACATAATAAACCGGCCG 59.737 52.381 21.04 21.04 0.00 6.13
66 67 1.263217 CTGACATAATAAACCGGCCGC 59.737 52.381 22.85 1.11 0.00 6.53
67 68 1.134340 TGACATAATAAACCGGCCGCT 60.134 47.619 22.85 2.01 0.00 5.52
68 69 1.263217 GACATAATAAACCGGCCGCTG 59.737 52.381 22.85 10.24 0.00 5.18
69 70 1.134340 ACATAATAAACCGGCCGCTGA 60.134 47.619 22.85 1.43 0.00 4.26
70 71 1.944024 CATAATAAACCGGCCGCTGAA 59.056 47.619 22.85 5.12 0.00 3.02
71 72 1.371595 TAATAAACCGGCCGCTGAAC 58.628 50.000 22.85 0.00 0.00 3.18
72 73 1.310216 AATAAACCGGCCGCTGAACC 61.310 55.000 22.85 0.00 0.00 3.62
81 82 2.892425 CGCTGAACCGGATGCTCC 60.892 66.667 9.46 0.00 0.00 4.70
82 83 2.586792 GCTGAACCGGATGCTCCT 59.413 61.111 9.46 0.00 33.30 3.69
83 84 1.078143 GCTGAACCGGATGCTCCTT 60.078 57.895 9.46 0.00 33.30 3.36
84 85 0.178068 GCTGAACCGGATGCTCCTTA 59.822 55.000 9.46 0.00 33.30 2.69
85 86 1.941325 CTGAACCGGATGCTCCTTAC 58.059 55.000 9.46 0.00 33.30 2.34
86 87 0.539986 TGAACCGGATGCTCCTTACC 59.460 55.000 9.46 0.00 33.30 2.85
87 88 0.831307 GAACCGGATGCTCCTTACCT 59.169 55.000 9.46 0.00 33.30 3.08
88 89 1.209747 GAACCGGATGCTCCTTACCTT 59.790 52.381 9.46 0.00 33.30 3.50
89 90 0.831307 ACCGGATGCTCCTTACCTTC 59.169 55.000 9.46 0.00 33.30 3.46
90 91 1.123928 CCGGATGCTCCTTACCTTCT 58.876 55.000 0.00 0.00 33.30 2.85
91 92 1.486726 CCGGATGCTCCTTACCTTCTT 59.513 52.381 0.00 0.00 33.30 2.52
92 93 2.483889 CCGGATGCTCCTTACCTTCTTC 60.484 54.545 0.00 0.00 33.30 2.87
93 94 2.483889 CGGATGCTCCTTACCTTCTTCC 60.484 54.545 1.51 0.00 33.30 3.46
94 95 2.774809 GGATGCTCCTTACCTTCTTCCT 59.225 50.000 0.00 0.00 32.53 3.36
95 96 3.201045 GGATGCTCCTTACCTTCTTCCTT 59.799 47.826 0.00 0.00 32.53 3.36
96 97 3.703001 TGCTCCTTACCTTCTTCCTTG 57.297 47.619 0.00 0.00 0.00 3.61
97 98 2.290323 TGCTCCTTACCTTCTTCCTTGC 60.290 50.000 0.00 0.00 0.00 4.01
98 99 2.622436 CTCCTTACCTTCTTCCTTGCG 58.378 52.381 0.00 0.00 0.00 4.85
99 100 1.087501 CCTTACCTTCTTCCTTGCGC 58.912 55.000 0.00 0.00 0.00 6.09
100 101 1.339151 CCTTACCTTCTTCCTTGCGCT 60.339 52.381 9.73 0.00 0.00 5.92
101 102 2.003301 CTTACCTTCTTCCTTGCGCTC 58.997 52.381 9.73 0.00 0.00 5.03
102 103 0.249398 TACCTTCTTCCTTGCGCTCC 59.751 55.000 9.73 0.00 0.00 4.70
103 104 1.003355 CCTTCTTCCTTGCGCTCCA 60.003 57.895 9.73 0.00 0.00 3.86
104 105 1.301677 CCTTCTTCCTTGCGCTCCAC 61.302 60.000 9.73 0.00 0.00 4.02
105 106 1.301677 CTTCTTCCTTGCGCTCCACC 61.302 60.000 9.73 0.00 0.00 4.61
106 107 2.032528 CTTCCTTGCGCTCCACCA 59.967 61.111 9.73 0.00 0.00 4.17
107 108 2.281484 TTCCTTGCGCTCCACCAC 60.281 61.111 9.73 0.00 0.00 4.16
108 109 3.842925 TTCCTTGCGCTCCACCACC 62.843 63.158 9.73 0.00 0.00 4.61
109 110 4.641645 CCTTGCGCTCCACCACCA 62.642 66.667 9.73 0.00 0.00 4.17
110 111 3.357079 CTTGCGCTCCACCACCAC 61.357 66.667 9.73 0.00 0.00 4.16
119 120 4.562425 CACCACCACGGCCACACT 62.562 66.667 2.24 0.00 39.03 3.55
120 121 4.562425 ACCACCACGGCCACACTG 62.562 66.667 2.24 0.00 39.03 3.66
121 122 4.248842 CCACCACGGCCACACTGA 62.249 66.667 2.24 0.00 0.00 3.41
122 123 2.972505 CACCACGGCCACACTGAC 60.973 66.667 2.24 0.00 0.00 3.51
123 124 4.602259 ACCACGGCCACACTGACG 62.602 66.667 2.24 0.00 0.00 4.35
129 130 3.044305 GCCACACTGACGGCTCAC 61.044 66.667 0.00 0.00 45.29 3.51
139 140 3.463505 CGGCTCACGTGTTAGCAG 58.536 61.111 25.19 19.48 40.61 4.24
140 141 2.730672 CGGCTCACGTGTTAGCAGC 61.731 63.158 25.19 20.68 40.61 5.25
141 142 2.391389 GGCTCACGTGTTAGCAGCC 61.391 63.158 24.24 24.24 40.61 4.85
142 143 1.667830 GCTCACGTGTTAGCAGCCA 60.668 57.895 20.80 0.00 38.63 4.75
143 144 1.901650 GCTCACGTGTTAGCAGCCAC 61.902 60.000 20.80 0.00 38.63 5.01
144 145 0.599991 CTCACGTGTTAGCAGCCACA 60.600 55.000 16.51 0.00 0.00 4.17
258 259 4.038162 ACCTTCTGATACGCCATTAGAGTC 59.962 45.833 0.00 0.00 31.43 3.36
277 278 2.864343 GTCGAAACTACTAATGGCGCAT 59.136 45.455 10.83 0.00 0.00 4.73
279 280 2.097396 CGAAACTACTAATGGCGCATCG 60.097 50.000 10.83 0.00 0.00 3.84
761 4377 4.355588 TCCTCTATCCTCTTCTCCCCTAAG 59.644 50.000 0.00 0.00 0.00 2.18
934 4571 0.530744 CTCACGGTTTCTGATCGGGA 59.469 55.000 0.62 0.00 34.97 5.14
1223 4860 1.777878 TGGAAGGGAGTTTTGTGGCTA 59.222 47.619 0.00 0.00 0.00 3.93
1241 4878 2.878406 GCTAGATTTGGCCGAAGCAATA 59.122 45.455 22.79 6.75 42.56 1.90
1261 4898 0.828022 TGTCGAACAGTTGGTGGTCT 59.172 50.000 0.00 0.00 41.26 3.85
1274 4911 1.301401 TGGTCTGTACGTGCTTGCC 60.301 57.895 4.97 4.76 0.00 4.52
1378 5015 0.644843 CAGCGTTGTTGGTTTTGCAC 59.355 50.000 0.00 0.00 0.00 4.57
1645 5282 2.685388 TGTTCTGCAATTGGTCGAACAA 59.315 40.909 19.88 19.88 40.43 2.83
2433 6528 2.304180 CCTCTTCTTCTCCAAGCCTTCA 59.696 50.000 0.00 0.00 0.00 3.02
2564 6659 8.221944 TCAGTTAAAGAACTCCCCAGATTTTTA 58.778 33.333 0.00 0.00 44.39 1.52
2591 6686 8.669243 GTTCATAGTTTCTCACCCTTTATCAAG 58.331 37.037 0.00 0.00 0.00 3.02
2771 6866 2.949177 TTCAGCTTGAGTTTGCCCTA 57.051 45.000 0.00 0.00 0.00 3.53
3552 7651 1.665679 GTTTCATCGTGATGACCGCAT 59.334 47.619 11.91 0.00 46.49 4.73
3763 7888 7.909267 TGTATTCGATGAATCTGTTGTTGATC 58.091 34.615 0.00 0.00 33.95 2.92
4208 8437 5.530243 AGTAGGCCTTTTCCTAGTAGTGAT 58.470 41.667 12.58 0.00 39.85 3.06
4209 8438 6.680540 AGTAGGCCTTTTCCTAGTAGTGATA 58.319 40.000 12.58 0.00 39.85 2.15
4210 8439 5.873146 AGGCCTTTTCCTAGTAGTGATAC 57.127 43.478 0.00 0.00 33.95 2.24
4211 8440 5.278061 AGGCCTTTTCCTAGTAGTGATACA 58.722 41.667 0.00 0.00 33.95 2.29
4212 8441 5.364157 AGGCCTTTTCCTAGTAGTGATACAG 59.636 44.000 0.00 0.00 33.95 2.74
4213 8442 5.051153 GCCTTTTCCTAGTAGTGATACAGC 58.949 45.833 0.00 0.00 0.00 4.40
4214 8443 5.395324 GCCTTTTCCTAGTAGTGATACAGCA 60.395 44.000 0.00 0.00 0.00 4.41
4215 8444 6.640518 CCTTTTCCTAGTAGTGATACAGCAA 58.359 40.000 0.00 0.00 0.00 3.91
4216 8445 7.275920 CCTTTTCCTAGTAGTGATACAGCAAT 58.724 38.462 0.00 0.00 0.00 3.56
4217 8446 8.421784 CCTTTTCCTAGTAGTGATACAGCAATA 58.578 37.037 0.00 0.00 0.00 1.90
4218 8447 9.817809 CTTTTCCTAGTAGTGATACAGCAATAA 57.182 33.333 0.00 0.00 0.00 1.40
4220 8449 9.817809 TTTCCTAGTAGTGATACAGCAATAAAG 57.182 33.333 0.00 0.00 0.00 1.85
4221 8450 7.952671 TCCTAGTAGTGATACAGCAATAAAGG 58.047 38.462 0.00 0.00 30.80 3.11
4222 8451 6.647067 CCTAGTAGTGATACAGCAATAAAGGC 59.353 42.308 0.00 0.00 0.00 4.35
4223 8452 6.240549 AGTAGTGATACAGCAATAAAGGCT 57.759 37.500 0.00 0.00 43.77 4.58
4224 8453 6.284459 AGTAGTGATACAGCAATAAAGGCTC 58.716 40.000 0.00 0.00 40.23 4.70
4225 8454 4.455606 AGTGATACAGCAATAAAGGCTCC 58.544 43.478 0.00 0.00 40.23 4.70
4226 8455 4.164988 AGTGATACAGCAATAAAGGCTCCT 59.835 41.667 0.00 0.00 40.23 3.69
4227 8456 4.884164 GTGATACAGCAATAAAGGCTCCTT 59.116 41.667 0.00 0.00 40.23 3.36
4228 8457 4.883585 TGATACAGCAATAAAGGCTCCTTG 59.116 41.667 1.33 0.00 40.23 3.61
4229 8458 3.160679 ACAGCAATAAAGGCTCCTTGT 57.839 42.857 1.33 0.00 40.23 3.16
4230 8459 3.084786 ACAGCAATAAAGGCTCCTTGTC 58.915 45.455 1.33 0.00 40.23 3.18
4231 8460 3.084039 CAGCAATAAAGGCTCCTTGTCA 58.916 45.455 1.33 0.00 40.23 3.58
4232 8461 3.507233 CAGCAATAAAGGCTCCTTGTCAA 59.493 43.478 1.33 0.00 40.23 3.18
4233 8462 3.507622 AGCAATAAAGGCTCCTTGTCAAC 59.492 43.478 1.33 0.00 36.81 3.18
4234 8463 3.367395 GCAATAAAGGCTCCTTGTCAACC 60.367 47.826 1.33 0.00 36.26 3.77
4235 8464 2.178912 TAAAGGCTCCTTGTCAACCG 57.821 50.000 1.33 0.00 36.26 4.44
4236 8465 0.472471 AAAGGCTCCTTGTCAACCGA 59.528 50.000 1.33 0.00 36.26 4.69
4237 8466 0.472471 AAGGCTCCTTGTCAACCGAA 59.528 50.000 0.00 0.00 34.60 4.30
4238 8467 0.035458 AGGCTCCTTGTCAACCGAAG 59.965 55.000 0.00 0.00 0.00 3.79
4239 8468 1.578206 GGCTCCTTGTCAACCGAAGC 61.578 60.000 0.00 0.00 0.00 3.86
4240 8469 0.884704 GCTCCTTGTCAACCGAAGCA 60.885 55.000 0.00 0.00 0.00 3.91
4241 8470 1.151668 CTCCTTGTCAACCGAAGCAG 58.848 55.000 0.00 0.00 0.00 4.24
4242 8471 0.884704 TCCTTGTCAACCGAAGCAGC 60.885 55.000 0.00 0.00 0.00 5.25
4243 8472 1.165907 CCTTGTCAACCGAAGCAGCA 61.166 55.000 0.00 0.00 0.00 4.41
4244 8473 0.662619 CTTGTCAACCGAAGCAGCAA 59.337 50.000 0.00 0.00 0.00 3.91
4245 8474 0.662619 TTGTCAACCGAAGCAGCAAG 59.337 50.000 0.00 0.00 0.00 4.01
4246 8475 1.165907 TGTCAACCGAAGCAGCAAGG 61.166 55.000 0.00 0.00 0.00 3.61
4247 8476 0.884704 GTCAACCGAAGCAGCAAGGA 60.885 55.000 7.69 0.00 0.00 3.36
4248 8477 0.884704 TCAACCGAAGCAGCAAGGAC 60.885 55.000 7.69 0.00 0.00 3.85
4249 8478 0.886490 CAACCGAAGCAGCAAGGACT 60.886 55.000 7.69 0.00 0.00 3.85
4250 8479 0.886490 AACCGAAGCAGCAAGGACTG 60.886 55.000 7.69 0.00 40.80 3.51
4251 8480 2.037136 CCGAAGCAGCAAGGACTGG 61.037 63.158 0.00 0.00 38.16 4.00
4252 8481 2.037136 CGAAGCAGCAAGGACTGGG 61.037 63.158 0.00 0.00 38.16 4.45
4253 8482 1.676967 GAAGCAGCAAGGACTGGGG 60.677 63.158 0.00 0.00 38.16 4.96
4254 8483 3.215587 AAGCAGCAAGGACTGGGGG 62.216 63.158 0.00 0.00 38.16 5.40
4256 8485 3.655211 CAGCAAGGACTGGGGGCT 61.655 66.667 0.00 0.00 33.85 5.19
4257 8486 3.334054 AGCAAGGACTGGGGGCTC 61.334 66.667 0.00 0.00 0.00 4.70
4258 8487 4.785453 GCAAGGACTGGGGGCTCG 62.785 72.222 0.00 0.00 0.00 5.03
4259 8488 4.101448 CAAGGACTGGGGGCTCGG 62.101 72.222 0.00 0.00 0.00 4.63
4277 8506 3.921257 GCCAGCTGCCTTTTCAAAT 57.079 47.368 8.66 0.00 0.00 2.32
4278 8507 1.718396 GCCAGCTGCCTTTTCAAATC 58.282 50.000 8.66 0.00 0.00 2.17
4279 8508 1.673923 GCCAGCTGCCTTTTCAAATCC 60.674 52.381 8.66 0.00 0.00 3.01
4280 8509 1.897802 CCAGCTGCCTTTTCAAATCCT 59.102 47.619 8.66 0.00 0.00 3.24
4281 8510 2.094338 CCAGCTGCCTTTTCAAATCCTC 60.094 50.000 8.66 0.00 0.00 3.71
4282 8511 2.559668 CAGCTGCCTTTTCAAATCCTCA 59.440 45.455 0.00 0.00 0.00 3.86
4283 8512 3.006110 CAGCTGCCTTTTCAAATCCTCAA 59.994 43.478 0.00 0.00 0.00 3.02
4284 8513 3.642848 AGCTGCCTTTTCAAATCCTCAAA 59.357 39.130 0.00 0.00 0.00 2.69
4285 8514 4.101430 AGCTGCCTTTTCAAATCCTCAAAA 59.899 37.500 0.00 0.00 0.00 2.44
4286 8515 4.450080 GCTGCCTTTTCAAATCCTCAAAAG 59.550 41.667 0.00 0.00 37.03 2.27
4287 8516 4.379652 TGCCTTTTCAAATCCTCAAAAGC 58.620 39.130 0.00 0.00 36.29 3.51
4288 8517 4.141756 TGCCTTTTCAAATCCTCAAAAGCA 60.142 37.500 0.00 0.00 36.29 3.91
4289 8518 4.450080 GCCTTTTCAAATCCTCAAAAGCAG 59.550 41.667 0.00 0.00 36.29 4.24
4290 8519 5.604565 CCTTTTCAAATCCTCAAAAGCAGT 58.395 37.500 0.00 0.00 36.29 4.40
4291 8520 6.738453 GCCTTTTCAAATCCTCAAAAGCAGTA 60.738 38.462 0.00 0.00 36.29 2.74
4292 8521 7.381323 CCTTTTCAAATCCTCAAAAGCAGTAT 58.619 34.615 0.00 0.00 36.29 2.12
4293 8522 7.874528 CCTTTTCAAATCCTCAAAAGCAGTATT 59.125 33.333 0.00 0.00 36.29 1.89
4294 8523 9.912634 CTTTTCAAATCCTCAAAAGCAGTATTA 57.087 29.630 0.00 0.00 32.04 0.98
4295 8524 9.912634 TTTTCAAATCCTCAAAAGCAGTATTAG 57.087 29.630 0.00 0.00 0.00 1.73
4296 8525 7.088589 TCAAATCCTCAAAAGCAGTATTAGC 57.911 36.000 0.00 0.00 0.00 3.09
4297 8526 6.886459 TCAAATCCTCAAAAGCAGTATTAGCT 59.114 34.615 0.00 0.00 45.97 3.32
4298 8527 6.690194 AATCCTCAAAAGCAGTATTAGCTG 57.310 37.500 0.00 0.00 42.53 4.24
4309 8538 5.608676 CAGTATTAGCTGCATCATTCCAG 57.391 43.478 1.02 0.00 0.00 3.86
4310 8539 5.303165 CAGTATTAGCTGCATCATTCCAGA 58.697 41.667 1.02 0.00 0.00 3.86
4311 8540 5.178996 CAGTATTAGCTGCATCATTCCAGAC 59.821 44.000 1.02 0.00 0.00 3.51
4312 8541 3.632643 TTAGCTGCATCATTCCAGACA 57.367 42.857 1.02 0.00 0.00 3.41
4313 8542 2.502142 AGCTGCATCATTCCAGACAA 57.498 45.000 1.02 0.00 0.00 3.18
4314 8543 2.799017 AGCTGCATCATTCCAGACAAA 58.201 42.857 1.02 0.00 0.00 2.83
4315 8544 2.753452 AGCTGCATCATTCCAGACAAAG 59.247 45.455 1.02 0.00 0.00 2.77
4316 8545 2.490903 GCTGCATCATTCCAGACAAAGT 59.509 45.455 0.00 0.00 0.00 2.66
4317 8546 3.427233 GCTGCATCATTCCAGACAAAGTC 60.427 47.826 0.00 0.00 0.00 3.01
4318 8547 3.753815 TGCATCATTCCAGACAAAGTCA 58.246 40.909 0.00 0.00 34.60 3.41
4319 8548 4.338012 TGCATCATTCCAGACAAAGTCAT 58.662 39.130 0.00 0.00 34.60 3.06
4320 8549 4.397103 TGCATCATTCCAGACAAAGTCATC 59.603 41.667 0.00 0.00 34.60 2.92
4321 8550 4.397103 GCATCATTCCAGACAAAGTCATCA 59.603 41.667 0.00 0.00 34.60 3.07
4322 8551 5.448768 GCATCATTCCAGACAAAGTCATCAG 60.449 44.000 0.00 0.00 34.60 2.90
4323 8552 5.233083 TCATTCCAGACAAAGTCATCAGT 57.767 39.130 0.00 0.00 34.60 3.41
4324 8553 5.624159 TCATTCCAGACAAAGTCATCAGTT 58.376 37.500 0.00 0.00 34.60 3.16
4325 8554 6.064060 TCATTCCAGACAAAGTCATCAGTTT 58.936 36.000 0.00 0.00 34.60 2.66
4326 8555 6.547141 TCATTCCAGACAAAGTCATCAGTTTT 59.453 34.615 0.00 0.00 34.60 2.43
4327 8556 6.377327 TTCCAGACAAAGTCATCAGTTTTC 57.623 37.500 0.00 0.00 34.60 2.29
4328 8557 5.684704 TCCAGACAAAGTCATCAGTTTTCT 58.315 37.500 0.00 0.00 34.60 2.52
4329 8558 6.122277 TCCAGACAAAGTCATCAGTTTTCTT 58.878 36.000 0.00 0.00 34.60 2.52
4330 8559 6.260936 TCCAGACAAAGTCATCAGTTTTCTTC 59.739 38.462 0.00 0.00 34.60 2.87
4331 8560 6.038603 CCAGACAAAGTCATCAGTTTTCTTCA 59.961 38.462 0.00 0.00 34.60 3.02
4332 8561 7.255381 CCAGACAAAGTCATCAGTTTTCTTCAT 60.255 37.037 0.00 0.00 34.60 2.57
4333 8562 7.802251 CAGACAAAGTCATCAGTTTTCTTCATC 59.198 37.037 0.00 0.00 34.60 2.92
4334 8563 7.500227 AGACAAAGTCATCAGTTTTCTTCATCA 59.500 33.333 0.00 0.00 34.60 3.07
4335 8564 7.999679 ACAAAGTCATCAGTTTTCTTCATCAA 58.000 30.769 0.00 0.00 0.00 2.57
4336 8565 7.917505 ACAAAGTCATCAGTTTTCTTCATCAAC 59.082 33.333 0.00 0.00 0.00 3.18
4337 8566 7.814264 AAGTCATCAGTTTTCTTCATCAACT 57.186 32.000 0.00 0.00 0.00 3.16
4338 8567 7.199541 AGTCATCAGTTTTCTTCATCAACTG 57.800 36.000 5.13 5.13 45.93 3.16
4339 8568 6.206243 AGTCATCAGTTTTCTTCATCAACTGG 59.794 38.462 10.54 0.00 45.05 4.00
4340 8569 6.016777 GTCATCAGTTTTCTTCATCAACTGGT 60.017 38.462 10.54 1.80 45.05 4.00
4341 8570 7.173218 GTCATCAGTTTTCTTCATCAACTGGTA 59.827 37.037 10.54 0.00 45.05 3.25
4342 8571 6.861065 TCAGTTTTCTTCATCAACTGGTAC 57.139 37.500 10.54 0.00 45.05 3.34
4343 8572 6.353323 TCAGTTTTCTTCATCAACTGGTACA 58.647 36.000 10.54 0.00 45.05 2.90
4344 8573 6.826231 TCAGTTTTCTTCATCAACTGGTACAA 59.174 34.615 10.54 0.00 45.05 2.41
4345 8574 7.502226 TCAGTTTTCTTCATCAACTGGTACAAT 59.498 33.333 10.54 0.00 45.05 2.71
4346 8575 7.592533 CAGTTTTCTTCATCAACTGGTACAATG 59.407 37.037 3.76 0.00 42.47 2.82
4347 8576 6.573664 TTTCTTCATCAACTGGTACAATGG 57.426 37.500 0.00 0.00 38.70 3.16
4348 8577 4.009675 TCTTCATCAACTGGTACAATGGC 58.990 43.478 0.00 0.00 38.70 4.40
4349 8578 3.431673 TCATCAACTGGTACAATGGCA 57.568 42.857 0.00 0.00 38.70 4.92
4350 8579 3.966979 TCATCAACTGGTACAATGGCAT 58.033 40.909 0.00 0.00 38.70 4.40
4351 8580 3.695556 TCATCAACTGGTACAATGGCATG 59.304 43.478 0.00 0.00 38.70 4.06
4352 8581 2.445427 TCAACTGGTACAATGGCATGG 58.555 47.619 0.00 0.00 38.70 3.66
4353 8582 1.135024 CAACTGGTACAATGGCATGGC 60.135 52.381 13.29 13.29 38.70 4.40
4354 8583 0.684153 ACTGGTACAATGGCATGGCC 60.684 55.000 17.72 8.02 45.03 5.36
4355 8584 0.396139 CTGGTACAATGGCATGGCCT 60.396 55.000 17.72 3.55 45.05 5.19
4356 8585 0.040942 TGGTACAATGGCATGGCCTT 59.959 50.000 17.72 10.61 43.33 4.35
4357 8586 1.959508 TGGTACAATGGCATGGCCTTC 60.960 52.381 17.72 2.00 43.33 3.46
4358 8587 4.294584 TGGTACAATGGCATGGCCTTCT 62.295 50.000 17.72 3.49 43.33 2.85
4363 8592 2.440980 GGCATGGCCTTCTCACCC 60.441 66.667 8.35 0.00 46.69 4.61
4364 8593 2.356278 GCATGGCCTTCTCACCCA 59.644 61.111 3.32 0.00 0.00 4.51
4365 8594 1.304381 GCATGGCCTTCTCACCCAA 60.304 57.895 3.32 0.00 31.43 4.12
4366 8595 0.899717 GCATGGCCTTCTCACCCAAA 60.900 55.000 3.32 0.00 31.43 3.28
4367 8596 0.890683 CATGGCCTTCTCACCCAAAC 59.109 55.000 3.32 0.00 31.43 2.93
4368 8597 0.609131 ATGGCCTTCTCACCCAAACG 60.609 55.000 3.32 0.00 31.43 3.60
4369 8598 1.971695 GGCCTTCTCACCCAAACGG 60.972 63.158 0.00 0.00 37.81 4.44
4370 8599 2.626780 GCCTTCTCACCCAAACGGC 61.627 63.158 0.00 0.00 33.26 5.68
4371 8600 1.073199 CCTTCTCACCCAAACGGCT 59.927 57.895 0.00 0.00 33.26 5.52
4372 8601 0.537371 CCTTCTCACCCAAACGGCTT 60.537 55.000 0.00 0.00 33.26 4.35
4373 8602 1.271163 CCTTCTCACCCAAACGGCTTA 60.271 52.381 0.00 0.00 33.26 3.09
4374 8603 2.618045 CCTTCTCACCCAAACGGCTTAT 60.618 50.000 0.00 0.00 33.26 1.73
4375 8604 3.370103 CCTTCTCACCCAAACGGCTTATA 60.370 47.826 0.00 0.00 33.26 0.98
4376 8605 3.985019 TCTCACCCAAACGGCTTATAA 57.015 42.857 0.00 0.00 33.26 0.98
4377 8606 4.289238 TCTCACCCAAACGGCTTATAAA 57.711 40.909 0.00 0.00 33.26 1.40
4378 8607 4.653868 TCTCACCCAAACGGCTTATAAAA 58.346 39.130 0.00 0.00 33.26 1.52
4379 8608 4.456566 TCTCACCCAAACGGCTTATAAAAC 59.543 41.667 0.00 0.00 33.26 2.43
4380 8609 3.188873 TCACCCAAACGGCTTATAAAACG 59.811 43.478 6.85 6.85 33.26 3.60
4381 8610 2.488937 ACCCAAACGGCTTATAAAACGG 59.511 45.455 11.62 3.30 33.26 4.44
4382 8611 2.521996 CCAAACGGCTTATAAAACGGC 58.478 47.619 11.62 0.67 0.00 5.68
4383 8612 2.162809 CCAAACGGCTTATAAAACGGCT 59.837 45.455 11.62 0.00 0.00 5.52
4384 8613 3.366577 CCAAACGGCTTATAAAACGGCTT 60.367 43.478 11.62 3.95 0.00 4.35
4385 8614 4.142643 CCAAACGGCTTATAAAACGGCTTA 60.143 41.667 11.62 0.00 0.00 3.09
4386 8615 5.392286 CAAACGGCTTATAAAACGGCTTAA 58.608 37.500 11.62 0.00 0.00 1.85
4387 8616 5.625921 AACGGCTTATAAAACGGCTTAAA 57.374 34.783 11.62 0.00 0.00 1.52
4388 8617 5.225899 ACGGCTTATAAAACGGCTTAAAG 57.774 39.130 11.62 0.00 0.00 1.85
4389 8618 4.033019 CGGCTTATAAAACGGCTTAAAGC 58.967 43.478 0.00 0.00 41.46 3.51
4390 8619 4.437659 CGGCTTATAAAACGGCTTAAAGCA 60.438 41.667 17.13 0.00 44.75 3.91
4391 8620 5.034797 GGCTTATAAAACGGCTTAAAGCAG 58.965 41.667 17.13 0.00 44.75 4.24
4392 8621 4.499399 GCTTATAAAACGGCTTAAAGCAGC 59.501 41.667 0.00 0.00 44.75 5.25
4393 8622 5.630661 TTATAAAACGGCTTAAAGCAGCA 57.369 34.783 0.00 0.00 44.75 4.41
4394 8623 2.880963 AAAACGGCTTAAAGCAGCAA 57.119 40.000 0.00 0.00 44.75 3.91
4395 8624 3.385193 AAAACGGCTTAAAGCAGCAAT 57.615 38.095 0.00 0.00 44.75 3.56
4396 8625 4.513198 AAAACGGCTTAAAGCAGCAATA 57.487 36.364 0.00 0.00 44.75 1.90
4397 8626 3.487563 AACGGCTTAAAGCAGCAATAC 57.512 42.857 0.00 0.00 44.75 1.89
4398 8627 1.396996 ACGGCTTAAAGCAGCAATACG 59.603 47.619 0.00 0.00 44.75 3.06
4399 8628 1.663643 CGGCTTAAAGCAGCAATACGA 59.336 47.619 0.00 0.00 44.75 3.43
4400 8629 2.536928 CGGCTTAAAGCAGCAATACGAC 60.537 50.000 0.00 0.00 44.75 4.34
4401 8630 2.223272 GGCTTAAAGCAGCAATACGACC 60.223 50.000 0.00 0.00 44.75 4.79
4402 8631 2.223272 GCTTAAAGCAGCAATACGACCC 60.223 50.000 0.00 0.00 41.89 4.46
4403 8632 1.647346 TAAAGCAGCAATACGACCCG 58.353 50.000 0.00 0.00 0.00 5.28
4404 8633 1.644786 AAAGCAGCAATACGACCCGC 61.645 55.000 0.00 0.00 0.00 6.13
4405 8634 3.573491 GCAGCAATACGACCCGCC 61.573 66.667 0.00 0.00 0.00 6.13
4406 8635 2.125310 CAGCAATACGACCCGCCA 60.125 61.111 0.00 0.00 0.00 5.69
4407 8636 1.743623 CAGCAATACGACCCGCCAA 60.744 57.895 0.00 0.00 0.00 4.52
4408 8637 1.449601 AGCAATACGACCCGCCAAG 60.450 57.895 0.00 0.00 0.00 3.61
4409 8638 3.098555 CAATACGACCCGCCAAGC 58.901 61.111 0.00 0.00 0.00 4.01
4422 8651 3.036084 CAAGCGCTGGACGTCGTT 61.036 61.111 12.58 0.00 46.11 3.85
4423 8652 2.279918 AAGCGCTGGACGTCGTTT 60.280 55.556 12.58 0.00 46.11 3.60
4424 8653 1.007038 AAGCGCTGGACGTCGTTTA 60.007 52.632 12.58 0.00 46.11 2.01
4425 8654 0.389426 AAGCGCTGGACGTCGTTTAT 60.389 50.000 12.58 0.00 46.11 1.40
4426 8655 1.076533 AGCGCTGGACGTCGTTTATG 61.077 55.000 10.39 0.00 46.11 1.90
4427 8656 1.343821 CGCTGGACGTCGTTTATGC 59.656 57.895 9.92 6.28 36.87 3.14
4428 8657 1.348538 CGCTGGACGTCGTTTATGCA 61.349 55.000 9.92 0.00 36.87 3.96
4429 8658 0.094730 GCTGGACGTCGTTTATGCAC 59.905 55.000 9.92 0.00 0.00 4.57
4430 8659 0.365523 CTGGACGTCGTTTATGCACG 59.634 55.000 9.92 0.00 41.78 5.34
4431 8660 1.058284 GGACGTCGTTTATGCACGC 59.942 57.895 9.92 0.00 40.14 5.34
4432 8661 1.058284 GACGTCGTTTATGCACGCC 59.942 57.895 0.00 0.00 40.14 5.68
4433 8662 2.019476 CGTCGTTTATGCACGCCG 59.981 61.111 0.00 0.00 40.14 6.46
4434 8663 2.398036 GTCGTTTATGCACGCCGG 59.602 61.111 0.00 0.00 40.14 6.13
4435 8664 3.492545 TCGTTTATGCACGCCGGC 61.493 61.111 19.07 19.07 40.14 6.13
4436 8665 3.496131 CGTTTATGCACGCCGGCT 61.496 61.111 26.68 7.77 32.43 5.52
4437 8666 2.874751 GTTTATGCACGCCGGCTT 59.125 55.556 26.68 13.70 34.04 4.35
4438 8667 1.697772 CGTTTATGCACGCCGGCTTA 61.698 55.000 26.68 8.12 32.43 3.09
4439 8668 0.027586 GTTTATGCACGCCGGCTTAG 59.972 55.000 26.68 15.01 34.04 2.18
4440 8669 1.711060 TTTATGCACGCCGGCTTAGC 61.711 55.000 26.68 24.28 34.04 3.09
4453 8682 2.998316 GCTTAGCCAGAGAGGTGATT 57.002 50.000 0.00 0.00 40.61 2.57
4454 8683 2.559440 GCTTAGCCAGAGAGGTGATTG 58.441 52.381 0.00 0.00 40.61 2.67
4455 8684 2.559440 CTTAGCCAGAGAGGTGATTGC 58.441 52.381 0.00 0.00 40.61 3.56
4456 8685 0.833287 TAGCCAGAGAGGTGATTGCC 59.167 55.000 0.00 0.00 40.61 4.52
4457 8686 0.913451 AGCCAGAGAGGTGATTGCCT 60.913 55.000 0.00 0.00 42.53 4.75
4458 8687 0.034670 GCCAGAGAGGTGATTGCCTT 60.035 55.000 0.00 0.00 39.34 4.35
4459 8688 1.747709 CCAGAGAGGTGATTGCCTTG 58.252 55.000 0.00 0.00 39.34 3.61
4460 8689 1.280133 CCAGAGAGGTGATTGCCTTGA 59.720 52.381 0.00 0.00 39.34 3.02
4461 8690 2.092538 CCAGAGAGGTGATTGCCTTGAT 60.093 50.000 0.00 0.00 39.34 2.57
4462 8691 3.204526 CAGAGAGGTGATTGCCTTGATC 58.795 50.000 0.00 0.00 39.34 2.92
4463 8692 3.113824 AGAGAGGTGATTGCCTTGATCT 58.886 45.455 0.00 0.00 39.34 2.75
4464 8693 3.522750 AGAGAGGTGATTGCCTTGATCTT 59.477 43.478 0.00 0.00 39.34 2.40
4465 8694 3.876320 GAGAGGTGATTGCCTTGATCTTC 59.124 47.826 0.00 0.00 39.34 2.87
4466 8695 3.522750 AGAGGTGATTGCCTTGATCTTCT 59.477 43.478 0.00 0.00 39.34 2.85
4467 8696 3.876320 GAGGTGATTGCCTTGATCTTCTC 59.124 47.826 0.00 0.00 39.34 2.87
4468 8697 2.948315 GGTGATTGCCTTGATCTTCTCC 59.052 50.000 0.00 0.00 0.00 3.71
4469 8698 2.611292 GTGATTGCCTTGATCTTCTCCG 59.389 50.000 0.00 0.00 0.00 4.63
4470 8699 2.216898 GATTGCCTTGATCTTCTCCGG 58.783 52.381 0.00 0.00 0.00 5.14
4471 8700 0.253044 TTGCCTTGATCTTCTCCGGG 59.747 55.000 0.00 0.00 0.00 5.73
4472 8701 0.909610 TGCCTTGATCTTCTCCGGGT 60.910 55.000 0.00 0.00 0.00 5.28
4473 8702 0.253327 GCCTTGATCTTCTCCGGGTT 59.747 55.000 0.00 0.00 0.00 4.11
4474 8703 1.485066 GCCTTGATCTTCTCCGGGTTA 59.515 52.381 0.00 0.00 0.00 2.85
4475 8704 2.483889 GCCTTGATCTTCTCCGGGTTAG 60.484 54.545 0.00 0.00 0.00 2.34
4476 8705 2.483889 CCTTGATCTTCTCCGGGTTAGC 60.484 54.545 0.00 0.00 0.00 3.09
4477 8706 2.160721 TGATCTTCTCCGGGTTAGCT 57.839 50.000 0.00 0.00 0.00 3.32
4478 8707 2.467880 TGATCTTCTCCGGGTTAGCTT 58.532 47.619 0.00 0.00 0.00 3.74
4479 8708 2.431057 TGATCTTCTCCGGGTTAGCTTC 59.569 50.000 0.00 0.00 0.00 3.86
4480 8709 1.933021 TCTTCTCCGGGTTAGCTTCA 58.067 50.000 0.00 0.00 0.00 3.02
4481 8710 2.253610 TCTTCTCCGGGTTAGCTTCAA 58.746 47.619 0.00 0.00 0.00 2.69
4482 8711 2.838202 TCTTCTCCGGGTTAGCTTCAAT 59.162 45.455 0.00 0.00 0.00 2.57
4483 8712 4.028131 TCTTCTCCGGGTTAGCTTCAATA 58.972 43.478 0.00 0.00 0.00 1.90
4484 8713 3.814005 TCTCCGGGTTAGCTTCAATAC 57.186 47.619 0.00 0.00 0.00 1.89
4485 8714 2.433239 TCTCCGGGTTAGCTTCAATACC 59.567 50.000 0.00 0.00 0.00 2.73
4486 8715 2.434702 CTCCGGGTTAGCTTCAATACCT 59.565 50.000 0.00 0.00 0.00 3.08
4487 8716 2.433239 TCCGGGTTAGCTTCAATACCTC 59.567 50.000 0.00 0.00 0.00 3.85
4488 8717 2.434702 CCGGGTTAGCTTCAATACCTCT 59.565 50.000 0.00 0.00 0.00 3.69
4489 8718 3.458189 CGGGTTAGCTTCAATACCTCTG 58.542 50.000 0.00 0.00 0.00 3.35
4490 8719 3.118738 CGGGTTAGCTTCAATACCTCTGT 60.119 47.826 0.00 0.00 0.00 3.41
4491 8720 4.623171 CGGGTTAGCTTCAATACCTCTGTT 60.623 45.833 0.00 0.00 0.00 3.16
4492 8721 5.394883 CGGGTTAGCTTCAATACCTCTGTTA 60.395 44.000 0.00 0.00 0.00 2.41
4493 8722 6.049790 GGGTTAGCTTCAATACCTCTGTTAG 58.950 44.000 0.00 0.00 0.00 2.34
4494 8723 6.127140 GGGTTAGCTTCAATACCTCTGTTAGA 60.127 42.308 0.00 0.00 0.00 2.10
4495 8724 7.328737 GGTTAGCTTCAATACCTCTGTTAGAA 58.671 38.462 0.00 0.00 0.00 2.10
4496 8725 7.822822 GGTTAGCTTCAATACCTCTGTTAGAAA 59.177 37.037 0.00 0.00 0.00 2.52
4497 8726 8.657729 GTTAGCTTCAATACCTCTGTTAGAAAC 58.342 37.037 0.00 0.00 0.00 2.78
4498 8727 6.174049 AGCTTCAATACCTCTGTTAGAAACC 58.826 40.000 0.00 0.00 0.00 3.27
4499 8728 5.938125 GCTTCAATACCTCTGTTAGAAACCA 59.062 40.000 0.00 0.00 0.00 3.67
4500 8729 6.430000 GCTTCAATACCTCTGTTAGAAACCAA 59.570 38.462 0.00 0.00 0.00 3.67
4501 8730 7.361286 GCTTCAATACCTCTGTTAGAAACCAAG 60.361 40.741 0.00 0.00 0.00 3.61
4502 8731 7.311092 TCAATACCTCTGTTAGAAACCAAGA 57.689 36.000 0.00 0.00 0.00 3.02
4503 8732 7.741785 TCAATACCTCTGTTAGAAACCAAGAA 58.258 34.615 0.00 0.00 0.00 2.52
4504 8733 8.215050 TCAATACCTCTGTTAGAAACCAAGAAA 58.785 33.333 0.00 0.00 0.00 2.52
4505 8734 7.981102 ATACCTCTGTTAGAAACCAAGAAAC 57.019 36.000 0.00 0.00 0.00 2.78
4506 8735 5.131067 ACCTCTGTTAGAAACCAAGAAACC 58.869 41.667 0.00 0.00 0.00 3.27
4507 8736 4.519350 CCTCTGTTAGAAACCAAGAAACCC 59.481 45.833 0.00 0.00 0.00 4.11
4508 8737 5.118729 TCTGTTAGAAACCAAGAAACCCA 57.881 39.130 0.00 0.00 0.00 4.51
4509 8738 5.511363 TCTGTTAGAAACCAAGAAACCCAA 58.489 37.500 0.00 0.00 0.00 4.12
4510 8739 5.592688 TCTGTTAGAAACCAAGAAACCCAAG 59.407 40.000 0.00 0.00 0.00 3.61
4511 8740 5.511363 TGTTAGAAACCAAGAAACCCAAGA 58.489 37.500 0.00 0.00 0.00 3.02
4512 8741 5.592688 TGTTAGAAACCAAGAAACCCAAGAG 59.407 40.000 0.00 0.00 0.00 2.85
4513 8742 2.959030 AGAAACCAAGAAACCCAAGAGC 59.041 45.455 0.00 0.00 0.00 4.09
4514 8743 2.755952 AACCAAGAAACCCAAGAGCT 57.244 45.000 0.00 0.00 0.00 4.09
4515 8744 2.755952 ACCAAGAAACCCAAGAGCTT 57.244 45.000 0.00 0.00 0.00 3.74
4516 8745 2.310538 ACCAAGAAACCCAAGAGCTTG 58.689 47.619 3.27 3.27 40.13 4.01
4517 8746 1.000171 CCAAGAAACCCAAGAGCTTGC 60.000 52.381 4.72 0.00 39.16 4.01
4518 8747 1.000171 CAAGAAACCCAAGAGCTTGCC 60.000 52.381 4.72 0.00 39.16 4.52
4519 8748 0.480252 AGAAACCCAAGAGCTTGCCT 59.520 50.000 4.72 0.00 39.16 4.75
4520 8749 0.600057 GAAACCCAAGAGCTTGCCTG 59.400 55.000 4.72 0.00 39.16 4.85
4521 8750 1.466851 AAACCCAAGAGCTTGCCTGC 61.467 55.000 4.72 0.00 39.16 4.85
4522 8751 2.282674 CCCAAGAGCTTGCCTGCA 60.283 61.111 4.72 0.00 39.16 4.41
4523 8752 2.341101 CCCAAGAGCTTGCCTGCAG 61.341 63.158 6.78 6.78 39.16 4.41
4524 8753 2.341101 CCAAGAGCTTGCCTGCAGG 61.341 63.158 29.34 29.34 39.16 4.85
4525 8754 1.303074 CAAGAGCTTGCCTGCAGGA 60.303 57.895 37.21 18.42 37.39 3.86
4526 8755 0.892358 CAAGAGCTTGCCTGCAGGAA 60.892 55.000 37.21 25.79 37.39 3.36
4527 8756 0.892814 AAGAGCTTGCCTGCAGGAAC 60.893 55.000 37.21 19.97 37.39 3.62
4528 8757 1.601759 GAGCTTGCCTGCAGGAACA 60.602 57.895 37.21 22.52 37.39 3.18
4529 8758 1.860484 GAGCTTGCCTGCAGGAACAC 61.860 60.000 37.21 20.20 37.39 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.254462 TGGTATCCGCATTGGCAGAA 59.746 50.000 0.00 0.00 41.24 3.02
5 6 2.024918 CAGTGGTATCCGCATTGGC 58.975 57.895 2.23 0.00 36.32 4.52
7 8 1.064505 CAAGCAGTGGTATCCGCATTG 59.935 52.381 0.00 1.16 36.32 2.82
8 9 1.382522 CAAGCAGTGGTATCCGCATT 58.617 50.000 0.00 0.00 36.32 3.56
9 10 0.464373 CCAAGCAGTGGTATCCGCAT 60.464 55.000 0.00 0.00 43.20 4.73
10 11 1.078497 CCAAGCAGTGGTATCCGCA 60.078 57.895 0.00 0.00 43.20 5.69
11 12 3.813596 CCAAGCAGTGGTATCCGC 58.186 61.111 0.00 0.00 43.20 5.54
14 15 8.747034 ACTCATTGAGTCCAAGCAGTGGTATC 62.747 46.154 13.61 6.55 38.71 2.24
15 16 7.040049 ACTCATTGAGTCCAAGCAGTGGTAT 62.040 44.000 13.61 0.00 38.71 2.73
16 17 5.786059 ACTCATTGAGTCCAAGCAGTGGTA 61.786 45.833 13.61 0.00 38.71 3.25
17 18 5.085107 ACTCATTGAGTCCAAGCAGTGGT 62.085 47.826 13.61 0.00 38.71 4.16
18 19 2.551721 ACTCATTGAGTCCAAGCAGTGG 60.552 50.000 13.61 0.00 38.71 4.00
19 20 2.775890 ACTCATTGAGTCCAAGCAGTG 58.224 47.619 13.61 0.00 38.71 3.66
20 21 3.580458 AGTACTCATTGAGTCCAAGCAGT 59.420 43.478 22.16 4.71 42.40 4.40
21 22 4.199432 AGTACTCATTGAGTCCAAGCAG 57.801 45.455 22.16 0.00 42.40 4.24
22 23 4.569943 GAAGTACTCATTGAGTCCAAGCA 58.430 43.478 22.16 1.59 42.40 3.91
23 24 3.614616 CGAAGTACTCATTGAGTCCAAGC 59.385 47.826 22.16 9.00 42.40 4.01
24 25 3.614616 GCGAAGTACTCATTGAGTCCAAG 59.385 47.826 22.16 12.25 42.40 3.61
25 26 3.258372 AGCGAAGTACTCATTGAGTCCAA 59.742 43.478 22.16 3.10 42.40 3.53
26 27 2.826128 AGCGAAGTACTCATTGAGTCCA 59.174 45.455 22.16 3.86 42.40 4.02
27 28 3.119459 TCAGCGAAGTACTCATTGAGTCC 60.119 47.826 22.16 11.83 42.40 3.85
28 29 3.854809 GTCAGCGAAGTACTCATTGAGTC 59.145 47.826 22.16 13.74 42.40 3.36
29 30 3.255888 TGTCAGCGAAGTACTCATTGAGT 59.744 43.478 22.16 22.16 45.54 3.41
30 31 3.838120 TGTCAGCGAAGTACTCATTGAG 58.162 45.455 12.17 12.17 35.52 3.02
31 32 3.934457 TGTCAGCGAAGTACTCATTGA 57.066 42.857 0.00 0.00 0.00 2.57
32 33 6.834959 ATTATGTCAGCGAAGTACTCATTG 57.165 37.500 0.00 0.00 0.00 2.82
33 34 8.818057 GTTTATTATGTCAGCGAAGTACTCATT 58.182 33.333 0.00 0.00 0.00 2.57
34 35 7.438459 GGTTTATTATGTCAGCGAAGTACTCAT 59.562 37.037 0.00 0.00 0.00 2.90
35 36 6.755141 GGTTTATTATGTCAGCGAAGTACTCA 59.245 38.462 0.00 0.00 0.00 3.41
36 37 6.074994 CGGTTTATTATGTCAGCGAAGTACTC 60.075 42.308 0.00 0.00 31.89 2.59
37 38 5.747197 CGGTTTATTATGTCAGCGAAGTACT 59.253 40.000 0.00 0.00 31.89 2.73
38 39 5.051240 CCGGTTTATTATGTCAGCGAAGTAC 60.051 44.000 0.00 0.00 31.89 2.73
39 40 5.045215 CCGGTTTATTATGTCAGCGAAGTA 58.955 41.667 0.00 0.00 31.89 2.24
40 41 3.869246 CCGGTTTATTATGTCAGCGAAGT 59.131 43.478 0.00 0.00 31.89 3.01
41 42 3.303132 GCCGGTTTATTATGTCAGCGAAG 60.303 47.826 1.90 0.00 31.89 3.79
42 43 2.610374 GCCGGTTTATTATGTCAGCGAA 59.390 45.455 1.90 0.00 31.89 4.70
43 44 2.206750 GCCGGTTTATTATGTCAGCGA 58.793 47.619 1.90 0.00 31.89 4.93
44 45 1.263217 GGCCGGTTTATTATGTCAGCG 59.737 52.381 1.90 0.00 0.00 5.18
45 46 1.263217 CGGCCGGTTTATTATGTCAGC 59.737 52.381 20.10 0.00 0.00 4.26
46 47 1.263217 GCGGCCGGTTTATTATGTCAG 59.737 52.381 29.38 0.00 0.00 3.51
47 48 1.134340 AGCGGCCGGTTTATTATGTCA 60.134 47.619 26.97 0.00 0.00 3.58
48 49 1.263217 CAGCGGCCGGTTTATTATGTC 59.737 52.381 30.29 4.78 0.00 3.06
49 50 1.134340 TCAGCGGCCGGTTTATTATGT 60.134 47.619 30.29 0.00 0.00 2.29
50 51 1.588674 TCAGCGGCCGGTTTATTATG 58.411 50.000 30.29 15.01 0.00 1.90
51 52 1.944709 GTTCAGCGGCCGGTTTATTAT 59.055 47.619 30.29 0.00 0.00 1.28
52 53 1.371595 GTTCAGCGGCCGGTTTATTA 58.628 50.000 30.29 8.10 0.00 0.98
53 54 1.310216 GGTTCAGCGGCCGGTTTATT 61.310 55.000 30.29 0.00 0.00 1.40
54 55 1.747745 GGTTCAGCGGCCGGTTTAT 60.748 57.895 30.29 0.00 0.00 1.40
55 56 2.358984 GGTTCAGCGGCCGGTTTA 60.359 61.111 30.29 16.65 0.00 2.01
63 64 2.892425 GAGCATCCGGTTCAGCGG 60.892 66.667 11.28 11.28 0.00 5.52
74 75 4.195416 CAAGGAAGAAGGTAAGGAGCATC 58.805 47.826 0.00 0.00 0.00 3.91
75 76 3.623453 GCAAGGAAGAAGGTAAGGAGCAT 60.623 47.826 0.00 0.00 0.00 3.79
76 77 2.290323 GCAAGGAAGAAGGTAAGGAGCA 60.290 50.000 0.00 0.00 0.00 4.26
77 78 2.360844 GCAAGGAAGAAGGTAAGGAGC 58.639 52.381 0.00 0.00 0.00 4.70
78 79 2.622436 CGCAAGGAAGAAGGTAAGGAG 58.378 52.381 0.00 0.00 0.00 3.69
79 80 1.338769 GCGCAAGGAAGAAGGTAAGGA 60.339 52.381 0.30 0.00 38.28 3.36
80 81 1.087501 GCGCAAGGAAGAAGGTAAGG 58.912 55.000 0.30 0.00 38.28 2.69
81 82 2.003301 GAGCGCAAGGAAGAAGGTAAG 58.997 52.381 11.47 0.00 38.28 2.34
82 83 1.338769 GGAGCGCAAGGAAGAAGGTAA 60.339 52.381 11.47 0.00 38.28 2.85
83 84 0.249398 GGAGCGCAAGGAAGAAGGTA 59.751 55.000 11.47 0.00 38.28 3.08
84 85 1.003233 GGAGCGCAAGGAAGAAGGT 60.003 57.895 11.47 0.00 38.28 3.50
85 86 1.003355 TGGAGCGCAAGGAAGAAGG 60.003 57.895 11.47 0.00 38.28 3.46
86 87 1.301677 GGTGGAGCGCAAGGAAGAAG 61.302 60.000 11.47 0.00 38.28 2.85
87 88 1.302511 GGTGGAGCGCAAGGAAGAA 60.303 57.895 11.47 0.00 38.28 2.52
88 89 2.347490 GGTGGAGCGCAAGGAAGA 59.653 61.111 11.47 0.00 38.28 2.87
89 90 2.032528 TGGTGGAGCGCAAGGAAG 59.967 61.111 11.47 0.00 38.28 3.46
90 91 2.281484 GTGGTGGAGCGCAAGGAA 60.281 61.111 11.47 0.00 38.28 3.36
91 92 4.329545 GGTGGTGGAGCGCAAGGA 62.330 66.667 11.47 0.00 38.28 3.36
92 93 4.641645 TGGTGGTGGAGCGCAAGG 62.642 66.667 11.47 0.00 38.28 3.61
93 94 3.357079 GTGGTGGTGGAGCGCAAG 61.357 66.667 11.47 0.00 43.44 4.01
102 103 4.562425 AGTGTGGCCGTGGTGGTG 62.562 66.667 0.00 0.00 41.21 4.17
103 104 4.562425 CAGTGTGGCCGTGGTGGT 62.562 66.667 0.00 0.00 41.21 4.16
104 105 4.248842 TCAGTGTGGCCGTGGTGG 62.249 66.667 0.00 0.00 42.50 4.61
105 106 2.972505 GTCAGTGTGGCCGTGGTG 60.973 66.667 0.00 0.00 0.00 4.17
106 107 4.602259 CGTCAGTGTGGCCGTGGT 62.602 66.667 0.00 0.00 0.00 4.16
113 114 2.734723 CGTGAGCCGTCAGTGTGG 60.735 66.667 0.00 0.00 31.53 4.17
122 123 2.730672 GCTGCTAACACGTGAGCCG 61.731 63.158 25.01 18.30 44.03 5.52
123 124 2.391389 GGCTGCTAACACGTGAGCC 61.391 63.158 24.24 24.24 42.37 4.70
124 125 1.667830 TGGCTGCTAACACGTGAGC 60.668 57.895 25.01 21.71 39.25 4.26
125 126 0.599991 TGTGGCTGCTAACACGTGAG 60.600 55.000 25.01 11.51 40.39 3.51
126 127 0.034756 ATGTGGCTGCTAACACGTGA 59.965 50.000 25.01 0.00 40.39 4.35
127 128 1.393539 GTATGTGGCTGCTAACACGTG 59.606 52.381 15.48 15.48 40.39 4.49
128 129 1.001520 TGTATGTGGCTGCTAACACGT 59.998 47.619 10.14 8.65 40.39 4.49
129 130 1.393539 GTGTATGTGGCTGCTAACACG 59.606 52.381 10.14 0.00 40.39 4.49
130 131 2.699954 AGTGTATGTGGCTGCTAACAC 58.300 47.619 10.36 10.36 37.96 3.32
131 132 3.513912 AGTAGTGTATGTGGCTGCTAACA 59.486 43.478 10.30 10.30 0.00 2.41
132 133 4.124851 AGTAGTGTATGTGGCTGCTAAC 57.875 45.455 0.00 0.00 0.00 2.34
133 134 5.198207 TCTAGTAGTGTATGTGGCTGCTAA 58.802 41.667 0.00 0.00 29.65 3.09
134 135 4.788679 TCTAGTAGTGTATGTGGCTGCTA 58.211 43.478 0.00 0.00 0.00 3.49
135 136 3.632333 TCTAGTAGTGTATGTGGCTGCT 58.368 45.455 0.00 0.00 0.00 4.24
136 137 4.386867 TTCTAGTAGTGTATGTGGCTGC 57.613 45.455 0.00 0.00 0.00 5.25
137 138 6.313905 CCTTTTTCTAGTAGTGTATGTGGCTG 59.686 42.308 0.00 0.00 0.00 4.85
138 139 6.407202 CCTTTTTCTAGTAGTGTATGTGGCT 58.593 40.000 0.00 0.00 0.00 4.75
139 140 5.585047 CCCTTTTTCTAGTAGTGTATGTGGC 59.415 44.000 0.00 0.00 0.00 5.01
140 141 5.585047 GCCCTTTTTCTAGTAGTGTATGTGG 59.415 44.000 0.00 0.00 0.00 4.17
141 142 6.407202 AGCCCTTTTTCTAGTAGTGTATGTG 58.593 40.000 0.00 0.00 0.00 3.21
142 143 6.622427 AGCCCTTTTTCTAGTAGTGTATGT 57.378 37.500 0.00 0.00 0.00 2.29
143 144 9.915629 CTATAGCCCTTTTTCTAGTAGTGTATG 57.084 37.037 0.00 0.00 0.00 2.39
144 145 9.878737 TCTATAGCCCTTTTTCTAGTAGTGTAT 57.121 33.333 0.00 0.00 0.00 2.29
201 202 3.760151 AGTATATACTAATGGCGCACCGA 59.240 43.478 13.88 0.00 34.69 4.69
258 259 2.097396 CGATGCGCCATTAGTAGTTTCG 60.097 50.000 4.18 0.00 0.00 3.46
1223 4860 3.290710 ACATATTGCTTCGGCCAAATCT 58.709 40.909 2.24 0.00 40.91 2.40
1241 4878 1.416401 AGACCACCAACTGTTCGACAT 59.584 47.619 0.00 0.00 0.00 3.06
1261 4898 2.663520 CCACGGCAAGCACGTACA 60.664 61.111 7.94 0.00 43.58 2.90
1274 4911 2.878406 CCCAATTCTATAACCTGCCACG 59.122 50.000 0.00 0.00 0.00 4.94
1378 5015 1.882912 TGCTAAGTTGACACTGCAGG 58.117 50.000 19.93 9.66 30.44 4.85
1605 5242 5.774690 AGAACAAATGAAGTTTCATGGCCTA 59.225 36.000 3.32 0.00 46.60 3.93
1645 5282 0.981183 TAACAAGCTGGTCCACCGAT 59.019 50.000 0.00 0.00 39.43 4.18
1730 5370 3.632145 AGTGTACAAGCTGGGACAAAAAG 59.368 43.478 8.06 0.00 38.70 2.27
1964 5607 5.990120 AGCATTTATGAGCTTTTCAACCT 57.010 34.783 0.00 0.00 39.77 3.50
1965 5608 8.707938 AATTAGCATTTATGAGCTTTTCAACC 57.292 30.769 0.00 0.00 42.05 3.77
1966 5609 9.357652 TGAATTAGCATTTATGAGCTTTTCAAC 57.642 29.630 0.00 0.00 42.05 3.18
2433 6528 5.833082 AGACGCGATGAAGATAGTAAACAT 58.167 37.500 15.93 0.00 0.00 2.71
2564 6659 7.918076 TGATAAAGGGTGAGAAACTATGAACT 58.082 34.615 0.00 0.00 0.00 3.01
2591 6686 1.808411 TTTGCCAACCGTCTCAGATC 58.192 50.000 0.00 0.00 0.00 2.75
2771 6866 6.784031 AGATTTGTGAGTCCCTTAACATTCT 58.216 36.000 0.00 0.00 0.00 2.40
3043 7142 4.470334 AGGCAGTCTCTCTGAAAAGATC 57.530 45.455 0.00 0.00 46.27 2.75
3418 7517 1.812571 TCGCTTTCTTCAGGAAATGCC 59.187 47.619 0.00 0.00 42.25 4.40
3552 7651 7.962995 AAACTACCATCACATAGAAGAGAGA 57.037 36.000 0.00 0.00 0.00 3.10
3593 7692 4.904154 GCGAGTTTGTCTTCACATTACAAC 59.096 41.667 0.00 0.00 33.10 3.32
3909 8043 3.408634 ACTAATGGCGCACTGTTTAGTT 58.591 40.909 10.83 0.00 34.07 2.24
4208 8437 4.261801 GACAAGGAGCCTTTATTGCTGTA 58.738 43.478 0.00 0.00 39.69 2.74
4209 8438 3.084786 GACAAGGAGCCTTTATTGCTGT 58.915 45.455 0.00 0.00 39.69 4.40
4210 8439 3.084039 TGACAAGGAGCCTTTATTGCTG 58.916 45.455 0.00 0.00 39.69 4.41
4211 8440 3.439857 TGACAAGGAGCCTTTATTGCT 57.560 42.857 0.00 0.00 43.03 3.91
4212 8441 3.367395 GGTTGACAAGGAGCCTTTATTGC 60.367 47.826 0.00 0.00 33.42 3.56
4213 8442 3.119849 CGGTTGACAAGGAGCCTTTATTG 60.120 47.826 0.00 0.00 33.42 1.90
4214 8443 3.081804 CGGTTGACAAGGAGCCTTTATT 58.918 45.455 0.00 0.00 33.42 1.40
4215 8444 2.304761 TCGGTTGACAAGGAGCCTTTAT 59.695 45.455 0.00 0.00 33.42 1.40
4216 8445 1.695242 TCGGTTGACAAGGAGCCTTTA 59.305 47.619 0.00 0.00 33.42 1.85
4217 8446 0.472471 TCGGTTGACAAGGAGCCTTT 59.528 50.000 0.00 0.00 33.42 3.11
4218 8447 0.472471 TTCGGTTGACAAGGAGCCTT 59.528 50.000 0.00 0.00 36.60 4.35
4219 8448 0.035458 CTTCGGTTGACAAGGAGCCT 59.965 55.000 0.00 0.00 0.00 4.58
4220 8449 1.578206 GCTTCGGTTGACAAGGAGCC 61.578 60.000 0.00 0.00 0.00 4.70
4221 8450 0.884704 TGCTTCGGTTGACAAGGAGC 60.885 55.000 1.56 1.56 0.00 4.70
4222 8451 1.151668 CTGCTTCGGTTGACAAGGAG 58.848 55.000 0.00 0.00 32.55 3.69
4223 8452 0.884704 GCTGCTTCGGTTGACAAGGA 60.885 55.000 0.00 0.00 0.00 3.36
4224 8453 1.165907 TGCTGCTTCGGTTGACAAGG 61.166 55.000 0.00 0.00 0.00 3.61
4225 8454 0.662619 TTGCTGCTTCGGTTGACAAG 59.337 50.000 0.00 0.00 0.00 3.16
4226 8455 0.662619 CTTGCTGCTTCGGTTGACAA 59.337 50.000 0.00 0.00 0.00 3.18
4227 8456 1.165907 CCTTGCTGCTTCGGTTGACA 61.166 55.000 0.00 0.00 0.00 3.58
4228 8457 0.884704 TCCTTGCTGCTTCGGTTGAC 60.885 55.000 0.00 0.00 0.00 3.18
4229 8458 0.884704 GTCCTTGCTGCTTCGGTTGA 60.885 55.000 0.00 0.00 0.00 3.18
4230 8459 0.886490 AGTCCTTGCTGCTTCGGTTG 60.886 55.000 0.00 0.00 0.00 3.77
4231 8460 0.886490 CAGTCCTTGCTGCTTCGGTT 60.886 55.000 0.00 0.00 0.00 4.44
4232 8461 1.302033 CAGTCCTTGCTGCTTCGGT 60.302 57.895 0.00 0.00 0.00 4.69
4233 8462 2.037136 CCAGTCCTTGCTGCTTCGG 61.037 63.158 0.00 0.00 35.28 4.30
4234 8463 2.037136 CCCAGTCCTTGCTGCTTCG 61.037 63.158 0.00 0.00 35.28 3.79
4235 8464 1.676967 CCCCAGTCCTTGCTGCTTC 60.677 63.158 0.00 0.00 35.28 3.86
4236 8465 2.437897 CCCCAGTCCTTGCTGCTT 59.562 61.111 0.00 0.00 35.28 3.91
4237 8466 3.655211 CCCCCAGTCCTTGCTGCT 61.655 66.667 0.00 0.00 35.28 4.24
4239 8468 3.635268 GAGCCCCCAGTCCTTGCTG 62.635 68.421 0.00 0.00 36.31 4.41
4240 8469 3.334054 GAGCCCCCAGTCCTTGCT 61.334 66.667 0.00 0.00 34.40 3.91
4241 8470 4.785453 CGAGCCCCCAGTCCTTGC 62.785 72.222 0.00 0.00 0.00 4.01
4242 8471 4.101448 CCGAGCCCCCAGTCCTTG 62.101 72.222 0.00 0.00 0.00 3.61
4259 8488 1.673923 GGATTTGAAAAGGCAGCTGGC 60.674 52.381 31.58 31.58 43.74 4.85
4260 8489 1.897802 AGGATTTGAAAAGGCAGCTGG 59.102 47.619 17.12 0.00 0.00 4.85
4261 8490 2.559668 TGAGGATTTGAAAAGGCAGCTG 59.440 45.455 10.11 10.11 0.00 4.24
4262 8491 2.880443 TGAGGATTTGAAAAGGCAGCT 58.120 42.857 0.00 0.00 0.00 4.24
4263 8492 3.665745 TTGAGGATTTGAAAAGGCAGC 57.334 42.857 0.00 0.00 0.00 5.25
4264 8493 4.450080 GCTTTTGAGGATTTGAAAAGGCAG 59.550 41.667 0.00 0.00 37.23 4.85
4265 8494 4.141756 TGCTTTTGAGGATTTGAAAAGGCA 60.142 37.500 0.00 0.40 40.78 4.75
4266 8495 4.379652 TGCTTTTGAGGATTTGAAAAGGC 58.620 39.130 0.00 0.00 37.23 4.35
4267 8496 5.604565 ACTGCTTTTGAGGATTTGAAAAGG 58.395 37.500 0.00 0.00 37.23 3.11
4268 8497 8.822652 AATACTGCTTTTGAGGATTTGAAAAG 57.177 30.769 0.00 0.00 38.94 2.27
4269 8498 9.912634 CTAATACTGCTTTTGAGGATTTGAAAA 57.087 29.630 0.00 0.00 0.00 2.29
4270 8499 8.028938 GCTAATACTGCTTTTGAGGATTTGAAA 58.971 33.333 0.00 0.00 0.00 2.69
4271 8500 7.394359 AGCTAATACTGCTTTTGAGGATTTGAA 59.606 33.333 0.00 0.00 37.52 2.69
4272 8501 6.886459 AGCTAATACTGCTTTTGAGGATTTGA 59.114 34.615 0.00 0.00 37.52 2.69
4273 8502 6.971184 CAGCTAATACTGCTTTTGAGGATTTG 59.029 38.462 0.00 0.00 38.92 2.32
4274 8503 7.093322 CAGCTAATACTGCTTTTGAGGATTT 57.907 36.000 0.00 0.00 38.92 2.17
4275 8504 6.690194 CAGCTAATACTGCTTTTGAGGATT 57.310 37.500 0.00 0.00 38.92 3.01
4287 8516 5.178996 GTCTGGAATGATGCAGCTAATACTG 59.821 44.000 2.53 0.00 44.06 2.74
4288 8517 5.163269 TGTCTGGAATGATGCAGCTAATACT 60.163 40.000 2.53 0.00 44.06 2.12
4289 8518 5.059161 TGTCTGGAATGATGCAGCTAATAC 58.941 41.667 2.53 0.00 44.06 1.89
4290 8519 5.294734 TGTCTGGAATGATGCAGCTAATA 57.705 39.130 2.53 0.00 44.06 0.98
4291 8520 4.160642 TGTCTGGAATGATGCAGCTAAT 57.839 40.909 2.53 0.00 44.06 1.73
4292 8521 3.632643 TGTCTGGAATGATGCAGCTAA 57.367 42.857 2.53 0.00 44.06 3.09
4293 8522 3.632643 TTGTCTGGAATGATGCAGCTA 57.367 42.857 2.53 0.00 44.06 3.32
4294 8523 2.502142 TTGTCTGGAATGATGCAGCT 57.498 45.000 2.53 0.00 44.06 4.24
4295 8524 2.490903 ACTTTGTCTGGAATGATGCAGC 59.509 45.455 0.00 0.00 44.06 5.25
4296 8525 3.754850 TGACTTTGTCTGGAATGATGCAG 59.245 43.478 0.00 0.00 45.62 4.41
4297 8526 3.753815 TGACTTTGTCTGGAATGATGCA 58.246 40.909 0.00 0.00 33.15 3.96
4298 8527 4.397103 TGATGACTTTGTCTGGAATGATGC 59.603 41.667 0.00 0.00 33.15 3.91
4299 8528 5.646793 ACTGATGACTTTGTCTGGAATGATG 59.353 40.000 0.00 0.00 33.15 3.07
4300 8529 5.813383 ACTGATGACTTTGTCTGGAATGAT 58.187 37.500 0.00 0.00 33.15 2.45
4301 8530 5.233083 ACTGATGACTTTGTCTGGAATGA 57.767 39.130 0.00 0.00 33.15 2.57
4302 8531 5.954296 AACTGATGACTTTGTCTGGAATG 57.046 39.130 0.00 0.00 33.15 2.67
4303 8532 6.774656 AGAAAACTGATGACTTTGTCTGGAAT 59.225 34.615 0.00 0.00 33.15 3.01
4304 8533 6.122277 AGAAAACTGATGACTTTGTCTGGAA 58.878 36.000 0.00 0.00 33.15 3.53
4305 8534 5.684704 AGAAAACTGATGACTTTGTCTGGA 58.315 37.500 0.00 0.00 33.15 3.86
4306 8535 6.038603 TGAAGAAAACTGATGACTTTGTCTGG 59.961 38.462 0.00 0.00 33.15 3.86
4307 8536 7.019774 TGAAGAAAACTGATGACTTTGTCTG 57.980 36.000 0.00 0.00 33.15 3.51
4308 8537 7.500227 TGATGAAGAAAACTGATGACTTTGTCT 59.500 33.333 0.00 0.00 33.15 3.41
4309 8538 7.642669 TGATGAAGAAAACTGATGACTTTGTC 58.357 34.615 0.00 0.00 0.00 3.18
4310 8539 7.572523 TGATGAAGAAAACTGATGACTTTGT 57.427 32.000 0.00 0.00 0.00 2.83
4311 8540 8.133627 AGTTGATGAAGAAAACTGATGACTTTG 58.866 33.333 0.00 0.00 33.01 2.77
4312 8541 8.230472 AGTTGATGAAGAAAACTGATGACTTT 57.770 30.769 0.00 0.00 33.01 2.66
4313 8542 7.814264 AGTTGATGAAGAAAACTGATGACTT 57.186 32.000 0.00 0.00 33.01 3.01
4320 8549 6.618287 TGTACCAGTTGATGAAGAAAACTG 57.382 37.500 7.61 7.61 46.66 3.16
4321 8550 7.255590 CCATTGTACCAGTTGATGAAGAAAACT 60.256 37.037 0.00 0.00 34.52 2.66
4322 8551 6.863126 CCATTGTACCAGTTGATGAAGAAAAC 59.137 38.462 0.00 0.00 0.00 2.43
4323 8552 6.516527 GCCATTGTACCAGTTGATGAAGAAAA 60.517 38.462 0.00 0.00 0.00 2.29
4324 8553 5.048083 GCCATTGTACCAGTTGATGAAGAAA 60.048 40.000 0.00 0.00 0.00 2.52
4325 8554 4.458989 GCCATTGTACCAGTTGATGAAGAA 59.541 41.667 0.00 0.00 0.00 2.52
4326 8555 4.009675 GCCATTGTACCAGTTGATGAAGA 58.990 43.478 0.00 0.00 0.00 2.87
4327 8556 3.758023 TGCCATTGTACCAGTTGATGAAG 59.242 43.478 0.00 0.00 0.00 3.02
4328 8557 3.760738 TGCCATTGTACCAGTTGATGAA 58.239 40.909 0.00 0.00 0.00 2.57
4329 8558 3.431673 TGCCATTGTACCAGTTGATGA 57.568 42.857 0.00 0.00 0.00 2.92
4330 8559 3.181484 CCATGCCATTGTACCAGTTGATG 60.181 47.826 0.00 0.00 0.00 3.07
4331 8560 3.025978 CCATGCCATTGTACCAGTTGAT 58.974 45.455 0.00 0.00 0.00 2.57
4332 8561 2.445427 CCATGCCATTGTACCAGTTGA 58.555 47.619 0.00 0.00 0.00 3.18
4333 8562 1.135024 GCCATGCCATTGTACCAGTTG 60.135 52.381 0.00 0.00 0.00 3.16
4334 8563 1.185315 GCCATGCCATTGTACCAGTT 58.815 50.000 0.00 0.00 0.00 3.16
4335 8564 2.886382 GCCATGCCATTGTACCAGT 58.114 52.632 0.00 0.00 0.00 4.00
4347 8576 0.899717 TTTGGGTGAGAAGGCCATGC 60.900 55.000 5.01 0.00 0.00 4.06
4348 8577 0.890683 GTTTGGGTGAGAAGGCCATG 59.109 55.000 5.01 0.00 0.00 3.66
4349 8578 0.609131 CGTTTGGGTGAGAAGGCCAT 60.609 55.000 5.01 0.00 0.00 4.40
4350 8579 1.228124 CGTTTGGGTGAGAAGGCCA 60.228 57.895 5.01 0.00 0.00 5.36
4351 8580 1.971695 CCGTTTGGGTGAGAAGGCC 60.972 63.158 0.00 0.00 0.00 5.19
4352 8581 2.626780 GCCGTTTGGGTGAGAAGGC 61.627 63.158 0.00 0.00 38.44 4.35
4353 8582 1.073199 AGCCGTTTGGGTGAGAAGG 59.927 57.895 0.00 0.00 46.48 3.46
4354 8583 4.800554 AGCCGTTTGGGTGAGAAG 57.199 55.556 0.00 0.00 46.48 2.85
4361 8590 2.732912 GCCGTTTTATAAGCCGTTTGGG 60.733 50.000 5.49 0.00 39.58 4.12
4362 8591 2.162809 AGCCGTTTTATAAGCCGTTTGG 59.837 45.455 5.49 0.00 38.77 3.28
4363 8592 3.481112 AGCCGTTTTATAAGCCGTTTG 57.519 42.857 5.49 0.00 0.00 2.93
4364 8593 5.625921 TTAAGCCGTTTTATAAGCCGTTT 57.374 34.783 5.49 3.28 0.00 3.60
4365 8594 5.625921 TTTAAGCCGTTTTATAAGCCGTT 57.374 34.783 5.49 0.00 0.00 4.44
4366 8595 4.437794 GCTTTAAGCCGTTTTATAAGCCGT 60.438 41.667 5.52 0.00 34.48 5.68
4367 8596 4.033019 GCTTTAAGCCGTTTTATAAGCCG 58.967 43.478 5.52 0.34 34.48 5.52
4368 8597 4.989044 TGCTTTAAGCCGTTTTATAAGCC 58.011 39.130 14.80 0.00 41.51 4.35
4369 8598 4.499399 GCTGCTTTAAGCCGTTTTATAAGC 59.501 41.667 14.80 9.18 41.51 3.09
4370 8599 5.636837 TGCTGCTTTAAGCCGTTTTATAAG 58.363 37.500 14.80 2.84 41.51 1.73
4371 8600 5.630661 TGCTGCTTTAAGCCGTTTTATAA 57.369 34.783 14.80 0.00 41.51 0.98
4372 8601 5.630661 TTGCTGCTTTAAGCCGTTTTATA 57.369 34.783 14.80 0.00 41.51 0.98
4373 8602 4.513198 TTGCTGCTTTAAGCCGTTTTAT 57.487 36.364 14.80 0.00 41.51 1.40
4374 8603 3.992260 TTGCTGCTTTAAGCCGTTTTA 57.008 38.095 14.80 0.00 41.51 1.52
4375 8604 2.880963 TTGCTGCTTTAAGCCGTTTT 57.119 40.000 14.80 0.00 41.51 2.43
4376 8605 3.669557 CGTATTGCTGCTTTAAGCCGTTT 60.670 43.478 14.80 0.59 41.51 3.60
4377 8606 2.159572 CGTATTGCTGCTTTAAGCCGTT 60.160 45.455 14.80 0.92 41.51 4.44
4378 8607 1.396996 CGTATTGCTGCTTTAAGCCGT 59.603 47.619 14.80 0.00 41.51 5.68
4379 8608 1.663643 TCGTATTGCTGCTTTAAGCCG 59.336 47.619 14.80 9.30 41.51 5.52
4380 8609 2.223272 GGTCGTATTGCTGCTTTAAGCC 60.223 50.000 14.80 0.21 41.51 4.35
4381 8610 2.223272 GGGTCGTATTGCTGCTTTAAGC 60.223 50.000 10.38 10.38 43.82 3.09
4382 8611 2.030457 CGGGTCGTATTGCTGCTTTAAG 59.970 50.000 0.00 0.00 0.00 1.85
4383 8612 2.004017 CGGGTCGTATTGCTGCTTTAA 58.996 47.619 0.00 0.00 0.00 1.52
4384 8613 1.647346 CGGGTCGTATTGCTGCTTTA 58.353 50.000 0.00 0.00 0.00 1.85
4385 8614 1.644786 GCGGGTCGTATTGCTGCTTT 61.645 55.000 0.00 0.00 0.00 3.51
4386 8615 2.106683 GCGGGTCGTATTGCTGCTT 61.107 57.895 0.00 0.00 0.00 3.91
4387 8616 2.511600 GCGGGTCGTATTGCTGCT 60.512 61.111 0.00 0.00 0.00 4.24
4388 8617 3.573491 GGCGGGTCGTATTGCTGC 61.573 66.667 0.00 0.00 0.00 5.25
4389 8618 1.705337 CTTGGCGGGTCGTATTGCTG 61.705 60.000 0.00 0.00 0.00 4.41
4390 8619 1.449601 CTTGGCGGGTCGTATTGCT 60.450 57.895 0.00 0.00 0.00 3.91
4391 8620 3.098555 CTTGGCGGGTCGTATTGC 58.901 61.111 0.00 0.00 0.00 3.56
4392 8621 3.098555 GCTTGGCGGGTCGTATTG 58.901 61.111 0.00 0.00 0.00 1.90
4405 8634 1.279527 TAAACGACGTCCAGCGCTTG 61.280 55.000 7.50 3.96 46.11 4.01
4406 8635 0.389426 ATAAACGACGTCCAGCGCTT 60.389 50.000 7.50 0.00 46.11 4.68
4407 8636 1.076533 CATAAACGACGTCCAGCGCT 61.077 55.000 2.64 2.64 46.11 5.92
4408 8637 1.343821 CATAAACGACGTCCAGCGC 59.656 57.895 10.58 0.00 46.11 5.92
4410 8639 0.094730 GTGCATAAACGACGTCCAGC 59.905 55.000 10.58 4.35 0.00 4.85
4411 8640 0.365523 CGTGCATAAACGACGTCCAG 59.634 55.000 10.58 0.00 46.49 3.86
4412 8641 1.619526 GCGTGCATAAACGACGTCCA 61.620 55.000 10.58 0.00 46.49 4.02
4413 8642 1.058284 GCGTGCATAAACGACGTCC 59.942 57.895 10.58 0.00 46.49 4.79
4414 8643 1.058284 GGCGTGCATAAACGACGTC 59.942 57.895 5.18 5.18 46.49 4.34
4415 8644 3.161817 GGCGTGCATAAACGACGT 58.838 55.556 0.00 0.00 46.49 4.34
4418 8647 3.492545 GCCGGCGTGCATAAACGA 61.493 61.111 12.58 0.00 46.49 3.85
4419 8648 1.697772 TAAGCCGGCGTGCATAAACG 61.698 55.000 25.89 0.00 46.30 3.60
4420 8649 0.027586 CTAAGCCGGCGTGCATAAAC 59.972 55.000 25.89 0.00 0.00 2.01
4421 8650 1.711060 GCTAAGCCGGCGTGCATAAA 61.711 55.000 25.89 2.21 0.00 1.40
4422 8651 2.177580 GCTAAGCCGGCGTGCATAA 61.178 57.895 25.89 3.03 0.00 1.90
4423 8652 2.587753 GCTAAGCCGGCGTGCATA 60.588 61.111 25.89 11.39 0.00 3.14
4434 8663 2.559440 CAATCACCTCTCTGGCTAAGC 58.441 52.381 0.00 0.00 40.22 3.09
4435 8664 2.559440 GCAATCACCTCTCTGGCTAAG 58.441 52.381 0.00 0.00 40.22 2.18
4436 8665 1.210478 GGCAATCACCTCTCTGGCTAA 59.790 52.381 0.00 0.00 40.22 3.09
4437 8666 0.833287 GGCAATCACCTCTCTGGCTA 59.167 55.000 0.00 0.00 40.22 3.93
4438 8667 0.913451 AGGCAATCACCTCTCTGGCT 60.913 55.000 0.00 0.00 39.63 4.75
4439 8668 0.034670 AAGGCAATCACCTCTCTGGC 60.035 55.000 0.00 0.00 39.93 4.85
4440 8669 1.280133 TCAAGGCAATCACCTCTCTGG 59.720 52.381 0.00 0.00 39.93 3.86
4441 8670 2.775911 TCAAGGCAATCACCTCTCTG 57.224 50.000 0.00 0.00 39.93 3.35
4442 8671 3.113824 AGATCAAGGCAATCACCTCTCT 58.886 45.455 0.00 0.00 39.93 3.10
4443 8672 3.557228 AGATCAAGGCAATCACCTCTC 57.443 47.619 0.00 0.00 39.93 3.20
4444 8673 3.522750 AGAAGATCAAGGCAATCACCTCT 59.477 43.478 0.00 0.00 39.93 3.69
4445 8674 3.876320 GAGAAGATCAAGGCAATCACCTC 59.124 47.826 0.00 0.00 39.93 3.85
4446 8675 3.371380 GGAGAAGATCAAGGCAATCACCT 60.371 47.826 0.00 0.00 43.91 4.00
4447 8676 2.948315 GGAGAAGATCAAGGCAATCACC 59.052 50.000 0.00 0.00 0.00 4.02
4448 8677 2.611292 CGGAGAAGATCAAGGCAATCAC 59.389 50.000 0.00 0.00 0.00 3.06
4449 8678 2.420547 CCGGAGAAGATCAAGGCAATCA 60.421 50.000 0.00 0.00 0.00 2.57
4450 8679 2.216898 CCGGAGAAGATCAAGGCAATC 58.783 52.381 0.00 0.00 0.00 2.67
4451 8680 1.133976 CCCGGAGAAGATCAAGGCAAT 60.134 52.381 0.73 0.00 0.00 3.56
4452 8681 0.253044 CCCGGAGAAGATCAAGGCAA 59.747 55.000 0.73 0.00 0.00 4.52
4453 8682 0.909610 ACCCGGAGAAGATCAAGGCA 60.910 55.000 0.73 0.00 0.00 4.75
4454 8683 0.253327 AACCCGGAGAAGATCAAGGC 59.747 55.000 0.73 0.00 0.00 4.35
4455 8684 2.483889 GCTAACCCGGAGAAGATCAAGG 60.484 54.545 0.73 0.00 0.00 3.61
4456 8685 2.432510 AGCTAACCCGGAGAAGATCAAG 59.567 50.000 0.73 0.00 0.00 3.02
4457 8686 2.467880 AGCTAACCCGGAGAAGATCAA 58.532 47.619 0.73 0.00 0.00 2.57
4458 8687 2.160721 AGCTAACCCGGAGAAGATCA 57.839 50.000 0.73 0.00 0.00 2.92
4459 8688 2.431057 TGAAGCTAACCCGGAGAAGATC 59.569 50.000 0.73 0.03 0.00 2.75
4460 8689 2.467880 TGAAGCTAACCCGGAGAAGAT 58.532 47.619 0.73 0.00 0.00 2.40
4461 8690 1.933021 TGAAGCTAACCCGGAGAAGA 58.067 50.000 0.73 0.00 0.00 2.87
4462 8691 2.762535 TTGAAGCTAACCCGGAGAAG 57.237 50.000 0.73 0.00 0.00 2.85
4463 8692 3.118519 GGTATTGAAGCTAACCCGGAGAA 60.119 47.826 0.73 0.00 0.00 2.87
4464 8693 2.433239 GGTATTGAAGCTAACCCGGAGA 59.567 50.000 0.73 0.00 0.00 3.71
4465 8694 2.434702 AGGTATTGAAGCTAACCCGGAG 59.565 50.000 0.73 0.00 32.98 4.63
4466 8695 2.433239 GAGGTATTGAAGCTAACCCGGA 59.567 50.000 0.73 0.00 35.60 5.14
4467 8696 2.434702 AGAGGTATTGAAGCTAACCCGG 59.565 50.000 0.00 0.00 35.60 5.73
4468 8697 3.118738 ACAGAGGTATTGAAGCTAACCCG 60.119 47.826 0.00 0.00 35.60 5.28
4469 8698 4.489306 ACAGAGGTATTGAAGCTAACCC 57.511 45.455 0.00 0.00 35.60 4.11
4470 8699 6.875076 TCTAACAGAGGTATTGAAGCTAACC 58.125 40.000 0.00 0.00 35.60 2.85
4471 8700 8.657729 GTTTCTAACAGAGGTATTGAAGCTAAC 58.342 37.037 0.00 0.00 35.60 2.34
4472 8701 7.822822 GGTTTCTAACAGAGGTATTGAAGCTAA 59.177 37.037 0.00 0.00 35.60 3.09
4473 8702 7.038587 TGGTTTCTAACAGAGGTATTGAAGCTA 60.039 37.037 0.00 0.00 35.60 3.32
4474 8703 6.174049 GGTTTCTAACAGAGGTATTGAAGCT 58.826 40.000 0.00 0.00 39.11 3.74
4475 8704 5.938125 TGGTTTCTAACAGAGGTATTGAAGC 59.062 40.000 0.00 0.00 0.00 3.86
4476 8705 7.878127 TCTTGGTTTCTAACAGAGGTATTGAAG 59.122 37.037 0.00 0.00 0.00 3.02
4477 8706 7.741785 TCTTGGTTTCTAACAGAGGTATTGAA 58.258 34.615 0.00 0.00 0.00 2.69
4478 8707 7.311092 TCTTGGTTTCTAACAGAGGTATTGA 57.689 36.000 0.00 0.00 0.00 2.57
4479 8708 7.979444 TTCTTGGTTTCTAACAGAGGTATTG 57.021 36.000 0.00 0.00 0.00 1.90
4480 8709 7.447545 GGTTTCTTGGTTTCTAACAGAGGTATT 59.552 37.037 0.00 0.00 0.00 1.89
4481 8710 6.940867 GGTTTCTTGGTTTCTAACAGAGGTAT 59.059 38.462 0.00 0.00 0.00 2.73
4482 8711 6.293698 GGTTTCTTGGTTTCTAACAGAGGTA 58.706 40.000 0.00 0.00 0.00 3.08
4483 8712 5.131067 GGTTTCTTGGTTTCTAACAGAGGT 58.869 41.667 0.00 0.00 0.00 3.85
4484 8713 4.519350 GGGTTTCTTGGTTTCTAACAGAGG 59.481 45.833 0.00 0.00 0.00 3.69
4485 8714 5.130350 TGGGTTTCTTGGTTTCTAACAGAG 58.870 41.667 0.00 0.00 0.00 3.35
4486 8715 5.118729 TGGGTTTCTTGGTTTCTAACAGA 57.881 39.130 0.00 0.00 0.00 3.41
4487 8716 5.592688 TCTTGGGTTTCTTGGTTTCTAACAG 59.407 40.000 0.00 0.00 0.00 3.16
4488 8717 5.511363 TCTTGGGTTTCTTGGTTTCTAACA 58.489 37.500 0.00 0.00 0.00 2.41
4489 8718 5.507482 GCTCTTGGGTTTCTTGGTTTCTAAC 60.507 44.000 0.00 0.00 0.00 2.34
4490 8719 4.583073 GCTCTTGGGTTTCTTGGTTTCTAA 59.417 41.667 0.00 0.00 0.00 2.10
4491 8720 4.141251 AGCTCTTGGGTTTCTTGGTTTCTA 60.141 41.667 0.00 0.00 0.00 2.10
4492 8721 2.959030 GCTCTTGGGTTTCTTGGTTTCT 59.041 45.455 0.00 0.00 0.00 2.52
4493 8722 2.959030 AGCTCTTGGGTTTCTTGGTTTC 59.041 45.455 0.00 0.00 0.00 2.78
4494 8723 3.032265 AGCTCTTGGGTTTCTTGGTTT 57.968 42.857 0.00 0.00 0.00 3.27
4495 8724 2.695147 CAAGCTCTTGGGTTTCTTGGTT 59.305 45.455 1.79 0.00 36.95 3.67
4496 8725 2.310538 CAAGCTCTTGGGTTTCTTGGT 58.689 47.619 1.79 0.00 36.95 3.67
4497 8726 1.000171 GCAAGCTCTTGGGTTTCTTGG 60.000 52.381 11.15 0.00 40.74 3.61
4498 8727 1.000171 GGCAAGCTCTTGGGTTTCTTG 60.000 52.381 11.15 0.00 40.74 3.02
4499 8728 1.133356 AGGCAAGCTCTTGGGTTTCTT 60.133 47.619 11.15 0.00 40.74 2.52
4500 8729 0.480252 AGGCAAGCTCTTGGGTTTCT 59.520 50.000 11.15 0.00 40.74 2.52
4501 8730 0.600057 CAGGCAAGCTCTTGGGTTTC 59.400 55.000 11.15 0.00 40.74 2.78
4502 8731 1.466851 GCAGGCAAGCTCTTGGGTTT 61.467 55.000 11.15 0.00 40.74 3.27
4503 8732 1.905354 GCAGGCAAGCTCTTGGGTT 60.905 57.895 11.15 0.00 40.74 4.11
4504 8733 2.282745 GCAGGCAAGCTCTTGGGT 60.283 61.111 11.15 0.00 40.74 4.51
4505 8734 2.282674 TGCAGGCAAGCTCTTGGG 60.283 61.111 11.15 0.00 40.74 4.12
4506 8735 2.341101 CCTGCAGGCAAGCTCTTGG 61.341 63.158 22.33 0.00 40.74 3.61
4507 8736 0.892358 TTCCTGCAGGCAAGCTCTTG 60.892 55.000 28.91 5.31 43.14 3.02
4508 8737 0.892814 GTTCCTGCAGGCAAGCTCTT 60.893 55.000 28.91 0.00 34.99 2.85
4509 8738 1.303155 GTTCCTGCAGGCAAGCTCT 60.303 57.895 28.91 0.00 34.99 4.09
4510 8739 1.601759 TGTTCCTGCAGGCAAGCTC 60.602 57.895 28.91 13.51 34.99 4.09
4511 8740 1.900498 GTGTTCCTGCAGGCAAGCT 60.900 57.895 28.91 0.00 34.99 3.74
4512 8741 2.647297 GTGTTCCTGCAGGCAAGC 59.353 61.111 28.91 14.46 34.44 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.