Multiple sequence alignment - TraesCS2D01G149500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G149500 chr2D 100.000 4478 0 0 1 4478 90825345 90820868 0.000000e+00 8270.0
1 TraesCS2D01G149500 chr2D 92.683 41 3 0 4236 4276 302250090 302250130 4.840000e-05 60.2
2 TraesCS2D01G149500 chr2B 95.009 3326 118 18 939 4232 143937756 143934447 0.000000e+00 5179.0
3 TraesCS2D01G149500 chr2B 89.014 801 41 22 257 1034 143938527 143937751 0.000000e+00 948.0
4 TraesCS2D01G149500 chr2B 85.941 505 46 4 3734 4215 143818163 143817661 2.390000e-142 516.0
5 TraesCS2D01G149500 chr2B 88.785 214 16 5 12 218 729060285 729060497 5.750000e-64 255.0
6 TraesCS2D01G149500 chr2B 87.037 216 16 6 4214 4427 143910358 143910153 2.690000e-57 233.0
7 TraesCS2D01G149500 chr2B 77.358 159 22 12 67 217 140504736 140504888 1.030000e-11 82.4
8 TraesCS2D01G149500 chr2A 85.791 556 54 6 3750 4281 90560891 90560337 2.340000e-157 566.0
9 TraesCS2D01G149500 chr3A 90.090 222 12 6 12 225 586579400 586579181 3.410000e-71 279.0
10 TraesCS2D01G149500 chr3A 84.038 213 26 7 12 218 599992718 599992508 9.830000e-47 198.0
11 TraesCS2D01G149500 chr3A 88.125 160 14 5 65 220 696478607 696478449 7.650000e-43 185.0
12 TraesCS2D01G149500 chr7A 84.733 262 32 7 500 757 407296187 407296444 5.750000e-64 255.0
13 TraesCS2D01G149500 chr7A 87.383 214 20 7 12 219 608512887 608513099 5.790000e-59 239.0
14 TraesCS2D01G149500 chr6D 88.235 204 18 4 12 210 287388251 287388453 5.790000e-59 239.0
15 TraesCS2D01G149500 chr6D 92.683 41 3 0 4236 4276 308899383 308899343 4.840000e-05 60.2
16 TraesCS2D01G149500 chr7D 83.209 268 31 9 500 757 368009554 368009817 2.690000e-57 233.0
17 TraesCS2D01G149500 chr4B 83.019 212 30 5 12 218 582556258 582556048 2.130000e-43 187.0
18 TraesCS2D01G149500 chr4B 92.683 41 3 0 4236 4276 366930147 366930187 4.840000e-05 60.2
19 TraesCS2D01G149500 chrUn 82.258 124 12 8 110 224 325782632 325782754 1.030000e-16 99.0
20 TraesCS2D01G149500 chr5A 95.238 42 2 0 4236 4277 485580117 485580076 2.890000e-07 67.6
21 TraesCS2D01G149500 chr5A 93.023 43 3 0 4235 4277 165328889 165328931 3.740000e-06 63.9
22 TraesCS2D01G149500 chr5B 93.023 43 3 0 4235 4277 172625187 172625229 3.740000e-06 63.9
23 TraesCS2D01G149500 chr3D 92.857 42 3 0 4235 4276 441388821 441388780 1.340000e-05 62.1
24 TraesCS2D01G149500 chr1D 92.683 41 3 0 4236 4276 95869003 95869043 4.840000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G149500 chr2D 90820868 90825345 4477 True 8270.0 8270 100.0000 1 4478 1 chr2D.!!$R1 4477
1 TraesCS2D01G149500 chr2B 143934447 143938527 4080 True 3063.5 5179 92.0115 257 4232 2 chr2B.!!$R3 3975
2 TraesCS2D01G149500 chr2B 143817661 143818163 502 True 516.0 516 85.9410 3734 4215 1 chr2B.!!$R1 481
3 TraesCS2D01G149500 chr2A 90560337 90560891 554 True 566.0 566 85.7910 3750 4281 1 chr2A.!!$R1 531

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
101 102 0.038166 GTGGATGGCTGTCCTTTGGA 59.962 55.0 10.17 0.0 39.12 3.53 F
156 157 0.038526 CGCGGAGTGGTAGTTGTCTT 60.039 55.0 0.00 0.0 0.00 3.01 F
387 388 0.100325 CGTGTCAGCCTTTGTTTGCA 59.900 50.0 0.00 0.0 0.00 4.08 F
389 390 0.102844 TGTCAGCCTTTGTTTGCAGC 59.897 50.0 0.00 0.0 0.00 5.25 F
1248 1352 0.179134 CGAACGGAGGAACTAGCAGG 60.179 60.0 0.00 0.0 41.55 4.85 F
1463 1567 0.760567 CCTGAGGGTGGATCGGATGA 60.761 60.0 0.00 0.0 0.00 2.92 F
2466 2573 0.036732 AGTGCGATTCCCTGCTCAAA 59.963 50.0 0.00 0.0 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1536 1643 0.325296 TCCGGAATGGCTGGTAGTCT 60.325 55.0 0.00 0.0 44.00 3.24 R
1761 1868 0.585357 CGCTCATTATCACTGGCAGC 59.415 55.0 15.89 0.0 0.00 5.25 R
1767 1874 0.595053 CGCGTCCGCTCATTATCACT 60.595 55.0 10.21 0.0 39.32 3.41 R
2097 2204 1.026718 GGAGGTTGGTGATCTTGCCG 61.027 60.0 0.00 0.0 0.00 5.69 R
2439 2546 0.036388 GGGAATCGCACTTGTCCTGA 60.036 55.0 0.00 0.0 0.00 3.86 R
3396 3503 1.155042 CACTCTTCAGCTGTGCCTTC 58.845 55.0 14.67 0.0 0.00 3.46 R
4360 4504 0.105453 ATGGGGTATCAGAGAGCGGT 60.105 55.0 0.00 0.0 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.979204 GACACCGACAATGACCGA 57.021 55.556 0.00 0.00 0.00 4.69
18 19 2.442084 GACACCGACAATGACCGAC 58.558 57.895 0.00 0.00 0.00 4.79
19 20 0.319211 GACACCGACAATGACCGACA 60.319 55.000 0.00 0.00 0.00 4.35
20 21 0.320374 ACACCGACAATGACCGACAT 59.680 50.000 0.00 0.00 41.45 3.06
21 22 0.999406 CACCGACAATGACCGACATC 59.001 55.000 0.00 0.00 38.38 3.06
22 23 0.457853 ACCGACAATGACCGACATCG 60.458 55.000 0.00 0.00 38.38 3.84
23 24 0.179148 CCGACAATGACCGACATCGA 60.179 55.000 2.09 0.00 43.02 3.59
24 25 1.536072 CCGACAATGACCGACATCGAT 60.536 52.381 2.09 0.00 43.02 3.59
25 26 1.781429 CGACAATGACCGACATCGATC 59.219 52.381 2.09 0.00 43.02 3.69
26 27 1.781429 GACAATGACCGACATCGATCG 59.219 52.381 9.36 9.36 43.02 3.69
27 28 1.404035 ACAATGACCGACATCGATCGA 59.596 47.619 21.86 21.86 45.13 3.59
28 29 2.047040 CAATGACCGACATCGATCGAG 58.953 52.381 23.84 16.79 45.13 4.04
29 30 1.594331 ATGACCGACATCGATCGAGA 58.406 50.000 23.84 0.68 45.13 4.04
30 31 0.656259 TGACCGACATCGATCGAGAC 59.344 55.000 23.84 14.93 45.13 3.36
31 32 0.383246 GACCGACATCGATCGAGACG 60.383 60.000 23.84 23.94 45.13 4.18
32 33 1.722852 CCGACATCGATCGAGACGC 60.723 63.158 23.84 11.31 45.13 5.19
33 34 2.064258 CGACATCGATCGAGACGCG 61.064 63.158 23.84 18.52 45.13 6.01
34 35 1.722852 GACATCGATCGAGACGCGG 60.723 63.158 23.84 10.39 41.33 6.46
35 36 3.094058 CATCGATCGAGACGCGGC 61.094 66.667 23.84 7.86 41.33 6.53
36 37 3.583086 ATCGATCGAGACGCGGCA 61.583 61.111 23.84 0.00 41.33 5.69
37 38 3.120979 ATCGATCGAGACGCGGCAA 62.121 57.895 23.84 0.00 41.33 4.52
38 39 2.990674 ATCGATCGAGACGCGGCAAG 62.991 60.000 23.84 7.73 41.33 4.01
39 40 2.956964 GATCGAGACGCGGCAAGG 60.957 66.667 17.71 1.74 41.33 3.61
40 41 3.701604 GATCGAGACGCGGCAAGGT 62.702 63.158 17.71 2.41 41.33 3.50
41 42 3.296709 ATCGAGACGCGGCAAGGTT 62.297 57.895 17.71 0.00 41.33 3.50
42 43 2.781595 ATCGAGACGCGGCAAGGTTT 62.782 55.000 17.71 0.00 41.33 3.27
43 44 2.604174 CGAGACGCGGCAAGGTTTT 61.604 57.895 17.71 0.00 36.03 2.43
44 45 1.652563 GAGACGCGGCAAGGTTTTT 59.347 52.632 17.71 0.00 0.00 1.94
45 46 0.660300 GAGACGCGGCAAGGTTTTTG 60.660 55.000 17.71 0.00 0.00 2.44
46 47 1.660264 GACGCGGCAAGGTTTTTGG 60.660 57.895 7.34 0.00 0.00 3.28
47 48 2.344521 GACGCGGCAAGGTTTTTGGT 62.345 55.000 7.34 0.00 0.00 3.67
48 49 1.227118 CGCGGCAAGGTTTTTGGTT 60.227 52.632 0.00 0.00 0.00 3.67
49 50 0.808060 CGCGGCAAGGTTTTTGGTTT 60.808 50.000 0.00 0.00 0.00 3.27
50 51 1.374560 GCGGCAAGGTTTTTGGTTTT 58.625 45.000 0.00 0.00 0.00 2.43
51 52 1.740585 GCGGCAAGGTTTTTGGTTTTT 59.259 42.857 0.00 0.00 0.00 1.94
52 53 2.477021 GCGGCAAGGTTTTTGGTTTTTG 60.477 45.455 0.00 0.00 0.00 2.44
53 54 2.096657 CGGCAAGGTTTTTGGTTTTTGG 59.903 45.455 0.00 0.00 0.00 3.28
54 55 2.425312 GGCAAGGTTTTTGGTTTTTGGG 59.575 45.455 0.00 0.00 0.00 4.12
55 56 3.085533 GCAAGGTTTTTGGTTTTTGGGT 58.914 40.909 0.00 0.00 0.00 4.51
56 57 3.508012 GCAAGGTTTTTGGTTTTTGGGTT 59.492 39.130 0.00 0.00 0.00 4.11
57 58 4.617067 GCAAGGTTTTTGGTTTTTGGGTTG 60.617 41.667 0.00 0.00 0.00 3.77
58 59 3.691575 AGGTTTTTGGTTTTTGGGTTGG 58.308 40.909 0.00 0.00 0.00 3.77
59 60 2.164624 GGTTTTTGGTTTTTGGGTTGGC 59.835 45.455 0.00 0.00 0.00 4.52
60 61 3.085533 GTTTTTGGTTTTTGGGTTGGCT 58.914 40.909 0.00 0.00 0.00 4.75
61 62 2.700722 TTTGGTTTTTGGGTTGGCTC 57.299 45.000 0.00 0.00 0.00 4.70
62 63 1.872773 TTGGTTTTTGGGTTGGCTCT 58.127 45.000 0.00 0.00 0.00 4.09
63 64 1.872773 TGGTTTTTGGGTTGGCTCTT 58.127 45.000 0.00 0.00 0.00 2.85
64 65 2.192263 TGGTTTTTGGGTTGGCTCTTT 58.808 42.857 0.00 0.00 0.00 2.52
65 66 2.573915 TGGTTTTTGGGTTGGCTCTTTT 59.426 40.909 0.00 0.00 0.00 2.27
66 67 2.942376 GGTTTTTGGGTTGGCTCTTTTG 59.058 45.455 0.00 0.00 0.00 2.44
67 68 3.605634 GTTTTTGGGTTGGCTCTTTTGT 58.394 40.909 0.00 0.00 0.00 2.83
68 69 2.977772 TTTGGGTTGGCTCTTTTGTG 57.022 45.000 0.00 0.00 0.00 3.33
69 70 1.859302 TTGGGTTGGCTCTTTTGTGT 58.141 45.000 0.00 0.00 0.00 3.72
70 71 1.859302 TGGGTTGGCTCTTTTGTGTT 58.141 45.000 0.00 0.00 0.00 3.32
71 72 1.480137 TGGGTTGGCTCTTTTGTGTTG 59.520 47.619 0.00 0.00 0.00 3.33
72 73 1.480545 GGGTTGGCTCTTTTGTGTTGT 59.519 47.619 0.00 0.00 0.00 3.32
73 74 2.093711 GGGTTGGCTCTTTTGTGTTGTT 60.094 45.455 0.00 0.00 0.00 2.83
74 75 2.929398 GGTTGGCTCTTTTGTGTTGTTG 59.071 45.455 0.00 0.00 0.00 3.33
75 76 3.584834 GTTGGCTCTTTTGTGTTGTTGT 58.415 40.909 0.00 0.00 0.00 3.32
76 77 4.381079 GGTTGGCTCTTTTGTGTTGTTGTA 60.381 41.667 0.00 0.00 0.00 2.41
77 78 5.348164 GTTGGCTCTTTTGTGTTGTTGTAT 58.652 37.500 0.00 0.00 0.00 2.29
78 79 5.590530 TGGCTCTTTTGTGTTGTTGTATT 57.409 34.783 0.00 0.00 0.00 1.89
79 80 5.347342 TGGCTCTTTTGTGTTGTTGTATTG 58.653 37.500 0.00 0.00 0.00 1.90
80 81 5.105554 TGGCTCTTTTGTGTTGTTGTATTGT 60.106 36.000 0.00 0.00 0.00 2.71
81 82 5.458779 GGCTCTTTTGTGTTGTTGTATTGTC 59.541 40.000 0.00 0.00 0.00 3.18
82 83 5.171337 GCTCTTTTGTGTTGTTGTATTGTCG 59.829 40.000 0.00 0.00 0.00 4.35
83 84 6.184580 TCTTTTGTGTTGTTGTATTGTCGT 57.815 33.333 0.00 0.00 0.00 4.34
84 85 6.024664 TCTTTTGTGTTGTTGTATTGTCGTG 58.975 36.000 0.00 0.00 0.00 4.35
85 86 3.953874 TGTGTTGTTGTATTGTCGTGG 57.046 42.857 0.00 0.00 0.00 4.94
86 87 3.532542 TGTGTTGTTGTATTGTCGTGGA 58.467 40.909 0.00 0.00 0.00 4.02
87 88 4.130857 TGTGTTGTTGTATTGTCGTGGAT 58.869 39.130 0.00 0.00 0.00 3.41
88 89 4.024472 TGTGTTGTTGTATTGTCGTGGATG 60.024 41.667 0.00 0.00 0.00 3.51
89 90 3.500299 TGTTGTTGTATTGTCGTGGATGG 59.500 43.478 0.00 0.00 0.00 3.51
90 91 2.080693 TGTTGTATTGTCGTGGATGGC 58.919 47.619 0.00 0.00 0.00 4.40
91 92 2.290008 TGTTGTATTGTCGTGGATGGCT 60.290 45.455 0.00 0.00 0.00 4.75
92 93 2.022764 TGTATTGTCGTGGATGGCTG 57.977 50.000 0.00 0.00 0.00 4.85
93 94 1.277842 TGTATTGTCGTGGATGGCTGT 59.722 47.619 0.00 0.00 0.00 4.40
94 95 1.933853 GTATTGTCGTGGATGGCTGTC 59.066 52.381 0.00 0.00 0.00 3.51
95 96 0.392998 ATTGTCGTGGATGGCTGTCC 60.393 55.000 3.00 3.00 38.81 4.02
96 97 1.480212 TTGTCGTGGATGGCTGTCCT 61.480 55.000 10.17 0.00 39.12 3.85
97 98 1.296715 GTCGTGGATGGCTGTCCTT 59.703 57.895 10.17 0.00 39.12 3.36
98 99 0.321653 GTCGTGGATGGCTGTCCTTT 60.322 55.000 10.17 0.00 39.12 3.11
99 100 0.321564 TCGTGGATGGCTGTCCTTTG 60.322 55.000 10.17 2.04 39.12 2.77
100 101 1.308069 CGTGGATGGCTGTCCTTTGG 61.308 60.000 10.17 0.00 39.12 3.28
101 102 0.038166 GTGGATGGCTGTCCTTTGGA 59.962 55.000 10.17 0.00 39.12 3.53
110 111 3.721868 TCCTTTGGACTAGCCGGG 58.278 61.111 2.18 0.00 40.66 5.73
111 112 1.229400 TCCTTTGGACTAGCCGGGT 60.229 57.895 12.58 12.58 40.66 5.28
112 113 1.078426 CCTTTGGACTAGCCGGGTG 60.078 63.158 18.40 9.01 40.66 4.61
113 114 1.677552 CTTTGGACTAGCCGGGTGT 59.322 57.895 18.40 12.49 40.66 4.16
114 115 0.673644 CTTTGGACTAGCCGGGTGTG 60.674 60.000 18.40 11.68 40.66 3.82
115 116 2.119484 TTTGGACTAGCCGGGTGTGG 62.119 60.000 18.40 8.94 40.66 4.17
116 117 2.682494 GGACTAGCCGGGTGTGGA 60.682 66.667 18.40 0.00 0.00 4.02
117 118 2.722201 GGACTAGCCGGGTGTGGAG 61.722 68.421 18.40 8.15 0.00 3.86
118 119 1.982938 GACTAGCCGGGTGTGGAGT 60.983 63.158 18.40 11.91 0.00 3.85
119 120 1.535687 ACTAGCCGGGTGTGGAGTT 60.536 57.895 18.40 0.00 0.00 3.01
120 121 1.079127 CTAGCCGGGTGTGGAGTTG 60.079 63.158 18.40 0.00 0.00 3.16
121 122 1.827399 CTAGCCGGGTGTGGAGTTGT 61.827 60.000 18.40 0.00 0.00 3.32
122 123 2.107041 TAGCCGGGTGTGGAGTTGTG 62.107 60.000 18.40 0.00 0.00 3.33
123 124 2.978010 CCGGGTGTGGAGTTGTGC 60.978 66.667 0.00 0.00 0.00 4.57
124 125 2.111043 CGGGTGTGGAGTTGTGCT 59.889 61.111 0.00 0.00 0.00 4.40
125 126 1.369692 CGGGTGTGGAGTTGTGCTA 59.630 57.895 0.00 0.00 0.00 3.49
126 127 0.949105 CGGGTGTGGAGTTGTGCTAC 60.949 60.000 0.00 0.00 0.00 3.58
127 128 0.107831 GGGTGTGGAGTTGTGCTACA 59.892 55.000 0.00 0.00 35.19 2.74
131 132 3.886044 TGGAGTTGTGCTACACTCG 57.114 52.632 0.00 0.00 31.86 4.18
132 133 1.037493 TGGAGTTGTGCTACACTCGT 58.963 50.000 0.00 0.00 31.86 4.18
133 134 1.411246 TGGAGTTGTGCTACACTCGTT 59.589 47.619 0.00 0.00 31.86 3.85
134 135 1.792949 GGAGTTGTGCTACACTCGTTG 59.207 52.381 0.00 0.00 35.11 4.10
135 136 2.470821 GAGTTGTGCTACACTCGTTGT 58.529 47.619 0.00 0.00 42.84 3.32
136 137 2.864343 GAGTTGTGCTACACTCGTTGTT 59.136 45.455 0.00 0.00 39.91 2.83
137 138 2.864343 AGTTGTGCTACACTCGTTGTTC 59.136 45.455 0.00 0.00 39.91 3.18
138 139 1.483316 TGTGCTACACTCGTTGTTCG 58.517 50.000 0.00 0.00 39.91 3.95
139 140 0.161024 GTGCTACACTCGTTGTTCGC 59.839 55.000 0.00 3.31 39.91 4.70
140 141 1.272784 TGCTACACTCGTTGTTCGCG 61.273 55.000 0.00 0.00 39.91 5.87
141 142 1.941476 GCTACACTCGTTGTTCGCGG 61.941 60.000 6.13 0.00 39.91 6.46
142 143 0.386352 CTACACTCGTTGTTCGCGGA 60.386 55.000 6.13 0.00 39.91 5.54
143 144 0.386352 TACACTCGTTGTTCGCGGAG 60.386 55.000 6.13 6.24 39.91 4.63
144 145 1.660575 CACTCGTTGTTCGCGGAGT 60.661 57.895 6.13 6.98 39.67 3.85
145 146 1.660575 ACTCGTTGTTCGCGGAGTG 60.661 57.895 6.13 0.00 39.67 3.51
146 147 2.355363 TCGTTGTTCGCGGAGTGG 60.355 61.111 6.13 0.00 39.32 4.00
147 148 2.660552 CGTTGTTCGCGGAGTGGT 60.661 61.111 6.13 0.00 39.32 4.16
148 149 1.372004 CGTTGTTCGCGGAGTGGTA 60.372 57.895 6.13 0.00 39.32 3.25
149 150 1.342082 CGTTGTTCGCGGAGTGGTAG 61.342 60.000 6.13 0.00 39.32 3.18
150 151 0.319297 GTTGTTCGCGGAGTGGTAGT 60.319 55.000 6.13 0.00 39.32 2.73
151 152 0.390124 TTGTTCGCGGAGTGGTAGTT 59.610 50.000 6.13 0.00 39.32 2.24
152 153 0.319211 TGTTCGCGGAGTGGTAGTTG 60.319 55.000 6.13 0.00 39.32 3.16
153 154 0.319297 GTTCGCGGAGTGGTAGTTGT 60.319 55.000 6.13 0.00 39.32 3.32
154 155 0.038892 TTCGCGGAGTGGTAGTTGTC 60.039 55.000 6.13 0.00 39.32 3.18
155 156 0.892358 TCGCGGAGTGGTAGTTGTCT 60.892 55.000 6.13 0.00 39.32 3.41
156 157 0.038526 CGCGGAGTGGTAGTTGTCTT 60.039 55.000 0.00 0.00 0.00 3.01
157 158 1.429463 GCGGAGTGGTAGTTGTCTTG 58.571 55.000 0.00 0.00 0.00 3.02
158 159 1.270147 GCGGAGTGGTAGTTGTCTTGT 60.270 52.381 0.00 0.00 0.00 3.16
159 160 2.029649 GCGGAGTGGTAGTTGTCTTGTA 60.030 50.000 0.00 0.00 0.00 2.41
160 161 3.572584 CGGAGTGGTAGTTGTCTTGTAC 58.427 50.000 0.00 0.00 0.00 2.90
161 162 3.255149 CGGAGTGGTAGTTGTCTTGTACT 59.745 47.826 0.00 0.00 0.00 2.73
162 163 4.261909 CGGAGTGGTAGTTGTCTTGTACTT 60.262 45.833 0.00 0.00 0.00 2.24
163 164 5.048504 CGGAGTGGTAGTTGTCTTGTACTTA 60.049 44.000 0.00 0.00 0.00 2.24
164 165 6.155136 GGAGTGGTAGTTGTCTTGTACTTAC 58.845 44.000 0.00 0.00 0.00 2.34
165 166 6.239120 GGAGTGGTAGTTGTCTTGTACTTACA 60.239 42.308 0.00 0.00 0.00 2.41
166 167 7.116075 AGTGGTAGTTGTCTTGTACTTACAA 57.884 36.000 1.97 1.97 43.32 2.41
167 168 7.732996 AGTGGTAGTTGTCTTGTACTTACAAT 58.267 34.615 2.33 4.72 44.34 2.71
168 169 8.208903 AGTGGTAGTTGTCTTGTACTTACAATT 58.791 33.333 2.33 9.02 44.34 2.32
169 170 8.493547 GTGGTAGTTGTCTTGTACTTACAATTC 58.506 37.037 2.33 0.89 44.34 2.17
170 171 8.426489 TGGTAGTTGTCTTGTACTTACAATTCT 58.574 33.333 2.33 7.33 44.34 2.40
171 172 8.923683 GGTAGTTGTCTTGTACTTACAATTCTC 58.076 37.037 2.33 5.36 44.34 2.87
172 173 9.694137 GTAGTTGTCTTGTACTTACAATTCTCT 57.306 33.333 2.33 6.59 44.34 3.10
195 196 9.291664 CTCTTATTCTATAAAGCTATGGTACGC 57.708 37.037 0.00 0.00 0.00 4.42
196 197 8.799367 TCTTATTCTATAAAGCTATGGTACGCA 58.201 33.333 0.00 0.00 0.00 5.24
197 198 9.419297 CTTATTCTATAAAGCTATGGTACGCAA 57.581 33.333 0.00 0.00 0.00 4.85
198 199 9.938280 TTATTCTATAAAGCTATGGTACGCAAT 57.062 29.630 0.00 0.00 0.00 3.56
199 200 8.848474 ATTCTATAAAGCTATGGTACGCAATT 57.152 30.769 0.00 0.00 0.00 2.32
200 201 8.671384 TTCTATAAAGCTATGGTACGCAATTT 57.329 30.769 0.00 0.00 0.00 1.82
201 202 9.767228 TTCTATAAAGCTATGGTACGCAATTTA 57.233 29.630 0.00 0.00 0.00 1.40
202 203 9.199982 TCTATAAAGCTATGGTACGCAATTTAC 57.800 33.333 0.00 0.00 0.00 2.01
203 204 4.789095 AAGCTATGGTACGCAATTTACG 57.211 40.909 0.00 0.00 0.00 3.18
205 206 4.935702 AGCTATGGTACGCAATTTACGTA 58.064 39.130 6.43 6.43 44.55 3.57
236 237 6.699575 AAAAATAGTTCTCCCCGATGAATG 57.300 37.500 0.00 0.00 0.00 2.67
237 238 5.373812 AAATAGTTCTCCCCGATGAATGT 57.626 39.130 0.00 0.00 0.00 2.71
238 239 2.990066 AGTTCTCCCCGATGAATGTC 57.010 50.000 0.00 0.00 0.00 3.06
239 240 2.187958 AGTTCTCCCCGATGAATGTCA 58.812 47.619 0.00 0.00 0.00 3.58
240 241 2.169352 AGTTCTCCCCGATGAATGTCAG 59.831 50.000 0.00 0.00 0.00 3.51
241 242 2.159179 TCTCCCCGATGAATGTCAGA 57.841 50.000 0.00 0.00 0.00 3.27
242 243 2.682594 TCTCCCCGATGAATGTCAGAT 58.317 47.619 0.00 0.00 0.00 2.90
243 244 3.844640 TCTCCCCGATGAATGTCAGATA 58.155 45.455 0.00 0.00 0.00 1.98
244 245 4.223144 TCTCCCCGATGAATGTCAGATAA 58.777 43.478 0.00 0.00 0.00 1.75
245 246 4.653801 TCTCCCCGATGAATGTCAGATAAA 59.346 41.667 0.00 0.00 0.00 1.40
246 247 5.307976 TCTCCCCGATGAATGTCAGATAAAT 59.692 40.000 0.00 0.00 0.00 1.40
247 248 5.308014 TCCCCGATGAATGTCAGATAAATG 58.692 41.667 0.00 0.00 0.00 2.32
248 249 5.065914 CCCCGATGAATGTCAGATAAATGT 58.934 41.667 0.00 0.00 0.00 2.71
249 250 5.049198 CCCCGATGAATGTCAGATAAATGTG 60.049 44.000 0.00 0.00 0.00 3.21
250 251 5.528690 CCCGATGAATGTCAGATAAATGTGT 59.471 40.000 0.00 0.00 0.00 3.72
251 252 6.293081 CCCGATGAATGTCAGATAAATGTGTC 60.293 42.308 0.00 0.00 0.00 3.67
252 253 6.293081 CCGATGAATGTCAGATAAATGTGTCC 60.293 42.308 0.00 0.00 0.00 4.02
253 254 6.481313 CGATGAATGTCAGATAAATGTGTCCT 59.519 38.462 0.00 0.00 0.00 3.85
254 255 7.653311 CGATGAATGTCAGATAAATGTGTCCTA 59.347 37.037 0.00 0.00 0.00 2.94
255 256 9.499479 GATGAATGTCAGATAAATGTGTCCTAT 57.501 33.333 0.00 0.00 0.00 2.57
309 310 4.365287 GCATGAATTCGTGTGCGG 57.635 55.556 24.84 3.88 38.89 5.69
314 315 2.435938 AATTCGTGTGCGGCCGAT 60.436 55.556 33.48 8.68 38.89 4.18
319 320 2.890474 GTGTGCGGCCGATTCGAT 60.890 61.111 33.48 0.00 0.00 3.59
322 323 2.279451 TGCGGCCGATTCGATCTG 60.279 61.111 33.48 5.30 0.00 2.90
324 325 2.728180 CGGCCGATTCGATCTGGA 59.272 61.111 24.07 0.00 0.00 3.86
326 327 1.010935 CGGCCGATTCGATCTGGATG 61.011 60.000 24.07 0.00 0.00 3.51
330 331 2.130395 CCGATTCGATCTGGATGTGTG 58.870 52.381 7.83 0.00 0.00 3.82
332 333 3.243401 CCGATTCGATCTGGATGTGTGTA 60.243 47.826 7.83 0.00 0.00 2.90
352 353 2.022129 GGGTCACGCTTCTGTCACG 61.022 63.158 0.00 0.00 0.00 4.35
363 364 2.900716 TCTGTCACGTGAACAATCCA 57.099 45.000 21.95 11.87 0.00 3.41
385 386 1.021202 TCCGTGTCAGCCTTTGTTTG 58.979 50.000 0.00 0.00 0.00 2.93
386 387 0.594796 CCGTGTCAGCCTTTGTTTGC 60.595 55.000 0.00 0.00 0.00 3.68
387 388 0.100325 CGTGTCAGCCTTTGTTTGCA 59.900 50.000 0.00 0.00 0.00 4.08
388 389 1.843992 GTGTCAGCCTTTGTTTGCAG 58.156 50.000 0.00 0.00 0.00 4.41
389 390 0.102844 TGTCAGCCTTTGTTTGCAGC 59.897 50.000 0.00 0.00 0.00 5.25
390 391 0.386838 GTCAGCCTTTGTTTGCAGCT 59.613 50.000 0.00 0.00 0.00 4.24
441 443 1.802365 GGCACCGCCTTATAATTACGG 59.198 52.381 15.51 15.51 46.69 4.02
452 454 8.173130 CGCCTTATAATTACGGCCTAATAAAAG 58.827 37.037 0.00 8.39 39.08 2.27
555 557 2.042843 AGGCTCTACCACCGGGAG 60.043 66.667 6.32 2.93 43.14 4.30
562 564 3.533079 TACCACCGGGAGCAGGACA 62.533 63.158 6.32 0.00 38.05 4.02
563 565 3.636231 CCACCGGGAGCAGGACAA 61.636 66.667 6.32 0.00 35.59 3.18
564 566 2.046892 CACCGGGAGCAGGACAAG 60.047 66.667 6.32 0.00 0.00 3.16
565 567 3.322466 ACCGGGAGCAGGACAAGG 61.322 66.667 6.32 0.00 0.00 3.61
566 568 3.003173 CCGGGAGCAGGACAAGGA 61.003 66.667 0.00 0.00 0.00 3.36
567 569 2.266055 CGGGAGCAGGACAAGGAC 59.734 66.667 0.00 0.00 0.00 3.85
568 570 2.583441 CGGGAGCAGGACAAGGACA 61.583 63.158 0.00 0.00 0.00 4.02
569 571 1.298014 GGGAGCAGGACAAGGACAG 59.702 63.158 0.00 0.00 0.00 3.51
570 572 1.376553 GGAGCAGGACAAGGACAGC 60.377 63.158 0.00 0.00 0.00 4.40
571 573 1.376553 GAGCAGGACAAGGACAGCC 60.377 63.158 0.00 0.00 0.00 4.85
572 574 2.116983 GAGCAGGACAAGGACAGCCA 62.117 60.000 0.00 0.00 36.29 4.75
573 575 1.968540 GCAGGACAAGGACAGCCAC 60.969 63.158 0.00 0.00 36.29 5.01
792 809 2.383527 GCGCCACACGGAGAAGAAG 61.384 63.158 0.00 0.00 43.93 2.85
819 836 0.598680 GGCGGGATGAGTTCGATGAG 60.599 60.000 0.00 0.00 0.00 2.90
955 975 0.742635 GAGGCAGCGGAAGAAGAAGG 60.743 60.000 0.00 0.00 0.00 3.46
956 976 1.003233 GGCAGCGGAAGAAGAAGGT 60.003 57.895 0.00 0.00 0.00 3.50
957 977 0.606673 GGCAGCGGAAGAAGAAGGTT 60.607 55.000 0.00 0.00 0.00 3.50
961 981 1.694696 AGCGGAAGAAGAAGGTTGAGT 59.305 47.619 0.00 0.00 0.00 3.41
967 987 5.509163 CGGAAGAAGAAGGTTGAGTAAGACA 60.509 44.000 0.00 0.00 0.00 3.41
968 988 5.697178 GGAAGAAGAAGGTTGAGTAAGACAC 59.303 44.000 0.00 0.00 0.00 3.67
969 989 5.871396 AGAAGAAGGTTGAGTAAGACACA 57.129 39.130 0.00 0.00 0.00 3.72
998 1060 3.191539 GCGGCGGCAGAAGAAGAG 61.192 66.667 9.78 0.00 39.62 2.85
1014 1118 3.710677 AGAAGAGGATGGAGGAAGACATG 59.289 47.826 0.00 0.00 0.00 3.21
1016 1120 0.842635 AGGATGGAGGAAGACATGGC 59.157 55.000 0.00 0.00 0.00 4.40
1115 1219 2.159819 GAGCAGCAAGAGGACGGTGA 62.160 60.000 0.00 0.00 32.37 4.02
1248 1352 0.179134 CGAACGGAGGAACTAGCAGG 60.179 60.000 0.00 0.00 41.55 4.85
1309 1413 5.037385 CGTTCATGAACTCGATACAGATGT 58.963 41.667 30.45 0.00 39.08 3.06
1336 1440 2.299993 GACAACATCGATGGAGAGCA 57.700 50.000 28.09 0.00 0.00 4.26
1463 1567 0.760567 CCTGAGGGTGGATCGGATGA 60.761 60.000 0.00 0.00 0.00 2.92
1468 1572 2.411701 GTGGATCGGATGACGCGA 59.588 61.111 15.93 0.00 43.86 5.87
1469 1573 1.944676 GTGGATCGGATGACGCGAC 60.945 63.158 15.93 7.62 43.86 5.19
1470 1574 2.354773 GGATCGGATGACGCGACC 60.355 66.667 15.93 9.70 43.86 4.79
1536 1643 1.672854 CCGCCGACCACTCCAAGATA 61.673 60.000 0.00 0.00 0.00 1.98
1686 1793 3.066900 CGATAAAGACGTGGATCCAGAGT 59.933 47.826 16.81 18.44 0.00 3.24
1926 2033 4.828925 GCGCCCACCAGAGAGCTC 62.829 72.222 5.27 5.27 0.00 4.09
1941 2048 3.161067 AGAGCTCGTGGTGCAGATATAT 58.839 45.455 8.37 0.00 0.00 0.86
2076 2183 4.241555 ACGCCGGGCAGGATGATC 62.242 66.667 20.71 0.00 45.00 2.92
2080 2187 2.355126 CGGGCAGGATGATCGACG 60.355 66.667 0.00 0.00 39.69 5.12
2129 2236 3.382832 CCTCCGGCGAGTGACCTT 61.383 66.667 9.30 0.00 33.93 3.50
2241 2348 2.811317 GTGCTCTTCTCCGCCACG 60.811 66.667 0.00 0.00 0.00 4.94
2466 2573 0.036732 AGTGCGATTCCCTGCTCAAA 59.963 50.000 0.00 0.00 0.00 2.69
2505 2612 1.074623 CCCCTGCCTCTCTCTCCAT 60.075 63.158 0.00 0.00 0.00 3.41
2508 2615 1.409251 CCTGCCTCTCTCTCCATGGG 61.409 65.000 13.02 2.57 0.00 4.00
2523 2630 2.178544 CCATGGGGGAAAGGATCAGAAT 59.821 50.000 2.85 0.00 40.01 2.40
2616 2723 2.820197 GAGGGGTTTGGATGTCAAAGAC 59.180 50.000 0.00 0.00 45.00 3.01
2625 2732 2.535331 GATGTCAAAGACCTCGAGCTC 58.465 52.381 6.99 2.73 0.00 4.09
2628 2735 0.522180 TCAAAGACCTCGAGCTCGTC 59.478 55.000 33.33 23.90 40.80 4.20
2652 2759 3.007506 TCAACTACGATGTCACCAACCAT 59.992 43.478 0.00 0.00 0.00 3.55
2655 2762 5.353394 ACTACGATGTCACCAACCATTAT 57.647 39.130 0.00 0.00 0.00 1.28
2667 2774 5.760253 CACCAACCATTATGAGGACTATGTC 59.240 44.000 0.00 0.00 0.00 3.06
2865 2972 1.361668 CGGAGAAGGCACATGGAACG 61.362 60.000 0.00 0.00 0.00 3.95
2934 3041 3.710722 CAGTCGGCAAGGAGGGCT 61.711 66.667 0.00 0.00 0.00 5.19
2970 3077 2.124403 TACGAGGAGGACGAGCCC 60.124 66.667 0.00 0.00 37.37 5.19
3092 3199 4.400961 GCCAGCGTTGCTCCCTCT 62.401 66.667 0.00 0.00 36.40 3.69
3102 3209 3.541713 CTCCCTCTACCGGCTGCC 61.542 72.222 9.11 9.11 0.00 4.85
3219 3326 0.450583 TCGAGATCAACGACTTCCCG 59.549 55.000 10.16 0.00 34.85 5.14
3429 3536 3.069586 TGAAGAGTGTCGTTGAGGATTGT 59.930 43.478 0.00 0.00 0.00 2.71
3508 3621 3.826157 TGTTGGAATTTACTCCTGCTTGG 59.174 43.478 0.00 0.00 36.35 3.61
3520 3633 2.025037 TCCTGCTTGGCAAAGGTATCAT 60.025 45.455 15.72 0.00 38.41 2.45
3522 3635 4.141181 TCCTGCTTGGCAAAGGTATCATAT 60.141 41.667 15.72 0.00 38.41 1.78
3528 3641 9.013229 TGCTTGGCAAAGGTATCATATATTTAG 57.987 33.333 2.26 0.00 34.76 1.85
3555 3668 6.434028 ACAATATTGGTTGCTTGTGTGTAGAT 59.566 34.615 19.37 0.00 31.00 1.98
3731 3848 9.461312 TTCTGGAAATTTACTACTATGTGCAAT 57.539 29.630 1.27 0.00 0.00 3.56
3732 3849 9.461312 TCTGGAAATTTACTACTATGTGCAATT 57.539 29.630 1.27 0.00 0.00 2.32
3876 3994 3.084039 TGATGATGGAAGGAAGCACAAC 58.916 45.455 0.00 0.00 0.00 3.32
4172 4314 2.275184 GTCGTATAAATTTGTCGCGCG 58.725 47.619 26.76 26.76 0.00 6.86
4263 4407 9.213777 ACTCCCTCTGTTCACAAATATAAGATA 57.786 33.333 0.00 0.00 0.00 1.98
4293 4437 7.895870 ACATATTTTGTTACTCTTCATCGACG 58.104 34.615 0.00 0.00 33.74 5.12
4294 4438 7.758076 ACATATTTTGTTACTCTTCATCGACGA 59.242 33.333 0.00 0.00 33.74 4.20
4295 4439 8.592155 CATATTTTGTTACTCTTCATCGACGAA 58.408 33.333 0.00 0.00 0.00 3.85
4296 4440 5.817616 TTTGTTACTCTTCATCGACGAAC 57.182 39.130 0.00 0.00 0.00 3.95
4297 4441 3.829948 TGTTACTCTTCATCGACGAACC 58.170 45.455 0.00 0.00 0.00 3.62
4298 4442 3.177487 GTTACTCTTCATCGACGAACCC 58.823 50.000 0.00 0.00 0.00 4.11
4299 4443 1.254026 ACTCTTCATCGACGAACCCA 58.746 50.000 0.00 0.00 0.00 4.51
4300 4444 1.202582 ACTCTTCATCGACGAACCCAG 59.797 52.381 0.00 0.00 0.00 4.45
4301 4445 1.472878 CTCTTCATCGACGAACCCAGA 59.527 52.381 0.00 0.57 0.00 3.86
4302 4446 1.201647 TCTTCATCGACGAACCCAGAC 59.798 52.381 0.00 0.00 0.00 3.51
4303 4447 0.109458 TTCATCGACGAACCCAGACG 60.109 55.000 0.00 0.00 0.00 4.18
4304 4448 2.158959 CATCGACGAACCCAGACGC 61.159 63.158 0.00 0.00 0.00 5.19
4305 4449 2.632544 ATCGACGAACCCAGACGCA 61.633 57.895 0.00 0.00 0.00 5.24
4306 4450 2.814183 ATCGACGAACCCAGACGCAC 62.814 60.000 0.00 0.00 0.00 5.34
4307 4451 2.338984 GACGAACCCAGACGCACT 59.661 61.111 0.00 0.00 0.00 4.40
4308 4452 1.733399 GACGAACCCAGACGCACTC 60.733 63.158 0.00 0.00 0.00 3.51
4309 4453 2.143594 GACGAACCCAGACGCACTCT 62.144 60.000 0.00 0.00 0.00 3.24
4310 4454 1.444553 CGAACCCAGACGCACTCTC 60.445 63.158 0.00 0.00 0.00 3.20
4311 4455 1.867919 CGAACCCAGACGCACTCTCT 61.868 60.000 0.00 0.00 0.00 3.10
4312 4456 0.389166 GAACCCAGACGCACTCTCTG 60.389 60.000 0.00 0.00 35.78 3.35
4315 4459 2.125753 CAGACGCACTCTCTGGGC 60.126 66.667 0.00 0.00 42.86 5.36
4316 4460 2.283532 AGACGCACTCTCTGGGCT 60.284 61.111 0.00 0.00 44.45 5.19
4317 4461 2.125753 GACGCACTCTCTGGGCTG 60.126 66.667 0.00 0.00 44.45 4.85
4318 4462 2.601666 ACGCACTCTCTGGGCTGA 60.602 61.111 0.00 0.00 44.45 4.26
4319 4463 2.159819 GACGCACTCTCTGGGCTGAA 62.160 60.000 0.00 0.00 44.45 3.02
4320 4464 1.447489 CGCACTCTCTGGGCTGAAG 60.447 63.158 0.00 0.00 44.45 3.02
4321 4465 1.744741 GCACTCTCTGGGCTGAAGC 60.745 63.158 0.00 0.00 43.01 3.86
4322 4466 1.981636 CACTCTCTGGGCTGAAGCT 59.018 57.895 1.74 0.00 41.70 3.74
4323 4467 0.391395 CACTCTCTGGGCTGAAGCTG 60.391 60.000 1.74 0.00 41.70 4.24
4324 4468 0.543883 ACTCTCTGGGCTGAAGCTGA 60.544 55.000 1.74 0.00 41.70 4.26
4325 4469 0.176219 CTCTCTGGGCTGAAGCTGAG 59.824 60.000 1.74 7.92 41.70 3.35
4326 4470 1.221293 CTCTGGGCTGAAGCTGAGG 59.779 63.158 1.74 0.00 41.70 3.86
4327 4471 2.254737 CTCTGGGCTGAAGCTGAGGG 62.255 65.000 1.74 0.00 41.70 4.30
4328 4472 2.203983 TGGGCTGAAGCTGAGGGA 60.204 61.111 1.74 0.00 41.70 4.20
4329 4473 2.270527 GGGCTGAAGCTGAGGGAC 59.729 66.667 1.74 0.00 41.70 4.46
4330 4474 2.125350 GGCTGAAGCTGAGGGACG 60.125 66.667 1.74 0.00 41.70 4.79
4331 4475 2.125350 GCTGAAGCTGAGGGACGG 60.125 66.667 0.00 0.00 38.21 4.79
4373 4517 3.120105 CGCCACCGCTCTCTGATA 58.880 61.111 0.00 0.00 0.00 2.15
4374 4518 1.299468 CGCCACCGCTCTCTGATAC 60.299 63.158 0.00 0.00 0.00 2.24
4375 4519 1.068250 GCCACCGCTCTCTGATACC 59.932 63.158 0.00 0.00 0.00 2.73
4376 4520 1.742768 CCACCGCTCTCTGATACCC 59.257 63.158 0.00 0.00 0.00 3.69
4377 4521 1.742768 CACCGCTCTCTGATACCCC 59.257 63.158 0.00 0.00 0.00 4.95
4378 4522 1.043116 CACCGCTCTCTGATACCCCA 61.043 60.000 0.00 0.00 0.00 4.96
4379 4523 0.105453 ACCGCTCTCTGATACCCCAT 60.105 55.000 0.00 0.00 0.00 4.00
4380 4524 0.605589 CCGCTCTCTGATACCCCATC 59.394 60.000 0.00 0.00 0.00 3.51
4381 4525 0.242286 CGCTCTCTGATACCCCATCG 59.758 60.000 0.00 0.00 36.33 3.84
4382 4526 1.621992 GCTCTCTGATACCCCATCGA 58.378 55.000 0.00 0.00 36.33 3.59
4383 4527 2.175202 GCTCTCTGATACCCCATCGAT 58.825 52.381 0.00 0.00 36.33 3.59
4384 4528 3.357203 GCTCTCTGATACCCCATCGATA 58.643 50.000 0.00 0.00 36.33 2.92
4385 4529 3.957497 GCTCTCTGATACCCCATCGATAT 59.043 47.826 0.00 0.00 36.33 1.63
4386 4530 4.404073 GCTCTCTGATACCCCATCGATATT 59.596 45.833 0.00 0.00 36.33 1.28
4387 4531 5.594725 GCTCTCTGATACCCCATCGATATTA 59.405 44.000 0.00 0.00 36.33 0.98
4388 4532 6.460399 GCTCTCTGATACCCCATCGATATTAC 60.460 46.154 0.00 0.00 36.33 1.89
4389 4533 5.589050 TCTCTGATACCCCATCGATATTACG 59.411 44.000 0.00 0.00 36.33 3.18
4390 4534 4.643334 TCTGATACCCCATCGATATTACGG 59.357 45.833 0.00 0.00 36.33 4.02
4391 4535 4.346730 TGATACCCCATCGATATTACGGT 58.653 43.478 0.00 2.07 36.33 4.83
4392 4536 4.400251 TGATACCCCATCGATATTACGGTC 59.600 45.833 0.00 0.00 36.33 4.79
4393 4537 2.885616 ACCCCATCGATATTACGGTCT 58.114 47.619 0.00 0.00 0.00 3.85
4394 4538 3.236896 ACCCCATCGATATTACGGTCTT 58.763 45.455 0.00 0.00 0.00 3.01
4395 4539 3.006537 ACCCCATCGATATTACGGTCTTG 59.993 47.826 0.00 0.00 0.00 3.02
4396 4540 3.585862 CCCATCGATATTACGGTCTTGG 58.414 50.000 0.00 0.00 0.00 3.61
4397 4541 2.993899 CCATCGATATTACGGTCTTGGC 59.006 50.000 0.00 0.00 0.00 4.52
4398 4542 2.410785 TCGATATTACGGTCTTGGCG 57.589 50.000 0.00 0.00 0.00 5.69
4399 4543 1.948834 TCGATATTACGGTCTTGGCGA 59.051 47.619 0.00 0.00 0.00 5.54
4400 4544 2.358582 TCGATATTACGGTCTTGGCGAA 59.641 45.455 0.00 0.00 0.00 4.70
4401 4545 3.005050 TCGATATTACGGTCTTGGCGAAT 59.995 43.478 0.00 0.00 0.00 3.34
4402 4546 4.216042 TCGATATTACGGTCTTGGCGAATA 59.784 41.667 0.00 0.00 0.00 1.75
4403 4547 4.322804 CGATATTACGGTCTTGGCGAATAC 59.677 45.833 0.00 0.00 0.00 1.89
4404 4548 3.814005 ATTACGGTCTTGGCGAATACT 57.186 42.857 0.00 0.00 0.00 2.12
4405 4549 4.924305 ATTACGGTCTTGGCGAATACTA 57.076 40.909 0.00 0.00 0.00 1.82
4406 4550 4.924305 TTACGGTCTTGGCGAATACTAT 57.076 40.909 0.00 0.00 0.00 2.12
4407 4551 3.093717 ACGGTCTTGGCGAATACTATG 57.906 47.619 0.00 0.00 0.00 2.23
4408 4552 2.223971 ACGGTCTTGGCGAATACTATGG 60.224 50.000 0.00 0.00 0.00 2.74
4409 4553 2.223971 CGGTCTTGGCGAATACTATGGT 60.224 50.000 0.00 0.00 0.00 3.55
4410 4554 3.131396 GGTCTTGGCGAATACTATGGTG 58.869 50.000 0.00 0.00 0.00 4.17
4411 4555 3.131396 GTCTTGGCGAATACTATGGTGG 58.869 50.000 0.00 0.00 0.00 4.61
4412 4556 3.035363 TCTTGGCGAATACTATGGTGGA 58.965 45.455 0.00 0.00 0.00 4.02
4413 4557 2.902705 TGGCGAATACTATGGTGGAC 57.097 50.000 0.00 0.00 0.00 4.02
4414 4558 2.112190 TGGCGAATACTATGGTGGACA 58.888 47.619 0.00 0.00 0.00 4.02
4415 4559 2.102420 TGGCGAATACTATGGTGGACAG 59.898 50.000 0.00 0.00 0.00 3.51
4416 4560 2.102588 GGCGAATACTATGGTGGACAGT 59.897 50.000 0.00 0.00 0.00 3.55
4417 4561 3.123804 GCGAATACTATGGTGGACAGTG 58.876 50.000 0.00 0.00 0.00 3.66
4418 4562 3.430374 GCGAATACTATGGTGGACAGTGT 60.430 47.826 0.00 0.00 0.00 3.55
4419 4563 4.112634 CGAATACTATGGTGGACAGTGTG 58.887 47.826 0.00 0.00 0.00 3.82
4420 4564 4.442706 GAATACTATGGTGGACAGTGTGG 58.557 47.826 0.00 0.00 0.00 4.17
4421 4565 0.324943 ACTATGGTGGACAGTGTGGC 59.675 55.000 0.00 0.00 0.00 5.01
4422 4566 0.740868 CTATGGTGGACAGTGTGGCG 60.741 60.000 0.00 0.00 0.00 5.69
4423 4567 2.796483 TATGGTGGACAGTGTGGCGC 62.796 60.000 0.00 0.00 0.00 6.53
4428 4572 4.760047 GACAGTGTGGCGCCGGAT 62.760 66.667 23.90 4.45 0.00 4.18
4471 4615 4.181010 CTCCATCCCCGCCCACTG 62.181 72.222 0.00 0.00 0.00 3.66
4474 4618 4.802051 CATCCCCGCCCACTGGTG 62.802 72.222 0.00 0.00 42.11 4.17
4477 4621 4.802051 CCCCGCCCACTGGTGATG 62.802 72.222 1.93 0.00 45.51 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.319211 TGTCGGTCATTGTCGGTGTC 60.319 55.000 0.00 0.00 0.00 3.67
1 2 0.320374 ATGTCGGTCATTGTCGGTGT 59.680 50.000 0.00 0.00 32.08 4.16
3 4 0.457853 CGATGTCGGTCATTGTCGGT 60.458 55.000 0.00 0.00 36.83 4.69
4 5 0.179148 TCGATGTCGGTCATTGTCGG 60.179 55.000 2.25 0.00 38.65 4.79
5 6 1.840181 ATCGATGTCGGTCATTGTCG 58.160 50.000 0.00 0.00 38.65 4.35
12 13 0.383246 CGTCTCGATCGATGTCGGTC 60.383 60.000 19.78 5.63 45.35 4.79
13 14 1.642215 CGTCTCGATCGATGTCGGT 59.358 57.895 19.78 0.00 41.74 4.69
14 15 1.722852 GCGTCTCGATCGATGTCGG 60.723 63.158 19.78 6.62 41.74 4.79
15 16 2.064258 CGCGTCTCGATCGATGTCG 61.064 63.158 19.78 21.66 41.67 4.35
16 17 1.722852 CCGCGTCTCGATCGATGTC 60.723 63.158 19.78 10.78 41.67 3.06
17 18 2.328289 CCGCGTCTCGATCGATGT 59.672 61.111 19.78 0.00 41.67 3.06
18 19 3.094058 GCCGCGTCTCGATCGATG 61.094 66.667 19.78 12.60 41.67 3.84
19 20 2.990674 CTTGCCGCGTCTCGATCGAT 62.991 60.000 19.78 0.00 41.67 3.59
20 21 3.734834 CTTGCCGCGTCTCGATCGA 62.735 63.158 18.32 18.32 41.67 3.59
21 22 3.315521 CTTGCCGCGTCTCGATCG 61.316 66.667 9.36 9.36 41.67 3.69
22 23 2.956964 CCTTGCCGCGTCTCGATC 60.957 66.667 4.92 0.00 41.67 3.69
23 24 2.781595 AAACCTTGCCGCGTCTCGAT 62.782 55.000 4.92 0.00 41.67 3.59
24 25 2.981977 AAAACCTTGCCGCGTCTCGA 62.982 55.000 4.92 0.00 41.67 4.04
25 26 2.113131 AAAAACCTTGCCGCGTCTCG 62.113 55.000 4.92 0.00 38.08 4.04
26 27 0.660300 CAAAAACCTTGCCGCGTCTC 60.660 55.000 4.92 0.00 0.00 3.36
27 28 1.358759 CAAAAACCTTGCCGCGTCT 59.641 52.632 4.92 0.00 0.00 4.18
28 29 1.660264 CCAAAAACCTTGCCGCGTC 60.660 57.895 4.92 0.00 0.00 5.19
29 30 1.950973 AACCAAAAACCTTGCCGCGT 61.951 50.000 4.92 0.00 0.00 6.01
30 31 0.808060 AAACCAAAAACCTTGCCGCG 60.808 50.000 0.00 0.00 0.00 6.46
31 32 1.374560 AAAACCAAAAACCTTGCCGC 58.625 45.000 0.00 0.00 0.00 6.53
32 33 2.096657 CCAAAAACCAAAAACCTTGCCG 59.903 45.455 0.00 0.00 0.00 5.69
33 34 2.425312 CCCAAAAACCAAAAACCTTGCC 59.575 45.455 0.00 0.00 0.00 4.52
34 35 3.085533 ACCCAAAAACCAAAAACCTTGC 58.914 40.909 0.00 0.00 0.00 4.01
35 36 4.082517 CCAACCCAAAAACCAAAAACCTTG 60.083 41.667 0.00 0.00 0.00 3.61
36 37 4.082845 CCAACCCAAAAACCAAAAACCTT 58.917 39.130 0.00 0.00 0.00 3.50
37 38 3.691575 CCAACCCAAAAACCAAAAACCT 58.308 40.909 0.00 0.00 0.00 3.50
38 39 2.164624 GCCAACCCAAAAACCAAAAACC 59.835 45.455 0.00 0.00 0.00 3.27
39 40 3.085533 AGCCAACCCAAAAACCAAAAAC 58.914 40.909 0.00 0.00 0.00 2.43
40 41 3.009584 AGAGCCAACCCAAAAACCAAAAA 59.990 39.130 0.00 0.00 0.00 1.94
41 42 2.573915 AGAGCCAACCCAAAAACCAAAA 59.426 40.909 0.00 0.00 0.00 2.44
42 43 2.192263 AGAGCCAACCCAAAAACCAAA 58.808 42.857 0.00 0.00 0.00 3.28
43 44 1.872773 AGAGCCAACCCAAAAACCAA 58.127 45.000 0.00 0.00 0.00 3.67
44 45 1.872773 AAGAGCCAACCCAAAAACCA 58.127 45.000 0.00 0.00 0.00 3.67
45 46 2.942376 CAAAAGAGCCAACCCAAAAACC 59.058 45.455 0.00 0.00 0.00 3.27
46 47 3.373748 CACAAAAGAGCCAACCCAAAAAC 59.626 43.478 0.00 0.00 0.00 2.43
47 48 3.008485 ACACAAAAGAGCCAACCCAAAAA 59.992 39.130 0.00 0.00 0.00 1.94
48 49 2.569404 ACACAAAAGAGCCAACCCAAAA 59.431 40.909 0.00 0.00 0.00 2.44
49 50 2.183679 ACACAAAAGAGCCAACCCAAA 58.816 42.857 0.00 0.00 0.00 3.28
50 51 1.859302 ACACAAAAGAGCCAACCCAA 58.141 45.000 0.00 0.00 0.00 4.12
51 52 1.480137 CAACACAAAAGAGCCAACCCA 59.520 47.619 0.00 0.00 0.00 4.51
52 53 1.480545 ACAACACAAAAGAGCCAACCC 59.519 47.619 0.00 0.00 0.00 4.11
53 54 2.929398 CAACAACACAAAAGAGCCAACC 59.071 45.455 0.00 0.00 0.00 3.77
54 55 3.584834 ACAACAACACAAAAGAGCCAAC 58.415 40.909 0.00 0.00 0.00 3.77
55 56 3.951775 ACAACAACACAAAAGAGCCAA 57.048 38.095 0.00 0.00 0.00 4.52
56 57 5.105554 ACAATACAACAACACAAAAGAGCCA 60.106 36.000 0.00 0.00 0.00 4.75
57 58 5.348164 ACAATACAACAACACAAAAGAGCC 58.652 37.500 0.00 0.00 0.00 4.70
58 59 5.171337 CGACAATACAACAACACAAAAGAGC 59.829 40.000 0.00 0.00 0.00 4.09
59 60 6.194508 CACGACAATACAACAACACAAAAGAG 59.805 38.462 0.00 0.00 0.00 2.85
60 61 6.024664 CACGACAATACAACAACACAAAAGA 58.975 36.000 0.00 0.00 0.00 2.52
61 62 5.229052 CCACGACAATACAACAACACAAAAG 59.771 40.000 0.00 0.00 0.00 2.27
62 63 5.096169 CCACGACAATACAACAACACAAAA 58.904 37.500 0.00 0.00 0.00 2.44
63 64 4.395231 TCCACGACAATACAACAACACAAA 59.605 37.500 0.00 0.00 0.00 2.83
64 65 3.939592 TCCACGACAATACAACAACACAA 59.060 39.130 0.00 0.00 0.00 3.33
65 66 3.532542 TCCACGACAATACAACAACACA 58.467 40.909 0.00 0.00 0.00 3.72
66 67 4.463209 CATCCACGACAATACAACAACAC 58.537 43.478 0.00 0.00 0.00 3.32
67 68 3.500299 CCATCCACGACAATACAACAACA 59.500 43.478 0.00 0.00 0.00 3.33
68 69 3.669557 GCCATCCACGACAATACAACAAC 60.670 47.826 0.00 0.00 0.00 3.32
69 70 2.486203 GCCATCCACGACAATACAACAA 59.514 45.455 0.00 0.00 0.00 2.83
70 71 2.080693 GCCATCCACGACAATACAACA 58.919 47.619 0.00 0.00 0.00 3.33
71 72 2.095853 CAGCCATCCACGACAATACAAC 59.904 50.000 0.00 0.00 0.00 3.32
72 73 2.290008 ACAGCCATCCACGACAATACAA 60.290 45.455 0.00 0.00 0.00 2.41
73 74 1.277842 ACAGCCATCCACGACAATACA 59.722 47.619 0.00 0.00 0.00 2.29
74 75 1.933853 GACAGCCATCCACGACAATAC 59.066 52.381 0.00 0.00 0.00 1.89
75 76 1.134521 GGACAGCCATCCACGACAATA 60.135 52.381 0.00 0.00 38.77 1.90
76 77 0.392998 GGACAGCCATCCACGACAAT 60.393 55.000 0.00 0.00 38.77 2.71
77 78 1.003839 GGACAGCCATCCACGACAA 60.004 57.895 0.00 0.00 38.77 3.18
78 79 1.480212 AAGGACAGCCATCCACGACA 61.480 55.000 6.62 0.00 41.73 4.35
79 80 0.321653 AAAGGACAGCCATCCACGAC 60.322 55.000 6.62 0.00 41.73 4.34
80 81 0.321564 CAAAGGACAGCCATCCACGA 60.322 55.000 6.62 0.00 41.73 4.35
81 82 1.308069 CCAAAGGACAGCCATCCACG 61.308 60.000 6.62 0.00 41.73 4.94
82 83 0.038166 TCCAAAGGACAGCCATCCAC 59.962 55.000 6.62 0.00 41.73 4.02
83 84 2.473768 TCCAAAGGACAGCCATCCA 58.526 52.632 6.62 0.00 41.73 3.41
93 94 1.229400 ACCCGGCTAGTCCAAAGGA 60.229 57.895 0.00 0.00 34.01 3.36
94 95 1.078426 CACCCGGCTAGTCCAAAGG 60.078 63.158 0.00 4.06 34.01 3.11
95 96 0.673644 CACACCCGGCTAGTCCAAAG 60.674 60.000 0.00 0.00 34.01 2.77
96 97 1.373435 CACACCCGGCTAGTCCAAA 59.627 57.895 0.00 0.00 34.01 3.28
97 98 2.589157 CCACACCCGGCTAGTCCAA 61.589 63.158 0.00 0.00 34.01 3.53
98 99 3.000819 CCACACCCGGCTAGTCCA 61.001 66.667 0.00 0.00 34.01 4.02
99 100 2.682494 TCCACACCCGGCTAGTCC 60.682 66.667 0.00 0.00 0.00 3.85
100 101 1.542187 AACTCCACACCCGGCTAGTC 61.542 60.000 0.00 0.00 0.00 2.59
101 102 1.535687 AACTCCACACCCGGCTAGT 60.536 57.895 0.00 0.00 0.00 2.57
102 103 1.079127 CAACTCCACACCCGGCTAG 60.079 63.158 0.00 0.00 0.00 3.42
103 104 1.839747 ACAACTCCACACCCGGCTA 60.840 57.895 0.00 0.00 0.00 3.93
104 105 3.168528 ACAACTCCACACCCGGCT 61.169 61.111 0.00 0.00 0.00 5.52
105 106 2.978010 CACAACTCCACACCCGGC 60.978 66.667 0.00 0.00 0.00 6.13
106 107 2.107041 TAGCACAACTCCACACCCGG 62.107 60.000 0.00 0.00 0.00 5.73
107 108 0.949105 GTAGCACAACTCCACACCCG 60.949 60.000 0.00 0.00 0.00 5.28
108 109 0.107831 TGTAGCACAACTCCACACCC 59.892 55.000 0.00 0.00 0.00 4.61
109 110 1.202651 AGTGTAGCACAACTCCACACC 60.203 52.381 2.01 0.00 37.68 4.16
110 111 2.135933 GAGTGTAGCACAACTCCACAC 58.864 52.381 2.01 0.00 37.68 3.82
111 112 1.269569 CGAGTGTAGCACAACTCCACA 60.270 52.381 2.01 0.00 37.68 4.17
112 113 1.269621 ACGAGTGTAGCACAACTCCAC 60.270 52.381 2.01 0.00 35.53 4.02
113 114 1.037493 ACGAGTGTAGCACAACTCCA 58.963 50.000 2.01 0.00 36.74 3.86
114 115 1.792949 CAACGAGTGTAGCACAACTCC 59.207 52.381 2.01 0.00 36.74 3.85
115 116 2.470821 ACAACGAGTGTAGCACAACTC 58.529 47.619 2.01 3.34 39.29 3.01
116 117 2.596904 ACAACGAGTGTAGCACAACT 57.403 45.000 2.01 0.00 39.29 3.16
117 118 2.347292 CGAACAACGAGTGTAGCACAAC 60.347 50.000 2.01 0.00 45.77 3.32
118 119 1.855978 CGAACAACGAGTGTAGCACAA 59.144 47.619 2.01 0.00 45.77 3.33
119 120 1.483316 CGAACAACGAGTGTAGCACA 58.517 50.000 2.01 0.00 45.77 4.57
120 121 0.161024 GCGAACAACGAGTGTAGCAC 59.839 55.000 14.40 0.00 45.77 4.40
121 122 1.272784 CGCGAACAACGAGTGTAGCA 61.273 55.000 0.00 0.00 45.77 3.49
122 123 1.411089 CGCGAACAACGAGTGTAGC 59.589 57.895 0.00 2.07 45.77 3.58
123 124 0.386352 TCCGCGAACAACGAGTGTAG 60.386 55.000 8.23 0.00 45.77 2.74
124 125 0.386352 CTCCGCGAACAACGAGTGTA 60.386 55.000 8.23 0.00 45.77 2.90
125 126 1.660575 CTCCGCGAACAACGAGTGT 60.661 57.895 8.23 0.00 45.77 3.55
126 127 1.660575 ACTCCGCGAACAACGAGTG 60.661 57.895 8.23 0.00 45.77 3.51
127 128 1.660575 CACTCCGCGAACAACGAGT 60.661 57.895 8.23 7.77 45.77 4.18
128 129 2.372690 CCACTCCGCGAACAACGAG 61.373 63.158 8.23 7.01 45.77 4.18
129 130 1.794151 TACCACTCCGCGAACAACGA 61.794 55.000 8.23 0.00 45.77 3.85
130 131 1.342082 CTACCACTCCGCGAACAACG 61.342 60.000 8.23 0.00 45.66 4.10
131 132 0.319297 ACTACCACTCCGCGAACAAC 60.319 55.000 8.23 0.00 0.00 3.32
132 133 0.390124 AACTACCACTCCGCGAACAA 59.610 50.000 8.23 0.00 0.00 2.83
133 134 0.319211 CAACTACCACTCCGCGAACA 60.319 55.000 8.23 0.00 0.00 3.18
134 135 0.319297 ACAACTACCACTCCGCGAAC 60.319 55.000 8.23 0.00 0.00 3.95
135 136 0.038892 GACAACTACCACTCCGCGAA 60.039 55.000 8.23 0.00 0.00 4.70
136 137 0.892358 AGACAACTACCACTCCGCGA 60.892 55.000 8.23 0.00 0.00 5.87
137 138 0.038526 AAGACAACTACCACTCCGCG 60.039 55.000 0.00 0.00 0.00 6.46
138 139 1.270147 ACAAGACAACTACCACTCCGC 60.270 52.381 0.00 0.00 0.00 5.54
139 140 2.814280 ACAAGACAACTACCACTCCG 57.186 50.000 0.00 0.00 0.00 4.63
140 141 4.868314 AGTACAAGACAACTACCACTCC 57.132 45.455 0.00 0.00 0.00 3.85
141 142 6.742109 TGTAAGTACAAGACAACTACCACTC 58.258 40.000 0.00 0.00 32.40 3.51
142 143 6.720112 TGTAAGTACAAGACAACTACCACT 57.280 37.500 0.00 0.00 32.40 4.00
169 170 9.291664 GCGTACCATAGCTTTATAGAATAAGAG 57.708 37.037 0.00 0.00 0.00 2.85
170 171 8.799367 TGCGTACCATAGCTTTATAGAATAAGA 58.201 33.333 0.00 0.00 0.00 2.10
171 172 8.981724 TGCGTACCATAGCTTTATAGAATAAG 57.018 34.615 0.00 0.00 0.00 1.73
172 173 9.938280 ATTGCGTACCATAGCTTTATAGAATAA 57.062 29.630 0.00 0.00 0.00 1.40
173 174 9.938280 AATTGCGTACCATAGCTTTATAGAATA 57.062 29.630 0.00 0.00 0.00 1.75
174 175 8.848474 AATTGCGTACCATAGCTTTATAGAAT 57.152 30.769 0.00 0.00 0.00 2.40
175 176 8.671384 AAATTGCGTACCATAGCTTTATAGAA 57.329 30.769 0.00 0.00 0.00 2.10
176 177 9.199982 GTAAATTGCGTACCATAGCTTTATAGA 57.800 33.333 0.00 0.00 0.00 1.98
177 178 8.160342 CGTAAATTGCGTACCATAGCTTTATAG 58.840 37.037 0.00 0.00 0.00 1.31
178 179 7.652909 ACGTAAATTGCGTACCATAGCTTTATA 59.347 33.333 7.44 0.00 41.06 0.98
179 180 6.480981 ACGTAAATTGCGTACCATAGCTTTAT 59.519 34.615 7.44 0.00 41.06 1.40
180 181 5.811613 ACGTAAATTGCGTACCATAGCTTTA 59.188 36.000 7.44 0.00 41.06 1.85
181 182 4.632688 ACGTAAATTGCGTACCATAGCTTT 59.367 37.500 7.44 0.00 41.06 3.51
182 183 4.186159 ACGTAAATTGCGTACCATAGCTT 58.814 39.130 7.44 0.00 41.06 3.74
183 184 3.788937 ACGTAAATTGCGTACCATAGCT 58.211 40.909 7.44 0.00 41.06 3.32
213 214 6.187682 ACATTCATCGGGGAGAACTATTTTT 58.812 36.000 0.00 0.00 0.00 1.94
214 215 5.755849 ACATTCATCGGGGAGAACTATTTT 58.244 37.500 0.00 0.00 0.00 1.82
215 216 5.104527 TGACATTCATCGGGGAGAACTATTT 60.105 40.000 0.00 0.00 0.00 1.40
216 217 4.408921 TGACATTCATCGGGGAGAACTATT 59.591 41.667 0.00 0.00 0.00 1.73
217 218 3.967326 TGACATTCATCGGGGAGAACTAT 59.033 43.478 0.00 0.00 0.00 2.12
218 219 3.371034 TGACATTCATCGGGGAGAACTA 58.629 45.455 0.00 0.00 0.00 2.24
219 220 2.169352 CTGACATTCATCGGGGAGAACT 59.831 50.000 0.00 0.00 0.00 3.01
220 221 2.168521 TCTGACATTCATCGGGGAGAAC 59.831 50.000 0.00 0.00 0.00 3.01
221 222 2.466846 TCTGACATTCATCGGGGAGAA 58.533 47.619 0.00 0.00 0.00 2.87
222 223 2.159179 TCTGACATTCATCGGGGAGA 57.841 50.000 0.00 0.00 0.00 3.71
223 224 4.607293 TTATCTGACATTCATCGGGGAG 57.393 45.455 0.00 0.00 0.00 4.30
224 225 5.163205 ACATTTATCTGACATTCATCGGGGA 60.163 40.000 0.00 0.00 0.00 4.81
225 226 5.049198 CACATTTATCTGACATTCATCGGGG 60.049 44.000 0.00 0.00 0.00 5.73
226 227 5.528690 ACACATTTATCTGACATTCATCGGG 59.471 40.000 0.00 0.00 0.00 5.14
227 228 6.293081 GGACACATTTATCTGACATTCATCGG 60.293 42.308 0.00 0.00 0.00 4.18
228 229 6.481313 AGGACACATTTATCTGACATTCATCG 59.519 38.462 0.00 0.00 0.00 3.84
229 230 7.798596 AGGACACATTTATCTGACATTCATC 57.201 36.000 0.00 0.00 0.00 2.92
243 244 9.347240 CATGAGGAAAAGATATAGGACACATTT 57.653 33.333 0.00 0.00 0.00 2.32
244 245 8.717717 TCATGAGGAAAAGATATAGGACACATT 58.282 33.333 0.00 0.00 0.00 2.71
245 246 8.267620 TCATGAGGAAAAGATATAGGACACAT 57.732 34.615 0.00 0.00 0.00 3.21
246 247 7.675161 TCATGAGGAAAAGATATAGGACACA 57.325 36.000 0.00 0.00 0.00 3.72
247 248 9.566432 AATTCATGAGGAAAAGATATAGGACAC 57.434 33.333 0.00 0.00 39.39 3.67
248 249 9.784531 GAATTCATGAGGAAAAGATATAGGACA 57.215 33.333 0.00 0.00 39.39 4.02
249 250 8.930760 CGAATTCATGAGGAAAAGATATAGGAC 58.069 37.037 6.22 0.00 39.39 3.85
250 251 8.651389 ACGAATTCATGAGGAAAAGATATAGGA 58.349 33.333 6.22 0.00 39.39 2.94
251 252 8.839310 ACGAATTCATGAGGAAAAGATATAGG 57.161 34.615 6.22 0.00 39.39 2.57
282 283 3.310774 CACGAATTCATGCGGAAAGATCT 59.689 43.478 6.22 0.00 39.39 2.75
283 284 3.063997 ACACGAATTCATGCGGAAAGATC 59.936 43.478 0.50 0.00 39.39 2.75
285 286 2.159430 CACACGAATTCATGCGGAAAGA 59.841 45.455 0.50 0.00 39.39 2.52
286 287 2.508867 CACACGAATTCATGCGGAAAG 58.491 47.619 0.50 0.00 39.39 2.62
288 289 0.167908 GCACACGAATTCATGCGGAA 59.832 50.000 0.50 0.00 40.46 4.30
292 293 1.869132 GCCGCACACGAATTCATGC 60.869 57.895 13.67 13.67 43.93 4.06
295 296 3.418913 CGGCCGCACACGAATTCA 61.419 61.111 14.67 0.00 43.93 2.57
309 310 1.143305 CACATCCAGATCGAATCGGC 58.857 55.000 1.76 0.00 0.00 5.54
314 315 2.159296 CCGTACACACATCCAGATCGAA 60.159 50.000 0.00 0.00 0.00 3.71
319 320 0.892755 GACCCGTACACACATCCAGA 59.107 55.000 0.00 0.00 0.00 3.86
322 323 0.734942 CGTGACCCGTACACACATCC 60.735 60.000 0.00 0.00 38.04 3.51
324 325 1.373748 GCGTGACCCGTACACACAT 60.374 57.895 0.00 0.00 38.04 3.21
326 327 1.280206 GAAGCGTGACCCGTACACAC 61.280 60.000 0.00 0.00 38.04 3.82
330 331 0.731855 GACAGAAGCGTGACCCGTAC 60.732 60.000 0.00 0.00 39.32 3.67
332 333 2.338984 GACAGAAGCGTGACCCGT 59.661 61.111 0.00 0.00 39.32 5.28
352 353 4.188462 TGACACGGATATGGATTGTTCAC 58.812 43.478 0.00 0.00 0.00 3.18
363 364 3.350219 AACAAAGGCTGACACGGATAT 57.650 42.857 0.00 0.00 0.00 1.63
385 386 1.413382 CCGACTATCGATTGAGCTGC 58.587 55.000 13.87 0.00 43.74 5.25
386 387 1.413382 GCCGACTATCGATTGAGCTG 58.587 55.000 13.87 3.37 43.74 4.24
387 388 0.039978 CGCCGACTATCGATTGAGCT 60.040 55.000 13.87 0.00 43.74 4.09
388 389 1.004277 CCGCCGACTATCGATTGAGC 61.004 60.000 13.87 11.36 43.74 4.26
389 390 1.004277 GCCGCCGACTATCGATTGAG 61.004 60.000 13.87 3.70 43.74 3.02
390 391 1.007734 GCCGCCGACTATCGATTGA 60.008 57.895 13.87 0.00 43.74 2.57
435 437 6.602009 AGCAAGTTCTTTTATTAGGCCGTAAT 59.398 34.615 0.00 4.94 35.40 1.89
436 438 5.941647 AGCAAGTTCTTTTATTAGGCCGTAA 59.058 36.000 0.00 0.00 0.00 3.18
437 439 5.493809 AGCAAGTTCTTTTATTAGGCCGTA 58.506 37.500 0.00 0.00 0.00 4.02
438 440 4.332828 AGCAAGTTCTTTTATTAGGCCGT 58.667 39.130 0.00 0.00 0.00 5.68
439 441 4.201920 GGAGCAAGTTCTTTTATTAGGCCG 60.202 45.833 0.00 0.00 0.00 6.13
440 442 4.950475 AGGAGCAAGTTCTTTTATTAGGCC 59.050 41.667 0.00 0.00 0.00 5.19
441 443 5.066634 GGAGGAGCAAGTTCTTTTATTAGGC 59.933 44.000 0.00 0.00 0.00 3.93
442 444 6.418946 AGGAGGAGCAAGTTCTTTTATTAGG 58.581 40.000 0.00 0.00 0.00 2.69
443 445 8.261522 ACTAGGAGGAGCAAGTTCTTTTATTAG 58.738 37.037 0.00 0.00 0.00 1.73
452 454 5.242171 GGATAGTACTAGGAGGAGCAAGTTC 59.758 48.000 8.85 0.00 0.00 3.01
533 535 1.379977 CGGTGGTAGAGCCTGGAGA 60.380 63.158 0.00 0.00 38.35 3.71
544 546 2.682494 GTCCTGCTCCCGGTGGTA 60.682 66.667 0.00 0.00 0.00 3.25
555 557 1.968540 GTGGCTGTCCTTGTCCTGC 60.969 63.158 0.00 0.00 0.00 4.85
562 564 4.681978 GTCGCGGTGGCTGTCCTT 62.682 66.667 6.13 0.00 36.88 3.36
570 572 4.436998 GAGGAGTGGTCGCGGTGG 62.437 72.222 6.13 0.00 0.00 4.61
571 573 4.436998 GGAGGAGTGGTCGCGGTG 62.437 72.222 6.13 0.00 0.00 4.94
572 574 4.680537 AGGAGGAGTGGTCGCGGT 62.681 66.667 6.13 0.00 0.00 5.68
573 575 3.827898 GAGGAGGAGTGGTCGCGG 61.828 72.222 6.13 0.00 0.00 6.46
681 686 1.302832 CTCCTTGTCCCTGTGGTGC 60.303 63.158 0.00 0.00 0.00 5.01
684 689 2.046892 CGCTCCTTGTCCCTGTGG 60.047 66.667 0.00 0.00 0.00 4.17
690 695 2.107141 CGATCCCGCTCCTTGTCC 59.893 66.667 0.00 0.00 0.00 4.02
725 730 4.214327 CCTTCTCCGCTCGCTCCC 62.214 72.222 0.00 0.00 0.00 4.30
782 799 0.736053 CCTCCTCGACTTCTTCTCCG 59.264 60.000 0.00 0.00 0.00 4.63
792 809 2.833582 TCATCCCGCCTCCTCGAC 60.834 66.667 0.00 0.00 0.00 4.20
830 850 3.900393 TTGCGATCGCGTTCACGGA 62.900 57.895 32.64 11.96 45.51 4.69
955 975 2.689646 GGCCTCTGTGTCTTACTCAAC 58.310 52.381 0.00 0.00 0.00 3.18
956 976 1.272490 CGGCCTCTGTGTCTTACTCAA 59.728 52.381 0.00 0.00 0.00 3.02
957 977 0.888619 CGGCCTCTGTGTCTTACTCA 59.111 55.000 0.00 0.00 0.00 3.41
961 981 0.898326 TGCTCGGCCTCTGTGTCTTA 60.898 55.000 0.00 0.00 0.00 2.10
993 1055 3.181456 CCATGTCTTCCTCCATCCTCTTC 60.181 52.174 0.00 0.00 0.00 2.87
998 1060 0.533755 CGCCATGTCTTCCTCCATCC 60.534 60.000 0.00 0.00 0.00 3.51
1119 1223 2.697761 GCCATCAGCCACAGCACTG 61.698 63.158 0.00 0.00 43.56 3.66
1152 1256 1.363744 CGTCCAAGCTCCACTTCATC 58.636 55.000 0.00 0.00 36.04 2.92
1248 1352 3.092511 TCCTCCTCCATGCCAGCC 61.093 66.667 0.00 0.00 0.00 4.85
1336 1440 3.646162 TGATAGTCCCCGTAAGCAATCAT 59.354 43.478 0.00 0.00 0.00 2.45
1454 1558 2.726180 CGGTCGCGTCATCCGATC 60.726 66.667 21.89 0.00 46.05 3.69
1458 1562 4.194720 AGCTCGGTCGCGTCATCC 62.195 66.667 5.77 4.18 34.40 3.51
1463 1567 0.801067 GTTTATCAGCTCGGTCGCGT 60.801 55.000 5.77 0.00 34.40 6.01
1468 1572 1.207329 GACAGGGTTTATCAGCTCGGT 59.793 52.381 0.00 0.00 0.00 4.69
1469 1573 1.207089 TGACAGGGTTTATCAGCTCGG 59.793 52.381 0.00 0.00 0.00 4.63
1470 1574 2.672961 TGACAGGGTTTATCAGCTCG 57.327 50.000 0.00 0.00 0.00 5.03
1503 1610 2.659610 GCGGTGACCAGCTTCTCT 59.340 61.111 1.11 0.00 0.00 3.10
1536 1643 0.325296 TCCGGAATGGCTGGTAGTCT 60.325 55.000 0.00 0.00 44.00 3.24
1708 1815 5.482006 GAATCCAAGCTTTTTAATGGTGCT 58.518 37.500 0.00 0.00 34.50 4.40
1761 1868 0.585357 CGCTCATTATCACTGGCAGC 59.415 55.000 15.89 0.00 0.00 5.25
1767 1874 0.595053 CGCGTCCGCTCATTATCACT 60.595 55.000 10.21 0.00 39.32 3.41
1926 2033 4.620982 TGTCTGAATATATCTGCACCACG 58.379 43.478 0.00 0.00 0.00 4.94
1941 2048 5.551305 TGGAGAACTTCTTGATGTCTGAA 57.449 39.130 0.00 0.00 0.00 3.02
2076 2183 2.126307 CTGGTGCAGAGGACGTCG 60.126 66.667 9.92 0.00 32.44 5.12
2097 2204 1.026718 GGAGGTTGGTGATCTTGCCG 61.027 60.000 0.00 0.00 0.00 5.69
2129 2236 2.673200 GCCTCATCCAGCACCAGGA 61.673 63.158 0.00 0.00 39.97 3.86
2139 2246 1.070445 CATCCTGTCGGCCTCATCC 59.930 63.158 0.00 0.00 0.00 3.51
2142 2249 1.596934 GAACATCCTGTCGGCCTCA 59.403 57.895 0.00 0.00 0.00 3.86
2439 2546 0.036388 GGGAATCGCACTTGTCCTGA 60.036 55.000 0.00 0.00 0.00 3.86
2505 2612 2.242196 GTCATTCTGATCCTTTCCCCCA 59.758 50.000 0.00 0.00 0.00 4.96
2508 2615 2.092914 ACGGTCATTCTGATCCTTTCCC 60.093 50.000 0.00 0.00 0.00 3.97
2523 2630 1.884075 CGAGGGTGGATTCACGGTCA 61.884 60.000 0.00 0.00 44.50 4.02
2532 2639 2.683933 AAGTCGGCGAGGGTGGAT 60.684 61.111 11.20 0.00 0.00 3.41
2535 2642 1.738099 CTTGAAGTCGGCGAGGGTG 60.738 63.158 11.20 0.00 0.00 4.61
2598 2705 2.820197 GAGGTCTTTGACATCCAAACCC 59.180 50.000 1.48 0.00 39.65 4.11
2601 2708 3.664107 CTCGAGGTCTTTGACATCCAAA 58.336 45.455 3.91 0.00 39.76 3.28
2616 2723 1.512310 GTTGACGACGAGCTCGAGG 60.512 63.158 40.58 30.50 46.14 4.63
2628 2735 2.341318 TGGTGACATCGTAGTTGACG 57.659 50.000 0.00 0.00 44.95 4.35
2634 2741 5.356426 TCATAATGGTTGGTGACATCGTAG 58.644 41.667 0.00 0.00 42.32 3.51
2667 2774 3.124921 GTCCGCCCAACACGATGG 61.125 66.667 0.00 0.00 40.35 3.51
2865 2972 2.120737 AACCACTTCCACCGTAGCCC 62.121 60.000 0.00 0.00 0.00 5.19
2970 3077 1.519455 GTGGTCTGAATCCGGCTCG 60.519 63.158 0.00 0.00 0.00 5.03
2981 3088 1.384525 CTCCTCCTCGTAGTGGTCTG 58.615 60.000 0.00 0.00 42.59 3.51
3081 3188 2.187163 GCCGGTAGAGGGAGCAAC 59.813 66.667 1.90 0.00 0.00 4.17
3102 3209 1.450312 GATGTCCTGCTGGTTCGGG 60.450 63.158 9.73 0.00 34.23 5.14
3103 3210 1.811266 CGATGTCCTGCTGGTTCGG 60.811 63.158 9.73 0.26 32.27 4.30
3107 3214 4.457496 CGGCGATGTCCTGCTGGT 62.457 66.667 0.00 0.00 33.80 4.00
3126 3233 2.356553 TGTACGTTCACCGCAGCC 60.357 61.111 0.00 0.00 41.42 4.85
3132 3239 4.959446 ACGCTCTGTACGTTCACC 57.041 55.556 0.00 0.00 41.93 4.02
3141 3248 2.259818 CTCGCCAGAACGCTCTGT 59.740 61.111 14.40 0.00 46.71 3.41
3156 3263 2.280457 GCCTGCGCCTGTATCCTC 60.280 66.667 4.18 0.00 0.00 3.71
3360 3467 2.042741 TCGTTGGGGCCCTCGATA 60.043 61.111 29.05 15.39 0.00 2.92
3396 3503 1.155042 CACTCTTCAGCTGTGCCTTC 58.845 55.000 14.67 0.00 0.00 3.46
3491 3604 4.488879 CTTTGCCAAGCAGGAGTAAATTC 58.511 43.478 0.00 0.00 40.61 2.17
3496 3609 0.771127 ACCTTTGCCAAGCAGGAGTA 59.229 50.000 2.18 0.00 40.61 2.59
3522 3635 9.853555 CACAAGCAACCAATATTGTTCTAAATA 57.146 29.630 14.25 0.00 33.76 1.40
3528 3641 5.288804 ACACACAAGCAACCAATATTGTTC 58.711 37.500 14.25 0.91 33.76 3.18
3536 3649 2.293122 GCATCTACACACAAGCAACCAA 59.707 45.455 0.00 0.00 0.00 3.67
3540 3653 2.162319 TCGCATCTACACACAAGCAA 57.838 45.000 0.00 0.00 0.00 3.91
3903 4021 7.466746 TTTAATAGCTTCCAAAAGTGCAGAT 57.533 32.000 0.00 0.00 34.79 2.90
4166 4308 2.880879 GCTCATCAACTCGCGCGA 60.881 61.111 32.60 32.60 0.00 5.87
4233 4377 1.267121 TGTGAACAGAGGGAGTAGCC 58.733 55.000 0.00 0.00 0.00 3.93
4277 4421 3.177487 GGGTTCGTCGATGAAGAGTAAC 58.823 50.000 20.16 8.21 0.00 2.50
4281 4425 1.472878 TCTGGGTTCGTCGATGAAGAG 59.527 52.381 20.16 15.31 0.00 2.85
4282 4426 1.201647 GTCTGGGTTCGTCGATGAAGA 59.798 52.381 20.16 11.12 0.00 2.87
4283 4427 1.630148 GTCTGGGTTCGTCGATGAAG 58.370 55.000 20.16 8.88 0.00 3.02
4284 4428 0.109458 CGTCTGGGTTCGTCGATGAA 60.109 55.000 16.03 16.03 0.00 2.57
4285 4429 1.504900 CGTCTGGGTTCGTCGATGA 59.495 57.895 2.39 2.39 0.00 2.92
4286 4430 2.158959 GCGTCTGGGTTCGTCGATG 61.159 63.158 0.00 0.00 0.00 3.84
4287 4431 2.181021 GCGTCTGGGTTCGTCGAT 59.819 61.111 0.00 0.00 0.00 3.59
4288 4432 3.289062 TGCGTCTGGGTTCGTCGA 61.289 61.111 0.00 0.00 0.00 4.20
4289 4433 3.103911 GTGCGTCTGGGTTCGTCG 61.104 66.667 0.00 0.00 0.00 5.12
4290 4434 1.733399 GAGTGCGTCTGGGTTCGTC 60.733 63.158 0.00 0.00 0.00 4.20
4291 4435 2.143594 GAGAGTGCGTCTGGGTTCGT 62.144 60.000 0.00 0.00 34.71 3.85
4292 4436 1.444553 GAGAGTGCGTCTGGGTTCG 60.445 63.158 0.00 0.00 34.71 3.95
4293 4437 0.389166 CAGAGAGTGCGTCTGGGTTC 60.389 60.000 0.00 0.00 38.24 3.62
4294 4438 1.668294 CAGAGAGTGCGTCTGGGTT 59.332 57.895 0.00 0.00 38.24 4.11
4295 4439 3.371021 CAGAGAGTGCGTCTGGGT 58.629 61.111 0.00 0.00 38.24 4.51
4298 4442 2.125753 GCCCAGAGAGTGCGTCTG 60.126 66.667 0.00 0.00 41.08 3.51
4299 4443 2.283532 AGCCCAGAGAGTGCGTCT 60.284 61.111 0.00 0.00 38.71 4.18
4300 4444 2.125753 CAGCCCAGAGAGTGCGTC 60.126 66.667 0.00 0.00 0.00 5.19
4301 4445 2.164865 CTTCAGCCCAGAGAGTGCGT 62.165 60.000 0.00 0.00 0.00 5.24
4302 4446 1.447489 CTTCAGCCCAGAGAGTGCG 60.447 63.158 0.00 0.00 0.00 5.34
4303 4447 1.744741 GCTTCAGCCCAGAGAGTGC 60.745 63.158 0.00 0.00 34.31 4.40
4304 4448 0.391395 CAGCTTCAGCCCAGAGAGTG 60.391 60.000 0.00 0.00 43.38 3.51
4305 4449 0.543883 TCAGCTTCAGCCCAGAGAGT 60.544 55.000 0.00 0.00 43.38 3.24
4306 4450 0.176219 CTCAGCTTCAGCCCAGAGAG 59.824 60.000 7.42 0.08 43.38 3.20
4307 4451 1.263342 CCTCAGCTTCAGCCCAGAGA 61.263 60.000 12.60 0.00 43.38 3.10
4308 4452 1.221293 CCTCAGCTTCAGCCCAGAG 59.779 63.158 0.00 1.30 43.38 3.35
4309 4453 2.296365 CCCTCAGCTTCAGCCCAGA 61.296 63.158 0.00 0.00 43.38 3.86
4310 4454 2.271497 CCCTCAGCTTCAGCCCAG 59.729 66.667 0.00 0.00 43.38 4.45
4311 4455 2.203983 TCCCTCAGCTTCAGCCCA 60.204 61.111 0.00 0.00 43.38 5.36
4312 4456 2.270527 GTCCCTCAGCTTCAGCCC 59.729 66.667 0.00 0.00 43.38 5.19
4313 4457 2.125350 CGTCCCTCAGCTTCAGCC 60.125 66.667 0.00 0.00 43.38 4.85
4314 4458 2.125350 CCGTCCCTCAGCTTCAGC 60.125 66.667 0.00 0.00 42.49 4.26
4315 4459 2.125350 GCCGTCCCTCAGCTTCAG 60.125 66.667 0.00 0.00 0.00 3.02
4316 4460 4.069232 CGCCGTCCCTCAGCTTCA 62.069 66.667 0.00 0.00 0.00 3.02
4317 4461 4.821589 CCGCCGTCCCTCAGCTTC 62.822 72.222 0.00 0.00 0.00 3.86
4355 4499 3.138930 TATCAGAGAGCGGTGGCGC 62.139 63.158 0.00 0.00 46.35 6.53
4356 4500 1.299468 GTATCAGAGAGCGGTGGCG 60.299 63.158 0.00 0.00 46.35 5.69
4357 4501 1.068250 GGTATCAGAGAGCGGTGGC 59.932 63.158 0.00 0.00 40.37 5.01
4358 4502 1.742768 GGGTATCAGAGAGCGGTGG 59.257 63.158 0.00 0.00 0.00 4.61
4359 4503 1.043116 TGGGGTATCAGAGAGCGGTG 61.043 60.000 0.00 0.00 0.00 4.94
4360 4504 0.105453 ATGGGGTATCAGAGAGCGGT 60.105 55.000 0.00 0.00 0.00 5.68
4361 4505 0.605589 GATGGGGTATCAGAGAGCGG 59.394 60.000 0.00 0.00 35.78 5.52
4362 4506 0.242286 CGATGGGGTATCAGAGAGCG 59.758 60.000 0.00 0.00 35.43 5.03
4363 4507 1.621992 TCGATGGGGTATCAGAGAGC 58.378 55.000 0.00 0.00 35.43 4.09
4364 4508 6.238511 CGTAATATCGATGGGGTATCAGAGAG 60.239 46.154 8.54 0.00 35.43 3.20
4365 4509 5.589050 CGTAATATCGATGGGGTATCAGAGA 59.411 44.000 8.54 0.00 35.43 3.10
4366 4510 5.221067 CCGTAATATCGATGGGGTATCAGAG 60.221 48.000 8.54 0.00 35.43 3.35
4367 4511 4.643334 CCGTAATATCGATGGGGTATCAGA 59.357 45.833 8.54 0.00 35.43 3.27
4368 4512 4.401519 ACCGTAATATCGATGGGGTATCAG 59.598 45.833 8.54 0.00 35.43 2.90
4369 4513 4.346730 ACCGTAATATCGATGGGGTATCA 58.653 43.478 8.54 0.00 35.43 2.15
4370 4514 4.643784 AGACCGTAATATCGATGGGGTATC 59.356 45.833 8.54 0.00 0.00 2.24
4371 4515 4.607239 AGACCGTAATATCGATGGGGTAT 58.393 43.478 8.54 2.59 0.00 2.73
4372 4516 4.038271 AGACCGTAATATCGATGGGGTA 57.962 45.455 8.54 0.00 0.00 3.69
4373 4517 2.885616 AGACCGTAATATCGATGGGGT 58.114 47.619 8.54 7.70 0.00 4.95
4374 4518 3.585862 CAAGACCGTAATATCGATGGGG 58.414 50.000 8.54 4.46 0.00 4.96
4375 4519 3.585862 CCAAGACCGTAATATCGATGGG 58.414 50.000 8.54 4.11 0.00 4.00
4376 4520 2.993899 GCCAAGACCGTAATATCGATGG 59.006 50.000 8.54 2.31 0.00 3.51
4377 4521 2.661675 CGCCAAGACCGTAATATCGATG 59.338 50.000 8.54 0.00 0.00 3.84
4378 4522 2.555325 TCGCCAAGACCGTAATATCGAT 59.445 45.455 2.16 2.16 0.00 3.59
4379 4523 1.948834 TCGCCAAGACCGTAATATCGA 59.051 47.619 0.00 0.00 0.00 3.59
4380 4524 2.410785 TCGCCAAGACCGTAATATCG 57.589 50.000 0.00 0.00 0.00 2.92
4381 4525 5.467705 AGTATTCGCCAAGACCGTAATATC 58.532 41.667 0.00 0.00 0.00 1.63
4382 4526 5.464030 AGTATTCGCCAAGACCGTAATAT 57.536 39.130 0.00 0.00 0.00 1.28
4383 4527 4.924305 AGTATTCGCCAAGACCGTAATA 57.076 40.909 0.00 0.00 0.00 0.98
4384 4528 3.814005 AGTATTCGCCAAGACCGTAAT 57.186 42.857 0.00 0.00 0.00 1.89
4385 4529 4.500205 CCATAGTATTCGCCAAGACCGTAA 60.500 45.833 0.00 0.00 0.00 3.18
4386 4530 3.005050 CCATAGTATTCGCCAAGACCGTA 59.995 47.826 0.00 0.00 0.00 4.02
4387 4531 2.223971 CCATAGTATTCGCCAAGACCGT 60.224 50.000 0.00 0.00 0.00 4.83
4388 4532 2.223971 ACCATAGTATTCGCCAAGACCG 60.224 50.000 0.00 0.00 0.00 4.79
4389 4533 3.131396 CACCATAGTATTCGCCAAGACC 58.869 50.000 0.00 0.00 0.00 3.85
4390 4534 3.131396 CCACCATAGTATTCGCCAAGAC 58.869 50.000 0.00 0.00 0.00 3.01
4391 4535 3.035363 TCCACCATAGTATTCGCCAAGA 58.965 45.455 0.00 0.00 0.00 3.02
4392 4536 3.131396 GTCCACCATAGTATTCGCCAAG 58.869 50.000 0.00 0.00 0.00 3.61
4393 4537 2.502130 TGTCCACCATAGTATTCGCCAA 59.498 45.455 0.00 0.00 0.00 4.52
4394 4538 2.102420 CTGTCCACCATAGTATTCGCCA 59.898 50.000 0.00 0.00 0.00 5.69
4395 4539 2.102588 ACTGTCCACCATAGTATTCGCC 59.897 50.000 0.00 0.00 0.00 5.54
4396 4540 3.123804 CACTGTCCACCATAGTATTCGC 58.876 50.000 0.00 0.00 0.00 4.70
4397 4541 4.112634 CACACTGTCCACCATAGTATTCG 58.887 47.826 0.00 0.00 0.00 3.34
4398 4542 4.442706 CCACACTGTCCACCATAGTATTC 58.557 47.826 0.00 0.00 0.00 1.75
4399 4543 3.370527 GCCACACTGTCCACCATAGTATT 60.371 47.826 0.00 0.00 0.00 1.89
4400 4544 2.170607 GCCACACTGTCCACCATAGTAT 59.829 50.000 0.00 0.00 0.00 2.12
4401 4545 1.553248 GCCACACTGTCCACCATAGTA 59.447 52.381 0.00 0.00 0.00 1.82
4402 4546 0.324943 GCCACACTGTCCACCATAGT 59.675 55.000 0.00 0.00 0.00 2.12
4403 4547 0.740868 CGCCACACTGTCCACCATAG 60.741 60.000 0.00 0.00 0.00 2.23
4404 4548 1.295101 CGCCACACTGTCCACCATA 59.705 57.895 0.00 0.00 0.00 2.74
4405 4549 2.032528 CGCCACACTGTCCACCAT 59.967 61.111 0.00 0.00 0.00 3.55
4406 4550 4.927782 GCGCCACACTGTCCACCA 62.928 66.667 0.00 0.00 0.00 4.17
4411 4555 4.760047 ATCCGGCGCCACACTGTC 62.760 66.667 28.98 0.00 0.00 3.51
4454 4598 4.181010 CAGTGGGCGGGGATGGAG 62.181 72.222 0.00 0.00 0.00 3.86
4457 4601 4.802051 CACCAGTGGGCGGGGATG 62.802 72.222 15.21 0.00 37.90 3.51
4460 4604 4.802051 CATCACCAGTGGGCGGGG 62.802 72.222 15.21 0.00 37.90 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.