AutoCloner

Multiple sequence alignment - TraesCS2D01G149200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2D01G149200	chr2D	100.000	3104	0	0	1	3104	90524147	90521044	0.000000e+00	5733.0
1	TraesCS2D01G149200	chr2D	91.883	308	14	6	2543	2844	90716958	90716656	1.330000e-113	420.0
2	TraesCS2D01G149200	chr2D	96.847	222	7	0	1	222	542239078	542238857	3.780000e-99	372.0
3	TraesCS2D01G149200	chr2D	87.952	249	10	6	2847	3090	90716553	90716320	3.050000e-70	276.0
4	TraesCS2D01G149200	chr2A	94.804	2367	79	27	504	2844	90429409	90427061	0.000000e+00	3650.0
5	TraesCS2D01G149200	chr2A	92.182	307	16	4	2543	2844	90525538	90525235	7.950000e-116	427.0
6	TraesCS2D01G149200	chr2A	94.779	249	7	4	2847	3090	90524892	90524645	1.750000e-102	383.0
7	TraesCS2D01G149200	chr2A	92.369	249	12	4	2847	3090	90426949	90426703	6.370000e-92	348.0
8	TraesCS2D01G149200	chr2A	86.441	118	16	0	389	506	666028194	666028311	2.510000e-26	130.0
9	TraesCS2D01G149200	chr2A	95.556	45	1	1	2475	2519	171604563	171604520	1.540000e-08	71.3
10	TraesCS2D01G149200	chr2B	95.986	1943	47	9	930	2843	143282089	143280149	0.000000e+00	3127.0
11	TraesCS2D01G149200	chr2B	76.022	1272	197	74	1037	2259	143483953	143485165	7.520000e-156	560.0
12	TraesCS2D01G149200	chr2B	94.094	254	12	3	2543	2794	143776867	143776615	1.750000e-102	383.0
13	TraesCS2D01G149200	chr2B	96.889	225	3	1	2870	3090	143280040	143279816	1.050000e-99	374.0
14	TraesCS2D01G149200	chr2B	95.000	220	7	1	717	932	143282365	143282146	2.960000e-90	342.0
15	TraesCS2D01G149200	chr2B	89.407	236	5	6	2860	3090	143776351	143776131	2.360000e-71	279.0
16	TraesCS2D01G149200	chr2B	88.725	204	7	8	505	704	143282538	143282347	5.170000e-58	235.0
17	TraesCS2D01G149200	chr2B	88.983	118	12	1	389	506	614331722	614331838	8.970000e-31	145.0
18	TraesCS2D01G149200	chr2B	88.983	118	12	1	389	506	614435129	614435245	8.970000e-31	145.0
19	TraesCS2D01G149200	chr2B	89.706	68	5	2	438	504	52221597	52221531	5.520000e-13	86.1
20	TraesCS2D01G149200	chr2B	79.661	118	18	6	390	504	52514055	52514169	2.570000e-11	80.5
21	TraesCS2D01G149200	chr7A	97.137	943	18	4	1642	2577	570183066	570182126	0.000000e+00	1583.0
22	TraesCS2D01G149200	chr7A	98.246	114	2	0	2610	2723	570181790	570181677	1.890000e-47	200.0
23	TraesCS2D01G149200	chr7D	96.396	222	8	0	1	222	532022372	532022593	1.760000e-97	366.0
24	TraesCS2D01G149200	chr7D	72.337	723	149	37	1050	1747	477406437	477405741	2.460000e-41	180.0
25	TraesCS2D01G149200	chrUn	96.396	222	6	2	1	222	348953047	348952828	6.330000e-97	364.0
26	TraesCS2D01G149200	chrUn	96.396	222	6	2	1	222	348973882	348973663	6.330000e-97	364.0
27	TraesCS2D01G149200	chr6D	96.396	222	7	1	1	222	33423240	33423460	6.330000e-97	364.0
28	TraesCS2D01G149200	chr5D	96.396	222	7	1	1	222	94335449	94335669	6.330000e-97	364.0
29	TraesCS2D01G149200	chr5D	95.745	47	2	0	2473	2519	26619056	26619102	3.320000e-10	76.8
30	TraesCS2D01G149200	chr3D	96.396	222	6	2	1	222	596410136	596409917	6.330000e-97	364.0
31	TraesCS2D01G149200	chr3D	95.946	222	8	1	1	222	7650880	7651100	2.940000e-95	359.0
32	TraesCS2D01G149200	chr3D	97.778	45	1	0	2475	2519	277766415	277766371	9.230000e-11	78.7
33	TraesCS2D01G149200	chr1D	95.946	222	8	1	1	222	429806287	429806067	2.940000e-95	359.0
34	TraesCS2D01G149200	chr6B	76.320	701	128	26	1044	1725	718370281	718370962	1.070000e-89	340.0
35	TraesCS2D01G149200	chr6B	77.841	352	46	23	1938	2272	718371226	718371562	4.090000e-44	189.0
36	TraesCS2D01G149200	chr6B	83.851	161	22	4	346	504	228233869	228234027	1.930000e-32	150.0
37	TraesCS2D01G149200	chr6B	87.500	72	8	1	434	504	103664785	103664714	7.130000e-12	82.4
38	TraesCS2D01G149200	chr4D	72.905	716	158	26	1050	1747	331638606	331637909	6.740000e-52	215.0
39	TraesCS2D01G149200	chr4D	71.845	721	150	31	1049	1747	330962131	330962820	1.150000e-34	158.0
40	TraesCS2D01G149200	chr4D	95.918	49	2	0	2471	2519	464509056	464509104	2.570000e-11	80.5
41	TraesCS2D01G149200	chr4B	72.765	716	156	28	1050	1747	409742333	409743027	4.060000e-49	206.0
42	TraesCS2D01G149200	chr7B	81.328	241	43	2	1519	1758	424537164	424537403	8.780000e-46	195.0
43	TraesCS2D01G149200	chr7B	77.037	270	48	10	1175	1437	399174192	399173930	3.230000e-30	143.0
44	TraesCS2D01G149200	chr3A	84.906	159	22	2	1186	1343	480099065	480098908	3.200000e-35	159.0
45	TraesCS2D01G149200	chr3A	80.296	203	22	11	1955	2153	480091348	480091160	1.500000e-28	137.0
46	TraesCS2D01G149200	chr3A	97.778	45	1	0	2475	2519	399214230	399214274	9.230000e-11	78.7
47	TraesCS2D01G149200	chr6A	86.301	73	8	2	434	504	53504400	53504472	9.230000e-11	78.7
48	TraesCS2D01G149200	chr1A	97.778	45	1	0	2475	2519	307700438	307700394	9.230000e-11	78.7

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2D01G149200	chr2D	90521044	90524147	3103	True	5733.0	5733	100.0000	1	3104	1	chr2D.!!$R1	3103
1	TraesCS2D01G149200	chr2D	90716320	90716958	638	True	348.0	420	89.9175	2543	3090	2	chr2D.!!$R3	547
2	TraesCS2D01G149200	chr2A	90426703	90429409	2706	True	1999.0	3650	93.5865	504	3090	2	chr2A.!!$R2	2586
3	TraesCS2D01G149200	chr2A	90524645	90525538	893	True	405.0	427	93.4805	2543	3090	2	chr2A.!!$R3	547
4	TraesCS2D01G149200	chr2B	143279816	143282538	2722	True	1019.5	3127	94.1500	505	3090	4	chr2B.!!$R2	2585
5	TraesCS2D01G149200	chr2B	143483953	143485165	1212	False	560.0	560	76.0220	1037	2259	1	chr2B.!!$F2	1222
6	TraesCS2D01G149200	chr2B	143776131	143776867	736	True	331.0	383	91.7505	2543	3090	2	chr2B.!!$R3	547
7	TraesCS2D01G149200	chr7A	570181677	570183066	1389	True	891.5	1583	97.6915	1642	2723	2	chr7A.!!$R1	1081
8	TraesCS2D01G149200	chr6B	718370281	718371562	1281	False	264.5	340	77.0805	1044	2272	2	chr6B.!!$F2	1228
9	TraesCS2D01G149200	chr4D	331637909	331638606	697	True	215.0	215	72.9050	1050	1747	1	chr4D.!!$R1	697
10	TraesCS2D01G149200	chr4B	409742333	409743027	694	False	206.0	206	72.7650	1050	1747	1	chr4B.!!$F1	697

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Hairpin	End Stability	Orientation
51	52	0.033894	ACTGGTCCCGGTTTGTGTTT	60.034	50.0	30.14	2.83	F
163	164	0.034574	CCATTGGTCCCGGTTCATGA	60.035	55.0	0.00	3.07	F
166	167	0.036164	TTGGTCCCGGTTCATGAGTG	59.964	55.0	0.00	3.51	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1925	2112	1.561542	CAGGTAGGCTCAAACCAGGAT	59.438	52.381	7.64	0.00	38.30	3.24	R
2018	2247	1.811359	AGTACTGCGAGTGACAGGTAC	59.189	52.381	0.00	0.00	39.55	3.34	R
2368	2629	6.853279	AACAGATTAAAACGATGCATTTCG	57.147	33.333	8.13	8.13	44.56	3.46	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	4.657952	GGACTAATGGTGGTGGGC	57.342	61.111	0.00	0.00	0.00	5.36
18	19	1.076995	GGACTAATGGTGGTGGGCC	60.077	63.158	0.00	0.00	0.00	5.80
19	20	1.688811	GACTAATGGTGGTGGGCCA	59.311	57.895	0.00	0.00	43.73	5.36
27	28	3.970410	TGGTGGGCCAGGAGCAAG	61.970	66.667	6.40	0.00	46.50	4.01
28	29	4.748144	GGTGGGCCAGGAGCAAGG	62.748	72.222	6.40	0.00	46.50	3.61
34	35	3.655211	CCAGGAGCAAGGCCCACT	61.655	66.667	0.00	0.00	0.00	4.00
35	36	2.360852	CAGGAGCAAGGCCCACTG	60.361	66.667	0.00	0.00	0.00	3.66
36	37	3.655211	AGGAGCAAGGCCCACTGG	61.655	66.667	0.00	0.00	0.00	4.00
37	38	3.971702	GGAGCAAGGCCCACTGGT	61.972	66.667	0.00	0.00	0.00	4.00
38	39	2.360475	GAGCAAGGCCCACTGGTC	60.360	66.667	12.04	12.04	36.05	4.02
39	40	3.927481	GAGCAAGGCCCACTGGTCC	62.927	68.421	15.14	0.00	36.69	4.46
41	42	4.722700	CAAGGCCCACTGGTCCCG	62.723	72.222	0.00	0.00	36.69	5.14
45	46	4.280019	GCCCACTGGTCCCGGTTT	62.280	66.667	0.00	0.00	32.44	3.27
46	47	2.282180	CCCACTGGTCCCGGTTTG	60.282	66.667	0.00	0.00	32.44	2.93
47	48	2.513895	CCACTGGTCCCGGTTTGT	59.486	61.111	0.00	0.00	32.44	2.83
48	49	1.896660	CCACTGGTCCCGGTTTGTG	60.897	63.158	0.00	2.06	32.44	3.33
49	50	1.153046	CACTGGTCCCGGTTTGTGT	60.153	57.895	0.00	0.00	32.44	3.72
50	51	0.750182	CACTGGTCCCGGTTTGTGTT	60.750	55.000	0.00	0.00	32.44	3.32
51	52	0.033894	ACTGGTCCCGGTTTGTGTTT	60.034	50.000	0.00	0.00	30.14	2.83
52	53	0.383949	CTGGTCCCGGTTTGTGTTTG	59.616	55.000	0.00	0.00	0.00	2.93
53	54	1.038130	TGGTCCCGGTTTGTGTTTGG	61.038	55.000	0.00	0.00	0.00	3.28
54	55	0.752376	GGTCCCGGTTTGTGTTTGGA	60.752	55.000	0.00	0.00	0.00	3.53
55	56	1.104630	GTCCCGGTTTGTGTTTGGAA	58.895	50.000	0.00	0.00	0.00	3.53
56	57	1.104630	TCCCGGTTTGTGTTTGGAAC	58.895	50.000	0.00	0.00	0.00	3.62
57	58	0.103390	CCCGGTTTGTGTTTGGAACC	59.897	55.000	0.00	0.00	39.50	3.62
59	60	3.652292	GGTTTGTGTTTGGAACCGG	57.348	52.632	0.00	0.00	34.13	5.28
60	61	0.103390	GGTTTGTGTTTGGAACCGGG	59.897	55.000	6.32	0.00	34.13	5.73
61	62	1.104630	GTTTGTGTTTGGAACCGGGA	58.895	50.000	6.32	0.00	0.00	5.14
62	63	1.104630	TTTGTGTTTGGAACCGGGAC	58.895	50.000	6.32	0.00	0.00	4.46
63	64	0.752376	TTGTGTTTGGAACCGGGACC	60.752	55.000	6.32	9.52	0.00	4.46
64	65	1.152922	GTGTTTGGAACCGGGACCA	60.153	57.895	16.12	16.12	0.00	4.02
65	66	0.752376	GTGTTTGGAACCGGGACCAA	60.752	55.000	24.08	24.08	43.22	3.67
66	67	0.186386	TGTTTGGAACCGGGACCAAT	59.814	50.000	26.86	0.00	44.10	3.16
67	68	0.601057	GTTTGGAACCGGGACCAATG	59.399	55.000	26.86	0.00	44.10	2.82
68	69	0.540830	TTTGGAACCGGGACCAATGG	60.541	55.000	26.86	0.00	44.10	3.16
69	70	1.721093	TTGGAACCGGGACCAATGGT	61.721	55.000	24.08	3.74	40.59	3.55
80	81	2.457366	ACCAATGGTCTCAGACGAAC	57.543	50.000	0.00	0.00	32.65	3.95
81	82	1.002087	ACCAATGGTCTCAGACGAACC	59.998	52.381	0.00	0.00	32.65	3.62
82	83	1.350193	CAATGGTCTCAGACGAACCG	58.650	55.000	0.00	0.00	32.65	4.44
83	84	0.246635	AATGGTCTCAGACGAACCGG	59.753	55.000	0.00	0.00	32.65	5.28
84	85	1.605058	ATGGTCTCAGACGAACCGGG	61.605	60.000	6.32	0.00	32.65	5.73
85	86	1.975407	GGTCTCAGACGAACCGGGA	60.975	63.158	6.32	0.00	32.65	5.14
86	87	1.212229	GTCTCAGACGAACCGGGAC	59.788	63.158	6.32	0.00	0.00	4.46
87	88	1.975407	TCTCAGACGAACCGGGACC	60.975	63.158	6.32	0.00	0.00	4.46
88	89	2.203523	TCAGACGAACCGGGACCA	60.204	61.111	6.32	0.00	0.00	4.02
89	90	1.812686	CTCAGACGAACCGGGACCAA	61.813	60.000	6.32	0.00	0.00	3.67
90	91	1.189524	TCAGACGAACCGGGACCAAT	61.190	55.000	6.32	0.00	0.00	3.16
91	92	1.019278	CAGACGAACCGGGACCAATG	61.019	60.000	6.32	0.00	0.00	2.82
92	93	1.743995	GACGAACCGGGACCAATGG	60.744	63.158	6.32	0.00	0.00	3.16
93	94	3.131478	CGAACCGGGACCAATGGC	61.131	66.667	6.32	0.00	0.00	4.40
94	95	2.754254	GAACCGGGACCAATGGCC	60.754	66.667	6.32	0.00	0.00	5.36
95	96	4.376170	AACCGGGACCAATGGCCC	62.376	66.667	18.15	18.15	36.26	5.80
100	101	4.506255	GGACCAATGGCCCCCGAG	62.506	72.222	0.00	0.00	0.00	4.63
101	102	4.506255	GACCAATGGCCCCCGAGG	62.506	72.222	0.00	0.00	39.47	4.63
127	128	4.802051	GCGCCCTGGCCTCATGAA	62.802	66.667	3.32	0.00	37.98	2.57
128	129	2.825836	CGCCCTGGCCTCATGAAC	60.826	66.667	3.32	0.00	37.98	3.18
129	130	2.440980	GCCCTGGCCTCATGAACC	60.441	66.667	3.32	7.38	34.56	3.62
130	131	2.124570	CCCTGGCCTCATGAACCG	60.125	66.667	3.32	5.15	0.00	4.44
131	132	2.124570	CCTGGCCTCATGAACCGG	60.125	66.667	14.01	14.01	0.00	5.28
132	133	2.124570	CTGGCCTCATGAACCGGG	60.125	66.667	6.32	5.08	0.00	5.73
133	134	2.609299	TGGCCTCATGAACCGGGA	60.609	61.111	6.32	0.00	0.00	5.14
134	135	2.124695	GGCCTCATGAACCGGGAC	60.125	66.667	6.32	0.00	0.00	4.46
135	136	2.124695	GCCTCATGAACCGGGACC	60.125	66.667	6.32	0.00	0.00	4.46
136	137	2.670148	GCCTCATGAACCGGGACCT	61.670	63.158	6.32	0.00	0.00	3.85
137	138	1.335132	GCCTCATGAACCGGGACCTA	61.335	60.000	6.32	0.00	0.00	3.08
138	139	1.424638	CCTCATGAACCGGGACCTAT	58.575	55.000	6.32	0.00	0.00	2.57
139	140	1.070758	CCTCATGAACCGGGACCTATG	59.929	57.143	6.32	3.23	0.00	2.23
140	141	0.468226	TCATGAACCGGGACCTATGC	59.532	55.000	6.32	0.00	0.00	3.14
141	142	0.535102	CATGAACCGGGACCTATGCC	60.535	60.000	6.32	0.00	0.00	4.40
142	143	1.705997	ATGAACCGGGACCTATGCCC	61.706	60.000	6.32	0.00	42.41	5.36
143	144	3.094498	AACCGGGACCTATGCCCC	61.094	66.667	6.32	0.00	42.92	5.80
158	159	3.668142	CCCCCATTGGTCCCGGTT	61.668	66.667	0.00	0.00	0.00	4.44
159	160	2.044352	CCCCATTGGTCCCGGTTC	60.044	66.667	0.00	0.00	0.00	3.62
160	161	2.760477	CCCATTGGTCCCGGTTCA	59.240	61.111	0.00	0.00	0.00	3.18
161	162	1.306296	CCCATTGGTCCCGGTTCAT	59.694	57.895	0.00	0.00	0.00	2.57
162	163	1.037030	CCCATTGGTCCCGGTTCATG	61.037	60.000	0.00	0.00	0.00	3.07
163	164	0.034574	CCATTGGTCCCGGTTCATGA	60.035	55.000	0.00	0.00	0.00	3.07
164	165	1.382522	CATTGGTCCCGGTTCATGAG	58.617	55.000	0.00	0.00	0.00	2.90
165	166	0.991920	ATTGGTCCCGGTTCATGAGT	59.008	50.000	0.00	0.00	0.00	3.41
166	167	0.036164	TTGGTCCCGGTTCATGAGTG	59.964	55.000	0.00	0.00	0.00	3.51
167	168	0.834261	TGGTCCCGGTTCATGAGTGA	60.834	55.000	0.00	0.00	0.00	3.41
168	169	0.323629	GGTCCCGGTTCATGAGTGAA	59.676	55.000	0.00	0.00	41.89	3.18
178	179	4.561500	TTCATGAGTGAACCGGGATTAA	57.438	40.909	6.32	0.00	39.36	1.40
179	180	4.771114	TCATGAGTGAACCGGGATTAAT	57.229	40.909	6.32	0.00	0.00	1.40
180	181	4.450976	TCATGAGTGAACCGGGATTAATG	58.549	43.478	6.32	0.82	0.00	1.90
181	182	3.275617	TGAGTGAACCGGGATTAATGG	57.724	47.619	6.32	0.00	0.00	3.16
182	183	2.092646	TGAGTGAACCGGGATTAATGGG	60.093	50.000	6.32	0.00	0.00	4.00
183	184	1.029681	GTGAACCGGGATTAATGGGC	58.970	55.000	6.32	0.00	0.00	5.36
184	185	0.923358	TGAACCGGGATTAATGGGCT	59.077	50.000	6.32	0.00	0.00	5.19
185	186	1.286553	TGAACCGGGATTAATGGGCTT	59.713	47.619	6.32	0.00	0.00	4.35
186	187	1.681264	GAACCGGGATTAATGGGCTTG	59.319	52.381	6.32	0.00	0.00	4.01
187	188	0.755327	ACCGGGATTAATGGGCTTGC	60.755	55.000	6.32	0.00	0.00	4.01
188	189	1.463553	CCGGGATTAATGGGCTTGCC	61.464	60.000	2.49	2.49	0.00	4.52
189	190	1.463553	CGGGATTAATGGGCTTGCCC	61.464	60.000	22.91	22.91	0.00	5.36
190	191	0.105504	GGGATTAATGGGCTTGCCCT	60.106	55.000	28.37	14.03	0.00	5.19
191	192	1.043022	GGATTAATGGGCTTGCCCTG	58.957	55.000	28.37	0.00	0.00	4.45
192	193	0.390492	GATTAATGGGCTTGCCCTGC	59.610	55.000	28.37	9.89	0.00	4.85
198	199	2.124529	GGCTTGCCCTGCCTAGAC	60.125	66.667	0.00	0.00	46.38	2.59
199	200	2.124529	GCTTGCCCTGCCTAGACC	60.125	66.667	0.00	0.00	0.00	3.85
200	201	2.971598	GCTTGCCCTGCCTAGACCA	61.972	63.158	0.00	0.00	0.00	4.02
201	202	1.685224	CTTGCCCTGCCTAGACCAA	59.315	57.895	0.00	0.00	0.00	3.67
202	203	0.038166	CTTGCCCTGCCTAGACCAAA	59.962	55.000	0.00	0.00	0.00	3.28
203	204	0.038166	TTGCCCTGCCTAGACCAAAG	59.962	55.000	0.00	0.00	0.00	2.77
204	205	1.750780	GCCCTGCCTAGACCAAAGC	60.751	63.158	0.00	0.00	0.00	3.51
205	206	1.077429	CCCTGCCTAGACCAAAGCC	60.077	63.158	0.00	0.00	0.00	4.35
206	207	1.077429	CCTGCCTAGACCAAAGCCC	60.077	63.158	0.00	0.00	0.00	5.19
207	208	1.566298	CCTGCCTAGACCAAAGCCCT	61.566	60.000	0.00	0.00	0.00	5.19
208	209	0.393537	CTGCCTAGACCAAAGCCCTG	60.394	60.000	0.00	0.00	0.00	4.45
209	210	1.133809	TGCCTAGACCAAAGCCCTGT	61.134	55.000	0.00	0.00	0.00	4.00
210	211	0.038310	GCCTAGACCAAAGCCCTGTT	59.962	55.000	0.00	0.00	0.00	3.16
211	212	1.547901	GCCTAGACCAAAGCCCTGTTT	60.548	52.381	0.00	0.00	0.00	2.83
212	213	2.876581	CCTAGACCAAAGCCCTGTTTT	58.123	47.619	0.00	0.00	0.00	2.43
213	214	2.820197	CCTAGACCAAAGCCCTGTTTTC	59.180	50.000	0.00	0.00	0.00	2.29
214	215	2.755952	AGACCAAAGCCCTGTTTTCT	57.244	45.000	0.00	0.00	0.00	2.52
215	216	3.876309	AGACCAAAGCCCTGTTTTCTA	57.124	42.857	0.00	0.00	0.00	2.10
216	217	3.487372	AGACCAAAGCCCTGTTTTCTAC	58.513	45.455	0.00	0.00	0.00	2.59
217	218	3.138468	AGACCAAAGCCCTGTTTTCTACT	59.862	43.478	0.00	0.00	0.00	2.57
218	219	4.349930	AGACCAAAGCCCTGTTTTCTACTA	59.650	41.667	0.00	0.00	0.00	1.82
219	220	4.652822	ACCAAAGCCCTGTTTTCTACTAG	58.347	43.478	0.00	0.00	0.00	2.57
220	221	4.104261	ACCAAAGCCCTGTTTTCTACTAGT	59.896	41.667	0.00	0.00	0.00	2.57
221	222	4.455877	CCAAAGCCCTGTTTTCTACTAGTG	59.544	45.833	5.39	0.00	0.00	2.74
222	223	3.983044	AGCCCTGTTTTCTACTAGTGG	57.017	47.619	5.39	1.87	0.00	4.00
223	224	2.572104	AGCCCTGTTTTCTACTAGTGGG	59.428	50.000	5.39	5.95	36.63	4.61
224	225	2.305052	GCCCTGTTTTCTACTAGTGGGT	59.695	50.000	5.39	0.00	36.00	4.51
225	226	3.868754	GCCCTGTTTTCTACTAGTGGGTG	60.869	52.174	5.39	0.00	36.00	4.61
226	227	3.307480	CCCTGTTTTCTACTAGTGGGTGG	60.307	52.174	5.39	0.20	0.00	4.61
227	228	3.335579	CTGTTTTCTACTAGTGGGTGGC	58.664	50.000	5.39	0.00	0.00	5.01
228	229	2.289195	TGTTTTCTACTAGTGGGTGGCG	60.289	50.000	5.39	0.00	0.00	5.69
229	230	0.899720	TTTCTACTAGTGGGTGGCGG	59.100	55.000	5.39	0.00	0.00	6.13
230	231	1.610554	TTCTACTAGTGGGTGGCGGC	61.611	60.000	5.39	0.00	0.00	6.53
231	232	3.426117	CTACTAGTGGGTGGCGGCG	62.426	68.421	5.39	0.51	0.00	6.46
246	247	4.329545	GCGGCTGGACTGGGTGAA	62.330	66.667	0.00	0.00	0.00	3.18
247	248	2.046892	CGGCTGGACTGGGTGAAG	60.047	66.667	0.00	0.00	0.00	3.02
248	249	2.360475	GGCTGGACTGGGTGAAGC	60.360	66.667	0.00	0.00	0.00	3.86
249	250	2.753029	GCTGGACTGGGTGAAGCT	59.247	61.111	0.00	0.00	0.00	3.74
250	251	1.553690	GGCTGGACTGGGTGAAGCTA	61.554	60.000	0.00	0.00	34.29	3.32
251	252	0.107945	GCTGGACTGGGTGAAGCTAG	60.108	60.000	0.00	0.00	0.00	3.42
252	253	0.539051	CTGGACTGGGTGAAGCTAGG	59.461	60.000	0.00	0.00	0.00	3.02
253	254	0.909610	TGGACTGGGTGAAGCTAGGG	60.910	60.000	0.00	0.00	0.00	3.53
254	255	1.627297	GGACTGGGTGAAGCTAGGGG	61.627	65.000	0.00	0.00	0.00	4.79
255	256	0.910088	GACTGGGTGAAGCTAGGGGT	60.910	60.000	0.00	0.00	0.00	4.95
256	257	1.201429	ACTGGGTGAAGCTAGGGGTG	61.201	60.000	0.00	0.00	0.00	4.61
257	258	1.915078	CTGGGTGAAGCTAGGGGTGG	61.915	65.000	0.00	0.00	0.00	4.61
258	259	2.680370	GGGTGAAGCTAGGGGTGGG	61.680	68.421	0.00	0.00	0.00	4.61
259	260	1.615424	GGTGAAGCTAGGGGTGGGA	60.615	63.158	0.00	0.00	0.00	4.37
260	261	1.205460	GGTGAAGCTAGGGGTGGGAA	61.205	60.000	0.00	0.00	0.00	3.97
261	262	0.696501	GTGAAGCTAGGGGTGGGAAA	59.303	55.000	0.00	0.00	0.00	3.13
262	263	0.991920	TGAAGCTAGGGGTGGGAAAG	59.008	55.000	0.00	0.00	0.00	2.62
263	264	0.256177	GAAGCTAGGGGTGGGAAAGG	59.744	60.000	0.00	0.00	0.00	3.11
264	265	1.214992	AAGCTAGGGGTGGGAAAGGG	61.215	60.000	0.00	0.00	0.00	3.95
265	266	1.929088	GCTAGGGGTGGGAAAGGGT	60.929	63.158	0.00	0.00	0.00	4.34
266	267	1.999346	CTAGGGGTGGGAAAGGGTG	59.001	63.158	0.00	0.00	0.00	4.61
267	268	0.549169	CTAGGGGTGGGAAAGGGTGA	60.549	60.000	0.00	0.00	0.00	4.02
268	269	0.103823	TAGGGGTGGGAAAGGGTGAA	60.104	55.000	0.00	0.00	0.00	3.18
269	270	1.076727	GGGGTGGGAAAGGGTGAAG	59.923	63.158	0.00	0.00	0.00	3.02
270	271	1.432023	GGGGTGGGAAAGGGTGAAGA	61.432	60.000	0.00	0.00	0.00	2.87
271	272	0.251209	GGGTGGGAAAGGGTGAAGAC	60.251	60.000	0.00	0.00	0.00	3.01
272	273	0.476771	GGTGGGAAAGGGTGAAGACA	59.523	55.000	0.00	0.00	0.00	3.41
273	274	1.545651	GGTGGGAAAGGGTGAAGACAG	60.546	57.143	0.00	0.00	0.00	3.51
274	275	1.420138	GTGGGAAAGGGTGAAGACAGA	59.580	52.381	0.00	0.00	0.00	3.41
275	276	1.699634	TGGGAAAGGGTGAAGACAGAG	59.300	52.381	0.00	0.00	0.00	3.35
276	277	1.978580	GGGAAAGGGTGAAGACAGAGA	59.021	52.381	0.00	0.00	0.00	3.10
277	278	2.027653	GGGAAAGGGTGAAGACAGAGAG	60.028	54.545	0.00	0.00	0.00	3.20
278	279	2.900546	GGAAAGGGTGAAGACAGAGAGA	59.099	50.000	0.00	0.00	0.00	3.10
279	280	3.056179	GGAAAGGGTGAAGACAGAGAGAG	60.056	52.174	0.00	0.00	0.00	3.20
280	281	2.230130	AGGGTGAAGACAGAGAGAGG	57.770	55.000	0.00	0.00	0.00	3.69
281	282	1.190643	GGGTGAAGACAGAGAGAGGG	58.809	60.000	0.00	0.00	0.00	4.30
282	283	0.534873	GGTGAAGACAGAGAGAGGGC	59.465	60.000	0.00	0.00	0.00	5.19
283	284	1.555967	GTGAAGACAGAGAGAGGGCT	58.444	55.000	0.00	0.00	0.00	5.19
284	285	2.621929	GGTGAAGACAGAGAGAGGGCTA	60.622	54.545	0.00	0.00	0.00	3.93
285	286	2.687935	GTGAAGACAGAGAGAGGGCTAG	59.312	54.545	0.00	0.00	0.00	3.42
286	287	2.306847	GAAGACAGAGAGAGGGCTAGG	58.693	57.143	0.00	0.00	0.00	3.02
287	288	1.304891	AGACAGAGAGAGGGCTAGGT	58.695	55.000	0.00	0.00	0.00	3.08
288	289	1.643811	AGACAGAGAGAGGGCTAGGTT	59.356	52.381	0.00	0.00	0.00	3.50
289	290	2.043801	AGACAGAGAGAGGGCTAGGTTT	59.956	50.000	0.00	0.00	0.00	3.27
290	291	2.835156	GACAGAGAGAGGGCTAGGTTTT	59.165	50.000	0.00	0.00	0.00	2.43
291	292	4.024670	GACAGAGAGAGGGCTAGGTTTTA	58.975	47.826	0.00	0.00	0.00	1.52
292	293	4.625963	ACAGAGAGAGGGCTAGGTTTTAT	58.374	43.478	0.00	0.00	0.00	1.40
293	294	5.778542	ACAGAGAGAGGGCTAGGTTTTATA	58.221	41.667	0.00	0.00	0.00	0.98
294	295	6.386284	ACAGAGAGAGGGCTAGGTTTTATAT	58.614	40.000	0.00	0.00	0.00	0.86
295	296	6.268847	ACAGAGAGAGGGCTAGGTTTTATATG	59.731	42.308	0.00	0.00	0.00	1.78
296	297	5.782845	AGAGAGAGGGCTAGGTTTTATATGG	59.217	44.000	0.00	0.00	0.00	2.74
297	298	4.287326	AGAGAGGGCTAGGTTTTATATGGC	59.713	45.833	0.00	0.00	0.00	4.40
298	299	4.243643	AGAGGGCTAGGTTTTATATGGCT	58.756	43.478	0.00	0.00	0.00	4.75
299	300	4.042187	AGAGGGCTAGGTTTTATATGGCTG	59.958	45.833	0.00	0.00	0.00	4.85
300	301	3.074538	AGGGCTAGGTTTTATATGGCTGG	59.925	47.826	0.00	0.00	0.00	4.85
301	302	3.421844	GGCTAGGTTTTATATGGCTGGG	58.578	50.000	0.00	0.00	0.00	4.45
302	303	3.181433	GGCTAGGTTTTATATGGCTGGGT	60.181	47.826	0.00	0.00	0.00	4.51
303	304	3.821033	GCTAGGTTTTATATGGCTGGGTG	59.179	47.826	0.00	0.00	0.00	4.61
304	305	4.445735	GCTAGGTTTTATATGGCTGGGTGA	60.446	45.833	0.00	0.00	0.00	4.02
305	306	3.898482	AGGTTTTATATGGCTGGGTGAC	58.102	45.455	0.00	0.00	0.00	3.67
306	307	3.268334	AGGTTTTATATGGCTGGGTGACA	59.732	43.478	0.00	0.00	38.56	3.58
308	309	4.037923	GGTTTTATATGGCTGGGTGACATG	59.962	45.833	0.00	0.00	45.61	3.21
309	310	3.507162	TTATATGGCTGGGTGACATGG	57.493	47.619	0.00	0.00	45.61	3.66
310	311	0.178981	ATATGGCTGGGTGACATGGC	60.179	55.000	0.00	0.00	45.61	4.40
311	312	2.607411	TATGGCTGGGTGACATGGCG	62.607	60.000	0.00	0.00	45.61	5.69
314	315	3.129502	CTGGGTGACATGGCGCTG	61.130	66.667	12.81	0.00	0.00	5.18
315	316	3.610619	CTGGGTGACATGGCGCTGA	62.611	63.158	12.81	0.00	0.00	4.26
316	317	2.821366	GGGTGACATGGCGCTGAG	60.821	66.667	12.81	0.00	0.00	3.35
317	318	2.046892	GGTGACATGGCGCTGAGT	60.047	61.111	12.81	2.64	0.00	3.41
318	319	1.672356	GGTGACATGGCGCTGAGTT	60.672	57.895	12.81	0.00	0.00	3.01
319	320	1.499056	GTGACATGGCGCTGAGTTG	59.501	57.895	7.64	0.54	0.00	3.16
320	321	1.672030	TGACATGGCGCTGAGTTGG	60.672	57.895	7.64	0.00	0.00	3.77
321	322	3.044059	GACATGGCGCTGAGTTGGC	62.044	63.158	7.64	0.00	0.00	4.52
332	333	2.186903	AGTTGGCCGCCGACTATG	59.813	61.111	28.25	0.00	45.65	2.23
333	334	3.573491	GTTGGCCGCCGACTATGC	61.573	66.667	21.09	0.00	35.15	3.14
341	342	4.902308	CCGACTATGCGGTCAACA	57.098	55.556	0.00	0.00	46.07	3.33
342	343	3.362581	CCGACTATGCGGTCAACAT	57.637	52.632	0.00	0.00	46.07	2.71
343	344	1.651987	CCGACTATGCGGTCAACATT	58.348	50.000	0.00	0.00	46.07	2.71
344	345	1.593006	CCGACTATGCGGTCAACATTC	59.407	52.381	0.00	0.00	46.07	2.67
345	346	1.593006	CGACTATGCGGTCAACATTCC	59.407	52.381	5.42	0.00	36.12	3.01
346	347	2.627945	GACTATGCGGTCAACATTCCA	58.372	47.619	0.00	0.00	36.35	3.53
347	348	3.006940	GACTATGCGGTCAACATTCCAA	58.993	45.455	0.00	0.00	36.35	3.53
348	349	3.417101	ACTATGCGGTCAACATTCCAAA	58.583	40.909	0.00	0.00	0.00	3.28
349	350	3.823873	ACTATGCGGTCAACATTCCAAAA	59.176	39.130	0.00	0.00	0.00	2.44
350	351	2.500509	TGCGGTCAACATTCCAAAAC	57.499	45.000	0.00	0.00	0.00	2.43
351	352	1.067821	TGCGGTCAACATTCCAAAACC	59.932	47.619	0.00	0.00	0.00	3.27
352	353	2.044888	CGGTCAACATTCCAAAACCG	57.955	50.000	0.00	0.00	42.97	4.44
353	354	1.335506	CGGTCAACATTCCAAAACCGG	60.336	52.381	0.00	0.00	44.38	5.28
354	355	1.684450	GGTCAACATTCCAAAACCGGT	59.316	47.619	0.00	0.00	0.00	5.28
355	356	2.287970	GGTCAACATTCCAAAACCGGTC	60.288	50.000	8.04	0.00	0.00	4.79
356	357	2.359531	GTCAACATTCCAAAACCGGTCA	59.640	45.455	8.04	0.00	0.00	4.02
357	358	3.024547	TCAACATTCCAAAACCGGTCAA	58.975	40.909	8.04	0.00	0.00	3.18
358	359	3.447586	TCAACATTCCAAAACCGGTCAAA	59.552	39.130	8.04	0.00	0.00	2.69
359	360	4.081642	TCAACATTCCAAAACCGGTCAAAA	60.082	37.500	8.04	0.00	0.00	2.44
360	361	3.787785	ACATTCCAAAACCGGTCAAAAC	58.212	40.909	8.04	0.00	0.00	2.43
361	362	3.195825	ACATTCCAAAACCGGTCAAAACA	59.804	39.130	8.04	0.00	0.00	2.83
362	363	3.955650	TTCCAAAACCGGTCAAAACAA	57.044	38.095	8.04	0.00	0.00	2.83
363	364	3.512033	TCCAAAACCGGTCAAAACAAG	57.488	42.857	8.04	0.00	0.00	3.16
364	365	2.166664	TCCAAAACCGGTCAAAACAAGG	59.833	45.455	8.04	1.83	0.00	3.61
365	366	2.166664	CCAAAACCGGTCAAAACAAGGA	59.833	45.455	8.04	0.00	0.00	3.36
366	367	3.181470	CCAAAACCGGTCAAAACAAGGAT	60.181	43.478	8.04	0.00	0.00	3.24
367	368	4.038162	CCAAAACCGGTCAAAACAAGGATA	59.962	41.667	8.04	0.00	0.00	2.59
368	369	5.452077	CCAAAACCGGTCAAAACAAGGATAA	60.452	40.000	8.04	0.00	0.00	1.75
369	370	5.855740	AAACCGGTCAAAACAAGGATAAA	57.144	34.783	8.04	0.00	0.00	1.40
370	371	5.855740	AACCGGTCAAAACAAGGATAAAA	57.144	34.783	8.04	0.00	0.00	1.52
371	372	5.190992	ACCGGTCAAAACAAGGATAAAAC	57.809	39.130	0.00	0.00	0.00	2.43
372	373	4.038282	ACCGGTCAAAACAAGGATAAAACC	59.962	41.667	0.00	0.00	0.00	3.27
373	374	4.038162	CCGGTCAAAACAAGGATAAAACCA	59.962	41.667	0.00	0.00	0.00	3.67
374	375	5.219633	CGGTCAAAACAAGGATAAAACCAG	58.780	41.667	0.00	0.00	0.00	4.00
375	376	4.988540	GGTCAAAACAAGGATAAAACCAGC	59.011	41.667	0.00	0.00	0.00	4.85
376	377	5.221441	GGTCAAAACAAGGATAAAACCAGCT	60.221	40.000	0.00	0.00	0.00	4.24
377	378	6.280643	GTCAAAACAAGGATAAAACCAGCTT	58.719	36.000	0.00	0.00	0.00	3.74
378	379	6.200854	GTCAAAACAAGGATAAAACCAGCTTG	59.799	38.462	0.00	0.00	0.00	4.01
379	380	6.097554	TCAAAACAAGGATAAAACCAGCTTGA	59.902	34.615	0.00	0.00	0.00	3.02
380	381	5.453567	AACAAGGATAAAACCAGCTTGAC	57.546	39.130	0.00	0.00	0.00	3.18
381	382	4.729868	ACAAGGATAAAACCAGCTTGACT	58.270	39.130	0.00	0.00	0.00	3.41
382	383	5.876357	ACAAGGATAAAACCAGCTTGACTA	58.124	37.500	0.00	0.00	0.00	2.59
383	384	5.940470	ACAAGGATAAAACCAGCTTGACTAG	59.060	40.000	0.00	0.00	0.00	2.57
384	385	6.173339	CAAGGATAAAACCAGCTTGACTAGA	58.827	40.000	0.00	0.00	0.00	2.43
385	386	5.983540	AGGATAAAACCAGCTTGACTAGAG	58.016	41.667	0.00	0.00	0.00	2.43
386	387	5.104735	AGGATAAAACCAGCTTGACTAGAGG	60.105	44.000	0.00	0.00	0.00	3.69
387	388	5.338463	GGATAAAACCAGCTTGACTAGAGGT	60.338	44.000	0.00	0.00	35.92	3.85
388	389	6.127140	GGATAAAACCAGCTTGACTAGAGGTA	60.127	42.308	0.00	0.00	34.04	3.08
389	390	4.810191	AAACCAGCTTGACTAGAGGTAG	57.190	45.455	0.00	0.00	34.04	3.18
390	391	2.741145	ACCAGCTTGACTAGAGGTAGG	58.259	52.381	0.00	0.00	33.57	3.18
391	392	2.035632	CCAGCTTGACTAGAGGTAGGG	58.964	57.143	0.00	0.00	0.00	3.53
392	393	2.624557	CCAGCTTGACTAGAGGTAGGGT	60.625	54.545	0.00	0.00	0.00	4.34
393	394	3.100671	CAGCTTGACTAGAGGTAGGGTT	58.899	50.000	0.00	0.00	0.00	4.11
394	395	3.100671	AGCTTGACTAGAGGTAGGGTTG	58.899	50.000	0.00	0.00	0.00	3.77
395	396	3.097614	GCTTGACTAGAGGTAGGGTTGA	58.902	50.000	0.00	0.00	0.00	3.18
396	397	3.707102	GCTTGACTAGAGGTAGGGTTGAT	59.293	47.826	0.00	0.00	0.00	2.57
397	398	4.162509	GCTTGACTAGAGGTAGGGTTGATT	59.837	45.833	0.00	0.00	0.00	2.57
398	399	5.682730	GCTTGACTAGAGGTAGGGTTGATTC	60.683	48.000	0.00	0.00	0.00	2.52
399	400	5.208294	TGACTAGAGGTAGGGTTGATTCT	57.792	43.478	0.00	0.00	0.00	2.40
400	401	5.590818	TGACTAGAGGTAGGGTTGATTCTT	58.409	41.667	0.00	0.00	0.00	2.52
401	402	5.422331	TGACTAGAGGTAGGGTTGATTCTTG	59.578	44.000	0.00	0.00	0.00	3.02
402	403	5.342866	ACTAGAGGTAGGGTTGATTCTTGT	58.657	41.667	0.00	0.00	0.00	3.16
403	404	4.828072	AGAGGTAGGGTTGATTCTTGTC	57.172	45.455	0.00	0.00	0.00	3.18
404	405	3.519913	AGAGGTAGGGTTGATTCTTGTCC	59.480	47.826	0.00	0.00	0.00	4.02
405	406	2.236395	AGGTAGGGTTGATTCTTGTCCG	59.764	50.000	0.00	0.00	0.00	4.79
406	407	2.629051	GTAGGGTTGATTCTTGTCCGG	58.371	52.381	0.00	0.00	0.00	5.14
407	408	1.064825	AGGGTTGATTCTTGTCCGGT	58.935	50.000	0.00	0.00	0.00	5.28
408	409	1.423921	AGGGTTGATTCTTGTCCGGTT	59.576	47.619	0.00	0.00	0.00	4.44
409	410	2.158519	AGGGTTGATTCTTGTCCGGTTT	60.159	45.455	0.00	0.00	0.00	3.27
410	411	2.626266	GGGTTGATTCTTGTCCGGTTTT	59.374	45.455	0.00	0.00	0.00	2.43
411	412	3.822167	GGGTTGATTCTTGTCCGGTTTTA	59.178	43.478	0.00	0.00	0.00	1.52
412	413	4.082949	GGGTTGATTCTTGTCCGGTTTTAG	60.083	45.833	0.00	0.00	0.00	1.85
413	414	4.758165	GGTTGATTCTTGTCCGGTTTTAGA	59.242	41.667	0.00	0.00	0.00	2.10
414	415	5.239963	GGTTGATTCTTGTCCGGTTTTAGAA	59.760	40.000	0.00	7.39	0.00	2.10
415	416	6.371389	GTTGATTCTTGTCCGGTTTTAGAAG	58.629	40.000	0.00	0.00	0.00	2.85
416	417	5.617252	TGATTCTTGTCCGGTTTTAGAAGT	58.383	37.500	0.00	0.00	0.00	3.01
417	418	6.059484	TGATTCTTGTCCGGTTTTAGAAGTT	58.941	36.000	0.00	0.00	0.00	2.66
418	419	6.544564	TGATTCTTGTCCGGTTTTAGAAGTTT	59.455	34.615	0.00	0.00	0.00	2.66
419	420	5.744666	TCTTGTCCGGTTTTAGAAGTTTG	57.255	39.130	0.00	0.00	0.00	2.93
420	421	5.430007	TCTTGTCCGGTTTTAGAAGTTTGA	58.570	37.500	0.00	0.00	0.00	2.69
421	422	5.526111	TCTTGTCCGGTTTTAGAAGTTTGAG	59.474	40.000	0.00	0.00	0.00	3.02
422	423	4.131596	TGTCCGGTTTTAGAAGTTTGAGG	58.868	43.478	0.00	0.00	0.00	3.86
423	424	4.132336	GTCCGGTTTTAGAAGTTTGAGGT	58.868	43.478	0.00	0.00	0.00	3.85
424	425	4.577693	GTCCGGTTTTAGAAGTTTGAGGTT	59.422	41.667	0.00	0.00	0.00	3.50
425	426	4.577283	TCCGGTTTTAGAAGTTTGAGGTTG	59.423	41.667	0.00	0.00	0.00	3.77
426	427	4.337274	CCGGTTTTAGAAGTTTGAGGTTGT	59.663	41.667	0.00	0.00	0.00	3.32
427	428	5.528320	CCGGTTTTAGAAGTTTGAGGTTGTA	59.472	40.000	0.00	0.00	0.00	2.41
428	429	6.038492	CCGGTTTTAGAAGTTTGAGGTTGTAA	59.962	38.462	0.00	0.00	0.00	2.41
429	430	7.415429	CCGGTTTTAGAAGTTTGAGGTTGTAAA	60.415	37.037	0.00	0.00	0.00	2.01
430	431	8.132995	CGGTTTTAGAAGTTTGAGGTTGTAAAT	58.867	33.333	0.00	0.00	0.00	1.40
431	432	9.459640	GGTTTTAGAAGTTTGAGGTTGTAAATC	57.540	33.333	0.00	0.00	0.00	2.17
434	435	9.621629	TTTAGAAGTTTGAGGTTGTAAATCAGA	57.378	29.630	0.00	0.00	0.00	3.27
435	436	7.497925	AGAAGTTTGAGGTTGTAAATCAGAC	57.502	36.000	0.00	0.00	0.00	3.51
436	437	7.054124	AGAAGTTTGAGGTTGTAAATCAGACA	58.946	34.615	0.00	0.00	32.17	3.41
437	438	6.867662	AGTTTGAGGTTGTAAATCAGACAG	57.132	37.500	0.00	0.00	32.17	3.51
438	439	6.357367	AGTTTGAGGTTGTAAATCAGACAGT	58.643	36.000	0.00	0.00	32.17	3.55
439	440	6.828785	AGTTTGAGGTTGTAAATCAGACAGTT	59.171	34.615	0.00	0.00	32.17	3.16
440	441	7.339466	AGTTTGAGGTTGTAAATCAGACAGTTT	59.661	33.333	0.00	0.00	32.17	2.66
441	442	7.639113	TTGAGGTTGTAAATCAGACAGTTTT	57.361	32.000	0.00	0.00	0.00	2.43
442	443	7.026631	TGAGGTTGTAAATCAGACAGTTTTG	57.973	36.000	0.00	0.00	0.00	2.44
443	444	6.826231	TGAGGTTGTAAATCAGACAGTTTTGA	59.174	34.615	0.00	0.00	0.00	2.69
444	445	7.338196	TGAGGTTGTAAATCAGACAGTTTTGAA	59.662	33.333	0.00	0.00	0.00	2.69
445	446	7.707104	AGGTTGTAAATCAGACAGTTTTGAAG	58.293	34.615	0.00	0.00	0.00	3.02
446	447	7.339466	AGGTTGTAAATCAGACAGTTTTGAAGT	59.661	33.333	0.00	0.00	0.00	3.01
447	448	7.973944	GGTTGTAAATCAGACAGTTTTGAAGTT	59.026	33.333	0.00	0.00	0.00	2.66
448	449	9.010366	GTTGTAAATCAGACAGTTTTGAAGTTC	57.990	33.333	0.00	0.00	0.00	3.01
449	450	8.275015	TGTAAATCAGACAGTTTTGAAGTTCA	57.725	30.769	0.08	0.08	0.00	3.18
450	451	8.397906	TGTAAATCAGACAGTTTTGAAGTTCAG	58.602	33.333	5.56	0.00	0.00	3.02
451	452	6.382869	AATCAGACAGTTTTGAAGTTCAGG	57.617	37.500	5.56	0.00	0.00	3.86
452	453	4.199310	TCAGACAGTTTTGAAGTTCAGGG	58.801	43.478	5.56	0.00	0.00	4.45
453	454	3.947834	CAGACAGTTTTGAAGTTCAGGGT	59.052	43.478	5.56	1.68	0.00	4.34
454	455	4.399303	CAGACAGTTTTGAAGTTCAGGGTT	59.601	41.667	5.56	0.00	0.00	4.11
455	456	4.399303	AGACAGTTTTGAAGTTCAGGGTTG	59.601	41.667	5.56	6.78	0.00	3.77
456	457	4.086457	ACAGTTTTGAAGTTCAGGGTTGT	58.914	39.130	5.56	7.36	0.00	3.32
457	458	5.258051	ACAGTTTTGAAGTTCAGGGTTGTA	58.742	37.500	5.56	0.00	0.00	2.41
458	459	5.891551	ACAGTTTTGAAGTTCAGGGTTGTAT	59.108	36.000	5.56	0.00	0.00	2.29
459	460	7.057894	ACAGTTTTGAAGTTCAGGGTTGTATA	58.942	34.615	5.56	0.00	0.00	1.47
460	461	7.724061	ACAGTTTTGAAGTTCAGGGTTGTATAT	59.276	33.333	5.56	0.00	0.00	0.86
461	462	8.576442	CAGTTTTGAAGTTCAGGGTTGTATATT	58.424	33.333	5.56	0.00	0.00	1.28
462	463	9.802039	AGTTTTGAAGTTCAGGGTTGTATATTA	57.198	29.630	5.56	0.00	0.00	0.98
465	466	9.444600	TTTGAAGTTCAGGGTTGTATATTAGAC	57.555	33.333	5.56	0.00	0.00	2.59
466	467	8.375493	TGAAGTTCAGGGTTGTATATTAGACT	57.625	34.615	0.08	0.00	0.00	3.24
467	468	8.822805	TGAAGTTCAGGGTTGTATATTAGACTT	58.177	33.333	0.08	0.00	0.00	3.01
468	469	9.668497	GAAGTTCAGGGTTGTATATTAGACTTT	57.332	33.333	0.00	0.00	0.00	2.66
469	470	9.449719	AAGTTCAGGGTTGTATATTAGACTTTG	57.550	33.333	0.00	0.00	0.00	2.77
470	471	8.047310	AGTTCAGGGTTGTATATTAGACTTTGG	58.953	37.037	0.00	0.00	0.00	3.28
471	472	7.504926	TCAGGGTTGTATATTAGACTTTGGT	57.495	36.000	0.00	0.00	0.00	3.67
472	473	7.335627	TCAGGGTTGTATATTAGACTTTGGTG	58.664	38.462	0.00	0.00	0.00	4.17
473	474	6.542370	CAGGGTTGTATATTAGACTTTGGTGG	59.458	42.308	0.00	0.00	0.00	4.61
474	475	6.216868	AGGGTTGTATATTAGACTTTGGTGGT	59.783	38.462	0.00	0.00	0.00	4.16
475	476	7.403813	AGGGTTGTATATTAGACTTTGGTGGTA	59.596	37.037	0.00	0.00	0.00	3.25
476	477	7.713942	GGGTTGTATATTAGACTTTGGTGGTAG	59.286	40.741	0.00	0.00	0.00	3.18
477	478	8.262933	GGTTGTATATTAGACTTTGGTGGTAGT	58.737	37.037	0.00	0.00	0.00	2.73
478	479	9.662947	GTTGTATATTAGACTTTGGTGGTAGTT	57.337	33.333	0.00	0.00	0.00	2.24
479	480	9.880157	TTGTATATTAGACTTTGGTGGTAGTTC	57.120	33.333	0.00	0.00	0.00	3.01
480	481	9.038072	TGTATATTAGACTTTGGTGGTAGTTCA	57.962	33.333	0.00	0.00	0.00	3.18
481	482	9.530633	GTATATTAGACTTTGGTGGTAGTTCAG	57.469	37.037	0.00	0.00	0.00	3.02
482	483	6.681729	ATTAGACTTTGGTGGTAGTTCAGA	57.318	37.500	0.00	0.00	0.00	3.27
483	484	4.608948	AGACTTTGGTGGTAGTTCAGAG	57.391	45.455	0.00	0.00	0.00	3.35
484	485	3.967987	AGACTTTGGTGGTAGTTCAGAGT	59.032	43.478	0.00	0.00	0.00	3.24
485	486	4.409247	AGACTTTGGTGGTAGTTCAGAGTT	59.591	41.667	0.00	0.00	0.00	3.01
486	487	4.451900	ACTTTGGTGGTAGTTCAGAGTTG	58.548	43.478	0.00	0.00	0.00	3.16
487	488	4.080526	ACTTTGGTGGTAGTTCAGAGTTGT	60.081	41.667	0.00	0.00	0.00	3.32
488	489	5.129815	ACTTTGGTGGTAGTTCAGAGTTGTA	59.870	40.000	0.00	0.00	0.00	2.41
489	490	5.617528	TTGGTGGTAGTTCAGAGTTGTAA	57.382	39.130	0.00	0.00	0.00	2.41
490	491	4.952460	TGGTGGTAGTTCAGAGTTGTAAC	58.048	43.478	0.00	0.00	0.00	2.50
491	492	4.406326	TGGTGGTAGTTCAGAGTTGTAACA	59.594	41.667	0.00	0.00	0.00	2.41
492	493	5.071250	TGGTGGTAGTTCAGAGTTGTAACAT	59.929	40.000	0.00	0.00	0.00	2.71
493	494	5.408604	GGTGGTAGTTCAGAGTTGTAACATG	59.591	44.000	0.00	0.00	0.00	3.21
494	495	6.220930	GTGGTAGTTCAGAGTTGTAACATGA	58.779	40.000	0.00	0.00	0.00	3.07
495	496	6.704493	GTGGTAGTTCAGAGTTGTAACATGAA	59.296	38.462	0.00	9.80	35.72	2.57
496	497	6.704493	TGGTAGTTCAGAGTTGTAACATGAAC	59.296	38.462	23.77	23.77	46.72	3.18
500	501	7.484035	GTTCAGAGTTGTAACATGAACTTCT	57.516	36.000	23.84	6.61	45.02	2.85
501	502	7.568433	GTTCAGAGTTGTAACATGAACTTCTC	58.432	38.462	23.84	9.11	45.02	2.87
502	503	7.055667	TCAGAGTTGTAACATGAACTTCTCT	57.944	36.000	0.00	10.94	32.47	3.10
534	535	9.573133	AATTACGATGAGCAAGGAAAAATAAAG	57.427	29.630	0.00	0.00	0.00	1.85
682	687	2.113243	AAACCCTTCGCTTCCGAGCT	62.113	55.000	0.00	0.00	46.96	4.09
684	689	1.811679	CCCTTCGCTTCCGAGCTTC	60.812	63.158	0.00	0.00	46.96	3.86
689	694	4.840005	GCTTCCGAGCTTCCCCCG	62.840	72.222	0.00	0.00	45.65	5.73
690	695	4.840005	CTTCCGAGCTTCCCCCGC	62.840	72.222	0.00	0.00	0.00	6.13
982	1055	2.593436	ACCTTGTCCGCCCGTTTG	60.593	61.111	0.00	0.00	0.00	2.93
1822	1952	2.928757	CTCTGCAAGGAGAATCTGTTCG	59.071	50.000	0.00	0.00	39.38	3.95
1925	2112	1.056660	GTCAACAAGGAGGTGAGGGA	58.943	55.000	0.00	0.00	46.66	4.20
2018	2247	0.600255	AAAGAACTGACGACTGGCGG	60.600	55.000	8.22	0.00	46.49	6.13
2573	2861	7.826744	AGAAAATTGTTGCTTTAAAAGGGAACA	59.173	29.630	9.50	9.50	40.81	3.18
2743	3319	1.211969	GCGACTCTGCGAGTGGTTA	59.788	57.895	14.47	0.00	43.53	2.85
2765	3345	0.843309	TCCTCTGATCTCTCTCGCCT	59.157	55.000	0.00	0.00	0.00	5.52
2933	3854	3.069300	ACAAGCAGCTCGATCAGATGTAT	59.931	43.478	0.00	0.77	40.98	2.29
3090	4026	5.169295	GTGTGAGGGTTTACAGTGATCTAC	58.831	45.833	0.00	0.00	0.00	2.59
3091	4027	5.047235	GTGTGAGGGTTTACAGTGATCTACT	60.047	44.000	0.00	0.00	41.36	2.57
3092	4028	5.542635	TGTGAGGGTTTACAGTGATCTACTT	59.457	40.000	0.00	0.00	37.60	2.24
3093	4029	6.042781	TGTGAGGGTTTACAGTGATCTACTTT	59.957	38.462	0.00	0.00	37.60	2.66
3094	4030	6.369065	GTGAGGGTTTACAGTGATCTACTTTG	59.631	42.308	0.00	0.00	37.60	2.77
3095	4031	5.246307	AGGGTTTACAGTGATCTACTTTGC	58.754	41.667	0.00	0.00	37.60	3.68
3096	4032	5.013183	AGGGTTTACAGTGATCTACTTTGCT	59.987	40.000	0.00	0.00	37.60	3.91
3097	4033	5.122396	GGGTTTACAGTGATCTACTTTGCTG	59.878	44.000	0.00	0.00	37.60	4.41
3098	4034	5.390991	GGTTTACAGTGATCTACTTTGCTGC	60.391	44.000	0.00	0.00	37.60	5.25
3099	4035	3.407424	ACAGTGATCTACTTTGCTGCA	57.593	42.857	0.00	0.00	37.60	4.41
3100	4036	3.743521	ACAGTGATCTACTTTGCTGCAA	58.256	40.909	11.69	11.69	37.60	4.08
3101	4037	4.330250	ACAGTGATCTACTTTGCTGCAAT	58.670	39.130	16.77	4.73	37.60	3.56
3102	4038	5.491070	ACAGTGATCTACTTTGCTGCAATA	58.509	37.500	16.77	5.73	37.60	1.90
3103	4039	5.583854	ACAGTGATCTACTTTGCTGCAATAG	59.416	40.000	16.77	15.17	37.60	1.73

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	1.076995	GGCCCACCACCATTAGTCC	60.077	63.158	0.00	0.00	35.26	3.85
1	2	0.394352	CTGGCCCACCACCATTAGTC	60.394	60.000	0.00	0.00	42.67	2.59
2	3	1.691219	CTGGCCCACCACCATTAGT	59.309	57.895	0.00	0.00	42.67	2.24
3	4	1.076777	CCTGGCCCACCACCATTAG	60.077	63.158	0.00	0.00	42.67	1.73
4	5	1.542628	TCCTGGCCCACCACCATTA	60.543	57.895	0.00	0.00	42.67	1.90
5	6	2.863484	TCCTGGCCCACCACCATT	60.863	61.111	0.00	0.00	42.67	3.16
6	7	3.341629	CTCCTGGCCCACCACCAT	61.342	66.667	0.00	0.00	42.67	3.55
9	10	4.284550	TTGCTCCTGGCCCACCAC	62.285	66.667	0.00	0.00	42.67	4.16
10	11	3.970410	CTTGCTCCTGGCCCACCA	61.970	66.667	0.00	0.00	46.51	4.17
11	12	4.748144	CCTTGCTCCTGGCCCACC	62.748	72.222	0.00	0.00	40.92	4.61
17	18	3.655211	AGTGGGCCTTGCTCCTGG	61.655	66.667	4.53	0.00	0.00	4.45
18	19	2.360852	CAGTGGGCCTTGCTCCTG	60.361	66.667	4.53	0.00	0.00	3.86
19	20	3.655211	CCAGTGGGCCTTGCTCCT	61.655	66.667	4.53	0.00	0.00	3.69
20	21	3.927481	GACCAGTGGGCCTTGCTCC	62.927	68.421	15.21	0.00	37.90	4.70
21	22	2.360475	GACCAGTGGGCCTTGCTC	60.360	66.667	15.21	0.00	37.90	4.26
28	29	4.280019	AAACCGGGACCAGTGGGC	62.280	66.667	15.21	11.26	37.90	5.36
29	30	2.282180	CAAACCGGGACCAGTGGG	60.282	66.667	15.21	0.00	41.29	4.61
30	31	1.896660	CACAAACCGGGACCAGTGG	60.897	63.158	7.91	7.91	0.00	4.00
31	32	0.750182	AACACAAACCGGGACCAGTG	60.750	55.000	6.32	9.73	0.00	3.66
32	33	0.033894	AAACACAAACCGGGACCAGT	60.034	50.000	6.32	0.00	0.00	4.00
33	34	0.383949	CAAACACAAACCGGGACCAG	59.616	55.000	6.32	0.00	0.00	4.00
34	35	1.038130	CCAAACACAAACCGGGACCA	61.038	55.000	6.32	0.00	0.00	4.02
35	36	0.752376	TCCAAACACAAACCGGGACC	60.752	55.000	6.32	0.00	0.00	4.46
36	37	1.104630	TTCCAAACACAAACCGGGAC	58.895	50.000	6.32	0.00	0.00	4.46
37	38	1.104630	GTTCCAAACACAAACCGGGA	58.895	50.000	6.32	0.00	0.00	5.14
38	39	0.103390	GGTTCCAAACACAAACCGGG	59.897	55.000	6.32	0.00	33.68	5.73
39	40	3.652292	GGTTCCAAACACAAACCGG	57.348	52.632	0.00	0.00	33.68	5.28
41	42	0.103390	CCCGGTTCCAAACACAAACC	59.897	55.000	0.00	0.00	39.25	3.27
42	43	1.104630	TCCCGGTTCCAAACACAAAC	58.895	50.000	0.00	0.00	0.00	2.93
43	44	1.104630	GTCCCGGTTCCAAACACAAA	58.895	50.000	0.00	0.00	0.00	2.83
44	45	0.752376	GGTCCCGGTTCCAAACACAA	60.752	55.000	0.00	0.00	0.00	3.33
45	46	1.152922	GGTCCCGGTTCCAAACACA	60.153	57.895	0.00	0.00	0.00	3.72
46	47	0.752376	TTGGTCCCGGTTCCAAACAC	60.752	55.000	20.46	0.00	40.21	3.32
47	48	0.186386	ATTGGTCCCGGTTCCAAACA	59.814	50.000	24.50	8.92	45.08	2.83
48	49	0.601057	CATTGGTCCCGGTTCCAAAC	59.399	55.000	24.50	4.26	45.08	2.93
49	50	0.540830	CCATTGGTCCCGGTTCCAAA	60.541	55.000	24.50	12.79	45.08	3.28
50	51	1.075836	CCATTGGTCCCGGTTCCAA	59.924	57.895	23.45	23.45	45.82	3.53
51	52	2.132089	GACCATTGGTCCCGGTTCCA	62.132	60.000	23.00	10.26	46.19	3.53
52	53	1.378119	GACCATTGGTCCCGGTTCC	60.378	63.158	23.00	2.55	46.19	3.62
53	54	4.313819	GACCATTGGTCCCGGTTC	57.686	61.111	23.00	0.00	46.19	3.62
61	62	1.002087	GGTTCGTCTGAGACCATTGGT	59.998	52.381	8.42	8.42	39.44	3.67
62	63	1.726853	GGTTCGTCTGAGACCATTGG	58.273	55.000	7.07	0.00	0.00	3.16
63	64	1.350193	CGGTTCGTCTGAGACCATTG	58.650	55.000	7.07	0.00	0.00	2.82
64	65	0.246635	CCGGTTCGTCTGAGACCATT	59.753	55.000	7.07	0.00	0.00	3.16
65	66	1.605058	CCCGGTTCGTCTGAGACCAT	61.605	60.000	7.07	0.00	0.00	3.55
66	67	2.273179	CCCGGTTCGTCTGAGACCA	61.273	63.158	7.07	0.00	0.00	4.02
67	68	1.975407	TCCCGGTTCGTCTGAGACC	60.975	63.158	7.07	0.00	0.00	3.85
68	69	1.212229	GTCCCGGTTCGTCTGAGAC	59.788	63.158	1.65	1.65	0.00	3.36
69	70	1.975407	GGTCCCGGTTCGTCTGAGA	60.975	63.158	0.00	0.00	0.00	3.27
70	71	1.812686	TTGGTCCCGGTTCGTCTGAG	61.813	60.000	0.00	0.00	0.00	3.35
71	72	1.189524	ATTGGTCCCGGTTCGTCTGA	61.190	55.000	0.00	0.00	0.00	3.27
72	73	1.019278	CATTGGTCCCGGTTCGTCTG	61.019	60.000	0.00	0.00	0.00	3.51
73	74	1.295423	CATTGGTCCCGGTTCGTCT	59.705	57.895	0.00	0.00	0.00	4.18
74	75	1.743995	CCATTGGTCCCGGTTCGTC	60.744	63.158	0.00	0.00	0.00	4.20
75	76	2.349755	CCATTGGTCCCGGTTCGT	59.650	61.111	0.00	0.00	0.00	3.85
76	77	3.131478	GCCATTGGTCCCGGTTCG	61.131	66.667	0.00	0.00	0.00	3.95
77	78	2.754254	GGCCATTGGTCCCGGTTC	60.754	66.667	0.00	0.00	0.00	3.62
78	79	4.376170	GGGCCATTGGTCCCGGTT	62.376	66.667	15.98	0.00	42.67	4.44
84	85	4.506255	CCTCGGGGGCCATTGGTC	62.506	72.222	4.39	0.54	0.00	4.02
110	111	4.802051	TTCATGAGGCCAGGGCGC	62.802	66.667	10.13	10.13	43.06	6.53
111	112	2.825836	GTTCATGAGGCCAGGGCG	60.826	66.667	5.01	0.00	43.06	6.13
112	113	2.440980	GGTTCATGAGGCCAGGGC	60.441	66.667	5.01	4.33	41.06	5.19
113	114	2.124570	CGGTTCATGAGGCCAGGG	60.125	66.667	5.01	0.00	0.00	4.45
114	115	2.124570	CCGGTTCATGAGGCCAGG	60.125	66.667	5.01	13.45	0.00	4.45
115	116	2.124570	CCCGGTTCATGAGGCCAG	60.125	66.667	5.01	6.85	0.00	4.85
116	117	2.609299	TCCCGGTTCATGAGGCCA	60.609	61.111	5.01	0.00	0.00	5.36
117	118	2.124695	GTCCCGGTTCATGAGGCC	60.125	66.667	0.00	0.00	0.00	5.19
118	119	1.335132	TAGGTCCCGGTTCATGAGGC	61.335	60.000	0.00	0.00	0.00	4.70
119	120	1.070758	CATAGGTCCCGGTTCATGAGG	59.929	57.143	0.00	0.00	0.00	3.86
120	121	1.541233	GCATAGGTCCCGGTTCATGAG	60.541	57.143	0.00	0.00	0.00	2.90
121	122	0.468226	GCATAGGTCCCGGTTCATGA	59.532	55.000	0.00	0.00	0.00	3.07
122	123	0.535102	GGCATAGGTCCCGGTTCATG	60.535	60.000	0.00	0.00	0.00	3.07
123	124	1.705997	GGGCATAGGTCCCGGTTCAT	61.706	60.000	0.00	0.00	33.43	2.57
124	125	2.372074	GGGCATAGGTCCCGGTTCA	61.372	63.158	0.00	0.00	33.43	3.18
125	126	2.509422	GGGCATAGGTCCCGGTTC	59.491	66.667	0.00	0.00	33.43	3.62
141	142	3.655350	GAACCGGGACCAATGGGGG	62.655	68.421	6.32	1.69	42.91	5.40
142	143	2.044352	GAACCGGGACCAATGGGG	60.044	66.667	6.32	0.00	44.81	4.96
143	144	1.037030	CATGAACCGGGACCAATGGG	61.037	60.000	6.32	0.00	41.29	4.00
144	145	0.034574	TCATGAACCGGGACCAATGG	60.035	55.000	6.32	0.00	0.00	3.16
145	146	1.340017	ACTCATGAACCGGGACCAATG	60.340	52.381	6.32	2.35	0.00	2.82
146	147	0.991920	ACTCATGAACCGGGACCAAT	59.008	50.000	6.32	0.00	0.00	3.16
147	148	0.036164	CACTCATGAACCGGGACCAA	59.964	55.000	6.32	0.00	0.00	3.67
148	149	0.834261	TCACTCATGAACCGGGACCA	60.834	55.000	6.32	0.00	0.00	4.02
149	150	0.323629	TTCACTCATGAACCGGGACC	59.676	55.000	6.32	0.00	40.01	4.46
150	151	3.927555	TTCACTCATGAACCGGGAC	57.072	52.632	6.32	0.00	40.01	4.46
157	158	4.561500	TTAATCCCGGTTCACTCATGAA	57.438	40.909	0.00	0.00	42.73	2.57
158	159	4.450976	CATTAATCCCGGTTCACTCATGA	58.549	43.478	0.00	0.00	0.00	3.07
159	160	3.565482	CCATTAATCCCGGTTCACTCATG	59.435	47.826	0.00	0.00	0.00	3.07
160	161	3.435026	CCCATTAATCCCGGTTCACTCAT	60.435	47.826	0.00	0.00	0.00	2.90
161	162	2.092646	CCCATTAATCCCGGTTCACTCA	60.093	50.000	0.00	0.00	0.00	3.41
162	163	2.572290	CCCATTAATCCCGGTTCACTC	58.428	52.381	0.00	0.00	0.00	3.51
163	164	1.409661	GCCCATTAATCCCGGTTCACT	60.410	52.381	0.00	0.00	0.00	3.41
164	165	1.029681	GCCCATTAATCCCGGTTCAC	58.970	55.000	0.00	0.00	0.00	3.18
165	166	0.923358	AGCCCATTAATCCCGGTTCA	59.077	50.000	0.00	0.00	0.00	3.18
166	167	1.681264	CAAGCCCATTAATCCCGGTTC	59.319	52.381	0.00	0.00	0.00	3.62
167	168	1.775385	CAAGCCCATTAATCCCGGTT	58.225	50.000	0.00	0.00	0.00	4.44
168	169	0.755327	GCAAGCCCATTAATCCCGGT	60.755	55.000	0.00	0.00	0.00	5.28
169	170	1.463553	GGCAAGCCCATTAATCCCGG	61.464	60.000	0.00	0.00	0.00	5.73
170	171	2.041153	GGCAAGCCCATTAATCCCG	58.959	57.895	0.00	0.00	0.00	5.14
182	183	2.124529	GGTCTAGGCAGGGCAAGC	60.125	66.667	0.00	0.00	0.00	4.01
183	184	0.038166	TTTGGTCTAGGCAGGGCAAG	59.962	55.000	0.00	0.00	0.00	4.01
184	185	0.038166	CTTTGGTCTAGGCAGGGCAA	59.962	55.000	0.00	0.00	0.00	4.52
185	186	1.685224	CTTTGGTCTAGGCAGGGCA	59.315	57.895	0.00	0.00	0.00	5.36
186	187	1.750780	GCTTTGGTCTAGGCAGGGC	60.751	63.158	0.00	0.00	0.00	5.19
187	188	1.077429	GGCTTTGGTCTAGGCAGGG	60.077	63.158	0.00	0.00	38.03	4.45
188	189	1.077429	GGGCTTTGGTCTAGGCAGG	60.077	63.158	0.00	0.00	39.75	4.85
189	190	0.393537	CAGGGCTTTGGTCTAGGCAG	60.394	60.000	0.00	0.00	39.75	4.85
190	191	1.133809	ACAGGGCTTTGGTCTAGGCA	61.134	55.000	0.00	0.00	39.75	4.75
191	192	0.038310	AACAGGGCTTTGGTCTAGGC	59.962	55.000	0.00	0.00	37.45	3.93
192	193	2.586648	AAACAGGGCTTTGGTCTAGG	57.413	50.000	0.00	0.00	0.00	3.02
193	194	3.756117	AGAAAACAGGGCTTTGGTCTAG	58.244	45.455	0.00	0.00	0.00	2.43
194	195	3.876309	AGAAAACAGGGCTTTGGTCTA	57.124	42.857	0.00	0.00	0.00	2.59
195	196	2.755952	AGAAAACAGGGCTTTGGTCT	57.244	45.000	0.00	0.00	0.00	3.85
196	197	3.487372	AGTAGAAAACAGGGCTTTGGTC	58.513	45.455	0.00	0.00	0.00	4.02
197	198	3.595190	AGTAGAAAACAGGGCTTTGGT	57.405	42.857	0.00	0.00	0.00	3.67
198	199	4.455877	CACTAGTAGAAAACAGGGCTTTGG	59.544	45.833	3.59	0.00	0.00	3.28
199	200	4.455877	CCACTAGTAGAAAACAGGGCTTTG	59.544	45.833	3.59	0.00	0.00	2.77
200	201	4.506802	CCCACTAGTAGAAAACAGGGCTTT	60.507	45.833	3.59	0.00	0.00	3.51
201	202	3.009143	CCCACTAGTAGAAAACAGGGCTT	59.991	47.826	3.59	0.00	0.00	4.35
202	203	2.572104	CCCACTAGTAGAAAACAGGGCT	59.428	50.000	3.59	0.00	0.00	5.19
203	204	2.305052	ACCCACTAGTAGAAAACAGGGC	59.695	50.000	3.59	0.00	38.64	5.19
204	205	3.307480	CCACCCACTAGTAGAAAACAGGG	60.307	52.174	3.59	8.70	40.88	4.45
205	206	3.868754	GCCACCCACTAGTAGAAAACAGG	60.869	52.174	3.59	0.09	0.00	4.00
206	207	3.335579	GCCACCCACTAGTAGAAAACAG	58.664	50.000	3.59	0.00	0.00	3.16
207	208	2.289195	CGCCACCCACTAGTAGAAAACA	60.289	50.000	3.59	0.00	0.00	2.83
208	209	2.344025	CGCCACCCACTAGTAGAAAAC	58.656	52.381	3.59	0.00	0.00	2.43
209	210	1.276989	CCGCCACCCACTAGTAGAAAA	59.723	52.381	3.59	0.00	0.00	2.29
210	211	0.899720	CCGCCACCCACTAGTAGAAA	59.100	55.000	3.59	0.00	0.00	2.52
211	212	1.610554	GCCGCCACCCACTAGTAGAA	61.611	60.000	3.59	0.00	0.00	2.10
212	213	2.056223	GCCGCCACCCACTAGTAGA	61.056	63.158	3.59	0.00	0.00	2.59
213	214	2.499685	GCCGCCACCCACTAGTAG	59.500	66.667	0.00	0.00	0.00	2.57
214	215	3.454573	CGCCGCCACCCACTAGTA	61.455	66.667	0.00	0.00	0.00	1.82
229	230	4.329545	TTCACCCAGTCCAGCCGC	62.330	66.667	0.00	0.00	0.00	6.53
230	231	2.046892	CTTCACCCAGTCCAGCCG	60.047	66.667	0.00	0.00	0.00	5.52
231	232	1.553690	TAGCTTCACCCAGTCCAGCC	61.554	60.000	0.00	0.00	0.00	4.85
232	233	0.107945	CTAGCTTCACCCAGTCCAGC	60.108	60.000	0.00	0.00	0.00	4.85
233	234	0.539051	CCTAGCTTCACCCAGTCCAG	59.461	60.000	0.00	0.00	0.00	3.86
234	235	0.909610	CCCTAGCTTCACCCAGTCCA	60.910	60.000	0.00	0.00	0.00	4.02
235	236	1.627297	CCCCTAGCTTCACCCAGTCC	61.627	65.000	0.00	0.00	0.00	3.85
236	237	0.910088	ACCCCTAGCTTCACCCAGTC	60.910	60.000	0.00	0.00	0.00	3.51
237	238	1.161113	ACCCCTAGCTTCACCCAGT	59.839	57.895	0.00	0.00	0.00	4.00
238	239	1.604378	CACCCCTAGCTTCACCCAG	59.396	63.158	0.00	0.00	0.00	4.45
239	240	1.923395	CCACCCCTAGCTTCACCCA	60.923	63.158	0.00	0.00	0.00	4.51
240	241	2.680370	CCCACCCCTAGCTTCACCC	61.680	68.421	0.00	0.00	0.00	4.61
241	242	1.205460	TTCCCACCCCTAGCTTCACC	61.205	60.000	0.00	0.00	0.00	4.02
242	243	0.696501	TTTCCCACCCCTAGCTTCAC	59.303	55.000	0.00	0.00	0.00	3.18
243	244	0.991920	CTTTCCCACCCCTAGCTTCA	59.008	55.000	0.00	0.00	0.00	3.02
244	245	0.256177	CCTTTCCCACCCCTAGCTTC	59.744	60.000	0.00	0.00	0.00	3.86
245	246	1.214992	CCCTTTCCCACCCCTAGCTT	61.215	60.000	0.00	0.00	0.00	3.74
246	247	1.619669	CCCTTTCCCACCCCTAGCT	60.620	63.158	0.00	0.00	0.00	3.32
247	248	1.929088	ACCCTTTCCCACCCCTAGC	60.929	63.158	0.00	0.00	0.00	3.42
248	249	0.549169	TCACCCTTTCCCACCCCTAG	60.549	60.000	0.00	0.00	0.00	3.02
249	250	0.103823	TTCACCCTTTCCCACCCCTA	60.104	55.000	0.00	0.00	0.00	3.53
250	251	1.388217	TTCACCCTTTCCCACCCCT	60.388	57.895	0.00	0.00	0.00	4.79
251	252	1.076727	CTTCACCCTTTCCCACCCC	59.923	63.158	0.00	0.00	0.00	4.95
252	253	0.251209	GTCTTCACCCTTTCCCACCC	60.251	60.000	0.00	0.00	0.00	4.61
253	254	0.476771	TGTCTTCACCCTTTCCCACC	59.523	55.000	0.00	0.00	0.00	4.61
254	255	1.420138	TCTGTCTTCACCCTTTCCCAC	59.580	52.381	0.00	0.00	0.00	4.61
255	256	1.699634	CTCTGTCTTCACCCTTTCCCA	59.300	52.381	0.00	0.00	0.00	4.37
256	257	1.978580	TCTCTGTCTTCACCCTTTCCC	59.021	52.381	0.00	0.00	0.00	3.97
257	258	2.900546	TCTCTCTGTCTTCACCCTTTCC	59.099	50.000	0.00	0.00	0.00	3.13
258	259	3.056179	CCTCTCTCTGTCTTCACCCTTTC	60.056	52.174	0.00	0.00	0.00	2.62
259	260	2.903135	CCTCTCTCTGTCTTCACCCTTT	59.097	50.000	0.00	0.00	0.00	3.11
260	261	2.534990	CCTCTCTCTGTCTTCACCCTT	58.465	52.381	0.00	0.00	0.00	3.95
261	262	1.272985	CCCTCTCTCTGTCTTCACCCT	60.273	57.143	0.00	0.00	0.00	4.34
262	263	1.190643	CCCTCTCTCTGTCTTCACCC	58.809	60.000	0.00	0.00	0.00	4.61
263	264	0.534873	GCCCTCTCTCTGTCTTCACC	59.465	60.000	0.00	0.00	0.00	4.02
264	265	1.555967	AGCCCTCTCTCTGTCTTCAC	58.444	55.000	0.00	0.00	0.00	3.18
265	266	2.357673	CCTAGCCCTCTCTCTGTCTTCA	60.358	54.545	0.00	0.00	0.00	3.02
266	267	2.306847	CCTAGCCCTCTCTCTGTCTTC	58.693	57.143	0.00	0.00	0.00	2.87
267	268	1.643811	ACCTAGCCCTCTCTCTGTCTT	59.356	52.381	0.00	0.00	0.00	3.01
268	269	1.304891	ACCTAGCCCTCTCTCTGTCT	58.695	55.000	0.00	0.00	0.00	3.41
269	270	2.153034	AACCTAGCCCTCTCTCTGTC	57.847	55.000	0.00	0.00	0.00	3.51
270	271	2.632763	AAACCTAGCCCTCTCTCTGT	57.367	50.000	0.00	0.00	0.00	3.41
271	272	6.295575	CCATATAAAACCTAGCCCTCTCTCTG	60.296	46.154	0.00	0.00	0.00	3.35
272	273	5.782845	CCATATAAAACCTAGCCCTCTCTCT	59.217	44.000	0.00	0.00	0.00	3.10
273	274	5.569832	GCCATATAAAACCTAGCCCTCTCTC	60.570	48.000	0.00	0.00	0.00	3.20
274	275	4.287326	GCCATATAAAACCTAGCCCTCTCT	59.713	45.833	0.00	0.00	0.00	3.10
275	276	4.287326	AGCCATATAAAACCTAGCCCTCTC	59.713	45.833	0.00	0.00	0.00	3.20
276	277	4.042187	CAGCCATATAAAACCTAGCCCTCT	59.958	45.833	0.00	0.00	0.00	3.69
277	278	4.327680	CAGCCATATAAAACCTAGCCCTC	58.672	47.826	0.00	0.00	0.00	4.30
278	279	3.074538	CCAGCCATATAAAACCTAGCCCT	59.925	47.826	0.00	0.00	0.00	5.19
279	280	3.421844	CCAGCCATATAAAACCTAGCCC	58.578	50.000	0.00	0.00	0.00	5.19
280	281	3.181433	ACCCAGCCATATAAAACCTAGCC	60.181	47.826	0.00	0.00	0.00	3.93
281	282	3.821033	CACCCAGCCATATAAAACCTAGC	59.179	47.826	0.00	0.00	0.00	3.42
282	283	5.063880	GTCACCCAGCCATATAAAACCTAG	58.936	45.833	0.00	0.00	0.00	3.02
283	284	4.475381	TGTCACCCAGCCATATAAAACCTA	59.525	41.667	0.00	0.00	0.00	3.08
284	285	3.268334	TGTCACCCAGCCATATAAAACCT	59.732	43.478	0.00	0.00	0.00	3.50
285	286	3.626930	TGTCACCCAGCCATATAAAACC	58.373	45.455	0.00	0.00	0.00	3.27
286	287	4.037923	CCATGTCACCCAGCCATATAAAAC	59.962	45.833	0.00	0.00	0.00	2.43
287	288	4.214310	CCATGTCACCCAGCCATATAAAA	58.786	43.478	0.00	0.00	0.00	1.52
288	289	3.831323	CCATGTCACCCAGCCATATAAA	58.169	45.455	0.00	0.00	0.00	1.40
289	290	2.488891	GCCATGTCACCCAGCCATATAA	60.489	50.000	0.00	0.00	0.00	0.98
290	291	1.073763	GCCATGTCACCCAGCCATATA	59.926	52.381	0.00	0.00	0.00	0.86
291	292	0.178981	GCCATGTCACCCAGCCATAT	60.179	55.000	0.00	0.00	0.00	1.78
292	293	1.227102	GCCATGTCACCCAGCCATA	59.773	57.895	0.00	0.00	0.00	2.74
293	294	2.043652	GCCATGTCACCCAGCCAT	60.044	61.111	0.00	0.00	0.00	4.40
294	295	4.720902	CGCCATGTCACCCAGCCA	62.721	66.667	0.00	0.00	0.00	4.75
297	298	3.129502	CAGCGCCATGTCACCCAG	61.130	66.667	2.29	0.00	0.00	4.45
298	299	3.610619	CTCAGCGCCATGTCACCCA	62.611	63.158	2.29	0.00	0.00	4.51
299	300	2.821366	CTCAGCGCCATGTCACCC	60.821	66.667	2.29	0.00	0.00	4.61
300	301	1.672356	AACTCAGCGCCATGTCACC	60.672	57.895	2.29	0.00	0.00	4.02
301	302	1.499056	CAACTCAGCGCCATGTCAC	59.501	57.895	2.29	0.00	0.00	3.67
302	303	1.672030	CCAACTCAGCGCCATGTCA	60.672	57.895	2.29	0.00	0.00	3.58
303	304	3.044059	GCCAACTCAGCGCCATGTC	62.044	63.158	2.29	0.00	0.00	3.06
304	305	3.058160	GCCAACTCAGCGCCATGT	61.058	61.111	2.29	0.00	0.00	3.21
305	306	3.818787	GGCCAACTCAGCGCCATG	61.819	66.667	2.29	0.00	42.52	3.66
312	313	2.298158	ATAGTCGGCGGCCAACTCAG	62.298	60.000	17.35	0.00	0.00	3.35
313	314	2.355986	ATAGTCGGCGGCCAACTCA	61.356	57.895	17.35	3.87	0.00	3.41
314	315	1.883084	CATAGTCGGCGGCCAACTC	60.883	63.158	17.35	3.78	0.00	3.01
315	316	2.186903	CATAGTCGGCGGCCAACT	59.813	61.111	17.97	17.97	0.00	3.16
316	317	3.573491	GCATAGTCGGCGGCCAAC	61.573	66.667	20.71	11.62	0.00	3.77
325	326	1.593006	GGAATGTTGACCGCATAGTCG	59.407	52.381	0.00	0.00	39.77	4.18
326	327	2.627945	TGGAATGTTGACCGCATAGTC	58.372	47.619	0.00	0.00	37.28	2.59
327	328	2.779755	TGGAATGTTGACCGCATAGT	57.220	45.000	0.00	0.00	0.00	2.12
328	329	4.165779	GTTTTGGAATGTTGACCGCATAG	58.834	43.478	0.00	0.00	0.00	2.23
329	330	3.057174	GGTTTTGGAATGTTGACCGCATA	60.057	43.478	0.00	0.00	0.00	3.14
330	331	2.288763	GGTTTTGGAATGTTGACCGCAT	60.289	45.455	0.00	0.00	0.00	4.73
331	332	1.067821	GGTTTTGGAATGTTGACCGCA	59.932	47.619	0.00	0.00	0.00	5.69
332	333	1.778334	GGTTTTGGAATGTTGACCGC	58.222	50.000	0.00	0.00	0.00	5.68
333	334	1.335506	CCGGTTTTGGAATGTTGACCG	60.336	52.381	5.80	5.80	46.92	4.79
334	335	1.684450	ACCGGTTTTGGAATGTTGACC	59.316	47.619	0.00	0.00	0.00	4.02
335	336	2.359531	TGACCGGTTTTGGAATGTTGAC	59.640	45.455	9.42	0.00	0.00	3.18
336	337	2.656002	TGACCGGTTTTGGAATGTTGA	58.344	42.857	9.42	0.00	0.00	3.18
337	338	3.444703	TTGACCGGTTTTGGAATGTTG	57.555	42.857	9.42	0.00	0.00	3.33
338	339	4.185394	GTTTTGACCGGTTTTGGAATGTT	58.815	39.130	9.42	0.00	0.00	2.71
339	340	3.195825	TGTTTTGACCGGTTTTGGAATGT	59.804	39.130	9.42	0.00	0.00	2.71
340	341	3.786635	TGTTTTGACCGGTTTTGGAATG	58.213	40.909	9.42	0.00	0.00	2.67
341	342	4.438148	CTTGTTTTGACCGGTTTTGGAAT	58.562	39.130	9.42	0.00	0.00	3.01
342	343	3.368531	CCTTGTTTTGACCGGTTTTGGAA	60.369	43.478	9.42	0.00	0.00	3.53
343	344	2.166664	CCTTGTTTTGACCGGTTTTGGA	59.833	45.455	9.42	0.00	0.00	3.53
344	345	2.166664	TCCTTGTTTTGACCGGTTTTGG	59.833	45.455	9.42	3.31	0.00	3.28
345	346	3.512033	TCCTTGTTTTGACCGGTTTTG	57.488	42.857	9.42	0.00	0.00	2.44
346	347	5.855740	TTATCCTTGTTTTGACCGGTTTT	57.144	34.783	9.42	0.00	0.00	2.43
347	348	5.855740	TTTATCCTTGTTTTGACCGGTTT	57.144	34.783	9.42	0.00	0.00	3.27
348	349	5.452216	GGTTTTATCCTTGTTTTGACCGGTT	60.452	40.000	9.42	0.00	0.00	4.44
349	350	4.038282	GGTTTTATCCTTGTTTTGACCGGT	59.962	41.667	6.92	6.92	0.00	5.28
350	351	4.038162	TGGTTTTATCCTTGTTTTGACCGG	59.962	41.667	0.00	0.00	0.00	5.28
351	352	5.189659	TGGTTTTATCCTTGTTTTGACCG	57.810	39.130	0.00	0.00	0.00	4.79
352	353	4.988540	GCTGGTTTTATCCTTGTTTTGACC	59.011	41.667	0.00	0.00	0.00	4.02
353	354	5.842907	AGCTGGTTTTATCCTTGTTTTGAC	58.157	37.500	0.00	0.00	0.00	3.18
354	355	6.097554	TCAAGCTGGTTTTATCCTTGTTTTGA	59.902	34.615	0.00	0.00	35.58	2.69
355	356	6.200854	GTCAAGCTGGTTTTATCCTTGTTTTG	59.799	38.462	0.00	0.00	35.58	2.44
356	357	6.098266	AGTCAAGCTGGTTTTATCCTTGTTTT	59.902	34.615	0.00	0.00	35.58	2.43
357	358	5.598417	AGTCAAGCTGGTTTTATCCTTGTTT	59.402	36.000	0.00	0.00	35.58	2.83
358	359	5.140454	AGTCAAGCTGGTTTTATCCTTGTT	58.860	37.500	0.00	0.00	35.58	2.83
359	360	4.729868	AGTCAAGCTGGTTTTATCCTTGT	58.270	39.130	0.00	0.00	35.58	3.16
360	361	6.173339	TCTAGTCAAGCTGGTTTTATCCTTG	58.827	40.000	0.00	0.00	35.44	3.61
361	362	6.374417	TCTAGTCAAGCTGGTTTTATCCTT	57.626	37.500	0.00	0.00	0.00	3.36
362	363	5.104735	CCTCTAGTCAAGCTGGTTTTATCCT	60.105	44.000	0.00	0.00	0.00	3.24
363	364	5.119694	CCTCTAGTCAAGCTGGTTTTATCC	58.880	45.833	0.00	0.00	0.00	2.59
364	365	5.735766	ACCTCTAGTCAAGCTGGTTTTATC	58.264	41.667	0.00	0.00	30.73	1.75
365	366	5.763876	ACCTCTAGTCAAGCTGGTTTTAT	57.236	39.130	0.00	0.00	30.73	1.40
366	367	5.187186	CCTACCTCTAGTCAAGCTGGTTTTA	59.813	44.000	0.00	0.00	34.81	1.52
367	368	4.020128	CCTACCTCTAGTCAAGCTGGTTTT	60.020	45.833	0.00	0.00	34.81	2.43
368	369	3.515901	CCTACCTCTAGTCAAGCTGGTTT	59.484	47.826	0.00	0.00	34.81	3.27
369	370	3.100671	CCTACCTCTAGTCAAGCTGGTT	58.899	50.000	0.00	0.00	34.81	3.67
370	371	2.624557	CCCTACCTCTAGTCAAGCTGGT	60.625	54.545	0.00	0.00	36.31	4.00
371	372	2.035632	CCCTACCTCTAGTCAAGCTGG	58.964	57.143	0.00	0.00	0.00	4.85
372	373	2.741145	ACCCTACCTCTAGTCAAGCTG	58.259	52.381	0.00	0.00	0.00	4.24
373	374	3.100671	CAACCCTACCTCTAGTCAAGCT	58.899	50.000	0.00	0.00	0.00	3.74
374	375	3.097614	TCAACCCTACCTCTAGTCAAGC	58.902	50.000	0.00	0.00	0.00	4.01
375	376	5.659079	AGAATCAACCCTACCTCTAGTCAAG	59.341	44.000	0.00	0.00	0.00	3.02
376	377	5.590818	AGAATCAACCCTACCTCTAGTCAA	58.409	41.667	0.00	0.00	0.00	3.18
377	378	5.208294	AGAATCAACCCTACCTCTAGTCA	57.792	43.478	0.00	0.00	0.00	3.41
378	379	5.422650	ACAAGAATCAACCCTACCTCTAGTC	59.577	44.000	0.00	0.00	0.00	2.59
379	380	5.342866	ACAAGAATCAACCCTACCTCTAGT	58.657	41.667	0.00	0.00	0.00	2.57
380	381	5.163395	GGACAAGAATCAACCCTACCTCTAG	60.163	48.000	0.00	0.00	0.00	2.43
381	382	4.715297	GGACAAGAATCAACCCTACCTCTA	59.285	45.833	0.00	0.00	0.00	2.43
382	383	3.519913	GGACAAGAATCAACCCTACCTCT	59.480	47.826	0.00	0.00	0.00	3.69
383	384	3.679083	CGGACAAGAATCAACCCTACCTC	60.679	52.174	0.00	0.00	0.00	3.85
384	385	2.236395	CGGACAAGAATCAACCCTACCT	59.764	50.000	0.00	0.00	0.00	3.08
385	386	2.629051	CGGACAAGAATCAACCCTACC	58.371	52.381	0.00	0.00	0.00	3.18
386	387	2.027469	ACCGGACAAGAATCAACCCTAC	60.027	50.000	9.46	0.00	0.00	3.18
387	388	2.262637	ACCGGACAAGAATCAACCCTA	58.737	47.619	9.46	0.00	0.00	3.53
388	389	1.064825	ACCGGACAAGAATCAACCCT	58.935	50.000	9.46	0.00	0.00	4.34
389	390	1.905637	AACCGGACAAGAATCAACCC	58.094	50.000	9.46	0.00	0.00	4.11
390	391	4.758165	TCTAAAACCGGACAAGAATCAACC	59.242	41.667	9.46	0.00	0.00	3.77
391	392	5.934935	TCTAAAACCGGACAAGAATCAAC	57.065	39.130	9.46	0.00	0.00	3.18
392	393	6.059484	ACTTCTAAAACCGGACAAGAATCAA	58.941	36.000	9.46	0.00	0.00	2.57
393	394	5.617252	ACTTCTAAAACCGGACAAGAATCA	58.383	37.500	9.46	0.00	0.00	2.57
394	395	6.555812	AACTTCTAAAACCGGACAAGAATC	57.444	37.500	9.46	0.00	0.00	2.52
395	396	6.544564	TCAAACTTCTAAAACCGGACAAGAAT	59.455	34.615	9.46	0.00	0.00	2.40
396	397	5.881443	TCAAACTTCTAAAACCGGACAAGAA	59.119	36.000	9.46	10.55	0.00	2.52
397	398	5.430007	TCAAACTTCTAAAACCGGACAAGA	58.570	37.500	9.46	2.05	0.00	3.02
398	399	5.277828	CCTCAAACTTCTAAAACCGGACAAG	60.278	44.000	9.46	2.88	0.00	3.16
399	400	4.577283	CCTCAAACTTCTAAAACCGGACAA	59.423	41.667	9.46	0.00	0.00	3.18
400	401	4.131596	CCTCAAACTTCTAAAACCGGACA	58.868	43.478	9.46	0.00	0.00	4.02
401	402	4.132336	ACCTCAAACTTCTAAAACCGGAC	58.868	43.478	9.46	0.00	0.00	4.79
402	403	4.426736	ACCTCAAACTTCTAAAACCGGA	57.573	40.909	9.46	0.00	0.00	5.14
403	404	4.337274	ACAACCTCAAACTTCTAAAACCGG	59.663	41.667	0.00	0.00	0.00	5.28
404	405	5.494632	ACAACCTCAAACTTCTAAAACCG	57.505	39.130	0.00	0.00	0.00	4.44
405	406	9.459640	GATTTACAACCTCAAACTTCTAAAACC	57.540	33.333	0.00	0.00	0.00	3.27
408	409	9.621629	TCTGATTTACAACCTCAAACTTCTAAA	57.378	29.630	0.00	0.00	0.00	1.85
409	410	9.052759	GTCTGATTTACAACCTCAAACTTCTAA	57.947	33.333	0.00	0.00	0.00	2.10
410	411	8.208224	TGTCTGATTTACAACCTCAAACTTCTA	58.792	33.333	0.00	0.00	0.00	2.10
411	412	7.054124	TGTCTGATTTACAACCTCAAACTTCT	58.946	34.615	0.00	0.00	0.00	2.85
412	413	7.012421	ACTGTCTGATTTACAACCTCAAACTTC	59.988	37.037	0.00	0.00	0.00	3.01
413	414	6.828785	ACTGTCTGATTTACAACCTCAAACTT	59.171	34.615	0.00	0.00	0.00	2.66
414	415	6.357367	ACTGTCTGATTTACAACCTCAAACT	58.643	36.000	0.00	0.00	0.00	2.66
415	416	6.619801	ACTGTCTGATTTACAACCTCAAAC	57.380	37.500	0.00	0.00	0.00	2.93
416	417	7.639113	AAACTGTCTGATTTACAACCTCAAA	57.361	32.000	0.00	0.00	0.00	2.69
417	418	7.338196	TCAAAACTGTCTGATTTACAACCTCAA	59.662	33.333	0.00	0.00	0.00	3.02
418	419	6.826231	TCAAAACTGTCTGATTTACAACCTCA	59.174	34.615	0.00	0.00	0.00	3.86
419	420	7.259290	TCAAAACTGTCTGATTTACAACCTC	57.741	36.000	0.00	0.00	0.00	3.85
420	421	7.339466	ACTTCAAAACTGTCTGATTTACAACCT	59.661	33.333	0.00	0.00	0.00	3.50
421	422	7.480810	ACTTCAAAACTGTCTGATTTACAACC	58.519	34.615	0.00	0.00	0.00	3.77
422	423	8.911247	AACTTCAAAACTGTCTGATTTACAAC	57.089	30.769	0.00	0.00	0.00	3.32
423	424	8.735315	TGAACTTCAAAACTGTCTGATTTACAA	58.265	29.630	0.00	0.00	0.00	2.41
424	425	8.275015	TGAACTTCAAAACTGTCTGATTTACA	57.725	30.769	0.00	0.00	0.00	2.41
425	426	7.857885	CCTGAACTTCAAAACTGTCTGATTTAC	59.142	37.037	0.00	0.00	0.00	2.01
426	427	7.013274	CCCTGAACTTCAAAACTGTCTGATTTA	59.987	37.037	0.00	0.00	0.00	1.40
427	428	6.183360	CCCTGAACTTCAAAACTGTCTGATTT	60.183	38.462	0.00	0.00	0.00	2.17
428	429	5.300286	CCCTGAACTTCAAAACTGTCTGATT	59.700	40.000	0.00	0.00	0.00	2.57
429	430	4.823989	CCCTGAACTTCAAAACTGTCTGAT	59.176	41.667	0.00	0.00	0.00	2.90
430	431	4.199310	CCCTGAACTTCAAAACTGTCTGA	58.801	43.478	0.00	0.00	0.00	3.27
431	432	3.947834	ACCCTGAACTTCAAAACTGTCTG	59.052	43.478	0.00	0.00	0.00	3.51
432	433	4.236527	ACCCTGAACTTCAAAACTGTCT	57.763	40.909	0.00	0.00	0.00	3.41
433	434	4.157840	ACAACCCTGAACTTCAAAACTGTC	59.842	41.667	0.00	0.00	0.00	3.51
434	435	4.086457	ACAACCCTGAACTTCAAAACTGT	58.914	39.130	0.00	0.00	0.00	3.55
435	436	4.718940	ACAACCCTGAACTTCAAAACTG	57.281	40.909	0.00	0.00	0.00	3.16
436	437	8.706322	AATATACAACCCTGAACTTCAAAACT	57.294	30.769	0.00	0.00	0.00	2.66
439	440	9.444600	GTCTAATATACAACCCTGAACTTCAAA	57.555	33.333	0.00	0.00	0.00	2.69
440	441	8.822805	AGTCTAATATACAACCCTGAACTTCAA	58.177	33.333	0.00	0.00	0.00	2.69
441	442	8.375493	AGTCTAATATACAACCCTGAACTTCA	57.625	34.615	0.00	0.00	0.00	3.02
442	443	9.668497	AAAGTCTAATATACAACCCTGAACTTC	57.332	33.333	0.00	0.00	0.00	3.01
443	444	9.449719	CAAAGTCTAATATACAACCCTGAACTT	57.550	33.333	0.00	0.00	0.00	2.66
444	445	8.047310	CCAAAGTCTAATATACAACCCTGAACT	58.953	37.037	0.00	0.00	0.00	3.01
445	446	7.827729	ACCAAAGTCTAATATACAACCCTGAAC	59.172	37.037	0.00	0.00	0.00	3.18
446	447	7.827236	CACCAAAGTCTAATATACAACCCTGAA	59.173	37.037	0.00	0.00	0.00	3.02
447	448	7.335627	CACCAAAGTCTAATATACAACCCTGA	58.664	38.462	0.00	0.00	0.00	3.86
448	449	6.542370	CCACCAAAGTCTAATATACAACCCTG	59.458	42.308	0.00	0.00	0.00	4.45
449	450	6.216868	ACCACCAAAGTCTAATATACAACCCT	59.783	38.462	0.00	0.00	0.00	4.34
450	451	6.420638	ACCACCAAAGTCTAATATACAACCC	58.579	40.000	0.00	0.00	0.00	4.11
451	452	8.262933	ACTACCACCAAAGTCTAATATACAACC	58.737	37.037	0.00	0.00	0.00	3.77
452	453	9.662947	AACTACCACCAAAGTCTAATATACAAC	57.337	33.333	0.00	0.00	0.00	3.32
453	454	9.880157	GAACTACCACCAAAGTCTAATATACAA	57.120	33.333	0.00	0.00	0.00	2.41
454	455	9.038072	TGAACTACCACCAAAGTCTAATATACA	57.962	33.333	0.00	0.00	0.00	2.29
455	456	9.530633	CTGAACTACCACCAAAGTCTAATATAC	57.469	37.037	0.00	0.00	0.00	1.47
456	457	9.483489	TCTGAACTACCACCAAAGTCTAATATA	57.517	33.333	0.00	0.00	0.00	0.86
457	458	8.375493	TCTGAACTACCACCAAAGTCTAATAT	57.625	34.615	0.00	0.00	0.00	1.28
458	459	7.453752	ACTCTGAACTACCACCAAAGTCTAATA	59.546	37.037	0.00	0.00	0.00	0.98
459	460	6.270231	ACTCTGAACTACCACCAAAGTCTAAT	59.730	38.462	0.00	0.00	0.00	1.73
460	461	5.601313	ACTCTGAACTACCACCAAAGTCTAA	59.399	40.000	0.00	0.00	0.00	2.10
461	462	5.145564	ACTCTGAACTACCACCAAAGTCTA	58.854	41.667	0.00	0.00	0.00	2.59
462	463	3.967987	ACTCTGAACTACCACCAAAGTCT	59.032	43.478	0.00	0.00	0.00	3.24
463	464	4.338379	ACTCTGAACTACCACCAAAGTC	57.662	45.455	0.00	0.00	0.00	3.01
464	465	4.080526	ACAACTCTGAACTACCACCAAAGT	60.081	41.667	0.00	0.00	0.00	2.66
465	466	4.451900	ACAACTCTGAACTACCACCAAAG	58.548	43.478	0.00	0.00	0.00	2.77
466	467	4.497291	ACAACTCTGAACTACCACCAAA	57.503	40.909	0.00	0.00	0.00	3.28
467	468	5.104859	TGTTACAACTCTGAACTACCACCAA	60.105	40.000	0.00	0.00	0.00	3.67
468	469	4.406326	TGTTACAACTCTGAACTACCACCA	59.594	41.667	0.00	0.00	0.00	4.17
469	470	4.952460	TGTTACAACTCTGAACTACCACC	58.048	43.478	0.00	0.00	0.00	4.61
470	471	6.220930	TCATGTTACAACTCTGAACTACCAC	58.779	40.000	0.00	0.00	0.00	4.16
471	472	6.413783	TCATGTTACAACTCTGAACTACCA	57.586	37.500	0.00	0.00	0.00	3.25
472	473	7.118422	GTTCATGTTACAACTCTGAACTACC	57.882	40.000	17.28	0.00	42.39	3.18
476	477	7.439655	AGAGAAGTTCATGTTACAACTCTGAAC	59.560	37.037	17.00	17.00	43.95	3.18
477	478	7.500992	AGAGAAGTTCATGTTACAACTCTGAA	58.499	34.615	5.50	0.00	31.38	3.02
478	479	7.055667	AGAGAAGTTCATGTTACAACTCTGA	57.944	36.000	5.50	0.00	31.38	3.27
479	480	6.925718	TGAGAGAAGTTCATGTTACAACTCTG	59.074	38.462	20.89	0.00	33.69	3.35
480	481	7.055667	TGAGAGAAGTTCATGTTACAACTCT	57.944	36.000	18.50	18.50	35.05	3.24
481	482	7.715265	TTGAGAGAAGTTCATGTTACAACTC	57.285	36.000	5.50	7.92	31.38	3.01
482	483	9.778741	TTATTGAGAGAAGTTCATGTTACAACT	57.221	29.630	5.50	0.00	34.16	3.16
489	490	9.653287	TCGTAATTTATTGAGAGAAGTTCATGT	57.347	29.630	5.50	0.00	0.00	3.21
492	493	9.869757	TCATCGTAATTTATTGAGAGAAGTTCA	57.130	29.630	5.50	0.00	0.00	3.18
494	495	8.821894	GCTCATCGTAATTTATTGAGAGAAGTT	58.178	33.333	13.69	0.00	36.72	2.66
495	496	7.981789	TGCTCATCGTAATTTATTGAGAGAAGT	59.018	33.333	13.69	0.00	36.72	3.01
496	497	8.357796	TGCTCATCGTAATTTATTGAGAGAAG	57.642	34.615	13.69	0.00	36.72	2.85
497	498	8.716646	TTGCTCATCGTAATTTATTGAGAGAA	57.283	30.769	13.69	6.53	36.72	2.87
498	499	7.439356	CCTTGCTCATCGTAATTTATTGAGAGA	59.561	37.037	13.69	3.92	36.72	3.10
499	500	7.439356	TCCTTGCTCATCGTAATTTATTGAGAG	59.561	37.037	13.69	0.00	36.72	3.20
500	501	7.272244	TCCTTGCTCATCGTAATTTATTGAGA	58.728	34.615	13.69	0.00	36.72	3.27
501	502	7.482654	TCCTTGCTCATCGTAATTTATTGAG	57.517	36.000	0.00	0.00	37.47	3.02
502	503	7.857734	TTCCTTGCTCATCGTAATTTATTGA	57.142	32.000	0.00	0.00	0.00	2.57
534	535	4.537433	CCTACGCAGCCCAGCTCC	62.537	72.222	0.00	0.00	36.40	4.70
548	549	3.751018	TGAGCCTCGCCCTCCCTA	61.751	66.667	0.00	0.00	0.00	3.53
763	768	1.152984	CTCACCAACACAGTGGGCA	60.153	57.895	5.31	0.00	43.56	5.36
982	1055	2.223665	GCATCCTGTTCTGCCTAATTGC	60.224	50.000	0.00	0.00	32.15	3.56
1040	1113	3.305398	AGACAAGGTAAAGTCGCTCAG	57.695	47.619	0.00	0.00	39.67	3.35
1351	1439	5.893824	GGTGGTAGATGGGATGAAAAAGATT	59.106	40.000	0.00	0.00	0.00	2.40
1731	1855	2.096466	CACGTCGCAGCAGTAAATTTGA	60.096	45.455	0.00	0.00	0.00	2.69
1925	2112	1.561542	CAGGTAGGCTCAAACCAGGAT	59.438	52.381	7.64	0.00	38.30	3.24
2018	2247	1.811359	AGTACTGCGAGTGACAGGTAC	59.189	52.381	0.00	0.00	39.55	3.34
2368	2629	6.853279	AACAGATTAAAACGATGCATTTCG	57.147	33.333	8.13	8.13	44.56	3.46
2743	3319	2.553028	GGCGAGAGAGATCAGAGGAGAT	60.553	54.545	0.00	0.00	0.00	2.75
2806	3387	4.309950	GGCGTCACCGGACTTGGT	62.310	66.667	9.46	0.00	45.21	3.67
2933	3854	0.881118	GCAGATGAAGAAAACGGGCA	59.119	50.000	0.00	0.00	0.00	5.36

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.