Multiple sequence alignment - TraesCS2D01G147400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G147400 chr2D 100.000 2288 0 0 1 2288 88299467 88301754 0.000000e+00 4226.0
1 TraesCS2D01G147400 chr2D 95.464 1411 59 4 306 1711 469162163 469163573 0.000000e+00 2246.0
2 TraesCS2D01G147400 chr2D 93.856 765 40 5 954 1711 618295746 618296510 0.000000e+00 1146.0
3 TraesCS2D01G147400 chr2D 86.250 80 9 2 1750 1828 626926959 626926881 4.050000e-13 86.1
4 TraesCS2D01G147400 chr3D 94.624 1730 68 15 3 1711 81833375 81835100 0.000000e+00 2656.0
5 TraesCS2D01G147400 chr3D 92.763 1741 81 18 3 1709 41618544 41616815 0.000000e+00 2475.0
6 TraesCS2D01G147400 chr3D 87.692 65 4 4 1765 1826 10422104 10422041 3.150000e-09 73.1
7 TraesCS2D01G147400 chr7A 92.894 1731 97 15 3 1711 221704933 221706659 0.000000e+00 2492.0
8 TraesCS2D01G147400 chr7A 89.231 65 4 3 1765 1827 448488441 448488378 6.780000e-11 78.7
9 TraesCS2D01G147400 chr2A 92.775 1730 95 14 3 1710 652573179 652574900 0.000000e+00 2475.0
10 TraesCS2D01G147400 chr2A 91.136 440 10 10 1858 2285 88671704 88672126 9.170000e-159 569.0
11 TraesCS2D01G147400 chr2A 100.000 36 0 0 1837 1872 88671657 88671692 1.470000e-07 67.6
12 TraesCS2D01G147400 chr3A 92.370 1730 107 14 3 1710 632271676 632273402 0.000000e+00 2440.0
13 TraesCS2D01G147400 chr3A 92.849 1692 94 12 46 1711 71154457 71156147 0.000000e+00 2429.0
14 TraesCS2D01G147400 chr3A 89.312 1759 109 19 3 1718 600090330 600088608 0.000000e+00 2134.0
15 TraesCS2D01G147400 chr3B 92.388 1721 81 21 19 1712 804610353 804612050 0.000000e+00 2407.0
16 TraesCS2D01G147400 chr6B 91.898 1728 96 19 5 1709 457228456 457230162 0.000000e+00 2375.0
17 TraesCS2D01G147400 chr6B 87.963 1753 135 22 3 1716 671866726 671865011 0.000000e+00 1999.0
18 TraesCS2D01G147400 chr1B 91.647 1712 90 22 3 1708 155744908 155746572 0.000000e+00 2320.0
19 TraesCS2D01G147400 chr1B 89.365 1749 111 32 4 1710 61492747 61491032 0.000000e+00 2130.0
20 TraesCS2D01G147400 chr1B 88.571 70 3 4 1758 1826 567963768 567963833 1.880000e-11 80.5
21 TraesCS2D01G147400 chr1A 90.548 1735 121 18 3 1721 463969299 463971006 0.000000e+00 2255.0
22 TraesCS2D01G147400 chr7B 89.675 1753 105 20 3 1711 537082191 537080471 0.000000e+00 2165.0
23 TraesCS2D01G147400 chr5B 86.580 462 43 9 1827 2285 669673668 669674113 2.040000e-135 492.0
24 TraesCS2D01G147400 chr5B 88.406 69 4 4 1758 1826 45977094 45977158 1.880000e-11 80.5
25 TraesCS2D01G147400 chr5A 89.568 278 24 1 2008 2285 658673845 658674117 4.680000e-92 348.0
26 TraesCS2D01G147400 chr5D 85.000 280 29 5 2008 2285 530428482 530428750 2.900000e-69 272.0
27 TraesCS2D01G147400 chr6A 87.324 71 3 5 1758 1826 558587912 558587978 2.440000e-10 76.8
28 TraesCS2D01G147400 chr7D 88.889 63 4 2 1767 1826 142616397 142616459 8.770000e-10 75.0
29 TraesCS2D01G147400 chr2B 80.180 111 10 10 1723 1827 35362657 35362553 3.150000e-09 73.1
30 TraesCS2D01G147400 chr1D 85.915 71 6 4 1758 1827 454153740 454153807 3.150000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G147400 chr2D 88299467 88301754 2287 False 4226 4226 100.000 1 2288 1 chr2D.!!$F1 2287
1 TraesCS2D01G147400 chr2D 469162163 469163573 1410 False 2246 2246 95.464 306 1711 1 chr2D.!!$F2 1405
2 TraesCS2D01G147400 chr2D 618295746 618296510 764 False 1146 1146 93.856 954 1711 1 chr2D.!!$F3 757
3 TraesCS2D01G147400 chr3D 81833375 81835100 1725 False 2656 2656 94.624 3 1711 1 chr3D.!!$F1 1708
4 TraesCS2D01G147400 chr3D 41616815 41618544 1729 True 2475 2475 92.763 3 1709 1 chr3D.!!$R2 1706
5 TraesCS2D01G147400 chr7A 221704933 221706659 1726 False 2492 2492 92.894 3 1711 1 chr7A.!!$F1 1708
6 TraesCS2D01G147400 chr2A 652573179 652574900 1721 False 2475 2475 92.775 3 1710 1 chr2A.!!$F1 1707
7 TraesCS2D01G147400 chr3A 632271676 632273402 1726 False 2440 2440 92.370 3 1710 1 chr3A.!!$F2 1707
8 TraesCS2D01G147400 chr3A 71154457 71156147 1690 False 2429 2429 92.849 46 1711 1 chr3A.!!$F1 1665
9 TraesCS2D01G147400 chr3A 600088608 600090330 1722 True 2134 2134 89.312 3 1718 1 chr3A.!!$R1 1715
10 TraesCS2D01G147400 chr3B 804610353 804612050 1697 False 2407 2407 92.388 19 1712 1 chr3B.!!$F1 1693
11 TraesCS2D01G147400 chr6B 457228456 457230162 1706 False 2375 2375 91.898 5 1709 1 chr6B.!!$F1 1704
12 TraesCS2D01G147400 chr6B 671865011 671866726 1715 True 1999 1999 87.963 3 1716 1 chr6B.!!$R1 1713
13 TraesCS2D01G147400 chr1B 155744908 155746572 1664 False 2320 2320 91.647 3 1708 1 chr1B.!!$F1 1705
14 TraesCS2D01G147400 chr1B 61491032 61492747 1715 True 2130 2130 89.365 4 1710 1 chr1B.!!$R1 1706
15 TraesCS2D01G147400 chr1A 463969299 463971006 1707 False 2255 2255 90.548 3 1721 1 chr1A.!!$F1 1718
16 TraesCS2D01G147400 chr7B 537080471 537082191 1720 True 2165 2165 89.675 3 1711 1 chr7B.!!$R1 1708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
244 255 0.104304 GGCACGACGGTCATTAGGAT 59.896 55.0 9.1 0.0 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2185 2277 0.029567 ATCTCGCCGAGTCGATGTTC 59.97 55.0 15.64 0.0 37.87 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 98 3.515286 TCGTCATCCTCGGCGGAC 61.515 66.667 7.21 5.01 46.80 4.79
112 117 2.279120 CGAGGTCGATCTGCCAGC 60.279 66.667 0.91 0.00 43.02 4.85
217 228 4.159266 CGATAGCCGTCTCCCAGA 57.841 61.111 0.00 0.00 0.00 3.86
244 255 0.104304 GGCACGACGGTCATTAGGAT 59.896 55.000 9.10 0.00 0.00 3.24
459 474 2.803155 TTCGAGCACACCTCCATGGC 62.803 60.000 6.96 0.00 40.22 4.40
505 520 1.613255 GCCATTCACCCGAGGAAGAAA 60.613 52.381 0.00 0.00 0.00 2.52
507 522 2.290323 CCATTCACCCGAGGAAGAAAGT 60.290 50.000 0.00 0.00 0.00 2.66
650 677 2.636403 GGGTGAGTAAATATAGGGGCGT 59.364 50.000 0.00 0.00 0.00 5.68
752 787 2.816087 ACTCCATGAATTGTGTGCAGAC 59.184 45.455 7.12 7.12 0.00 3.51
925 990 1.890041 AACAAGCGCCGCAACTACA 60.890 52.632 13.36 0.00 0.00 2.74
1317 1390 4.263243 GGCCTCCCTAAGTACTATCGAGTA 60.263 50.000 0.00 0.00 37.10 2.59
1366 1439 7.388224 TGGTTTATGCGTAGAACTGTTATGAAA 59.612 33.333 0.00 0.00 0.00 2.69
1387 1462 6.371548 TGAAATGTGGTACTGCTTATCTGAAC 59.628 38.462 0.00 0.00 0.00 3.18
1612 1703 0.108424 TGCAGGCAACCAAACAACAC 60.108 50.000 0.00 0.00 37.17 3.32
1712 1804 1.074248 AACCAAACACGCCCTAGGG 59.926 57.895 24.89 24.89 38.57 3.53
1721 1813 0.034477 ACGCCCTAGGGGTTTTGATG 60.034 55.000 29.57 0.36 46.84 3.07
1722 1814 0.034477 CGCCCTAGGGGTTTTGATGT 60.034 55.000 29.57 0.00 46.51 3.06
1723 1815 1.615919 CGCCCTAGGGGTTTTGATGTT 60.616 52.381 29.57 0.00 46.51 2.71
1724 1816 1.824852 GCCCTAGGGGTTTTGATGTTG 59.175 52.381 29.57 0.00 46.51 3.33
1725 1817 2.456577 CCCTAGGGGTTTTGATGTTGG 58.543 52.381 21.44 0.00 38.25 3.77
1726 1818 2.456577 CCTAGGGGTTTTGATGTTGGG 58.543 52.381 0.00 0.00 0.00 4.12
1727 1819 2.042433 CCTAGGGGTTTTGATGTTGGGA 59.958 50.000 0.00 0.00 0.00 4.37
1728 1820 2.309136 AGGGGTTTTGATGTTGGGAG 57.691 50.000 0.00 0.00 0.00 4.30
1729 1821 1.786441 AGGGGTTTTGATGTTGGGAGA 59.214 47.619 0.00 0.00 0.00 3.71
1730 1822 2.178984 AGGGGTTTTGATGTTGGGAGAA 59.821 45.455 0.00 0.00 0.00 2.87
1731 1823 3.173151 GGGGTTTTGATGTTGGGAGAAT 58.827 45.455 0.00 0.00 0.00 2.40
1732 1824 4.045334 AGGGGTTTTGATGTTGGGAGAATA 59.955 41.667 0.00 0.00 0.00 1.75
1733 1825 4.775253 GGGGTTTTGATGTTGGGAGAATAA 59.225 41.667 0.00 0.00 0.00 1.40
1734 1826 5.425217 GGGGTTTTGATGTTGGGAGAATAAT 59.575 40.000 0.00 0.00 0.00 1.28
1735 1827 6.406961 GGGGTTTTGATGTTGGGAGAATAATC 60.407 42.308 0.00 0.00 0.00 1.75
1736 1828 6.381133 GGGTTTTGATGTTGGGAGAATAATCT 59.619 38.462 0.00 0.00 39.10 2.40
1747 1839 4.030134 GAGAATAATCTCGTCGGTGTGT 57.970 45.455 0.00 0.00 42.54 3.72
1748 1840 3.770666 AGAATAATCTCGTCGGTGTGTG 58.229 45.455 0.00 0.00 0.00 3.82
1749 1841 3.192844 AGAATAATCTCGTCGGTGTGTGT 59.807 43.478 0.00 0.00 0.00 3.72
1750 1842 2.341318 TAATCTCGTCGGTGTGTGTG 57.659 50.000 0.00 0.00 0.00 3.82
1751 1843 0.319555 AATCTCGTCGGTGTGTGTGG 60.320 55.000 0.00 0.00 0.00 4.17
1752 1844 2.154798 ATCTCGTCGGTGTGTGTGGG 62.155 60.000 0.00 0.00 0.00 4.61
1753 1845 3.146726 CTCGTCGGTGTGTGTGGGT 62.147 63.158 0.00 0.00 0.00 4.51
1754 1846 2.660552 CGTCGGTGTGTGTGGGTC 60.661 66.667 0.00 0.00 0.00 4.46
1755 1847 2.502093 GTCGGTGTGTGTGGGTCA 59.498 61.111 0.00 0.00 0.00 4.02
1756 1848 1.885850 GTCGGTGTGTGTGGGTCAC 60.886 63.158 0.00 0.00 46.31 3.67
1757 1849 2.061578 TCGGTGTGTGTGGGTCACT 61.062 57.895 0.00 0.00 46.27 3.41
1758 1850 1.153249 CGGTGTGTGTGGGTCACTT 60.153 57.895 0.00 0.00 46.27 3.16
1759 1851 1.436195 CGGTGTGTGTGGGTCACTTG 61.436 60.000 0.00 0.00 46.27 3.16
1760 1852 0.393808 GGTGTGTGTGGGTCACTTGT 60.394 55.000 0.00 0.00 46.27 3.16
1761 1853 1.134340 GGTGTGTGTGGGTCACTTGTA 60.134 52.381 0.00 0.00 46.27 2.41
1762 1854 2.634600 GTGTGTGTGGGTCACTTGTAA 58.365 47.619 0.00 0.00 46.27 2.41
1763 1855 3.211045 GTGTGTGTGGGTCACTTGTAAT 58.789 45.455 0.00 0.00 46.27 1.89
1764 1856 4.382291 GTGTGTGTGGGTCACTTGTAATA 58.618 43.478 0.00 0.00 46.27 0.98
1765 1857 4.212636 GTGTGTGTGGGTCACTTGTAATAC 59.787 45.833 0.00 0.00 46.27 1.89
1766 1858 4.141688 TGTGTGTGGGTCACTTGTAATACA 60.142 41.667 0.00 0.00 46.27 2.29
1767 1859 4.817464 GTGTGTGGGTCACTTGTAATACAA 59.183 41.667 5.66 5.66 46.27 2.41
1768 1860 5.297278 GTGTGTGGGTCACTTGTAATACAAA 59.703 40.000 7.30 0.00 46.27 2.83
1769 1861 5.297278 TGTGTGGGTCACTTGTAATACAAAC 59.703 40.000 7.30 2.97 46.27 2.93
1770 1862 4.822896 TGTGGGTCACTTGTAATACAAACC 59.177 41.667 14.13 14.13 37.69 3.27
1771 1863 5.067954 GTGGGTCACTTGTAATACAAACCT 58.932 41.667 19.15 0.33 37.69 3.50
1772 1864 6.183361 TGTGGGTCACTTGTAATACAAACCTA 60.183 38.462 19.15 13.60 37.69 3.08
1773 1865 6.882678 GTGGGTCACTTGTAATACAAACCTAT 59.117 38.462 19.15 0.00 37.69 2.57
1774 1866 7.392393 GTGGGTCACTTGTAATACAAACCTATT 59.608 37.037 19.15 0.00 37.69 1.73
1775 1867 7.945664 TGGGTCACTTGTAATACAAACCTATTT 59.054 33.333 19.15 0.00 37.69 1.40
1776 1868 8.799367 GGGTCACTTGTAATACAAACCTATTTT 58.201 33.333 19.15 0.00 37.69 1.82
1777 1869 9.836076 GGTCACTTGTAATACAAACCTATTTTC 57.164 33.333 14.86 0.00 37.69 2.29
1778 1870 9.836076 GTCACTTGTAATACAAACCTATTTTCC 57.164 33.333 7.30 0.00 37.69 3.13
1779 1871 9.802039 TCACTTGTAATACAAACCTATTTTCCT 57.198 29.630 7.30 0.00 37.69 3.36
1809 1901 9.485206 AATCAATATATGAGGCAAATCTTTTGC 57.515 29.630 14.88 14.88 42.53 3.68
1816 1908 2.438868 GCAAATCTTTTGCCTCCGTT 57.561 45.000 12.74 0.00 39.38 4.44
1817 1909 2.754472 GCAAATCTTTTGCCTCCGTTT 58.246 42.857 12.74 0.00 39.38 3.60
1818 1910 3.908213 GCAAATCTTTTGCCTCCGTTTA 58.092 40.909 12.74 0.00 39.38 2.01
1819 1911 4.303282 GCAAATCTTTTGCCTCCGTTTAA 58.697 39.130 12.74 0.00 39.38 1.52
1820 1912 4.747605 GCAAATCTTTTGCCTCCGTTTAAA 59.252 37.500 12.74 0.00 39.38 1.52
1821 1913 5.235401 GCAAATCTTTTGCCTCCGTTTAAAA 59.765 36.000 12.74 0.00 39.38 1.52
1822 1914 6.238239 GCAAATCTTTTGCCTCCGTTTAAAAA 60.238 34.615 12.74 0.00 39.38 1.94
1849 1941 7.602517 ATGACAACTTTAGTAAGTGATGAGC 57.397 36.000 0.00 0.00 43.74 4.26
1850 1942 6.759272 TGACAACTTTAGTAAGTGATGAGCT 58.241 36.000 0.00 0.00 43.74 4.09
1851 1943 6.646653 TGACAACTTTAGTAAGTGATGAGCTG 59.353 38.462 0.00 0.00 43.74 4.24
1852 1944 5.934625 ACAACTTTAGTAAGTGATGAGCTGG 59.065 40.000 0.00 0.00 43.74 4.85
1853 1945 6.166279 CAACTTTAGTAAGTGATGAGCTGGA 58.834 40.000 0.00 0.00 43.74 3.86
1854 1946 5.971763 ACTTTAGTAAGTGATGAGCTGGAG 58.028 41.667 0.00 0.00 42.91 3.86
1855 1947 5.717178 ACTTTAGTAAGTGATGAGCTGGAGA 59.283 40.000 0.00 0.00 42.91 3.71
1856 1948 6.382570 ACTTTAGTAAGTGATGAGCTGGAGAT 59.617 38.462 0.00 0.00 42.91 2.75
1857 1949 4.669206 AGTAAGTGATGAGCTGGAGATG 57.331 45.455 0.00 0.00 0.00 2.90
1858 1950 4.285020 AGTAAGTGATGAGCTGGAGATGA 58.715 43.478 0.00 0.00 0.00 2.92
1859 1951 3.823281 AAGTGATGAGCTGGAGATGAG 57.177 47.619 0.00 0.00 0.00 2.90
1860 1952 3.029483 AGTGATGAGCTGGAGATGAGA 57.971 47.619 0.00 0.00 0.00 3.27
1861 1953 3.578978 AGTGATGAGCTGGAGATGAGAT 58.421 45.455 0.00 0.00 0.00 2.75
1862 1954 3.322541 AGTGATGAGCTGGAGATGAGATG 59.677 47.826 0.00 0.00 0.00 2.90
1863 1955 3.321396 GTGATGAGCTGGAGATGAGATGA 59.679 47.826 0.00 0.00 0.00 2.92
1864 1956 3.965347 TGATGAGCTGGAGATGAGATGAA 59.035 43.478 0.00 0.00 0.00 2.57
1865 1957 3.815856 TGAGCTGGAGATGAGATGAAC 57.184 47.619 0.00 0.00 0.00 3.18
1866 1958 3.102204 TGAGCTGGAGATGAGATGAACA 58.898 45.455 0.00 0.00 0.00 3.18
1867 1959 3.132467 TGAGCTGGAGATGAGATGAACAG 59.868 47.826 0.00 0.00 0.00 3.16
1868 1960 3.372897 AGCTGGAGATGAGATGAACAGA 58.627 45.455 0.00 0.00 0.00 3.41
1869 1961 3.773667 AGCTGGAGATGAGATGAACAGAA 59.226 43.478 0.00 0.00 0.00 3.02
1870 1962 3.870419 GCTGGAGATGAGATGAACAGAAC 59.130 47.826 0.00 0.00 0.00 3.01
1871 1963 4.382901 GCTGGAGATGAGATGAACAGAACT 60.383 45.833 0.00 0.00 0.00 3.01
1872 1964 5.163468 GCTGGAGATGAGATGAACAGAACTA 60.163 44.000 0.00 0.00 0.00 2.24
1873 1965 6.214191 TGGAGATGAGATGAACAGAACTAC 57.786 41.667 0.00 0.00 0.00 2.73
1874 1966 5.716703 TGGAGATGAGATGAACAGAACTACA 59.283 40.000 0.00 0.00 0.00 2.74
1875 1967 6.039616 GGAGATGAGATGAACAGAACTACAC 58.960 44.000 0.00 0.00 0.00 2.90
1876 1968 6.350528 GGAGATGAGATGAACAGAACTACACA 60.351 42.308 0.00 0.00 0.00 3.72
1877 1969 6.997655 AGATGAGATGAACAGAACTACACAA 58.002 36.000 0.00 0.00 0.00 3.33
1878 1970 6.870965 AGATGAGATGAACAGAACTACACAAC 59.129 38.462 0.00 0.00 0.00 3.32
1879 1971 5.297547 TGAGATGAACAGAACTACACAACC 58.702 41.667 0.00 0.00 0.00 3.77
1880 1972 5.070446 TGAGATGAACAGAACTACACAACCT 59.930 40.000 0.00 0.00 0.00 3.50
1881 1973 6.266786 TGAGATGAACAGAACTACACAACCTA 59.733 38.462 0.00 0.00 0.00 3.08
1882 1974 7.062749 AGATGAACAGAACTACACAACCTAA 57.937 36.000 0.00 0.00 0.00 2.69
1883 1975 7.506114 AGATGAACAGAACTACACAACCTAAA 58.494 34.615 0.00 0.00 0.00 1.85
1884 1976 8.157476 AGATGAACAGAACTACACAACCTAAAT 58.843 33.333 0.00 0.00 0.00 1.40
1885 1977 9.431887 GATGAACAGAACTACACAACCTAAATA 57.568 33.333 0.00 0.00 0.00 1.40
1886 1978 9.959721 ATGAACAGAACTACACAACCTAAATAT 57.040 29.630 0.00 0.00 0.00 1.28
1911 2003 9.956720 ATAGTAATTTGCATCTTTAAGCATCAC 57.043 29.630 0.00 0.00 40.94 3.06
1912 2004 7.260603 AGTAATTTGCATCTTTAAGCATCACC 58.739 34.615 0.00 0.00 40.94 4.02
1913 2005 4.454728 TTTGCATCTTTAAGCATCACCC 57.545 40.909 0.00 0.00 40.94 4.61
1914 2006 3.084536 TGCATCTTTAAGCATCACCCA 57.915 42.857 0.00 0.00 35.51 4.51
1915 2007 3.018856 TGCATCTTTAAGCATCACCCAG 58.981 45.455 0.00 0.00 35.51 4.45
1916 2008 3.019564 GCATCTTTAAGCATCACCCAGT 58.980 45.455 0.00 0.00 0.00 4.00
1917 2009 4.199310 GCATCTTTAAGCATCACCCAGTA 58.801 43.478 0.00 0.00 0.00 2.74
1918 2010 4.035675 GCATCTTTAAGCATCACCCAGTAC 59.964 45.833 0.00 0.00 0.00 2.73
1919 2011 5.431765 CATCTTTAAGCATCACCCAGTACT 58.568 41.667 0.00 0.00 0.00 2.73
1920 2012 5.499004 TCTTTAAGCATCACCCAGTACTT 57.501 39.130 0.00 0.00 0.00 2.24
1921 2013 6.614694 TCTTTAAGCATCACCCAGTACTTA 57.385 37.500 0.00 0.00 0.00 2.24
1922 2014 6.403878 TCTTTAAGCATCACCCAGTACTTAC 58.596 40.000 0.00 0.00 0.00 2.34
1923 2015 6.212791 TCTTTAAGCATCACCCAGTACTTACT 59.787 38.462 0.00 0.00 36.90 2.24
1924 2016 7.398047 TCTTTAAGCATCACCCAGTACTTACTA 59.602 37.037 0.00 0.00 34.13 1.82
1925 2017 7.670605 TTAAGCATCACCCAGTACTTACTAT 57.329 36.000 0.00 0.00 34.13 2.12
1926 2018 8.771521 TTAAGCATCACCCAGTACTTACTATA 57.228 34.615 0.00 0.00 34.13 1.31
1927 2019 6.902771 AGCATCACCCAGTACTTACTATAG 57.097 41.667 0.00 0.00 34.13 1.31
1928 2020 5.244178 AGCATCACCCAGTACTTACTATAGC 59.756 44.000 0.00 0.00 34.13 2.97
1929 2021 5.010719 GCATCACCCAGTACTTACTATAGCA 59.989 44.000 0.00 0.00 34.13 3.49
1930 2022 6.462487 GCATCACCCAGTACTTACTATAGCAA 60.462 42.308 0.00 0.00 34.13 3.91
1931 2023 6.461110 TCACCCAGTACTTACTATAGCAAC 57.539 41.667 0.00 0.00 34.13 4.17
1932 2024 5.066893 TCACCCAGTACTTACTATAGCAACG 59.933 44.000 0.00 0.00 34.13 4.10
1933 2025 4.202090 ACCCAGTACTTACTATAGCAACGC 60.202 45.833 0.00 0.00 34.13 4.84
1934 2026 4.202080 CCCAGTACTTACTATAGCAACGCA 60.202 45.833 0.00 0.00 34.13 5.24
1935 2027 5.509163 CCCAGTACTTACTATAGCAACGCAT 60.509 44.000 0.00 0.00 34.13 4.73
1936 2028 5.629849 CCAGTACTTACTATAGCAACGCATC 59.370 44.000 0.00 0.00 34.13 3.91
1937 2029 6.206498 CAGTACTTACTATAGCAACGCATCA 58.794 40.000 0.00 0.00 34.13 3.07
1938 2030 6.863645 CAGTACTTACTATAGCAACGCATCAT 59.136 38.462 0.00 0.00 34.13 2.45
1939 2031 7.382488 CAGTACTTACTATAGCAACGCATCATT 59.618 37.037 0.00 0.00 34.13 2.57
1940 2032 6.530913 ACTTACTATAGCAACGCATCATTG 57.469 37.500 0.00 0.00 0.00 2.82
1941 2033 6.049149 ACTTACTATAGCAACGCATCATTGT 58.951 36.000 0.00 0.00 0.00 2.71
1942 2034 6.201044 ACTTACTATAGCAACGCATCATTGTC 59.799 38.462 0.00 0.00 0.00 3.18
1943 2035 3.809832 ACTATAGCAACGCATCATTGTCC 59.190 43.478 0.00 0.00 0.00 4.02
1944 2036 1.378531 TAGCAACGCATCATTGTCCC 58.621 50.000 0.00 0.00 0.00 4.46
1945 2037 0.608856 AGCAACGCATCATTGTCCCA 60.609 50.000 0.00 0.00 0.00 4.37
1946 2038 0.179156 GCAACGCATCATTGTCCCAG 60.179 55.000 0.00 0.00 0.00 4.45
1947 2039 1.452110 CAACGCATCATTGTCCCAGA 58.548 50.000 0.00 0.00 0.00 3.86
1948 2040 2.019249 CAACGCATCATTGTCCCAGAT 58.981 47.619 0.00 0.00 0.00 2.90
1949 2041 2.424601 CAACGCATCATTGTCCCAGATT 59.575 45.455 0.00 0.00 0.00 2.40
1950 2042 2.292267 ACGCATCATTGTCCCAGATTC 58.708 47.619 0.00 0.00 0.00 2.52
1951 2043 1.605710 CGCATCATTGTCCCAGATTCC 59.394 52.381 0.00 0.00 0.00 3.01
1952 2044 2.658285 GCATCATTGTCCCAGATTCCA 58.342 47.619 0.00 0.00 0.00 3.53
1953 2045 2.621998 GCATCATTGTCCCAGATTCCAG 59.378 50.000 0.00 0.00 0.00 3.86
1954 2046 3.894759 CATCATTGTCCCAGATTCCAGT 58.105 45.455 0.00 0.00 0.00 4.00
1955 2047 3.354948 TCATTGTCCCAGATTCCAGTG 57.645 47.619 0.00 0.00 0.00 3.66
1956 2048 2.025981 TCATTGTCCCAGATTCCAGTGG 60.026 50.000 1.40 1.40 0.00 4.00
1957 2049 1.741028 TTGTCCCAGATTCCAGTGGA 58.259 50.000 8.12 8.12 35.67 4.02
1958 2050 1.741028 TGTCCCAGATTCCAGTGGAA 58.259 50.000 26.54 26.54 46.39 3.53
1959 2051 2.061848 TGTCCCAGATTCCAGTGGAAA 58.938 47.619 27.93 12.13 45.41 3.13
1960 2052 2.224769 TGTCCCAGATTCCAGTGGAAAC 60.225 50.000 27.93 24.46 45.41 2.78
1961 2053 2.061848 TCCCAGATTCCAGTGGAAACA 58.938 47.619 27.93 6.59 45.41 2.83
1962 2054 2.445145 TCCCAGATTCCAGTGGAAACAA 59.555 45.455 27.93 6.18 45.41 2.83
1963 2055 3.117322 TCCCAGATTCCAGTGGAAACAAA 60.117 43.478 27.93 5.76 45.41 2.83
1964 2056 3.834231 CCCAGATTCCAGTGGAAACAAAT 59.166 43.478 27.93 11.70 45.41 2.32
1965 2057 4.284234 CCCAGATTCCAGTGGAAACAAATT 59.716 41.667 27.93 10.93 45.41 1.82
1966 2058 5.480073 CCCAGATTCCAGTGGAAACAAATTA 59.520 40.000 27.93 3.31 45.41 1.40
1967 2059 6.389906 CCAGATTCCAGTGGAAACAAATTAC 58.610 40.000 27.93 11.65 45.41 1.89
1968 2060 6.015519 CCAGATTCCAGTGGAAACAAATTACA 60.016 38.462 27.93 1.70 45.41 2.41
1974 2066 4.584327 GTGGAAACAAATTACACCAGCT 57.416 40.909 0.00 0.00 45.67 4.24
1975 2067 5.699097 GTGGAAACAAATTACACCAGCTA 57.301 39.130 0.00 0.00 45.67 3.32
1976 2068 6.267496 GTGGAAACAAATTACACCAGCTAT 57.733 37.500 0.00 0.00 45.67 2.97
1977 2069 6.092748 GTGGAAACAAATTACACCAGCTATG 58.907 40.000 0.00 0.00 45.67 2.23
1978 2070 5.184864 TGGAAACAAATTACACCAGCTATGG 59.815 40.000 2.47 0.00 45.95 2.74
1979 2071 8.241317 TGGAAACAAATTACACCAGCTATGGC 62.241 42.308 0.00 0.00 44.84 4.40
1994 2086 4.508662 GCTATGGCTGTAATCTCATACCC 58.491 47.826 0.00 0.00 35.22 3.69
1995 2087 4.020218 GCTATGGCTGTAATCTCATACCCA 60.020 45.833 0.00 0.00 35.22 4.51
1996 2088 3.838244 TGGCTGTAATCTCATACCCAC 57.162 47.619 0.00 0.00 0.00 4.61
1997 2089 2.438021 TGGCTGTAATCTCATACCCACC 59.562 50.000 0.00 0.00 0.00 4.61
1998 2090 2.706190 GGCTGTAATCTCATACCCACCT 59.294 50.000 0.00 0.00 0.00 4.00
1999 2091 3.136626 GGCTGTAATCTCATACCCACCTT 59.863 47.826 0.00 0.00 0.00 3.50
2000 2092 4.347000 GGCTGTAATCTCATACCCACCTTA 59.653 45.833 0.00 0.00 0.00 2.69
2001 2093 5.163237 GGCTGTAATCTCATACCCACCTTAA 60.163 44.000 0.00 0.00 0.00 1.85
2002 2094 5.758784 GCTGTAATCTCATACCCACCTTAAC 59.241 44.000 0.00 0.00 0.00 2.01
2003 2095 6.408206 GCTGTAATCTCATACCCACCTTAACT 60.408 42.308 0.00 0.00 0.00 2.24
2004 2096 6.884832 TGTAATCTCATACCCACCTTAACTG 58.115 40.000 0.00 0.00 0.00 3.16
2005 2097 5.373812 AATCTCATACCCACCTTAACTGG 57.626 43.478 0.00 0.00 0.00 4.00
2006 2098 3.798515 TCTCATACCCACCTTAACTGGT 58.201 45.455 0.00 0.00 41.77 4.00
2007 2099 4.950361 TCTCATACCCACCTTAACTGGTA 58.050 43.478 0.00 0.00 38.45 3.25
2008 2100 5.343715 TCTCATACCCACCTTAACTGGTAA 58.656 41.667 0.00 0.00 38.45 2.85
2009 2101 5.786457 TCTCATACCCACCTTAACTGGTAAA 59.214 40.000 0.00 0.00 38.45 2.01
2010 2102 6.445786 TCTCATACCCACCTTAACTGGTAAAT 59.554 38.462 0.00 0.00 38.45 1.40
2011 2103 6.419791 TCATACCCACCTTAACTGGTAAATG 58.580 40.000 0.00 0.00 38.45 2.32
2012 2104 4.734843 ACCCACCTTAACTGGTAAATGT 57.265 40.909 0.00 0.00 38.45 2.71
2013 2105 4.659115 ACCCACCTTAACTGGTAAATGTC 58.341 43.478 0.00 0.00 38.45 3.06
2014 2106 4.014406 CCCACCTTAACTGGTAAATGTCC 58.986 47.826 0.00 0.00 38.45 4.02
2015 2107 4.507691 CCCACCTTAACTGGTAAATGTCCA 60.508 45.833 0.00 0.00 38.45 4.02
2022 2114 3.340814 CTGGTAAATGTCCAGTCTGCT 57.659 47.619 4.06 0.00 45.09 4.24
2023 2115 3.005554 CTGGTAAATGTCCAGTCTGCTG 58.994 50.000 4.06 0.00 45.09 4.41
2024 2116 2.371841 TGGTAAATGTCCAGTCTGCTGT 59.628 45.455 0.00 0.00 41.02 4.40
2025 2117 3.580895 TGGTAAATGTCCAGTCTGCTGTA 59.419 43.478 0.00 0.00 41.02 2.74
2026 2118 3.933332 GGTAAATGTCCAGTCTGCTGTAC 59.067 47.826 0.00 0.00 41.02 2.90
2027 2119 3.769739 AAATGTCCAGTCTGCTGTACA 57.230 42.857 0.00 0.00 43.91 2.90
2029 2121 3.988976 ATGTCCAGTCTGCTGTACATT 57.011 42.857 0.00 0.00 45.90 2.71
2030 2122 3.769739 TGTCCAGTCTGCTGTACATTT 57.230 42.857 0.00 0.00 36.78 2.32
2031 2123 4.085357 TGTCCAGTCTGCTGTACATTTT 57.915 40.909 0.00 0.00 36.78 1.82
2032 2124 5.222079 TGTCCAGTCTGCTGTACATTTTA 57.778 39.130 0.00 0.00 36.78 1.52
2033 2125 5.804639 TGTCCAGTCTGCTGTACATTTTAT 58.195 37.500 0.00 0.00 36.78 1.40
2034 2126 6.237901 TGTCCAGTCTGCTGTACATTTTATT 58.762 36.000 0.00 0.00 36.78 1.40
2035 2127 6.149308 TGTCCAGTCTGCTGTACATTTTATTG 59.851 38.462 0.00 0.00 36.78 1.90
2036 2128 6.371548 GTCCAGTCTGCTGTACATTTTATTGA 59.628 38.462 0.00 0.00 41.02 2.57
2037 2129 6.371548 TCCAGTCTGCTGTACATTTTATTGAC 59.628 38.462 0.00 0.00 41.02 3.18
2038 2130 6.372659 CCAGTCTGCTGTACATTTTATTGACT 59.627 38.462 0.00 1.52 41.02 3.41
2039 2131 7.239271 CAGTCTGCTGTACATTTTATTGACTG 58.761 38.462 16.75 16.75 40.67 3.51
2040 2132 7.118245 CAGTCTGCTGTACATTTTATTGACTGA 59.882 37.037 21.22 5.44 45.84 3.41
2041 2133 7.661437 AGTCTGCTGTACATTTTATTGACTGAA 59.339 33.333 0.00 0.00 31.09 3.02
2042 2134 7.746475 GTCTGCTGTACATTTTATTGACTGAAC 59.254 37.037 0.00 0.00 0.00 3.18
2043 2135 7.661437 TCTGCTGTACATTTTATTGACTGAACT 59.339 33.333 0.00 0.00 0.00 3.01
2044 2136 8.165239 TGCTGTACATTTTATTGACTGAACTT 57.835 30.769 0.00 0.00 0.00 2.66
2045 2137 9.278978 TGCTGTACATTTTATTGACTGAACTTA 57.721 29.630 0.00 0.00 0.00 2.24
2056 2148 7.986085 ATTGACTGAACTTATTACACTTGCT 57.014 32.000 0.00 0.00 0.00 3.91
2058 2150 7.884816 TGACTGAACTTATTACACTTGCTAC 57.115 36.000 0.00 0.00 0.00 3.58
2059 2151 7.438564 TGACTGAACTTATTACACTTGCTACA 58.561 34.615 0.00 0.00 0.00 2.74
2060 2152 7.929245 TGACTGAACTTATTACACTTGCTACAA 59.071 33.333 0.00 0.00 0.00 2.41
2061 2153 8.084590 ACTGAACTTATTACACTTGCTACAAC 57.915 34.615 0.00 0.00 0.00 3.32
2062 2154 7.931948 ACTGAACTTATTACACTTGCTACAACT 59.068 33.333 0.00 0.00 0.00 3.16
2063 2155 8.083462 TGAACTTATTACACTTGCTACAACTG 57.917 34.615 0.00 0.00 0.00 3.16
2064 2156 7.713507 TGAACTTATTACACTTGCTACAACTGT 59.286 33.333 0.00 0.00 0.00 3.55
2065 2157 8.446599 AACTTATTACACTTGCTACAACTGTT 57.553 30.769 0.00 0.00 0.00 3.16
2066 2158 8.446599 ACTTATTACACTTGCTACAACTGTTT 57.553 30.769 0.00 0.00 0.00 2.83
2067 2159 9.550406 ACTTATTACACTTGCTACAACTGTTTA 57.450 29.630 0.00 0.00 0.00 2.01
2071 2163 5.985781 ACACTTGCTACAACTGTTTATTCG 58.014 37.500 0.00 0.00 0.00 3.34
2072 2164 5.049680 ACACTTGCTACAACTGTTTATTCGG 60.050 40.000 0.00 0.00 0.00 4.30
2073 2165 5.049680 CACTTGCTACAACTGTTTATTCGGT 60.050 40.000 0.00 0.00 0.00 4.69
2074 2166 5.049680 ACTTGCTACAACTGTTTATTCGGTG 60.050 40.000 0.00 0.00 0.00 4.94
2075 2167 3.187637 TGCTACAACTGTTTATTCGGTGC 59.812 43.478 0.00 0.00 0.00 5.01
2076 2168 3.187637 GCTACAACTGTTTATTCGGTGCA 59.812 43.478 0.00 0.00 0.00 4.57
2077 2169 3.896648 ACAACTGTTTATTCGGTGCAG 57.103 42.857 0.00 0.00 0.00 4.41
2078 2170 2.031157 ACAACTGTTTATTCGGTGCAGC 60.031 45.455 5.64 5.64 0.00 5.25
2079 2171 1.890876 ACTGTTTATTCGGTGCAGCA 58.109 45.000 17.33 0.00 0.00 4.41
2080 2172 2.226330 ACTGTTTATTCGGTGCAGCAA 58.774 42.857 17.33 9.74 0.00 3.91
2081 2173 2.621055 ACTGTTTATTCGGTGCAGCAAA 59.379 40.909 17.33 3.71 0.00 3.68
2082 2174 3.236816 CTGTTTATTCGGTGCAGCAAAG 58.763 45.455 17.33 0.00 0.00 2.77
2083 2175 2.881513 TGTTTATTCGGTGCAGCAAAGA 59.118 40.909 17.33 4.51 0.00 2.52
2084 2176 3.316588 TGTTTATTCGGTGCAGCAAAGAA 59.683 39.130 17.33 14.08 0.00 2.52
2085 2177 3.552604 TTATTCGGTGCAGCAAAGAAC 57.447 42.857 17.33 0.00 0.00 3.01
2086 2178 0.598065 ATTCGGTGCAGCAAAGAACC 59.402 50.000 17.33 2.81 0.00 3.62
2087 2179 1.452145 TTCGGTGCAGCAAAGAACCC 61.452 55.000 17.33 0.00 0.00 4.11
2088 2180 2.192861 CGGTGCAGCAAAGAACCCA 61.193 57.895 17.33 0.00 0.00 4.51
2089 2181 1.363807 GGTGCAGCAAAGAACCCAC 59.636 57.895 11.86 0.00 0.00 4.61
2090 2182 1.391157 GGTGCAGCAAAGAACCCACA 61.391 55.000 11.86 0.00 0.00 4.17
2091 2183 0.031178 GTGCAGCAAAGAACCCACAG 59.969 55.000 0.00 0.00 0.00 3.66
2092 2184 1.006922 GCAGCAAAGAACCCACAGC 60.007 57.895 0.00 0.00 0.00 4.40
2093 2185 1.737355 GCAGCAAAGAACCCACAGCA 61.737 55.000 0.00 0.00 0.00 4.41
2094 2186 0.746063 CAGCAAAGAACCCACAGCAA 59.254 50.000 0.00 0.00 0.00 3.91
2095 2187 1.136695 CAGCAAAGAACCCACAGCAAA 59.863 47.619 0.00 0.00 0.00 3.68
2096 2188 1.136891 AGCAAAGAACCCACAGCAAAC 59.863 47.619 0.00 0.00 0.00 2.93
2097 2189 1.134848 GCAAAGAACCCACAGCAAACA 60.135 47.619 0.00 0.00 0.00 2.83
2098 2190 2.539476 CAAAGAACCCACAGCAAACAC 58.461 47.619 0.00 0.00 0.00 3.32
2099 2191 0.738389 AAGAACCCACAGCAAACACG 59.262 50.000 0.00 0.00 0.00 4.49
2100 2192 1.299089 GAACCCACAGCAAACACGC 60.299 57.895 0.00 0.00 0.00 5.34
2101 2193 1.999071 GAACCCACAGCAAACACGCA 61.999 55.000 0.00 0.00 0.00 5.24
2102 2194 2.026014 CCCACAGCAAACACGCAC 59.974 61.111 0.00 0.00 0.00 5.34
2103 2195 2.352229 CCACAGCAAACACGCACG 60.352 61.111 0.00 0.00 0.00 5.34
2104 2196 3.018428 CACAGCAAACACGCACGC 61.018 61.111 0.00 0.00 0.00 5.34
2105 2197 3.202001 ACAGCAAACACGCACGCT 61.202 55.556 0.00 0.00 34.29 5.07
2106 2198 2.425773 CAGCAAACACGCACGCTC 60.426 61.111 0.00 0.00 30.72 5.03
2107 2199 2.588877 AGCAAACACGCACGCTCT 60.589 55.556 0.00 0.00 0.00 4.09
2108 2200 2.425773 GCAAACACGCACGCTCTG 60.426 61.111 0.00 0.00 0.00 3.35
2109 2201 3.014036 CAAACACGCACGCTCTGT 58.986 55.556 0.00 0.00 0.00 3.41
2110 2202 1.827315 GCAAACACGCACGCTCTGTA 61.827 55.000 0.00 0.00 0.00 2.74
2111 2203 0.161658 CAAACACGCACGCTCTGTAG 59.838 55.000 0.00 0.00 0.00 2.74
2112 2204 0.944311 AAACACGCACGCTCTGTAGG 60.944 55.000 0.00 0.00 0.00 3.18
2113 2205 2.083835 AACACGCACGCTCTGTAGGT 62.084 55.000 0.00 0.00 0.00 3.08
2114 2206 1.801913 CACGCACGCTCTGTAGGTC 60.802 63.158 0.00 0.00 0.00 3.85
2115 2207 1.972223 ACGCACGCTCTGTAGGTCT 60.972 57.895 0.00 0.00 0.00 3.85
2116 2208 1.226435 CGCACGCTCTGTAGGTCTC 60.226 63.158 0.00 0.00 0.00 3.36
2117 2209 1.649390 CGCACGCTCTGTAGGTCTCT 61.649 60.000 0.00 0.00 0.00 3.10
2118 2210 0.179150 GCACGCTCTGTAGGTCTCTG 60.179 60.000 0.00 0.00 0.00 3.35
2119 2211 0.179150 CACGCTCTGTAGGTCTCTGC 60.179 60.000 0.00 0.00 0.00 4.26
2120 2212 1.316706 ACGCTCTGTAGGTCTCTGCC 61.317 60.000 0.00 0.00 0.00 4.85
2121 2213 1.315981 CGCTCTGTAGGTCTCTGCCA 61.316 60.000 0.00 0.00 0.00 4.92
2122 2214 0.174617 GCTCTGTAGGTCTCTGCCAC 59.825 60.000 0.00 0.00 0.00 5.01
2123 2215 0.453793 CTCTGTAGGTCTCTGCCACG 59.546 60.000 0.00 0.00 0.00 4.94
2124 2216 0.965866 TCTGTAGGTCTCTGCCACGG 60.966 60.000 0.00 0.00 0.00 4.94
2125 2217 1.949847 CTGTAGGTCTCTGCCACGGG 61.950 65.000 0.00 0.00 0.00 5.28
2164 2256 4.834357 AAAAATGAAAGCAAACATGCCC 57.166 36.364 0.00 0.00 34.90 5.36
2165 2257 3.775261 AAATGAAAGCAAACATGCCCT 57.225 38.095 0.00 0.00 34.90 5.19
2166 2258 4.888326 AAATGAAAGCAAACATGCCCTA 57.112 36.364 0.00 0.00 34.90 3.53
2167 2259 3.874392 ATGAAAGCAAACATGCCCTAC 57.126 42.857 0.00 0.00 34.90 3.18
2168 2260 2.591923 TGAAAGCAAACATGCCCTACA 58.408 42.857 0.00 0.00 34.90 2.74
2169 2261 2.295909 TGAAAGCAAACATGCCCTACAC 59.704 45.455 0.00 0.00 34.90 2.90
2170 2262 1.993956 AAGCAAACATGCCCTACACA 58.006 45.000 0.00 0.00 34.90 3.72
2171 2263 2.220653 AGCAAACATGCCCTACACAT 57.779 45.000 0.00 0.00 34.90 3.21
2172 2264 2.094675 AGCAAACATGCCCTACACATC 58.905 47.619 0.00 0.00 34.90 3.06
2173 2265 1.202177 GCAAACATGCCCTACACATCG 60.202 52.381 0.00 0.00 0.00 3.84
2174 2266 1.401552 CAAACATGCCCTACACATCGG 59.598 52.381 0.00 0.00 0.00 4.18
2175 2267 0.908910 AACATGCCCTACACATCGGA 59.091 50.000 0.00 0.00 0.00 4.55
2176 2268 0.465705 ACATGCCCTACACATCGGAG 59.534 55.000 0.00 0.00 0.00 4.63
2177 2269 0.752658 CATGCCCTACACATCGGAGA 59.247 55.000 0.00 0.00 45.75 3.71
2178 2270 1.138859 CATGCCCTACACATCGGAGAA 59.861 52.381 0.00 0.00 43.58 2.87
2179 2271 1.271856 TGCCCTACACATCGGAGAAA 58.728 50.000 0.00 0.00 43.58 2.52
2180 2272 1.837439 TGCCCTACACATCGGAGAAAT 59.163 47.619 0.00 0.00 43.58 2.17
2181 2273 2.158957 TGCCCTACACATCGGAGAAATC 60.159 50.000 0.00 0.00 43.58 2.17
2182 2274 2.807108 GCCCTACACATCGGAGAAATCC 60.807 54.545 0.00 0.00 43.58 3.01
2183 2275 2.434336 CCCTACACATCGGAGAAATCCA 59.566 50.000 0.00 0.00 43.58 3.41
2184 2276 3.493350 CCCTACACATCGGAGAAATCCAG 60.493 52.174 0.00 0.00 43.58 3.86
2185 2277 2.698855 ACACATCGGAGAAATCCAGG 57.301 50.000 0.00 0.00 43.58 4.45
2186 2278 2.187958 ACACATCGGAGAAATCCAGGA 58.812 47.619 0.00 0.00 43.58 3.86
2187 2279 2.571653 ACACATCGGAGAAATCCAGGAA 59.428 45.455 0.00 0.00 43.58 3.36
2188 2280 2.939103 CACATCGGAGAAATCCAGGAAC 59.061 50.000 0.00 0.00 43.58 3.62
2189 2281 2.571653 ACATCGGAGAAATCCAGGAACA 59.428 45.455 0.00 0.00 43.58 3.18
2190 2282 3.200825 ACATCGGAGAAATCCAGGAACAT 59.799 43.478 0.00 0.00 43.58 2.71
2191 2283 3.543680 TCGGAGAAATCCAGGAACATC 57.456 47.619 0.00 0.00 0.00 3.06
2192 2284 2.159099 TCGGAGAAATCCAGGAACATCG 60.159 50.000 0.00 0.00 0.00 3.84
2193 2285 2.159099 CGGAGAAATCCAGGAACATCGA 60.159 50.000 0.00 0.00 0.00 3.59
2194 2286 3.198872 GGAGAAATCCAGGAACATCGAC 58.801 50.000 0.00 0.00 0.00 4.20
2195 2287 3.118592 GGAGAAATCCAGGAACATCGACT 60.119 47.826 0.00 0.00 0.00 4.18
2196 2288 4.116238 GAGAAATCCAGGAACATCGACTC 58.884 47.826 0.00 0.00 0.00 3.36
2197 2289 2.586258 AATCCAGGAACATCGACTCG 57.414 50.000 0.00 0.00 0.00 4.18
2198 2290 0.747255 ATCCAGGAACATCGACTCGG 59.253 55.000 0.00 0.00 0.00 4.63
2199 2291 1.519455 CCAGGAACATCGACTCGGC 60.519 63.158 0.00 0.00 0.00 5.54
2200 2292 1.874019 CAGGAACATCGACTCGGCG 60.874 63.158 0.00 0.00 0.00 6.46
2201 2293 2.044555 AGGAACATCGACTCGGCGA 61.045 57.895 10.14 10.14 45.22 5.54
2202 2294 1.586564 GGAACATCGACTCGGCGAG 60.587 63.158 33.42 33.42 44.26 5.03
2203 2295 1.428219 GAACATCGACTCGGCGAGA 59.572 57.895 40.35 21.26 44.26 4.04
2204 2296 0.029567 GAACATCGACTCGGCGAGAT 59.970 55.000 40.35 25.10 44.26 2.75
2205 2297 0.029567 AACATCGACTCGGCGAGATC 59.970 55.000 40.35 29.45 44.26 2.75
2206 2298 1.439529 CATCGACTCGGCGAGATCG 60.440 63.158 40.35 36.77 44.26 3.69
2207 2299 1.594564 ATCGACTCGGCGAGATCGA 60.595 57.895 39.07 39.07 44.26 3.59
2208 2300 0.951525 ATCGACTCGGCGAGATCGAT 60.952 55.000 39.49 39.49 44.26 3.59
2209 2301 1.439529 CGACTCGGCGAGATCGATG 60.440 63.158 40.35 19.21 43.02 3.84
2210 2302 1.081774 GACTCGGCGAGATCGATGG 60.082 63.158 40.35 15.23 43.02 3.51
2211 2303 2.429907 CTCGGCGAGATCGATGGC 60.430 66.667 32.07 3.13 43.02 4.40
2215 2307 4.982795 GCGAGATCGATGGCGCGA 62.983 66.667 20.91 0.00 45.22 5.87
2216 2308 2.798675 CGAGATCGATGGCGCGAG 60.799 66.667 12.10 0.00 44.26 5.03
2238 2330 3.741476 GCCAGCGGCCTTGTTCTG 61.741 66.667 0.00 0.00 44.06 3.02
2239 2331 3.058160 CCAGCGGCCTTGTTCTGG 61.058 66.667 0.00 5.85 39.95 3.86
2247 2339 2.938354 CCTTGTTCTGGCACTCCTG 58.062 57.895 0.00 0.00 0.00 3.86
2248 2340 1.239968 CCTTGTTCTGGCACTCCTGC 61.240 60.000 0.00 0.00 43.41 4.85
2249 2341 0.250640 CTTGTTCTGGCACTCCTGCT 60.251 55.000 0.00 0.00 43.66 4.24
2250 2342 0.535780 TTGTTCTGGCACTCCTGCTG 60.536 55.000 0.00 0.00 43.66 4.41
2251 2343 2.033141 TTCTGGCACTCCTGCTGC 59.967 61.111 0.00 0.00 43.66 5.25
2252 2344 2.523285 TTCTGGCACTCCTGCTGCT 61.523 57.895 0.00 0.00 43.66 4.24
2253 2345 2.436292 CTGGCACTCCTGCTGCTC 60.436 66.667 0.00 0.00 43.66 4.26
2254 2346 4.383861 TGGCACTCCTGCTGCTCG 62.384 66.667 0.00 0.00 43.66 5.03
2255 2347 4.385405 GGCACTCCTGCTGCTCGT 62.385 66.667 0.00 0.00 43.66 4.18
2256 2348 2.813042 GCACTCCTGCTGCTCGTC 60.813 66.667 0.00 0.00 40.63 4.20
2257 2349 2.969016 CACTCCTGCTGCTCGTCT 59.031 61.111 0.00 0.00 0.00 4.18
2258 2350 1.291588 CACTCCTGCTGCTCGTCTT 59.708 57.895 0.00 0.00 0.00 3.01
2259 2351 0.735632 CACTCCTGCTGCTCGTCTTC 60.736 60.000 0.00 0.00 0.00 2.87
2260 2352 1.153667 CTCCTGCTGCTCGTCTTCC 60.154 63.158 0.00 0.00 0.00 3.46
2261 2353 2.507992 CCTGCTGCTCGTCTTCCG 60.508 66.667 0.00 0.00 38.13 4.30
2262 2354 2.507992 CTGCTGCTCGTCTTCCGG 60.508 66.667 0.00 0.00 37.11 5.14
2263 2355 4.742201 TGCTGCTCGTCTTCCGGC 62.742 66.667 0.00 0.00 37.11 6.13
2264 2356 4.443266 GCTGCTCGTCTTCCGGCT 62.443 66.667 0.00 0.00 37.11 5.52
2265 2357 2.262915 CTGCTCGTCTTCCGGCTT 59.737 61.111 0.00 0.00 37.11 4.35
2266 2358 2.048222 TGCTCGTCTTCCGGCTTG 60.048 61.111 0.00 0.00 37.11 4.01
2267 2359 3.491652 GCTCGTCTTCCGGCTTGC 61.492 66.667 0.00 0.00 37.11 4.01
2268 2360 2.262915 CTCGTCTTCCGGCTTGCT 59.737 61.111 0.00 0.00 37.11 3.91
2269 2361 2.048222 TCGTCTTCCGGCTTGCTG 60.048 61.111 0.00 0.00 37.11 4.41
2270 2362 2.357517 CGTCTTCCGGCTTGCTGT 60.358 61.111 0.00 0.00 0.00 4.40
2271 2363 2.383527 CGTCTTCCGGCTTGCTGTC 61.384 63.158 0.00 0.00 0.00 3.51
2272 2364 1.301716 GTCTTCCGGCTTGCTGTCA 60.302 57.895 0.00 0.00 0.00 3.58
2273 2365 1.004560 TCTTCCGGCTTGCTGTCAG 60.005 57.895 0.00 0.00 0.00 3.51
2274 2366 2.669569 TTCCGGCTTGCTGTCAGC 60.670 61.111 18.32 18.32 42.82 4.26
2283 2375 3.490890 GCTGTCAGCAACGATCCC 58.509 61.111 20.16 0.00 41.89 3.85
2284 2376 2.456119 GCTGTCAGCAACGATCCCG 61.456 63.158 20.16 0.00 41.89 5.14
2285 2377 1.215382 CTGTCAGCAACGATCCCGA 59.785 57.895 0.00 0.00 39.50 5.14
2286 2378 1.078759 CTGTCAGCAACGATCCCGAC 61.079 60.000 0.00 0.00 39.50 4.79
2287 2379 2.158959 GTCAGCAACGATCCCGACG 61.159 63.158 0.00 0.00 39.50 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 75 2.022520 CCGAGGATGACGACGATGA 58.977 57.895 0.00 0.00 0.00 2.92
71 76 1.658717 GCCGAGGATGACGACGATG 60.659 63.158 0.00 0.00 0.00 3.84
72 77 2.722487 GCCGAGGATGACGACGAT 59.278 61.111 0.00 0.00 0.00 3.73
112 117 4.208686 GGAGCCAGGCCGTCGTAG 62.209 72.222 8.22 0.00 0.00 3.51
244 255 3.644265 TGCAAGTACAAGAACTACTGGGA 59.356 43.478 0.00 0.00 0.00 4.37
459 474 1.007336 CCGGACCAAGTTCGAGAACG 61.007 60.000 0.00 0.04 45.50 3.95
488 503 2.027100 GGACTTTCTTCCTCGGGTGAAT 60.027 50.000 0.00 0.00 32.24 2.57
505 520 0.988678 GGGGTATTGGCTGGAGGACT 60.989 60.000 0.00 0.00 0.00 3.85
507 522 0.551377 TTGGGGTATTGGCTGGAGGA 60.551 55.000 0.00 0.00 0.00 3.71
650 677 2.380249 TCACTCTTCTCCTCCTCTCCAA 59.620 50.000 0.00 0.00 0.00 3.53
752 787 0.179089 CACCTCATTGCTCTCCTCGG 60.179 60.000 0.00 0.00 0.00 4.63
879 938 2.038813 TCCTCCATGCCCTCGTCA 59.961 61.111 0.00 0.00 0.00 4.35
905 970 1.890041 TAGTTGCGGCGCTTGTTGT 60.890 52.632 33.26 13.50 0.00 3.32
925 990 0.339859 TCCTCCTGATGGTAGTGGCT 59.660 55.000 0.00 0.00 34.23 4.75
1317 1390 8.367156 ACCATAAACATAAACAGTTCAAAGCAT 58.633 29.630 0.00 0.00 0.00 3.79
1366 1439 5.683876 AGTTCAGATAAGCAGTACCACAT 57.316 39.130 0.00 0.00 0.00 3.21
1387 1462 8.081633 CAGAGGATCAACTACTTAAGAGCATAG 58.918 40.741 10.09 2.93 37.82 2.23
1546 1621 1.202867 TGGTTGCCTGCATGTTAGTGA 60.203 47.619 0.00 0.00 0.00 3.41
1612 1703 1.331756 GCCTCAAATGTACCATCTGCG 59.668 52.381 0.00 0.00 0.00 5.18
1712 1804 7.410120 AGATTATTCTCCCAACATCAAAACC 57.590 36.000 0.00 0.00 0.00 3.27
1721 1813 3.181478 ACCGACGAGATTATTCTCCCAAC 60.181 47.826 8.66 0.00 44.76 3.77
1722 1814 3.028850 ACCGACGAGATTATTCTCCCAA 58.971 45.455 8.66 0.00 44.76 4.12
1723 1815 2.361119 CACCGACGAGATTATTCTCCCA 59.639 50.000 8.66 0.00 44.76 4.37
1724 1816 2.361438 ACACCGACGAGATTATTCTCCC 59.639 50.000 8.66 1.76 44.76 4.30
1725 1817 3.181489 ACACACCGACGAGATTATTCTCC 60.181 47.826 8.66 0.00 44.76 3.71
1726 1818 3.791887 CACACACCGACGAGATTATTCTC 59.208 47.826 0.00 4.80 44.24 2.87
1727 1819 3.192844 ACACACACCGACGAGATTATTCT 59.807 43.478 0.00 0.00 33.88 2.40
1728 1820 3.303495 CACACACACCGACGAGATTATTC 59.697 47.826 0.00 0.00 0.00 1.75
1729 1821 3.250744 CACACACACCGACGAGATTATT 58.749 45.455 0.00 0.00 0.00 1.40
1730 1822 2.416836 CCACACACACCGACGAGATTAT 60.417 50.000 0.00 0.00 0.00 1.28
1731 1823 1.068125 CCACACACACCGACGAGATTA 60.068 52.381 0.00 0.00 0.00 1.75
1732 1824 0.319555 CCACACACACCGACGAGATT 60.320 55.000 0.00 0.00 0.00 2.40
1733 1825 1.289066 CCACACACACCGACGAGAT 59.711 57.895 0.00 0.00 0.00 2.75
1734 1826 2.725641 CCACACACACCGACGAGA 59.274 61.111 0.00 0.00 0.00 4.04
1735 1827 2.355837 CCCACACACACCGACGAG 60.356 66.667 0.00 0.00 0.00 4.18
1736 1828 3.141522 GACCCACACACACCGACGA 62.142 63.158 0.00 0.00 0.00 4.20
1737 1829 2.660552 GACCCACACACACCGACG 60.661 66.667 0.00 0.00 0.00 5.12
1738 1830 2.502093 TGACCCACACACACCGAC 59.498 61.111 0.00 0.00 0.00 4.79
1747 1839 4.822896 GGTTTGTATTACAAGTGACCCACA 59.177 41.667 14.21 0.00 39.53 4.17
1748 1840 5.067954 AGGTTTGTATTACAAGTGACCCAC 58.932 41.667 18.77 9.69 39.53 4.61
1749 1841 5.313280 AGGTTTGTATTACAAGTGACCCA 57.687 39.130 18.77 0.00 39.53 4.51
1750 1842 7.933215 AATAGGTTTGTATTACAAGTGACCC 57.067 36.000 18.77 11.47 39.53 4.46
1751 1843 9.836076 GAAAATAGGTTTGTATTACAAGTGACC 57.164 33.333 16.24 16.24 39.53 4.02
1752 1844 9.836076 GGAAAATAGGTTTGTATTACAAGTGAC 57.164 33.333 9.10 5.55 39.53 3.67
1753 1845 9.802039 AGGAAAATAGGTTTGTATTACAAGTGA 57.198 29.630 9.10 0.00 39.53 3.41
1783 1875 9.485206 GCAAAAGATTTGCCTCATATATTGATT 57.515 29.630 15.12 0.00 39.38 2.57
1797 1889 2.438868 AACGGAGGCAAAAGATTTGC 57.561 45.000 17.18 17.18 44.22 3.68
1798 1890 6.836577 TTTTAAACGGAGGCAAAAGATTTG 57.163 33.333 0.00 0.00 0.00 2.32
1823 1915 8.507249 GCTCATCACTTACTAAAGTTGTCATTT 58.493 33.333 0.00 0.00 43.60 2.32
1824 1916 7.880195 AGCTCATCACTTACTAAAGTTGTCATT 59.120 33.333 0.00 0.00 43.60 2.57
1825 1917 7.332926 CAGCTCATCACTTACTAAAGTTGTCAT 59.667 37.037 0.00 0.00 43.60 3.06
1826 1918 6.646653 CAGCTCATCACTTACTAAAGTTGTCA 59.353 38.462 0.00 0.00 43.60 3.58
1827 1919 6.091441 CCAGCTCATCACTTACTAAAGTTGTC 59.909 42.308 0.00 0.00 43.60 3.18
1828 1920 5.934625 CCAGCTCATCACTTACTAAAGTTGT 59.065 40.000 0.00 0.00 43.60 3.32
1829 1921 6.166279 TCCAGCTCATCACTTACTAAAGTTG 58.834 40.000 0.00 0.00 43.60 3.16
1830 1922 6.211584 TCTCCAGCTCATCACTTACTAAAGTT 59.788 38.462 0.00 0.00 43.60 2.66
1832 1924 6.214191 TCTCCAGCTCATCACTTACTAAAG 57.786 41.667 0.00 0.00 38.77 1.85
1833 1925 6.381133 TCATCTCCAGCTCATCACTTACTAAA 59.619 38.462 0.00 0.00 0.00 1.85
1834 1926 5.893824 TCATCTCCAGCTCATCACTTACTAA 59.106 40.000 0.00 0.00 0.00 2.24
1835 1927 5.449553 TCATCTCCAGCTCATCACTTACTA 58.550 41.667 0.00 0.00 0.00 1.82
1836 1928 4.285020 TCATCTCCAGCTCATCACTTACT 58.715 43.478 0.00 0.00 0.00 2.24
1837 1929 4.340666 TCTCATCTCCAGCTCATCACTTAC 59.659 45.833 0.00 0.00 0.00 2.34
1838 1930 4.540715 TCTCATCTCCAGCTCATCACTTA 58.459 43.478 0.00 0.00 0.00 2.24
1839 1931 3.372897 TCTCATCTCCAGCTCATCACTT 58.627 45.455 0.00 0.00 0.00 3.16
1840 1932 3.029483 TCTCATCTCCAGCTCATCACT 57.971 47.619 0.00 0.00 0.00 3.41
1841 1933 3.321396 TCATCTCATCTCCAGCTCATCAC 59.679 47.826 0.00 0.00 0.00 3.06
1842 1934 3.573695 TCATCTCATCTCCAGCTCATCA 58.426 45.455 0.00 0.00 0.00 3.07
1843 1935 4.202233 TGTTCATCTCATCTCCAGCTCATC 60.202 45.833 0.00 0.00 0.00 2.92
1844 1936 3.710165 TGTTCATCTCATCTCCAGCTCAT 59.290 43.478 0.00 0.00 0.00 2.90
1845 1937 3.102204 TGTTCATCTCATCTCCAGCTCA 58.898 45.455 0.00 0.00 0.00 4.26
1846 1938 3.384146 TCTGTTCATCTCATCTCCAGCTC 59.616 47.826 0.00 0.00 0.00 4.09
1847 1939 3.372897 TCTGTTCATCTCATCTCCAGCT 58.627 45.455 0.00 0.00 0.00 4.24
1848 1940 3.815856 TCTGTTCATCTCATCTCCAGC 57.184 47.619 0.00 0.00 0.00 4.85
1849 1941 5.341872 AGTTCTGTTCATCTCATCTCCAG 57.658 43.478 0.00 0.00 0.00 3.86
1850 1942 5.716703 TGTAGTTCTGTTCATCTCATCTCCA 59.283 40.000 0.00 0.00 0.00 3.86
1851 1943 6.039616 GTGTAGTTCTGTTCATCTCATCTCC 58.960 44.000 0.00 0.00 0.00 3.71
1852 1944 6.625362 TGTGTAGTTCTGTTCATCTCATCTC 58.375 40.000 0.00 0.00 0.00 2.75
1853 1945 6.596309 TGTGTAGTTCTGTTCATCTCATCT 57.404 37.500 0.00 0.00 0.00 2.90
1854 1946 6.091441 GGTTGTGTAGTTCTGTTCATCTCATC 59.909 42.308 0.00 0.00 0.00 2.92
1855 1947 5.934625 GGTTGTGTAGTTCTGTTCATCTCAT 59.065 40.000 0.00 0.00 0.00 2.90
1856 1948 5.070446 AGGTTGTGTAGTTCTGTTCATCTCA 59.930 40.000 0.00 0.00 0.00 3.27
1857 1949 5.542779 AGGTTGTGTAGTTCTGTTCATCTC 58.457 41.667 0.00 0.00 0.00 2.75
1858 1950 5.552870 AGGTTGTGTAGTTCTGTTCATCT 57.447 39.130 0.00 0.00 0.00 2.90
1859 1951 7.724305 TTTAGGTTGTGTAGTTCTGTTCATC 57.276 36.000 0.00 0.00 0.00 2.92
1860 1952 9.959721 ATATTTAGGTTGTGTAGTTCTGTTCAT 57.040 29.630 0.00 0.00 0.00 2.57
1885 1977 9.956720 GTGATGCTTAAAGATGCAAATTACTAT 57.043 29.630 0.00 0.00 42.74 2.12
1886 1978 8.405531 GGTGATGCTTAAAGATGCAAATTACTA 58.594 33.333 0.00 0.00 42.74 1.82
1887 1979 7.260603 GGTGATGCTTAAAGATGCAAATTACT 58.739 34.615 0.00 0.00 42.74 2.24
1888 1980 6.476706 GGGTGATGCTTAAAGATGCAAATTAC 59.523 38.462 0.00 0.00 42.74 1.89
1889 1981 6.154192 TGGGTGATGCTTAAAGATGCAAATTA 59.846 34.615 0.00 0.00 42.74 1.40
1890 1982 5.046448 TGGGTGATGCTTAAAGATGCAAATT 60.046 36.000 0.00 0.00 42.74 1.82
1891 1983 4.467082 TGGGTGATGCTTAAAGATGCAAAT 59.533 37.500 0.00 0.00 42.74 2.32
1892 1984 3.831333 TGGGTGATGCTTAAAGATGCAAA 59.169 39.130 0.00 0.00 42.74 3.68
1893 1985 3.429492 TGGGTGATGCTTAAAGATGCAA 58.571 40.909 0.00 0.00 42.74 4.08
1894 1986 3.018856 CTGGGTGATGCTTAAAGATGCA 58.981 45.455 0.00 0.00 43.67 3.96
1895 1987 3.019564 ACTGGGTGATGCTTAAAGATGC 58.980 45.455 0.00 0.00 0.00 3.91
1896 1988 5.431765 AGTACTGGGTGATGCTTAAAGATG 58.568 41.667 0.00 0.00 0.00 2.90
1897 1989 5.700402 AGTACTGGGTGATGCTTAAAGAT 57.300 39.130 0.00 0.00 0.00 2.40
1898 1990 5.499004 AAGTACTGGGTGATGCTTAAAGA 57.501 39.130 0.00 0.00 0.00 2.52
1899 1991 6.407202 AGTAAGTACTGGGTGATGCTTAAAG 58.593 40.000 0.00 0.00 34.72 1.85
1900 1992 6.368779 AGTAAGTACTGGGTGATGCTTAAA 57.631 37.500 0.00 0.00 34.72 1.52
1901 1993 7.670605 ATAGTAAGTACTGGGTGATGCTTAA 57.329 36.000 0.00 0.00 37.10 1.85
1902 1994 7.039923 GCTATAGTAAGTACTGGGTGATGCTTA 60.040 40.741 0.00 0.00 37.10 3.09
1903 1995 6.239345 GCTATAGTAAGTACTGGGTGATGCTT 60.239 42.308 0.00 0.00 37.10 3.91
1904 1996 5.244178 GCTATAGTAAGTACTGGGTGATGCT 59.756 44.000 0.00 0.00 37.10 3.79
1905 1997 5.010719 TGCTATAGTAAGTACTGGGTGATGC 59.989 44.000 0.00 0.00 37.10 3.91
1906 1998 6.650427 TGCTATAGTAAGTACTGGGTGATG 57.350 41.667 0.00 0.00 37.10 3.07
1907 1999 6.238953 CGTTGCTATAGTAAGTACTGGGTGAT 60.239 42.308 3.22 0.00 37.10 3.06
1908 2000 5.066893 CGTTGCTATAGTAAGTACTGGGTGA 59.933 44.000 3.22 0.00 37.10 4.02
1909 2001 5.279384 CGTTGCTATAGTAAGTACTGGGTG 58.721 45.833 3.22 0.00 37.10 4.61
1910 2002 4.202090 GCGTTGCTATAGTAAGTACTGGGT 60.202 45.833 3.22 0.00 37.10 4.51
1911 2003 4.202080 TGCGTTGCTATAGTAAGTACTGGG 60.202 45.833 3.22 0.00 37.10 4.45
1912 2004 4.928601 TGCGTTGCTATAGTAAGTACTGG 58.071 43.478 3.22 0.00 37.10 4.00
1913 2005 6.206498 TGATGCGTTGCTATAGTAAGTACTG 58.794 40.000 3.22 0.00 37.10 2.74
1914 2006 6.387041 TGATGCGTTGCTATAGTAAGTACT 57.613 37.500 3.22 0.00 40.24 2.73
1915 2007 7.169308 ACAATGATGCGTTGCTATAGTAAGTAC 59.831 37.037 3.22 0.00 34.08 2.73
1916 2008 7.207383 ACAATGATGCGTTGCTATAGTAAGTA 58.793 34.615 3.22 0.00 34.08 2.24
1917 2009 6.049149 ACAATGATGCGTTGCTATAGTAAGT 58.951 36.000 3.22 0.00 34.08 2.24
1918 2010 6.346919 GGACAATGATGCGTTGCTATAGTAAG 60.347 42.308 3.22 0.45 34.08 2.34
1919 2011 5.465390 GGACAATGATGCGTTGCTATAGTAA 59.535 40.000 0.00 0.00 34.08 2.24
1920 2012 4.988540 GGACAATGATGCGTTGCTATAGTA 59.011 41.667 0.84 0.00 34.08 1.82
1921 2013 3.809832 GGACAATGATGCGTTGCTATAGT 59.190 43.478 0.84 0.00 34.08 2.12
1922 2014 3.187227 GGGACAATGATGCGTTGCTATAG 59.813 47.826 0.00 0.00 34.08 1.31
1923 2015 3.138304 GGGACAATGATGCGTTGCTATA 58.862 45.455 0.00 0.00 34.08 1.31
1924 2016 1.949525 GGGACAATGATGCGTTGCTAT 59.050 47.619 0.00 0.00 34.08 2.97
1925 2017 1.339535 TGGGACAATGATGCGTTGCTA 60.340 47.619 0.00 0.00 34.08 3.49
1926 2018 0.608856 TGGGACAATGATGCGTTGCT 60.609 50.000 0.00 0.00 34.08 3.91
1927 2019 0.179156 CTGGGACAATGATGCGTTGC 60.179 55.000 0.00 0.00 38.70 4.17
1928 2020 1.452110 TCTGGGACAATGATGCGTTG 58.548 50.000 0.00 0.00 38.70 4.10
1929 2021 2.425143 ATCTGGGACAATGATGCGTT 57.575 45.000 0.00 0.00 38.70 4.84
1930 2022 2.292267 GAATCTGGGACAATGATGCGT 58.708 47.619 0.00 0.00 38.70 5.24
1931 2023 1.605710 GGAATCTGGGACAATGATGCG 59.394 52.381 0.00 0.00 38.70 4.73
1932 2024 2.621998 CTGGAATCTGGGACAATGATGC 59.378 50.000 0.00 0.00 38.70 3.91
1933 2025 3.630769 CACTGGAATCTGGGACAATGATG 59.369 47.826 0.00 0.00 38.70 3.07
1934 2026 3.372349 CCACTGGAATCTGGGACAATGAT 60.372 47.826 0.00 0.00 38.70 2.45
1935 2027 2.025981 CCACTGGAATCTGGGACAATGA 60.026 50.000 0.00 0.00 38.70 2.57
1936 2028 2.025981 TCCACTGGAATCTGGGACAATG 60.026 50.000 0.00 0.00 38.70 2.82
1937 2029 2.278245 TCCACTGGAATCTGGGACAAT 58.722 47.619 0.00 0.00 38.70 2.71
1938 2030 1.741028 TCCACTGGAATCTGGGACAA 58.259 50.000 0.00 0.00 38.70 3.18
1939 2031 1.741028 TTCCACTGGAATCTGGGACA 58.259 50.000 6.39 0.00 36.71 4.02
1940 2032 2.224769 TGTTTCCACTGGAATCTGGGAC 60.225 50.000 11.47 6.27 41.71 4.46
1941 2033 2.061848 TGTTTCCACTGGAATCTGGGA 58.938 47.619 11.47 0.00 41.71 4.37
1942 2034 2.584835 TGTTTCCACTGGAATCTGGG 57.415 50.000 11.47 0.00 41.71 4.45
1943 2035 5.473066 AATTTGTTTCCACTGGAATCTGG 57.527 39.130 11.47 0.00 41.71 3.86
1944 2036 6.863126 GTGTAATTTGTTTCCACTGGAATCTG 59.137 38.462 11.47 0.00 41.71 2.90
1945 2037 6.015434 GGTGTAATTTGTTTCCACTGGAATCT 60.015 38.462 11.47 0.00 41.71 2.40
1946 2038 6.156519 GGTGTAATTTGTTTCCACTGGAATC 58.843 40.000 11.47 11.10 41.71 2.52
1947 2039 5.600484 TGGTGTAATTTGTTTCCACTGGAAT 59.400 36.000 11.47 0.00 41.71 3.01
1948 2040 4.956700 TGGTGTAATTTGTTTCCACTGGAA 59.043 37.500 6.39 6.39 40.27 3.53
1949 2041 4.537751 TGGTGTAATTTGTTTCCACTGGA 58.462 39.130 0.00 0.00 0.00 3.86
1950 2042 4.795962 GCTGGTGTAATTTGTTTCCACTGG 60.796 45.833 0.00 0.00 0.00 4.00
1951 2043 4.037923 AGCTGGTGTAATTTGTTTCCACTG 59.962 41.667 0.00 0.00 0.00 3.66
1952 2044 4.215109 AGCTGGTGTAATTTGTTTCCACT 58.785 39.130 0.00 0.00 0.00 4.00
1953 2045 4.584327 AGCTGGTGTAATTTGTTTCCAC 57.416 40.909 0.00 0.00 0.00 4.02
1954 2046 5.184864 CCATAGCTGGTGTAATTTGTTTCCA 59.815 40.000 0.00 0.00 37.79 3.53
1955 2047 5.650543 CCATAGCTGGTGTAATTTGTTTCC 58.349 41.667 0.00 0.00 37.79 3.13
1956 2048 5.102313 GCCATAGCTGGTGTAATTTGTTTC 58.898 41.667 0.00 0.00 45.10 2.78
1957 2049 5.072040 GCCATAGCTGGTGTAATTTGTTT 57.928 39.130 0.00 0.00 45.10 2.83
1958 2050 4.718940 GCCATAGCTGGTGTAATTTGTT 57.281 40.909 0.00 0.00 45.10 2.83
1972 2064 4.020218 TGGGTATGAGATTACAGCCATAGC 60.020 45.833 0.00 0.00 38.52 2.97
1973 2065 5.482908 GTGGGTATGAGATTACAGCCATAG 58.517 45.833 0.00 0.00 0.00 2.23
1974 2066 4.286032 GGTGGGTATGAGATTACAGCCATA 59.714 45.833 0.00 0.00 0.00 2.74
1975 2067 3.073062 GGTGGGTATGAGATTACAGCCAT 59.927 47.826 0.00 0.00 0.00 4.40
1976 2068 2.438021 GGTGGGTATGAGATTACAGCCA 59.562 50.000 0.00 0.00 0.00 4.75
1977 2069 2.706190 AGGTGGGTATGAGATTACAGCC 59.294 50.000 0.00 0.00 0.00 4.85
1978 2070 4.423625 AAGGTGGGTATGAGATTACAGC 57.576 45.455 0.00 0.00 0.00 4.40
1979 2071 6.986817 CAGTTAAGGTGGGTATGAGATTACAG 59.013 42.308 0.00 0.00 0.00 2.74
1980 2072 6.126883 CCAGTTAAGGTGGGTATGAGATTACA 60.127 42.308 0.00 0.00 0.00 2.41
1981 2073 6.126854 ACCAGTTAAGGTGGGTATGAGATTAC 60.127 42.308 8.37 0.00 41.30 1.89
1982 2074 5.968167 ACCAGTTAAGGTGGGTATGAGATTA 59.032 40.000 8.37 0.00 41.30 1.75
1983 2075 4.788617 ACCAGTTAAGGTGGGTATGAGATT 59.211 41.667 8.37 0.00 41.30 2.40
1984 2076 4.371681 ACCAGTTAAGGTGGGTATGAGAT 58.628 43.478 8.37 0.00 41.30 2.75
1985 2077 3.798515 ACCAGTTAAGGTGGGTATGAGA 58.201 45.455 8.37 0.00 41.30 3.27
1986 2078 5.687166 TTACCAGTTAAGGTGGGTATGAG 57.313 43.478 8.37 0.00 43.14 2.90
1987 2079 6.012333 ACATTTACCAGTTAAGGTGGGTATGA 60.012 38.462 15.08 0.00 43.14 2.15
1988 2080 6.184789 ACATTTACCAGTTAAGGTGGGTATG 58.815 40.000 8.37 9.61 43.14 2.39
1989 2081 6.397217 ACATTTACCAGTTAAGGTGGGTAT 57.603 37.500 8.37 0.00 43.14 2.73
1990 2082 5.280624 GGACATTTACCAGTTAAGGTGGGTA 60.281 44.000 8.37 0.00 43.14 3.69
1991 2083 4.507869 GGACATTTACCAGTTAAGGTGGGT 60.508 45.833 8.37 0.00 43.14 4.51
1992 2084 4.014406 GGACATTTACCAGTTAAGGTGGG 58.986 47.826 8.37 0.00 43.14 4.61
1993 2085 4.658063 TGGACATTTACCAGTTAAGGTGG 58.342 43.478 2.70 2.70 43.14 4.61
1994 2086 5.880054 CTGGACATTTACCAGTTAAGGTG 57.120 43.478 0.00 0.00 46.71 4.00
2003 2095 3.057969 CAGCAGACTGGACATTTACCA 57.942 47.619 4.26 0.00 40.48 3.25
2015 2107 7.161404 TCAGTCAATAAAATGTACAGCAGACT 58.839 34.615 0.33 5.09 33.32 3.24
2016 2108 7.364522 TCAGTCAATAAAATGTACAGCAGAC 57.635 36.000 0.33 2.91 0.00 3.51
2017 2109 7.661437 AGTTCAGTCAATAAAATGTACAGCAGA 59.339 33.333 0.33 0.00 0.00 4.26
2018 2110 7.810658 AGTTCAGTCAATAAAATGTACAGCAG 58.189 34.615 0.33 0.00 0.00 4.24
2019 2111 7.744087 AGTTCAGTCAATAAAATGTACAGCA 57.256 32.000 0.33 0.00 0.00 4.41
2030 2122 9.502091 AGCAAGTGTAATAAGTTCAGTCAATAA 57.498 29.630 0.00 0.00 0.00 1.40
2032 2124 7.986085 AGCAAGTGTAATAAGTTCAGTCAAT 57.014 32.000 0.00 0.00 0.00 2.57
2033 2125 7.929245 TGTAGCAAGTGTAATAAGTTCAGTCAA 59.071 33.333 0.00 0.00 0.00 3.18
2034 2126 7.438564 TGTAGCAAGTGTAATAAGTTCAGTCA 58.561 34.615 0.00 0.00 0.00 3.41
2035 2127 7.884816 TGTAGCAAGTGTAATAAGTTCAGTC 57.115 36.000 0.00 0.00 0.00 3.51
2036 2128 7.931948 AGTTGTAGCAAGTGTAATAAGTTCAGT 59.068 33.333 0.00 0.00 0.00 3.41
2037 2129 8.223769 CAGTTGTAGCAAGTGTAATAAGTTCAG 58.776 37.037 8.15 0.00 0.00 3.02
2038 2130 7.713507 ACAGTTGTAGCAAGTGTAATAAGTTCA 59.286 33.333 17.53 0.00 32.47 3.18
2039 2131 8.084590 ACAGTTGTAGCAAGTGTAATAAGTTC 57.915 34.615 17.53 0.00 32.47 3.01
2040 2132 8.446599 AACAGTTGTAGCAAGTGTAATAAGTT 57.553 30.769 18.82 3.38 33.75 2.66
2041 2133 8.446599 AAACAGTTGTAGCAAGTGTAATAAGT 57.553 30.769 18.82 3.96 33.75 2.24
2045 2137 8.227791 CGAATAAACAGTTGTAGCAAGTGTAAT 58.772 33.333 18.82 13.76 33.75 1.89
2046 2138 7.307514 CCGAATAAACAGTTGTAGCAAGTGTAA 60.308 37.037 18.82 12.47 33.75 2.41
2047 2139 6.146510 CCGAATAAACAGTTGTAGCAAGTGTA 59.853 38.462 18.82 8.25 33.75 2.90
2048 2140 5.049680 CCGAATAAACAGTTGTAGCAAGTGT 60.050 40.000 14.41 14.41 35.48 3.55
2049 2141 5.049680 ACCGAATAAACAGTTGTAGCAAGTG 60.050 40.000 13.29 13.29 0.00 3.16
2050 2142 5.049680 CACCGAATAAACAGTTGTAGCAAGT 60.050 40.000 0.00 0.00 0.00 3.16
2051 2143 5.382303 CACCGAATAAACAGTTGTAGCAAG 58.618 41.667 0.00 0.00 0.00 4.01
2052 2144 4.319911 GCACCGAATAAACAGTTGTAGCAA 60.320 41.667 0.00 0.00 0.00 3.91
2053 2145 3.187637 GCACCGAATAAACAGTTGTAGCA 59.812 43.478 0.00 0.00 0.00 3.49
2054 2146 3.187637 TGCACCGAATAAACAGTTGTAGC 59.812 43.478 0.00 0.00 0.00 3.58
2055 2147 4.669197 GCTGCACCGAATAAACAGTTGTAG 60.669 45.833 0.00 0.00 0.00 2.74
2056 2148 3.187637 GCTGCACCGAATAAACAGTTGTA 59.812 43.478 0.00 0.00 0.00 2.41
2057 2149 2.031157 GCTGCACCGAATAAACAGTTGT 60.031 45.455 0.00 0.00 0.00 3.32
2058 2150 2.031245 TGCTGCACCGAATAAACAGTTG 60.031 45.455 0.00 0.00 0.00 3.16
2059 2151 2.226330 TGCTGCACCGAATAAACAGTT 58.774 42.857 0.00 0.00 0.00 3.16
2060 2152 1.890876 TGCTGCACCGAATAAACAGT 58.109 45.000 0.00 0.00 0.00 3.55
2061 2153 2.987413 TTGCTGCACCGAATAAACAG 57.013 45.000 0.00 0.00 0.00 3.16
2062 2154 2.881513 TCTTTGCTGCACCGAATAAACA 59.118 40.909 0.00 0.00 0.00 2.83
2063 2155 3.552604 TCTTTGCTGCACCGAATAAAC 57.447 42.857 0.00 0.00 0.00 2.01
2064 2156 3.305064 GGTTCTTTGCTGCACCGAATAAA 60.305 43.478 0.00 0.00 0.00 1.40
2065 2157 2.227865 GGTTCTTTGCTGCACCGAATAA 59.772 45.455 0.00 0.00 0.00 1.40
2066 2158 1.810151 GGTTCTTTGCTGCACCGAATA 59.190 47.619 0.00 0.00 0.00 1.75
2067 2159 0.598065 GGTTCTTTGCTGCACCGAAT 59.402 50.000 0.00 0.00 0.00 3.34
2068 2160 1.452145 GGGTTCTTTGCTGCACCGAA 61.452 55.000 0.00 5.22 0.00 4.30
2069 2161 1.896660 GGGTTCTTTGCTGCACCGA 60.897 57.895 0.00 0.00 0.00 4.69
2070 2162 2.192861 TGGGTTCTTTGCTGCACCG 61.193 57.895 0.00 0.00 0.00 4.94
2071 2163 1.363807 GTGGGTTCTTTGCTGCACC 59.636 57.895 0.00 0.00 0.00 5.01
2072 2164 0.031178 CTGTGGGTTCTTTGCTGCAC 59.969 55.000 0.00 0.00 0.00 4.57
2073 2165 1.737355 GCTGTGGGTTCTTTGCTGCA 61.737 55.000 0.00 0.00 0.00 4.41
2074 2166 1.006922 GCTGTGGGTTCTTTGCTGC 60.007 57.895 0.00 0.00 0.00 5.25
2075 2167 0.746063 TTGCTGTGGGTTCTTTGCTG 59.254 50.000 0.00 0.00 0.00 4.41
2076 2168 1.136891 GTTTGCTGTGGGTTCTTTGCT 59.863 47.619 0.00 0.00 0.00 3.91
2077 2169 1.134848 TGTTTGCTGTGGGTTCTTTGC 60.135 47.619 0.00 0.00 0.00 3.68
2078 2170 2.539476 GTGTTTGCTGTGGGTTCTTTG 58.461 47.619 0.00 0.00 0.00 2.77
2079 2171 1.134175 CGTGTTTGCTGTGGGTTCTTT 59.866 47.619 0.00 0.00 0.00 2.52
2080 2172 0.738389 CGTGTTTGCTGTGGGTTCTT 59.262 50.000 0.00 0.00 0.00 2.52
2081 2173 1.724582 GCGTGTTTGCTGTGGGTTCT 61.725 55.000 0.00 0.00 0.00 3.01
2082 2174 1.299089 GCGTGTTTGCTGTGGGTTC 60.299 57.895 0.00 0.00 0.00 3.62
2083 2175 2.049185 TGCGTGTTTGCTGTGGGTT 61.049 52.632 0.00 0.00 35.36 4.11
2084 2176 2.439338 TGCGTGTTTGCTGTGGGT 60.439 55.556 0.00 0.00 35.36 4.51
2085 2177 2.026014 GTGCGTGTTTGCTGTGGG 59.974 61.111 0.00 0.00 35.36 4.61
2086 2178 2.352229 CGTGCGTGTTTGCTGTGG 60.352 61.111 0.00 0.00 35.36 4.17
2087 2179 3.018428 GCGTGCGTGTTTGCTGTG 61.018 61.111 0.00 0.00 35.36 3.66
2088 2180 3.168237 GAGCGTGCGTGTTTGCTGT 62.168 57.895 0.00 0.00 37.91 4.40
2089 2181 2.425773 GAGCGTGCGTGTTTGCTG 60.426 61.111 0.00 0.00 37.91 4.41
2090 2182 2.588877 AGAGCGTGCGTGTTTGCT 60.589 55.556 0.00 0.00 41.11 3.91
2091 2183 1.827315 TACAGAGCGTGCGTGTTTGC 61.827 55.000 7.96 0.00 0.00 3.68
2092 2184 0.161658 CTACAGAGCGTGCGTGTTTG 59.838 55.000 7.96 0.49 0.00 2.93
2093 2185 0.944311 CCTACAGAGCGTGCGTGTTT 60.944 55.000 7.96 0.00 0.00 2.83
2094 2186 1.372997 CCTACAGAGCGTGCGTGTT 60.373 57.895 7.96 0.00 0.00 3.32
2095 2187 2.258591 CCTACAGAGCGTGCGTGT 59.741 61.111 7.80 7.80 0.00 4.49
2096 2188 1.801913 GACCTACAGAGCGTGCGTG 60.802 63.158 0.00 0.00 0.00 5.34
2097 2189 1.924320 GAGACCTACAGAGCGTGCGT 61.924 60.000 0.00 0.00 0.00 5.24
2098 2190 1.226435 GAGACCTACAGAGCGTGCG 60.226 63.158 0.00 0.00 0.00 5.34
2099 2191 0.179150 CAGAGACCTACAGAGCGTGC 60.179 60.000 0.00 0.00 0.00 5.34
2100 2192 0.179150 GCAGAGACCTACAGAGCGTG 60.179 60.000 0.00 0.00 0.00 5.34
2101 2193 1.316706 GGCAGAGACCTACAGAGCGT 61.317 60.000 0.00 0.00 0.00 5.07
2102 2194 1.315981 TGGCAGAGACCTACAGAGCG 61.316 60.000 0.00 0.00 0.00 5.03
2103 2195 0.174617 GTGGCAGAGACCTACAGAGC 59.825 60.000 0.00 0.00 0.00 4.09
2104 2196 0.453793 CGTGGCAGAGACCTACAGAG 59.546 60.000 0.00 0.00 0.00 3.35
2105 2197 0.965866 CCGTGGCAGAGACCTACAGA 60.966 60.000 0.00 0.00 0.00 3.41
2106 2198 1.513158 CCGTGGCAGAGACCTACAG 59.487 63.158 0.00 0.00 0.00 2.74
2107 2199 1.982395 CCCGTGGCAGAGACCTACA 60.982 63.158 0.00 0.00 0.00 2.74
2108 2200 2.893398 CCCGTGGCAGAGACCTAC 59.107 66.667 0.00 0.00 0.00 3.18
2154 2246 1.401552 CCGATGTGTAGGGCATGTTTG 59.598 52.381 0.00 0.00 0.00 2.93
2155 2247 1.280710 TCCGATGTGTAGGGCATGTTT 59.719 47.619 0.00 0.00 0.00 2.83
2156 2248 0.908910 TCCGATGTGTAGGGCATGTT 59.091 50.000 0.00 0.00 0.00 2.71
2157 2249 0.465705 CTCCGATGTGTAGGGCATGT 59.534 55.000 0.00 0.00 0.00 3.21
2158 2250 0.752658 TCTCCGATGTGTAGGGCATG 59.247 55.000 0.00 0.00 0.00 4.06
2159 2251 1.496060 TTCTCCGATGTGTAGGGCAT 58.504 50.000 0.00 0.00 0.00 4.40
2160 2252 1.271856 TTTCTCCGATGTGTAGGGCA 58.728 50.000 0.00 0.00 0.00 5.36
2161 2253 2.484889 GATTTCTCCGATGTGTAGGGC 58.515 52.381 0.00 0.00 0.00 5.19
2162 2254 2.434336 TGGATTTCTCCGATGTGTAGGG 59.566 50.000 0.00 0.00 45.37 3.53
2163 2255 3.493350 CCTGGATTTCTCCGATGTGTAGG 60.493 52.174 0.00 0.00 45.37 3.18
2164 2256 3.384789 TCCTGGATTTCTCCGATGTGTAG 59.615 47.826 0.00 0.00 45.37 2.74
2165 2257 3.371034 TCCTGGATTTCTCCGATGTGTA 58.629 45.455 0.00 0.00 45.37 2.90
2166 2258 2.187958 TCCTGGATTTCTCCGATGTGT 58.812 47.619 0.00 0.00 45.37 3.72
2167 2259 2.939103 GTTCCTGGATTTCTCCGATGTG 59.061 50.000 0.00 0.00 45.37 3.21
2168 2260 2.571653 TGTTCCTGGATTTCTCCGATGT 59.428 45.455 0.00 0.00 45.37 3.06
2169 2261 3.266510 TGTTCCTGGATTTCTCCGATG 57.733 47.619 0.00 0.00 45.37 3.84
2170 2262 3.493350 CGATGTTCCTGGATTTCTCCGAT 60.493 47.826 0.00 0.00 45.37 4.18
2171 2263 2.159099 CGATGTTCCTGGATTTCTCCGA 60.159 50.000 0.00 0.00 45.37 4.55
2172 2264 2.159099 TCGATGTTCCTGGATTTCTCCG 60.159 50.000 0.00 0.00 45.37 4.63
2173 2265 3.118592 AGTCGATGTTCCTGGATTTCTCC 60.119 47.826 0.00 0.00 42.45 3.71
2174 2266 4.116238 GAGTCGATGTTCCTGGATTTCTC 58.884 47.826 0.00 0.00 0.00 2.87
2175 2267 3.429547 CGAGTCGATGTTCCTGGATTTCT 60.430 47.826 6.73 0.00 0.00 2.52
2176 2268 2.860735 CGAGTCGATGTTCCTGGATTTC 59.139 50.000 6.73 0.00 0.00 2.17
2177 2269 2.418746 CCGAGTCGATGTTCCTGGATTT 60.419 50.000 15.64 0.00 0.00 2.17
2178 2270 1.137086 CCGAGTCGATGTTCCTGGATT 59.863 52.381 15.64 0.00 0.00 3.01
2179 2271 0.747255 CCGAGTCGATGTTCCTGGAT 59.253 55.000 15.64 0.00 0.00 3.41
2180 2272 1.945354 GCCGAGTCGATGTTCCTGGA 61.945 60.000 15.64 0.00 0.00 3.86
2181 2273 1.519455 GCCGAGTCGATGTTCCTGG 60.519 63.158 15.64 0.00 0.00 4.45
2182 2274 1.874019 CGCCGAGTCGATGTTCCTG 60.874 63.158 15.64 0.00 0.00 3.86
2183 2275 1.994507 CTCGCCGAGTCGATGTTCCT 61.995 60.000 15.64 0.00 37.87 3.36
2184 2276 1.586564 CTCGCCGAGTCGATGTTCC 60.587 63.158 15.64 0.00 37.87 3.62
2185 2277 0.029567 ATCTCGCCGAGTCGATGTTC 59.970 55.000 15.64 0.00 37.87 3.18
2186 2278 0.029567 GATCTCGCCGAGTCGATGTT 59.970 55.000 15.64 0.00 37.87 2.71
2187 2279 1.649815 GATCTCGCCGAGTCGATGT 59.350 57.895 15.64 0.00 37.87 3.06
2188 2280 1.439529 CGATCTCGCCGAGTCGATG 60.440 63.158 24.54 5.84 36.28 3.84
2189 2281 0.951525 ATCGATCTCGCCGAGTCGAT 60.952 55.000 30.48 30.48 42.17 3.59
2190 2282 1.594564 ATCGATCTCGCCGAGTCGA 60.595 57.895 29.39 29.39 41.85 4.20
2191 2283 1.439529 CATCGATCTCGCCGAGTCG 60.440 63.158 23.54 23.54 39.55 4.18
2192 2284 1.081774 CCATCGATCTCGCCGAGTC 60.082 63.158 14.64 9.92 39.55 3.36
2193 2285 3.034878 CCATCGATCTCGCCGAGT 58.965 61.111 14.64 1.19 39.55 4.18
2194 2286 2.429907 GCCATCGATCTCGCCGAG 60.430 66.667 8.05 8.05 39.55 4.63
2195 2287 4.328231 CGCCATCGATCTCGCCGA 62.328 66.667 0.00 0.00 40.53 5.54
2198 2290 4.982795 TCGCGCCATCGATCTCGC 62.983 66.667 23.29 23.29 43.62 5.03
2199 2291 2.798675 CTCGCGCCATCGATCTCG 60.799 66.667 0.00 10.48 37.87 4.04
2200 2292 3.102668 GCTCGCGCCATCGATCTC 61.103 66.667 0.00 0.00 37.87 2.75
2201 2293 4.990389 CGCTCGCGCCATCGATCT 62.990 66.667 0.00 0.00 37.87 2.75
2202 2294 4.982795 TCGCTCGCGCCATCGATC 62.983 66.667 0.00 0.00 37.87 3.69
2203 2295 4.990389 CTCGCTCGCGCCATCGAT 62.990 66.667 0.00 0.00 37.87 3.59
2222 2314 3.058160 CCAGAACAAGGCCGCTGG 61.058 66.667 14.22 14.22 41.62 4.85
2223 2315 3.741476 GCCAGAACAAGGCCGCTG 61.741 66.667 0.00 0.85 46.50 5.18
2229 2321 1.239968 GCAGGAGTGCCAGAACAAGG 61.240 60.000 0.00 0.00 44.72 3.61
2230 2322 2.251600 GCAGGAGTGCCAGAACAAG 58.748 57.895 0.00 0.00 44.72 3.16
2231 2323 4.481195 GCAGGAGTGCCAGAACAA 57.519 55.556 0.00 0.00 44.72 2.83
2240 2332 0.735632 GAAGACGAGCAGCAGGAGTG 60.736 60.000 0.00 0.00 0.00 3.51
2241 2333 1.589113 GAAGACGAGCAGCAGGAGT 59.411 57.895 0.00 0.00 0.00 3.85
2242 2334 1.153667 GGAAGACGAGCAGCAGGAG 60.154 63.158 0.00 0.00 0.00 3.69
2243 2335 2.973899 GGAAGACGAGCAGCAGGA 59.026 61.111 0.00 0.00 0.00 3.86
2253 2345 2.357517 ACAGCAAGCCGGAAGACG 60.358 61.111 5.05 0.00 43.80 4.18
2254 2346 1.294659 CTGACAGCAAGCCGGAAGAC 61.295 60.000 5.05 0.00 0.00 3.01
2255 2347 1.004560 CTGACAGCAAGCCGGAAGA 60.005 57.895 5.05 0.00 0.00 2.87
2256 2348 2.684843 GCTGACAGCAAGCCGGAAG 61.685 63.158 22.62 0.00 41.89 3.46
2257 2349 2.669569 GCTGACAGCAAGCCGGAA 60.670 61.111 22.62 0.00 41.89 4.30
2266 2358 2.456119 CGGGATCGTTGCTGACAGC 61.456 63.158 20.86 20.86 42.82 4.40
2267 2359 1.078759 GTCGGGATCGTTGCTGACAG 61.079 60.000 18.75 0.00 45.95 3.51
2268 2360 1.080093 GTCGGGATCGTTGCTGACA 60.080 57.895 18.75 0.00 45.95 3.58
2269 2361 2.158959 CGTCGGGATCGTTGCTGAC 61.159 63.158 14.93 14.93 43.92 3.51
2270 2362 2.180769 CGTCGGGATCGTTGCTGA 59.819 61.111 0.00 0.00 37.69 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.