Multiple sequence alignment - TraesCS2D01G147300

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BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G147300 chr2D 100.000 5108 0 0 1 5108 88286866 88291973 0.000000e+00 9433.0
1 TraesCS2D01G147300 chr2D 100.000 2982 0 0 5561 8542 88292426 88295407 0.000000e+00 5507.0
2 TraesCS2D01G147300 chr2D 92.294 1090 41 20 5597 6676 559300406 559299350 0.000000e+00 1507.0
3 TraesCS2D01G147300 chr2D 96.349 630 21 2 4476 5104 559301563 559300935 0.000000e+00 1035.0
4 TraesCS2D01G147300 chr2D 94.099 627 27 4 4472 5089 569252189 569252814 0.000000e+00 944.0
5 TraesCS2D01G147300 chr2D 91.903 247 19 1 4858 5104 21106090 21106335 2.280000e-90 344.0
6 TraesCS2D01G147300 chr2D 93.035 201 14 0 7071 7271 88293837 88294037 2.330000e-75 294.0
7 TraesCS2D01G147300 chr2D 93.035 201 14 0 6972 7172 88293936 88294136 2.330000e-75 294.0
8 TraesCS2D01G147300 chr2D 91.176 170 12 3 3183 3352 79056326 79056160 2.400000e-55 228.0
9 TraesCS2D01G147300 chr2D 80.984 305 21 12 405 674 558242528 558242226 3.130000e-49 207.0
10 TraesCS2D01G147300 chr2D 84.141 227 19 7 424 634 316289976 316290201 4.040000e-48 204.0
11 TraesCS2D01G147300 chr2D 78.247 308 28 9 406 674 35027981 35028288 2.470000e-35 161.0
12 TraesCS2D01G147300 chr2D 93.458 107 3 3 2906 3009 88289664 88289769 1.150000e-33 156.0
13 TraesCS2D01G147300 chr2D 93.458 107 3 3 2799 2904 88289771 88289874 1.150000e-33 156.0
14 TraesCS2D01G147300 chr2D 85.034 147 17 3 4255 4396 547238898 547239044 2.490000e-30 145.0
15 TraesCS2D01G147300 chr2D 90.385 52 3 2 2286 2336 644868142 644868192 5.530000e-07 67.6
16 TraesCS2D01G147300 chr2A 93.402 2895 88 36 737 3578 88661648 88664492 0.000000e+00 4193.0
17 TraesCS2D01G147300 chr2A 96.937 914 19 3 6683 7587 88670724 88671637 0.000000e+00 1524.0
18 TraesCS2D01G147300 chr2A 92.243 593 36 3 5561 6150 72379926 72379341 0.000000e+00 832.0
19 TraesCS2D01G147300 chr2A 98.253 458 8 0 3581 4038 88669524 88669981 0.000000e+00 802.0
20 TraesCS2D01G147300 chr2A 97.511 442 6 2 4038 4478 88670294 88670731 0.000000e+00 750.0
21 TraesCS2D01G147300 chr2A 81.637 855 101 24 3586 4396 41162199 41161357 0.000000e+00 658.0
22 TraesCS2D01G147300 chr2A 95.833 192 7 1 645 836 88661592 88661782 8.330000e-80 309.0
23 TraesCS2D01G147300 chr2A 90.643 171 13 3 3183 3353 79316164 79315997 3.100000e-54 224.0
24 TraesCS2D01G147300 chr2A 92.523 107 7 1 2799 2904 88663805 88663911 1.490000e-32 152.0
25 TraesCS2D01G147300 chr2A 93.137 102 4 2 2906 3004 88663699 88663800 6.910000e-31 147.0
26 TraesCS2D01G147300 chr2A 83.654 104 15 2 1835 1938 88669778 88669879 7.060000e-16 97.1
27 TraesCS2D01G147300 chr2B 96.151 1637 25 7 933 2540 141559004 141560631 0.000000e+00 2639.0
28 TraesCS2D01G147300 chr2B 94.717 1060 28 14 2540 3578 141561513 141562565 0.000000e+00 1622.0
29 TraesCS2D01G147300 chr2B 97.998 899 15 3 3581 4478 141563121 141564017 0.000000e+00 1557.0
30 TraesCS2D01G147300 chr2B 96.078 918 23 3 6683 7587 141564010 141564927 0.000000e+00 1483.0
31 TraesCS2D01G147300 chr2B 90.135 963 64 15 7587 8542 116273575 116272637 0.000000e+00 1223.0
32 TraesCS2D01G147300 chr2B 92.537 335 25 0 46 380 141534864 141535198 1.670000e-131 481.0
33 TraesCS2D01G147300 chr2B 83.221 298 34 9 3821 4104 672333311 672333016 8.510000e-65 259.0
34 TraesCS2D01G147300 chr2B 79.926 269 27 14 674 927 579961315 579961571 1.140000e-38 172.0
35 TraesCS2D01G147300 chr2B 92.308 104 8 0 3581 3684 672333436 672333333 1.920000e-31 148.0
36 TraesCS2D01G147300 chr2B 93.137 102 4 3 2906 3004 141561772 141561873 6.910000e-31 147.0
37 TraesCS2D01G147300 chr2B 86.364 110 6 2 2799 2899 141561878 141561987 2.520000e-20 111.0
38 TraesCS2D01G147300 chr2B 84.615 104 14 2 1835 1938 141563375 141563476 1.520000e-17 102.0
39 TraesCS2D01G147300 chr3D 95.543 1077 44 3 5603 6676 415663917 415662842 0.000000e+00 1720.0
40 TraesCS2D01G147300 chr3D 94.234 659 30 5 6023 6675 337659641 337658985 0.000000e+00 1000.0
41 TraesCS2D01G147300 chr3D 93.027 631 23 2 4474 5104 415664964 415664355 0.000000e+00 902.0
42 TraesCS2D01G147300 chr3D 92.989 542 37 1 4476 5016 135254649 135255190 0.000000e+00 789.0
43 TraesCS2D01G147300 chr3D 84.016 513 49 15 3581 4062 497491455 497490945 6.040000e-126 462.0
44 TraesCS2D01G147300 chr3D 93.038 158 10 1 3190 3347 288550458 288550614 6.670000e-56 230.0
45 TraesCS2D01G147300 chr3D 92.308 156 11 1 3190 3344 347585233 347585388 4.010000e-53 220.0
46 TraesCS2D01G147300 chr3D 90.798 163 14 1 3183 3345 322435451 322435290 5.190000e-52 217.0
47 TraesCS2D01G147300 chr3D 91.250 160 11 3 3191 3348 315480578 315480420 1.870000e-51 215.0
48 TraesCS2D01G147300 chr3D 82.117 274 24 10 406 655 480421168 480420896 2.420000e-50 211.0
49 TraesCS2D01G147300 chr3D 80.072 276 23 12 404 654 427057069 427056801 8.810000e-40 176.0
50 TraesCS2D01G147300 chr3D 78.906 256 33 12 406 642 31402652 31402399 4.130000e-33 154.0
51 TraesCS2D01G147300 chr7D 93.800 1129 51 6 5561 6676 581388327 581387205 0.000000e+00 1679.0
52 TraesCS2D01G147300 chr7D 93.989 1048 44 8 5635 6676 296506501 296505467 0.000000e+00 1568.0
53 TraesCS2D01G147300 chr7D 95.747 964 31 5 7587 8542 558182775 558181814 0.000000e+00 1544.0
54 TraesCS2D01G147300 chr7D 94.770 631 27 6 4476 5102 581388970 581388342 0.000000e+00 977.0
55 TraesCS2D01G147300 chr7D 94.937 158 7 1 3190 3347 436961795 436961951 6.620000e-61 246.0
56 TraesCS2D01G147300 chr7D 92.857 154 10 1 3190 3343 593035315 593035163 1.120000e-53 222.0
57 TraesCS2D01G147300 chr7D 90.854 164 12 3 3190 3351 74596194 74596032 5.190000e-52 217.0
58 TraesCS2D01G147300 chr7D 90.798 163 14 1 3190 3352 197927008 197927169 5.190000e-52 217.0
59 TraesCS2D01G147300 chr7D 89.017 173 18 1 3190 3362 375400916 375400745 6.720000e-51 213.0
60 TraesCS2D01G147300 chr7D 89.744 78 4 1 717 794 94211398 94211325 7.060000e-16 97.1
61 TraesCS2D01G147300 chr7D 84.946 93 6 5 702 794 94211378 94211294 4.250000e-13 87.9
62 TraesCS2D01G147300 chr7D 91.667 48 3 1 2289 2336 2666238 2666284 1.990000e-06 65.8
63 TraesCS2D01G147300 chr5D 94.722 1042 51 3 5638 6676 230976389 230975349 0.000000e+00 1616.0
64 TraesCS2D01G147300 chr5D 89.592 1153 63 23 1028 2135 530424514 530425654 0.000000e+00 1411.0
65 TraesCS2D01G147300 chr5D 88.864 907 68 14 3581 4468 530426468 530427360 0.000000e+00 1085.0
66 TraesCS2D01G147300 chr5D 94.402 661 30 5 6023 6676 263148239 263148899 0.000000e+00 1009.0
67 TraesCS2D01G147300 chr5D 94.266 593 25 1 4476 5059 230977333 230976741 0.000000e+00 898.0
68 TraesCS2D01G147300 chr5D 91.481 493 38 2 6684 7172 530427362 530427854 0.000000e+00 675.0
69 TraesCS2D01G147300 chr5D 86.667 360 44 4 7071 7428 530427654 530428011 6.210000e-106 396.0
70 TraesCS2D01G147300 chr5D 83.333 282 27 10 410 673 174279225 174279504 8.570000e-60 243.0
71 TraesCS2D01G147300 chr5D 82.492 297 26 13 405 676 399997652 399997357 3.990000e-58 237.0
72 TraesCS2D01G147300 chr5D 86.614 127 11 4 7455 7580 530428071 530428192 1.500000e-27 135.0
73 TraesCS2D01G147300 chr5D 97.143 35 0 1 2283 2317 35828575 35828608 3.330000e-04 58.4
74 TraesCS2D01G147300 chr4D 93.681 1092 39 11 5591 6676 14993729 14994796 0.000000e+00 1607.0
75 TraesCS2D01G147300 chr4D 92.593 621 37 4 4476 5089 311909638 311909020 0.000000e+00 883.0
76 TraesCS2D01G147300 chr4D 91.346 624 35 12 4476 5087 472669859 472669243 0.000000e+00 835.0
77 TraesCS2D01G147300 chr4D 92.593 162 12 0 3182 3343 74079512 74079351 5.160000e-57 233.0
78 TraesCS2D01G147300 chr4D 90.323 155 12 3 3190 3343 335774436 335774284 5.230000e-47 200.0
79 TraesCS2D01G147300 chr4D 82.128 235 36 2 405 634 485493726 485493959 6.760000e-46 196.0
80 TraesCS2D01G147300 chr4D 89.610 154 15 1 3190 3343 420141016 420141168 2.430000e-45 195.0
81 TraesCS2D01G147300 chr4D 89.032 155 16 1 3190 3344 82727680 82727527 3.150000e-44 191.0
82 TraesCS2D01G147300 chr4D 87.273 165 17 4 3190 3352 341693403 341693241 1.460000e-42 185.0
83 TraesCS2D01G147300 chr4D 79.928 279 27 12 406 655 113170187 113170465 2.450000e-40 178.0
84 TraesCS2D01G147300 chr4D 80.292 274 22 15 405 648 375650416 375650687 2.450000e-40 178.0
85 TraesCS2D01G147300 chr4D 79.848 263 18 9 406 657 111552631 111552869 8.880000e-35 159.0
86 TraesCS2D01G147300 chr4D 85.047 107 11 2 406 507 12412294 12412400 4.220000e-18 104.0
87 TraesCS2D01G147300 chr4D 100.000 33 0 0 2289 2321 213332165 213332197 2.570000e-05 62.1
88 TraesCS2D01G147300 chr4D 93.023 43 1 1 2279 2321 493836151 493836191 2.570000e-05 62.1
89 TraesCS2D01G147300 chr4D 84.483 58 8 1 620 677 39240681 39240625 1.000000e-03 56.5
90 TraesCS2D01G147300 chr4D 100.000 30 0 0 2288 2317 134540461 134540432 1.000000e-03 56.5
91 TraesCS2D01G147300 chr1D 96.680 964 23 4 7587 8542 412179144 412178182 0.000000e+00 1594.0
92 TraesCS2D01G147300 chr1D 93.086 593 31 3 5561 6150 212715004 212715589 0.000000e+00 859.0
93 TraesCS2D01G147300 chr1D 91.213 569 39 7 4531 5097 297166892 297167451 0.000000e+00 763.0
94 TraesCS2D01G147300 chr1D 82.353 833 97 22 3581 4375 399354009 399354829 0.000000e+00 678.0
95 TraesCS2D01G147300 chr1D 81.330 857 102 26 3586 4396 97777446 97776602 2.010000e-180 643.0
96 TraesCS2D01G147300 chr1D 84.836 244 18 11 681 910 459896083 459895845 2.400000e-55 228.0
97 TraesCS2D01G147300 chr1D 91.875 160 10 3 3185 3344 7349700 7349856 4.010000e-53 220.0
98 TraesCS2D01G147300 chr1D 82.593 270 28 6 422 673 240118995 240119263 4.010000e-53 220.0
99 TraesCS2D01G147300 chr1D 89.759 166 15 2 3190 3354 156133339 156133503 2.420000e-50 211.0
100 TraesCS2D01G147300 chr1D 81.949 277 20 13 405 652 188464206 188464481 3.130000e-49 207.0
101 TraesCS2D01G147300 chr1D 81.560 282 21 14 404 655 393034972 393035252 4.040000e-48 204.0
102 TraesCS2D01G147300 chr1D 88.750 160 17 1 3190 3349 471593832 471593674 2.430000e-45 195.0
103 TraesCS2D01G147300 chr1D 80.000 280 22 16 406 654 386375762 386376038 8.810000e-40 176.0
104 TraesCS2D01G147300 chr1D 80.321 249 27 8 404 630 445570272 445570024 1.470000e-37 169.0
105 TraesCS2D01G147300 chr1D 88.991 109 12 0 422 530 55887021 55887129 1.500000e-27 135.0
106 TraesCS2D01G147300 chr1D 76.512 281 28 15 410 654 431964218 431964496 1.510000e-22 119.0
107 TraesCS2D01G147300 chr1D 82.796 93 8 6 702 794 78088212 78088128 9.190000e-10 76.8
108 TraesCS2D01G147300 chr1D 88.235 51 5 1 2289 2339 6369874 6369923 9.260000e-05 60.2
109 TraesCS2D01G147300 chr1D 100.000 32 0 0 2288 2319 468194013 468194044 9.260000e-05 60.2
110 TraesCS2D01G147300 chr5B 88.813 1314 82 34 1028 2289 669670037 669671337 0.000000e+00 1552.0
111 TraesCS2D01G147300 chr5B 88.268 912 76 16 3581 4477 669671682 669672577 0.000000e+00 1062.0
112 TraesCS2D01G147300 chr5B 89.109 505 41 6 7071 7563 669672854 669673356 4.380000e-172 616.0
113 TraesCS2D01G147300 chr5B 89.293 495 37 7 6683 7172 669672571 669673054 2.640000e-169 606.0
114 TraesCS2D01G147300 chr5B 90.476 168 12 4 3190 3357 176588228 176588391 1.440000e-52 219.0
115 TraesCS2D01G147300 chr5B 78.007 291 27 14 422 676 482293300 482293011 1.920000e-31 148.0
116 TraesCS2D01G147300 chr5B 84.354 147 17 4 4255 4396 455278846 455278991 1.160000e-28 139.0
117 TraesCS2D01G147300 chr5B 91.860 86 7 0 3747 3832 669671938 669672023 4.190000e-23 121.0
118 TraesCS2D01G147300 chr5B 88.119 101 12 0 6973 7073 669672954 669673054 4.190000e-23 121.0
119 TraesCS2D01G147300 chr5A 91.763 947 44 12 1028 1948 658670231 658671169 0.000000e+00 1286.0
120 TraesCS2D01G147300 chr5A 88.974 916 65 15 3581 4477 658672037 658672935 0.000000e+00 1099.0
121 TraesCS2D01G147300 chr5A 91.896 617 30 7 4476 5089 229765193 229765792 0.000000e+00 845.0
122 TraesCS2D01G147300 chr5A 94.428 341 18 1 6833 7172 658673028 658673368 2.730000e-144 523.0
123 TraesCS2D01G147300 chr5A 88.022 359 34 2 7071 7428 658673168 658673518 4.770000e-112 416.0
124 TraesCS2D01G147300 chr5A 91.975 162 11 2 3184 3344 86662178 86662018 8.630000e-55 226.0
125 TraesCS2D01G147300 chr5A 82.375 261 35 4 406 655 641747232 641746972 5.190000e-52 217.0
126 TraesCS2D01G147300 chr5A 97.059 102 3 0 6972 7073 658673267 658673368 1.140000e-38 172.0
127 TraesCS2D01G147300 chr5A 100.000 36 0 0 2288 2323 344342687 344342722 5.530000e-07 67.6
128 TraesCS2D01G147300 chr4A 94.021 669 30 7 6024 6684 17977287 17977953 0.000000e+00 1005.0
129 TraesCS2D01G147300 chr4A 92.545 550 34 6 4476 5020 381226107 381225560 0.000000e+00 782.0
130 TraesCS2D01G147300 chr4A 86.058 208 18 4 404 601 48526158 48526364 6.720000e-51 213.0
131 TraesCS2D01G147300 chr4A 84.354 147 18 3 4255 4396 615524930 615525076 1.160000e-28 139.0
132 TraesCS2D01G147300 chr4A 100.000 36 0 0 2289 2324 397861322 397861287 5.530000e-07 67.6
133 TraesCS2D01G147300 chr7A 93.155 599 26 5 5561 6150 167262903 167262311 0.000000e+00 865.0
134 TraesCS2D01G147300 chr7A 94.304 158 8 1 3190 3347 486929940 486930096 3.080000e-59 241.0
135 TraesCS2D01G147300 chr6D 92.759 580 32 3 5561 6137 20198551 20197979 0.000000e+00 830.0
136 TraesCS2D01G147300 chr6D 81.544 298 24 18 405 673 323051436 323051141 5.190000e-52 217.0
137 TraesCS2D01G147300 chr6D 89.937 159 14 2 3190 3347 303060007 303059850 4.040000e-48 204.0
138 TraesCS2D01G147300 chr6D 80.392 306 24 16 403 673 423083041 423083345 5.230000e-47 200.0
139 TraesCS2D01G147300 chr6D 88.957 163 15 2 3190 3352 356594218 356594059 1.880000e-46 198.0
140 TraesCS2D01G147300 chr6D 91.971 137 10 1 3207 3343 221843011 221843146 3.150000e-44 191.0
141 TraesCS2D01G147300 chr6D 88.961 154 15 2 3190 3343 320698231 320698080 1.130000e-43 189.0
142 TraesCS2D01G147300 chr6D 87.975 158 17 2 3186 3343 256728605 256728450 1.460000e-42 185.0
143 TraesCS2D01G147300 chr6D 87.975 158 17 2 3186 3343 256729402 256729247 1.460000e-42 185.0
144 TraesCS2D01G147300 chr6D 80.282 284 20 15 406 654 100600615 100600333 1.890000e-41 182.0
145 TraesCS2D01G147300 chr6D 78.878 303 24 14 404 673 428619271 428619566 1.470000e-37 169.0
146 TraesCS2D01G147300 chr6D 79.298 285 21 16 406 654 411556340 411556622 1.910000e-36 165.0
147 TraesCS2D01G147300 chr6D 96.667 60 1 1 405 463 812957 812898 1.960000e-16 99.0
148 TraesCS2D01G147300 chr6D 96.970 33 1 0 2288 2320 24033664 24033632 1.000000e-03 56.5
149 TraesCS2D01G147300 chr6D 96.970 33 1 0 2288 2320 329080284 329080252 1.000000e-03 56.5
150 TraesCS2D01G147300 chr6D 100.000 29 0 0 2289 2317 329857492 329857520 4.000000e-03 54.7
151 TraesCS2D01G147300 chr6D 100.000 29 0 0 2289 2317 367991011 367991039 4.000000e-03 54.7
152 TraesCS2D01G147300 chr6D 100.000 29 0 0 2289 2317 395332175 395332203 4.000000e-03 54.7
153 TraesCS2D01G147300 chr6D 100.000 29 0 0 2289 2317 470407791 470407819 4.000000e-03 54.7
154 TraesCS2D01G147300 chr6A 91.568 593 37 6 5561 6147 122686517 122687102 0.000000e+00 806.0
155 TraesCS2D01G147300 chr6A 81.893 856 97 28 3586 4396 207841253 207840411 0.000000e+00 669.0
156 TraesCS2D01G147300 chr6A 82.226 602 72 17 3583 4153 614472868 614473465 3.580000e-133 486.0
157 TraesCS2D01G147300 chr6A 81.229 602 78 16 3583 4153 598684081 598684678 3.640000e-123 453.0
158 TraesCS2D01G147300 chr6A 80.420 286 25 13 402 657 417487903 417487619 1.130000e-43 189.0
159 TraesCS2D01G147300 chr6A 97.436 39 0 1 2285 2323 550721856 550721893 1.990000e-06 65.8
160 TraesCS2D01G147300 chr7B 81.192 856 102 28 3586 4396 114144719 114143878 1.210000e-177 634.0
161 TraesCS2D01G147300 chr7B 94.937 158 7 1 3190 3347 453623290 453623446 6.620000e-61 246.0
162 TraesCS2D01G147300 chr7B 91.824 159 11 2 3190 3348 155471319 155471163 4.010000e-53 220.0
163 TraesCS2D01G147300 chr7B 89.017 173 18 1 3190 3362 369872871 369872700 6.720000e-51 213.0
164 TraesCS2D01G147300 chr7B 80.843 261 26 9 405 642 24005444 24005185 5.270000e-42 183.0
165 TraesCS2D01G147300 chr7B 81.081 259 23 10 401 634 586179772 586179515 5.270000e-42 183.0
166 TraesCS2D01G147300 chr7B 97.222 36 1 0 2288 2323 123310104 123310069 2.570000e-05 62.1
167 TraesCS2D01G147300 chr7B 92.683 41 2 1 2289 2328 33809030 33809070 3.330000e-04 58.4
168 TraesCS2D01G147300 chr3A 82.618 466 59 18 3948 4394 637283448 637283910 8.040000e-105 392.0
169 TraesCS2D01G147300 chr3A 84.848 165 16 4 524 680 52197175 52197338 3.190000e-34 158.0
170 TraesCS2D01G147300 chr3A 83.099 71 6 6 2289 2356 689337427 689337494 9.260000e-05 60.2
171 TraesCS2D01G147300 chr6B 82.373 295 36 11 3821 4101 519221653 519221945 8.570000e-60 243.0
172 TraesCS2D01G147300 chr6B 83.523 176 19 6 410 576 64201212 64201386 1.150000e-33 156.0
173 TraesCS2D01G147300 chr6B 90.385 104 10 0 3581 3684 519221528 519221631 4.160000e-28 137.0
174 TraesCS2D01G147300 chr6B 94.872 39 2 0 2289 2327 563062912 563062874 2.570000e-05 62.1
175 TraesCS2D01G147300 chr6B 94.872 39 1 1 2285 2323 299961344 299961307 9.260000e-05 60.2
176 TraesCS2D01G147300 chr6B 94.872 39 1 1 2289 2327 632814433 632814470 9.260000e-05 60.2
177 TraesCS2D01G147300 chr3B 90.964 166 13 2 3183 3347 328715604 328715440 1.120000e-53 222.0
178 TraesCS2D01G147300 chr3B 80.090 221 26 12 4100 4312 657539470 657539260 1.920000e-31 148.0
179 TraesCS2D01G147300 chr3B 85.714 147 11 7 3909 4046 657541200 657541055 6.910000e-31 147.0
180 TraesCS2D01G147300 chr3B 95.122 41 2 0 2288 2328 277026487 277026447 1.990000e-06 65.8
181 TraesCS2D01G147300 chr1A 90.798 163 13 2 3190 3351 155857859 155857698 5.190000e-52 217.0
182 TraesCS2D01G147300 chr1A 91.613 155 11 2 3190 3343 298614248 298614401 6.720000e-51 213.0
183 TraesCS2D01G147300 chr1A 95.122 123 4 2 720 841 551611081 551610960 8.750000e-45 193.0
184 TraesCS2D01G147300 chr1A 80.287 279 26 11 401 655 385669915 385670188 5.270000e-42 183.0
185 TraesCS2D01G147300 chr1A 79.211 279 32 11 422 676 555644788 555645064 4.100000e-38 171.0
186 TraesCS2D01G147300 chr1A 80.000 240 29 7 422 642 59512467 59512228 8.880000e-35 159.0
187 TraesCS2D01G147300 chr1A 79.412 238 24 10 406 642 547297628 547297415 2.490000e-30 145.0
188 TraesCS2D01G147300 chr1A 100.000 31 0 0 2289 2319 27378100 27378130 3.330000e-04 58.4
189 TraesCS2D01G147300 chr1A 100.000 31 0 0 2289 2319 332051613 332051583 3.330000e-04 58.4
190 TraesCS2D01G147300 chr1A 92.308 39 2 1 2279 2317 546328984 546329021 4.000000e-03 54.7
191 TraesCS2D01G147300 chr1A 94.444 36 1 1 2285 2320 547002317 547002283 4.000000e-03 54.7
192 TraesCS2D01G147300 chr4B 90.361 166 11 5 3192 3357 510827662 510827822 6.720000e-51 213.0
193 TraesCS2D01G147300 chr4B 91.558 154 12 1 3190 3343 106227561 106227409 2.420000e-50 211.0
194 TraesCS2D01G147300 chr4B 89.759 166 13 4 3190 3354 510849249 510849087 8.690000e-50 209.0
195 TraesCS2D01G147300 chr4B 90.566 159 12 3 3189 3347 483582140 483581985 3.130000e-49 207.0
196 TraesCS2D01G147300 chr4B 89.157 166 16 2 3183 3348 658773057 658773220 1.120000e-48 206.0
197 TraesCS2D01G147300 chr4B 79.924 264 20 16 422 655 659385952 659385692 6.860000e-36 163.0
198 TraesCS2D01G147300 chr4B 90.090 111 8 3 556 666 191650556 191650663 3.210000e-29 141.0
199 TraesCS2D01G147300 chr4B 77.407 270 30 14 403 642 6934473 6934741 1.930000e-26 132.0
200 TraesCS2D01G147300 chr4B 100.000 34 0 0 2288 2321 258738039 258738072 7.160000e-06 63.9
201 TraesCS2D01G147300 chr4B 100.000 34 0 0 2288 2321 387804554 387804587 7.160000e-06 63.9
202 TraesCS2D01G147300 chr4B 100.000 33 0 0 2289 2321 69147516 69147548 2.570000e-05 62.1
203 TraesCS2D01G147300 chr1B 85.000 220 17 13 681 894 632007572 632007363 8.690000e-50 209.0
204 TraesCS2D01G147300 chr1B 82.927 246 15 13 725 961 173133144 173132917 6.760000e-46 196.0
205 TraesCS2D01G147300 chrUn 90.968 155 13 1 3190 3344 96471030 96471183 3.130000e-49 207.0
206 TraesCS2D01G147300 chrUn 90.260 154 14 1 3190 3343 126680478 126680630 5.230000e-47 200.0
207 TraesCS2D01G147300 chrUn 90.667 150 13 1 3194 3343 50619843 50619991 1.880000e-46 198.0
208 TraesCS2D01G147300 chrUn 88.125 160 18 1 3192 3351 81694230 81694072 1.130000e-43 189.0
209 TraesCS2D01G147300 chrUn 85.882 170 19 4 3183 3352 277499567 277499731 8.810000e-40 176.0
210 TraesCS2D01G147300 chrUn 80.303 264 24 12 404 642 23672513 23672773 3.170000e-39 174.0
211 TraesCS2D01G147300 chrUn 86.928 153 17 3 3191 3343 40642977 40642828 1.470000e-37 169.0
212 TraesCS2D01G147300 chrUn 86.928 153 17 3 3191 3343 319944400 319944251 1.470000e-37 169.0
213 TraesCS2D01G147300 chrUn 88.722 133 13 2 3209 3341 12585659 12585789 2.470000e-35 161.0
214 TraesCS2D01G147300 chrUn 79.487 273 20 13 405 648 255617640 255617905 2.470000e-35 161.0
215 TraesCS2D01G147300 chrUn 79.211 279 22 13 405 654 445390559 445390288 2.470000e-35 161.0
216 TraesCS2D01G147300 chrUn 81.595 163 21 6 3189 3343 90452953 90453114 9.000000e-25 126.0
217 TraesCS2D01G147300 chrUn 76.512 281 27 18 406 647 48395166 48395446 5.420000e-22 117.0
218 TraesCS2D01G147300 chrUn 92.105 76 1 1 403 473 2934924 2934999 1.520000e-17 102.0
219 TraesCS2D01G147300 chrUn 85.714 98 13 1 557 653 346548210 346548307 1.520000e-17 102.0
220 TraesCS2D01G147300 chrUn 91.667 72 5 1 402 473 256594198 256594128 1.960000e-16 99.0
221 TraesCS2D01G147300 chrUn 100.000 30 0 0 2288 2317 62073553 62073524 1.000000e-03 56.5
222 TraesCS2D01G147300 chrUn 96.970 33 1 0 2288 2320 87725776 87725744 1.000000e-03 56.5
223 TraesCS2D01G147300 chrUn 96.875 32 1 0 2289 2320 118800925 118800894 4.000000e-03 54.7
224 TraesCS2D01G147300 chrUn 100.000 28 0 0 439 466 326758250 326758223 1.500000e-02 52.8
225 TraesCS2D01G147300 chrUn 88.372 43 5 0 424 466 381260160 381260202 1.500000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G147300 chr2D 88286866 88295407 8541 False 2640.000000 9433 95.497667 1 8542 6 chr2D.!!$F7 8541
1 TraesCS2D01G147300 chr2D 559299350 559301563 2213 True 1271.000000 1507 94.321500 4476 6676 2 chr2D.!!$R3 2200
2 TraesCS2D01G147300 chr2D 569252189 569252814 625 False 944.000000 944 94.099000 4472 5089 1 chr2D.!!$F5 617
3 TraesCS2D01G147300 chr2A 88661592 88664492 2900 False 1200.250000 4193 93.723750 645 3578 4 chr2A.!!$F1 2933
4 TraesCS2D01G147300 chr2A 72379341 72379926 585 True 832.000000 832 92.243000 5561 6150 1 chr2A.!!$R2 589
5 TraesCS2D01G147300 chr2A 88669524 88671637 2113 False 793.275000 1524 94.088750 1835 7587 4 chr2A.!!$F2 5752
6 TraesCS2D01G147300 chr2A 41161357 41162199 842 True 658.000000 658 81.637000 3586 4396 1 chr2A.!!$R1 810
7 TraesCS2D01G147300 chr2B 116272637 116273575 938 True 1223.000000 1223 90.135000 7587 8542 1 chr2B.!!$R1 955
8 TraesCS2D01G147300 chr2B 141559004 141564927 5923 False 1094.428571 2639 92.722857 933 7587 7 chr2B.!!$F3 6654
9 TraesCS2D01G147300 chr3D 415662842 415664964 2122 True 1311.000000 1720 94.285000 4474 6676 2 chr3D.!!$R8 2202
10 TraesCS2D01G147300 chr3D 337658985 337659641 656 True 1000.000000 1000 94.234000 6023 6675 1 chr3D.!!$R4 652
11 TraesCS2D01G147300 chr3D 135254649 135255190 541 False 789.000000 789 92.989000 4476 5016 1 chr3D.!!$F1 540
12 TraesCS2D01G147300 chr3D 497490945 497491455 510 True 462.000000 462 84.016000 3581 4062 1 chr3D.!!$R7 481
13 TraesCS2D01G147300 chr7D 296505467 296506501 1034 True 1568.000000 1568 93.989000 5635 6676 1 chr7D.!!$R2 1041
14 TraesCS2D01G147300 chr7D 558181814 558182775 961 True 1544.000000 1544 95.747000 7587 8542 1 chr7D.!!$R4 955
15 TraesCS2D01G147300 chr7D 581387205 581388970 1765 True 1328.000000 1679 94.285000 4476 6676 2 chr7D.!!$R7 2200
16 TraesCS2D01G147300 chr5D 230975349 230977333 1984 True 1257.000000 1616 94.494000 4476 6676 2 chr5D.!!$R2 2200
17 TraesCS2D01G147300 chr5D 263148239 263148899 660 False 1009.000000 1009 94.402000 6023 6676 1 chr5D.!!$F3 653
18 TraesCS2D01G147300 chr5D 530424514 530428192 3678 False 740.400000 1411 88.643600 1028 7580 5 chr5D.!!$F4 6552
19 TraesCS2D01G147300 chr4D 14993729 14994796 1067 False 1607.000000 1607 93.681000 5591 6676 1 chr4D.!!$F2 1085
20 TraesCS2D01G147300 chr4D 311909020 311909638 618 True 883.000000 883 92.593000 4476 5089 1 chr4D.!!$R5 613
21 TraesCS2D01G147300 chr4D 472669243 472669859 616 True 835.000000 835 91.346000 4476 5087 1 chr4D.!!$R8 611
22 TraesCS2D01G147300 chr1D 412178182 412179144 962 True 1594.000000 1594 96.680000 7587 8542 1 chr1D.!!$R3 955
23 TraesCS2D01G147300 chr1D 212715004 212715589 585 False 859.000000 859 93.086000 5561 6150 1 chr1D.!!$F6 589
24 TraesCS2D01G147300 chr1D 297166892 297167451 559 False 763.000000 763 91.213000 4531 5097 1 chr1D.!!$F8 566
25 TraesCS2D01G147300 chr1D 399354009 399354829 820 False 678.000000 678 82.353000 3581 4375 1 chr1D.!!$F11 794
26 TraesCS2D01G147300 chr1D 97776602 97777446 844 True 643.000000 643 81.330000 3586 4396 1 chr1D.!!$R2 810
27 TraesCS2D01G147300 chr5B 669670037 669673356 3319 False 679.666667 1552 89.243667 1028 7563 6 chr5B.!!$F3 6535
28 TraesCS2D01G147300 chr5A 229765193 229765792 599 False 845.000000 845 91.896000 4476 5089 1 chr5A.!!$F1 613
29 TraesCS2D01G147300 chr5A 658670231 658673518 3287 False 699.200000 1286 92.049200 1028 7428 5 chr5A.!!$F3 6400
30 TraesCS2D01G147300 chr4A 17977287 17977953 666 False 1005.000000 1005 94.021000 6024 6684 1 chr4A.!!$F1 660
31 TraesCS2D01G147300 chr4A 381225560 381226107 547 True 782.000000 782 92.545000 4476 5020 1 chr4A.!!$R1 544
32 TraesCS2D01G147300 chr7A 167262311 167262903 592 True 865.000000 865 93.155000 5561 6150 1 chr7A.!!$R1 589
33 TraesCS2D01G147300 chr6D 20197979 20198551 572 True 830.000000 830 92.759000 5561 6137 1 chr6D.!!$R2 576
34 TraesCS2D01G147300 chr6A 122686517 122687102 585 False 806.000000 806 91.568000 5561 6147 1 chr6A.!!$F1 586
35 TraesCS2D01G147300 chr6A 207840411 207841253 842 True 669.000000 669 81.893000 3586 4396 1 chr6A.!!$R1 810
36 TraesCS2D01G147300 chr6A 614472868 614473465 597 False 486.000000 486 82.226000 3583 4153 1 chr6A.!!$F4 570
37 TraesCS2D01G147300 chr6A 598684081 598684678 597 False 453.000000 453 81.229000 3583 4153 1 chr6A.!!$F3 570
38 TraesCS2D01G147300 chr7B 114143878 114144719 841 True 634.000000 634 81.192000 3586 4396 1 chr7B.!!$R2 810

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
371 372 0.037697 CACTCGTCCCCAATCAACGA 60.038 55.000 0.00 0.0 42.59 3.85 F
417 418 0.108585 CCGCAACTATACCTGGCCAT 59.891 55.000 5.51 0.0 0.00 4.40 F
1840 1890 0.040499 AGAAGAAGAGGGAGGAGCGT 59.960 55.000 0.00 0.0 0.00 5.07 F
3057 4284 1.272147 ACTCTTGGGTTTGGGATGCTC 60.272 52.381 0.00 0.0 0.00 4.26 F
3892 5846 1.301716 GTCGTGGAGCTTCCTGCAA 60.302 57.895 0.00 0.0 41.30 4.08 F
4771 7106 1.478510 AGCTTCGGTTCGATCATGTCT 59.521 47.619 0.00 0.0 35.23 3.41 F
4781 7116 0.460284 GATCATGTCTTCACCGCCGT 60.460 55.000 0.00 0.0 0.00 5.68 F
4918 7254 0.912487 TGTTCTTGGCCGGGTCCTAT 60.912 55.000 2.18 0.0 0.00 2.57 F
6115 8473 0.811219 TCATTCTCCATCGCAAGCCG 60.811 55.000 0.00 0.0 38.61 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1840 1890 1.305219 GGAAAGCATAGCACACGCCA 61.305 55.000 0.00 0.0 39.83 5.69 R
2170 2500 2.363306 TGAGGCAGGTTGTGAATTGT 57.637 45.000 0.00 0.0 0.00 2.71 R
3747 5694 2.426522 GAAAGCATAGCAGACACCACA 58.573 47.619 0.00 0.0 0.00 4.17 R
4714 7049 0.676184 TATGGCGCTGCTAGAAGGAG 59.324 55.000 7.64 0.0 36.68 3.69 R
4781 7116 1.117142 AACGGAAGAGACGGGTTGGA 61.117 55.000 0.00 0.0 35.23 3.53 R
6011 8364 0.178970 GCATGCCCAAGATCCCTGAT 60.179 55.000 6.36 0.0 0.00 2.90 R
6115 8473 0.951040 CCGCACAGGAAAGAGTGGAC 60.951 60.000 0.00 0.0 45.00 4.02 R
6649 11871 2.725312 CGCTGCTAGAAGGAGGGCA 61.725 63.158 0.00 0.0 39.48 5.36 R
7882 13154 0.469892 ATTTCGGATGGGGAATGGGC 60.470 55.000 0.00 0.0 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.820059 CCCCCTCTTTGCTTTGAAAC 57.180 50.000 0.00 0.00 0.00 2.78
23 24 2.038659 CCCCCTCTTTGCTTTGAAACA 58.961 47.619 0.00 0.00 0.00 2.83
24 25 2.433970 CCCCCTCTTTGCTTTGAAACAA 59.566 45.455 0.00 0.00 0.00 2.83
25 26 3.457234 CCCCTCTTTGCTTTGAAACAAC 58.543 45.455 0.00 0.00 0.00 3.32
26 27 3.115554 CCCTCTTTGCTTTGAAACAACG 58.884 45.455 0.00 0.00 0.00 4.10
27 28 3.115554 CCTCTTTGCTTTGAAACAACGG 58.884 45.455 0.00 0.00 0.00 4.44
28 29 3.181491 CCTCTTTGCTTTGAAACAACGGA 60.181 43.478 0.00 0.00 0.00 4.69
29 30 3.765026 TCTTTGCTTTGAAACAACGGAC 58.235 40.909 0.00 0.00 0.00 4.79
30 31 2.570442 TTGCTTTGAAACAACGGACC 57.430 45.000 0.00 0.00 0.00 4.46
31 32 1.464734 TGCTTTGAAACAACGGACCA 58.535 45.000 0.00 0.00 0.00 4.02
32 33 1.403679 TGCTTTGAAACAACGGACCAG 59.596 47.619 0.00 0.00 0.00 4.00
33 34 1.404035 GCTTTGAAACAACGGACCAGT 59.596 47.619 0.00 0.00 0.00 4.00
34 35 2.159296 GCTTTGAAACAACGGACCAGTT 60.159 45.455 0.00 0.00 34.15 3.16
49 50 4.742274 GTTGCAAACCCCGTTTCC 57.258 55.556 0.00 0.00 42.21 3.13
50 51 1.299544 GTTGCAAACCCCGTTTCCG 60.300 57.895 0.00 0.00 42.21 4.30
51 52 1.453379 TTGCAAACCCCGTTTCCGA 60.453 52.632 0.00 0.00 33.10 4.55
52 53 1.035932 TTGCAAACCCCGTTTCCGAA 61.036 50.000 0.00 0.00 33.10 4.30
53 54 1.035932 TGCAAACCCCGTTTCCGAAA 61.036 50.000 0.00 0.00 33.10 3.46
54 55 0.595567 GCAAACCCCGTTTCCGAAAC 60.596 55.000 13.16 13.16 33.10 2.78
55 56 0.739561 CAAACCCCGTTTCCGAAACA 59.260 50.000 21.07 0.00 41.44 2.83
56 57 1.134560 CAAACCCCGTTTCCGAAACAA 59.865 47.619 21.07 0.00 41.44 2.83
57 58 1.472188 AACCCCGTTTCCGAAACAAA 58.528 45.000 21.07 0.00 41.44 2.83
58 59 1.472188 ACCCCGTTTCCGAAACAAAA 58.528 45.000 21.07 0.00 41.44 2.44
59 60 1.134753 ACCCCGTTTCCGAAACAAAAC 59.865 47.619 21.07 0.00 41.44 2.43
64 65 2.788030 GTTTCCGAAACAAAACGCTCA 58.212 42.857 17.42 0.00 41.04 4.26
65 66 2.748461 TTCCGAAACAAAACGCTCAG 57.252 45.000 0.00 0.00 0.00 3.35
66 67 0.941542 TCCGAAACAAAACGCTCAGG 59.058 50.000 0.00 0.00 0.00 3.86
67 68 0.661020 CCGAAACAAAACGCTCAGGT 59.339 50.000 0.00 0.00 0.00 4.00
68 69 1.868498 CCGAAACAAAACGCTCAGGTA 59.132 47.619 0.00 0.00 0.00 3.08
69 70 2.349155 CCGAAACAAAACGCTCAGGTAC 60.349 50.000 0.00 0.00 0.00 3.34
70 71 2.542595 CGAAACAAAACGCTCAGGTACT 59.457 45.455 0.00 0.00 43.88 2.73
71 72 3.362693 CGAAACAAAACGCTCAGGTACTC 60.363 47.826 0.00 0.00 34.60 2.59
72 73 1.779569 ACAAAACGCTCAGGTACTCG 58.220 50.000 0.00 0.00 34.60 4.18
73 74 1.068474 CAAAACGCTCAGGTACTCGG 58.932 55.000 0.00 0.00 34.60 4.63
74 75 0.677842 AAAACGCTCAGGTACTCGGT 59.322 50.000 0.00 0.00 34.60 4.69
75 76 0.677842 AAACGCTCAGGTACTCGGTT 59.322 50.000 0.00 0.00 34.60 4.44
76 77 0.038526 AACGCTCAGGTACTCGGTTG 60.039 55.000 0.00 0.00 34.60 3.77
77 78 1.805945 CGCTCAGGTACTCGGTTGC 60.806 63.158 0.00 0.00 34.60 4.17
78 79 1.292223 GCTCAGGTACTCGGTTGCA 59.708 57.895 0.00 0.00 34.60 4.08
79 80 0.737715 GCTCAGGTACTCGGTTGCAG 60.738 60.000 0.00 0.00 34.60 4.41
80 81 0.888619 CTCAGGTACTCGGTTGCAGA 59.111 55.000 0.00 0.00 34.60 4.26
81 82 1.272490 CTCAGGTACTCGGTTGCAGAA 59.728 52.381 0.00 0.00 34.60 3.02
82 83 1.689813 TCAGGTACTCGGTTGCAGAAA 59.310 47.619 0.00 0.00 34.60 2.52
83 84 2.103432 TCAGGTACTCGGTTGCAGAAAA 59.897 45.455 0.00 0.00 34.60 2.29
84 85 2.223377 CAGGTACTCGGTTGCAGAAAAC 59.777 50.000 0.00 0.00 34.60 2.43
89 90 2.853457 CGGTTGCAGAAAACGTGTG 58.147 52.632 0.00 0.00 44.20 3.82
90 91 1.199852 CGGTTGCAGAAAACGTGTGC 61.200 55.000 0.00 0.00 44.20 4.57
94 95 2.800096 GCAGAAAACGTGTGCATGG 58.200 52.632 7.39 0.00 45.79 3.66
95 96 0.310543 GCAGAAAACGTGTGCATGGA 59.689 50.000 7.39 0.00 45.79 3.41
96 97 1.664016 GCAGAAAACGTGTGCATGGAG 60.664 52.381 7.39 0.00 45.79 3.86
97 98 0.593128 AGAAAACGTGTGCATGGAGC 59.407 50.000 0.00 0.00 45.96 4.70
114 115 4.052229 CGGGTTGCTCTCGTCCGT 62.052 66.667 0.00 0.00 36.38 4.69
115 116 2.126031 GGGTTGCTCTCGTCCGTC 60.126 66.667 0.00 0.00 0.00 4.79
116 117 2.649034 GGTTGCTCTCGTCCGTCA 59.351 61.111 0.00 0.00 0.00 4.35
117 118 1.215647 GGTTGCTCTCGTCCGTCAT 59.784 57.895 0.00 0.00 0.00 3.06
118 119 0.454600 GGTTGCTCTCGTCCGTCATA 59.545 55.000 0.00 0.00 0.00 2.15
119 120 1.067212 GGTTGCTCTCGTCCGTCATAT 59.933 52.381 0.00 0.00 0.00 1.78
120 121 2.386249 GTTGCTCTCGTCCGTCATATC 58.614 52.381 0.00 0.00 0.00 1.63
121 122 1.675552 TGCTCTCGTCCGTCATATCA 58.324 50.000 0.00 0.00 0.00 2.15
122 123 2.021457 TGCTCTCGTCCGTCATATCAA 58.979 47.619 0.00 0.00 0.00 2.57
123 124 2.223502 TGCTCTCGTCCGTCATATCAAC 60.224 50.000 0.00 0.00 0.00 3.18
124 125 2.223502 GCTCTCGTCCGTCATATCAACA 60.224 50.000 0.00 0.00 0.00 3.33
125 126 3.622828 CTCTCGTCCGTCATATCAACAG 58.377 50.000 0.00 0.00 0.00 3.16
126 127 3.275999 TCTCGTCCGTCATATCAACAGA 58.724 45.455 0.00 0.00 0.00 3.41
127 128 3.064958 TCTCGTCCGTCATATCAACAGAC 59.935 47.826 0.00 0.00 0.00 3.51
128 129 2.750712 TCGTCCGTCATATCAACAGACA 59.249 45.455 0.00 0.00 32.68 3.41
129 130 3.191791 TCGTCCGTCATATCAACAGACAA 59.808 43.478 0.00 0.00 32.68 3.18
130 131 4.112634 CGTCCGTCATATCAACAGACAAT 58.887 43.478 0.00 0.00 32.68 2.71
131 132 4.207224 CGTCCGTCATATCAACAGACAATC 59.793 45.833 0.00 0.00 32.68 2.67
132 133 4.508124 GTCCGTCATATCAACAGACAATCC 59.492 45.833 0.00 0.00 32.68 3.01
133 134 3.490896 CCGTCATATCAACAGACAATCCG 59.509 47.826 0.00 0.00 32.68 4.18
134 135 4.359706 CGTCATATCAACAGACAATCCGA 58.640 43.478 0.00 0.00 32.68 4.55
135 136 4.984785 CGTCATATCAACAGACAATCCGAT 59.015 41.667 0.00 0.00 32.68 4.18
136 137 5.107722 CGTCATATCAACAGACAATCCGATG 60.108 44.000 0.00 0.00 32.68 3.84
137 138 5.178252 GTCATATCAACAGACAATCCGATGG 59.822 44.000 0.00 0.00 32.68 3.51
138 139 3.912496 ATCAACAGACAATCCGATGGA 57.088 42.857 0.00 0.00 35.55 3.41
139 140 2.972625 TCAACAGACAATCCGATGGAC 58.027 47.619 0.00 0.00 32.98 4.02
140 141 2.301583 TCAACAGACAATCCGATGGACA 59.698 45.455 0.00 0.00 32.98 4.02
141 142 2.386661 ACAGACAATCCGATGGACAC 57.613 50.000 0.00 0.00 32.98 3.67
142 143 1.623311 ACAGACAATCCGATGGACACA 59.377 47.619 0.00 0.00 32.98 3.72
143 144 2.274437 CAGACAATCCGATGGACACAG 58.726 52.381 0.00 0.00 32.98 3.66
144 145 2.094026 CAGACAATCCGATGGACACAGA 60.094 50.000 0.00 0.00 32.98 3.41
145 146 2.167281 AGACAATCCGATGGACACAGAG 59.833 50.000 0.00 0.00 32.98 3.35
146 147 1.293924 CAATCCGATGGACACAGAGC 58.706 55.000 0.00 0.00 32.98 4.09
147 148 0.179000 AATCCGATGGACACAGAGCC 59.821 55.000 0.00 0.00 32.98 4.70
148 149 2.021068 ATCCGATGGACACAGAGCCG 62.021 60.000 0.00 0.00 32.98 5.52
149 150 2.710902 CCGATGGACACAGAGCCGA 61.711 63.158 0.00 0.00 0.00 5.54
150 151 1.517257 CGATGGACACAGAGCCGAC 60.517 63.158 0.00 0.00 0.00 4.79
151 152 1.517257 GATGGACACAGAGCCGACG 60.517 63.158 0.00 0.00 0.00 5.12
152 153 2.890847 GATGGACACAGAGCCGACGG 62.891 65.000 10.29 10.29 0.00 4.79
153 154 3.371063 GGACACAGAGCCGACGGA 61.371 66.667 20.50 0.00 0.00 4.69
154 155 2.126424 GACACAGAGCCGACGGAC 60.126 66.667 20.50 10.80 0.00 4.79
155 156 3.948086 GACACAGAGCCGACGGACG 62.948 68.421 20.50 4.32 42.18 4.79
158 159 4.838486 CAGAGCCGACGGACGCTC 62.838 72.222 20.50 16.82 41.59 5.03
167 168 4.498520 CGGACGCTCACGCAGGAT 62.499 66.667 0.00 0.00 45.53 3.24
168 169 2.583593 GGACGCTCACGCAGGATC 60.584 66.667 0.00 0.00 45.53 3.36
169 170 2.951745 GACGCTCACGCAGGATCG 60.952 66.667 0.00 0.00 45.53 3.69
170 171 3.396911 GACGCTCACGCAGGATCGA 62.397 63.158 5.07 0.00 45.53 3.59
171 172 2.026734 CGCTCACGCAGGATCGAT 59.973 61.111 0.00 0.00 35.30 3.59
172 173 2.013483 CGCTCACGCAGGATCGATC 61.013 63.158 17.36 17.36 35.30 3.69
173 174 2.013483 GCTCACGCAGGATCGATCG 61.013 63.158 18.81 9.36 35.78 3.69
174 175 1.371022 CTCACGCAGGATCGATCGG 60.371 63.158 18.81 14.24 0.00 4.18
175 176 3.032609 CACGCAGGATCGATCGGC 61.033 66.667 23.31 23.31 0.00 5.54
176 177 3.219928 ACGCAGGATCGATCGGCT 61.220 61.111 27.39 15.81 0.00 5.52
177 178 2.732468 CGCAGGATCGATCGGCTG 60.732 66.667 27.39 24.28 0.00 4.85
178 179 2.730733 GCAGGATCGATCGGCTGA 59.269 61.111 26.38 0.00 0.00 4.26
179 180 1.068083 GCAGGATCGATCGGCTGAA 59.932 57.895 26.38 0.00 0.00 3.02
180 181 0.943359 GCAGGATCGATCGGCTGAAG 60.943 60.000 26.38 11.09 0.00 3.02
181 182 0.319383 CAGGATCGATCGGCTGAAGG 60.319 60.000 20.73 0.00 0.00 3.46
182 183 1.005630 GGATCGATCGGCTGAAGGG 60.006 63.158 18.81 0.00 0.00 3.95
183 184 1.005630 GATCGATCGGCTGAAGGGG 60.006 63.158 16.41 0.00 0.00 4.79
184 185 1.457643 ATCGATCGGCTGAAGGGGA 60.458 57.895 16.41 0.00 0.00 4.81
185 186 1.467678 ATCGATCGGCTGAAGGGGAG 61.468 60.000 16.41 0.00 0.00 4.30
186 187 2.110006 GATCGGCTGAAGGGGAGC 59.890 66.667 0.00 0.00 35.57 4.70
187 188 2.366167 ATCGGCTGAAGGGGAGCT 60.366 61.111 0.00 0.00 36.63 4.09
188 189 1.977293 GATCGGCTGAAGGGGAGCTT 61.977 60.000 0.00 0.00 36.63 3.74
189 190 1.566298 ATCGGCTGAAGGGGAGCTTT 61.566 55.000 0.00 0.00 36.63 3.51
190 191 1.303643 CGGCTGAAGGGGAGCTTTT 60.304 57.895 0.00 0.00 36.63 2.27
191 192 1.308783 CGGCTGAAGGGGAGCTTTTC 61.309 60.000 0.00 0.00 36.63 2.29
192 193 0.967887 GGCTGAAGGGGAGCTTTTCC 60.968 60.000 0.00 0.00 46.00 3.13
204 205 4.929781 GGAGCTTTTCCATTGAGCTAATG 58.070 43.478 0.00 0.00 46.08 1.90
233 234 9.897744 ATTATTCAATATGCCAATTTACTGACG 57.102 29.630 0.00 0.00 0.00 4.35
234 235 6.751514 TTCAATATGCCAATTTACTGACGT 57.248 33.333 0.00 0.00 0.00 4.34
235 236 7.851387 TTCAATATGCCAATTTACTGACGTA 57.149 32.000 0.00 0.00 0.00 3.57
236 237 7.241663 TCAATATGCCAATTTACTGACGTAC 57.758 36.000 0.00 0.00 0.00 3.67
237 238 6.819146 TCAATATGCCAATTTACTGACGTACA 59.181 34.615 0.00 0.00 0.00 2.90
238 239 7.497579 TCAATATGCCAATTTACTGACGTACAT 59.502 33.333 0.00 0.00 0.00 2.29
239 240 4.937696 TGCCAATTTACTGACGTACATG 57.062 40.909 0.00 0.00 0.00 3.21
240 241 3.126171 TGCCAATTTACTGACGTACATGC 59.874 43.478 0.00 0.00 0.00 4.06
241 242 3.374058 GCCAATTTACTGACGTACATGCT 59.626 43.478 0.00 0.00 0.00 3.79
242 243 4.727734 GCCAATTTACTGACGTACATGCTG 60.728 45.833 0.00 0.00 0.00 4.41
243 244 4.201812 CCAATTTACTGACGTACATGCTGG 60.202 45.833 0.00 0.00 0.00 4.85
244 245 3.671008 TTTACTGACGTACATGCTGGT 57.329 42.857 0.00 0.00 0.00 4.00
245 246 2.647529 TACTGACGTACATGCTGGTG 57.352 50.000 0.00 0.00 0.00 4.17
246 247 0.966179 ACTGACGTACATGCTGGTGA 59.034 50.000 0.00 0.00 0.00 4.02
247 248 1.550524 ACTGACGTACATGCTGGTGAT 59.449 47.619 0.00 0.00 0.00 3.06
248 249 2.196749 CTGACGTACATGCTGGTGATC 58.803 52.381 0.00 0.00 0.00 2.92
249 250 1.824852 TGACGTACATGCTGGTGATCT 59.175 47.619 0.00 0.00 0.00 2.75
250 251 2.233676 TGACGTACATGCTGGTGATCTT 59.766 45.455 0.00 0.00 0.00 2.40
251 252 2.860735 GACGTACATGCTGGTGATCTTC 59.139 50.000 0.00 0.00 0.00 2.87
252 253 2.497675 ACGTACATGCTGGTGATCTTCT 59.502 45.455 0.00 0.00 0.00 2.85
253 254 3.055819 ACGTACATGCTGGTGATCTTCTT 60.056 43.478 0.00 0.00 0.00 2.52
254 255 3.935203 CGTACATGCTGGTGATCTTCTTT 59.065 43.478 0.00 0.00 0.00 2.52
255 256 5.109210 CGTACATGCTGGTGATCTTCTTTA 58.891 41.667 0.00 0.00 0.00 1.85
256 257 5.233050 CGTACATGCTGGTGATCTTCTTTAG 59.767 44.000 0.00 0.00 0.00 1.85
257 258 4.521146 ACATGCTGGTGATCTTCTTTAGG 58.479 43.478 0.00 0.00 0.00 2.69
258 259 3.634397 TGCTGGTGATCTTCTTTAGGG 57.366 47.619 0.00 0.00 0.00 3.53
259 260 2.912956 TGCTGGTGATCTTCTTTAGGGT 59.087 45.455 0.00 0.00 0.00 4.34
260 261 3.274288 GCTGGTGATCTTCTTTAGGGTG 58.726 50.000 0.00 0.00 0.00 4.61
261 262 3.307762 GCTGGTGATCTTCTTTAGGGTGT 60.308 47.826 0.00 0.00 0.00 4.16
262 263 4.256920 CTGGTGATCTTCTTTAGGGTGTG 58.743 47.826 0.00 0.00 0.00 3.82
263 264 3.650942 TGGTGATCTTCTTTAGGGTGTGT 59.349 43.478 0.00 0.00 0.00 3.72
264 265 4.104102 TGGTGATCTTCTTTAGGGTGTGTT 59.896 41.667 0.00 0.00 0.00 3.32
265 266 5.070685 GGTGATCTTCTTTAGGGTGTGTTT 58.929 41.667 0.00 0.00 0.00 2.83
266 267 5.048713 GGTGATCTTCTTTAGGGTGTGTTTG 60.049 44.000 0.00 0.00 0.00 2.93
267 268 5.048713 GTGATCTTCTTTAGGGTGTGTTTGG 60.049 44.000 0.00 0.00 0.00 3.28
268 269 4.513406 TCTTCTTTAGGGTGTGTTTGGT 57.487 40.909 0.00 0.00 0.00 3.67
269 270 4.862371 TCTTCTTTAGGGTGTGTTTGGTT 58.138 39.130 0.00 0.00 0.00 3.67
270 271 4.642885 TCTTCTTTAGGGTGTGTTTGGTTG 59.357 41.667 0.00 0.00 0.00 3.77
271 272 2.691011 TCTTTAGGGTGTGTTTGGTTGC 59.309 45.455 0.00 0.00 0.00 4.17
272 273 2.145397 TTAGGGTGTGTTTGGTTGCA 57.855 45.000 0.00 0.00 0.00 4.08
273 274 1.686355 TAGGGTGTGTTTGGTTGCAG 58.314 50.000 0.00 0.00 0.00 4.41
274 275 0.324275 AGGGTGTGTTTGGTTGCAGT 60.324 50.000 0.00 0.00 0.00 4.40
275 276 0.102300 GGGTGTGTTTGGTTGCAGTC 59.898 55.000 0.00 0.00 0.00 3.51
276 277 0.814457 GGTGTGTTTGGTTGCAGTCA 59.186 50.000 0.00 0.00 0.00 3.41
277 278 1.469079 GGTGTGTTTGGTTGCAGTCAC 60.469 52.381 0.00 0.00 0.00 3.67
278 279 1.201181 GTGTGTTTGGTTGCAGTCACA 59.799 47.619 0.00 0.00 34.23 3.58
279 280 1.472082 TGTGTTTGGTTGCAGTCACAG 59.528 47.619 0.00 0.00 33.07 3.66
280 281 1.102154 TGTTTGGTTGCAGTCACAGG 58.898 50.000 0.00 0.00 0.00 4.00
281 282 0.249031 GTTTGGTTGCAGTCACAGGC 60.249 55.000 0.00 0.00 0.00 4.85
282 283 1.391157 TTTGGTTGCAGTCACAGGCC 61.391 55.000 0.00 0.00 0.00 5.19
283 284 3.357079 GGTTGCAGTCACAGGCCG 61.357 66.667 0.00 0.00 0.00 6.13
284 285 3.357079 GTTGCAGTCACAGGCCGG 61.357 66.667 0.00 0.00 0.00 6.13
285 286 3.555324 TTGCAGTCACAGGCCGGA 61.555 61.111 10.86 0.00 0.00 5.14
286 287 3.113514 TTGCAGTCACAGGCCGGAA 62.114 57.895 10.86 0.00 0.00 4.30
287 288 2.045926 GCAGTCACAGGCCGGAAT 60.046 61.111 10.86 0.00 0.00 3.01
288 289 2.401766 GCAGTCACAGGCCGGAATG 61.402 63.158 10.86 13.62 32.66 2.67
289 290 1.003355 CAGTCACAGGCCGGAATGT 60.003 57.895 10.86 5.76 0.00 2.71
290 291 1.021390 CAGTCACAGGCCGGAATGTC 61.021 60.000 10.86 0.00 0.00 3.06
291 292 1.003839 GTCACAGGCCGGAATGTCA 60.004 57.895 10.86 0.00 0.00 3.58
292 293 1.003839 TCACAGGCCGGAATGTCAC 60.004 57.895 10.86 0.00 0.00 3.67
293 294 2.047274 ACAGGCCGGAATGTCACG 60.047 61.111 10.86 0.00 0.00 4.35
298 299 2.660206 CCGGAATGTCACGGGTCA 59.340 61.111 0.00 0.00 46.08 4.02
299 300 1.447838 CCGGAATGTCACGGGTCAG 60.448 63.158 0.00 0.00 46.08 3.51
300 301 1.589630 CGGAATGTCACGGGTCAGA 59.410 57.895 0.00 0.00 0.00 3.27
301 302 0.736325 CGGAATGTCACGGGTCAGAC 60.736 60.000 0.00 0.00 35.37 3.51
302 303 0.391263 GGAATGTCACGGGTCAGACC 60.391 60.000 11.70 11.70 37.60 3.85
313 314 0.107165 GGTCAGACCCATTACCAGGC 60.107 60.000 8.65 0.00 30.04 4.85
314 315 0.107165 GTCAGACCCATTACCAGGCC 60.107 60.000 0.00 0.00 0.00 5.19
315 316 0.253160 TCAGACCCATTACCAGGCCT 60.253 55.000 0.00 0.00 0.00 5.19
316 317 0.181350 CAGACCCATTACCAGGCCTC 59.819 60.000 0.00 0.00 0.00 4.70
317 318 0.253160 AGACCCATTACCAGGCCTCA 60.253 55.000 0.00 0.00 0.00 3.86
318 319 0.846693 GACCCATTACCAGGCCTCAT 59.153 55.000 0.00 0.00 0.00 2.90
319 320 1.215423 GACCCATTACCAGGCCTCATT 59.785 52.381 0.00 0.00 0.00 2.57
320 321 1.215423 ACCCATTACCAGGCCTCATTC 59.785 52.381 0.00 0.00 0.00 2.67
321 322 1.479389 CCCATTACCAGGCCTCATTCC 60.479 57.143 0.00 0.00 0.00 3.01
322 323 1.215173 CCATTACCAGGCCTCATTCCA 59.785 52.381 0.00 0.00 0.00 3.53
323 324 2.579873 CATTACCAGGCCTCATTCCAG 58.420 52.381 0.00 0.00 0.00 3.86
324 325 0.255890 TTACCAGGCCTCATTCCAGC 59.744 55.000 0.00 0.00 0.00 4.85
325 326 0.913934 TACCAGGCCTCATTCCAGCA 60.914 55.000 0.00 0.00 0.00 4.41
326 327 1.229359 CCAGGCCTCATTCCAGCAT 59.771 57.895 0.00 0.00 0.00 3.79
327 328 0.396695 CCAGGCCTCATTCCAGCATT 60.397 55.000 0.00 0.00 0.00 3.56
328 329 1.481871 CAGGCCTCATTCCAGCATTT 58.518 50.000 0.00 0.00 0.00 2.32
329 330 1.136305 CAGGCCTCATTCCAGCATTTG 59.864 52.381 0.00 0.00 0.00 2.32
339 340 2.927553 CCAGCATTTGGTAGAGCAAC 57.072 50.000 0.00 0.00 42.41 4.17
340 341 1.474077 CCAGCATTTGGTAGAGCAACC 59.526 52.381 0.00 0.00 42.41 3.77
341 342 1.131126 CAGCATTTGGTAGAGCAACCG 59.869 52.381 0.00 0.00 42.91 4.44
342 343 0.451783 GCATTTGGTAGAGCAACCGG 59.548 55.000 0.00 0.00 42.91 5.28
343 344 1.948611 GCATTTGGTAGAGCAACCGGA 60.949 52.381 9.46 0.00 42.91 5.14
344 345 2.432444 CATTTGGTAGAGCAACCGGAA 58.568 47.619 9.46 0.00 42.91 4.30
345 346 1.886886 TTTGGTAGAGCAACCGGAAC 58.113 50.000 9.46 0.00 42.91 3.62
346 347 0.759959 TTGGTAGAGCAACCGGAACA 59.240 50.000 9.46 0.00 42.91 3.18
347 348 0.320374 TGGTAGAGCAACCGGAACAG 59.680 55.000 9.46 0.00 42.91 3.16
348 349 0.606604 GGTAGAGCAACCGGAACAGA 59.393 55.000 9.46 0.00 0.00 3.41
349 350 1.001633 GGTAGAGCAACCGGAACAGAA 59.998 52.381 9.46 0.00 0.00 3.02
350 351 2.067013 GTAGAGCAACCGGAACAGAAC 58.933 52.381 9.46 0.00 0.00 3.01
351 352 0.250338 AGAGCAACCGGAACAGAACC 60.250 55.000 9.46 0.00 0.00 3.62
352 353 1.228154 AGCAACCGGAACAGAACCC 60.228 57.895 9.46 0.00 0.00 4.11
353 354 1.527380 GCAACCGGAACAGAACCCA 60.527 57.895 9.46 0.00 0.00 4.51
354 355 1.792118 GCAACCGGAACAGAACCCAC 61.792 60.000 9.46 0.00 0.00 4.61
355 356 0.179029 CAACCGGAACAGAACCCACT 60.179 55.000 9.46 0.00 0.00 4.00
356 357 0.108019 AACCGGAACAGAACCCACTC 59.892 55.000 9.46 0.00 0.00 3.51
357 358 1.374252 CCGGAACAGAACCCACTCG 60.374 63.158 0.00 0.00 0.00 4.18
358 359 1.366366 CGGAACAGAACCCACTCGT 59.634 57.895 0.00 0.00 0.00 4.18
359 360 0.666577 CGGAACAGAACCCACTCGTC 60.667 60.000 0.00 0.00 0.00 4.20
360 361 0.320508 GGAACAGAACCCACTCGTCC 60.321 60.000 0.00 0.00 0.00 4.79
361 362 0.320508 GAACAGAACCCACTCGTCCC 60.321 60.000 0.00 0.00 0.00 4.46
362 363 1.765597 AACAGAACCCACTCGTCCCC 61.766 60.000 0.00 0.00 0.00 4.81
363 364 2.203182 AGAACCCACTCGTCCCCA 59.797 61.111 0.00 0.00 0.00 4.96
364 365 1.460689 AGAACCCACTCGTCCCCAA 60.461 57.895 0.00 0.00 0.00 4.12
365 366 0.840722 AGAACCCACTCGTCCCCAAT 60.841 55.000 0.00 0.00 0.00 3.16
366 367 0.392595 GAACCCACTCGTCCCCAATC 60.393 60.000 0.00 0.00 0.00 2.67
367 368 1.131303 AACCCACTCGTCCCCAATCA 61.131 55.000 0.00 0.00 0.00 2.57
368 369 1.131303 ACCCACTCGTCCCCAATCAA 61.131 55.000 0.00 0.00 0.00 2.57
369 370 0.676782 CCCACTCGTCCCCAATCAAC 60.677 60.000 0.00 0.00 0.00 3.18
370 371 1.019278 CCACTCGTCCCCAATCAACG 61.019 60.000 0.00 0.00 37.74 4.10
371 372 0.037697 CACTCGTCCCCAATCAACGA 60.038 55.000 0.00 0.00 42.59 3.85
372 373 0.682852 ACTCGTCCCCAATCAACGAA 59.317 50.000 0.00 0.00 43.96 3.85
373 374 1.278127 ACTCGTCCCCAATCAACGAAT 59.722 47.619 0.00 0.00 43.96 3.34
374 375 2.498481 ACTCGTCCCCAATCAACGAATA 59.502 45.455 0.00 0.00 43.96 1.75
375 376 3.134081 ACTCGTCCCCAATCAACGAATAT 59.866 43.478 0.00 0.00 43.96 1.28
376 377 4.127171 CTCGTCCCCAATCAACGAATATT 58.873 43.478 0.00 0.00 43.96 1.28
377 378 4.124238 TCGTCCCCAATCAACGAATATTC 58.876 43.478 5.30 5.30 41.94 1.75
396 397 2.964343 GGAACGAGTCCTCTCCACT 58.036 57.895 0.00 0.00 43.98 4.00
397 398 0.812549 GGAACGAGTCCTCTCCACTC 59.187 60.000 0.00 0.00 43.98 3.51
398 399 0.812549 GAACGAGTCCTCTCCACTCC 59.187 60.000 0.00 0.00 37.58 3.85
399 400 0.612453 AACGAGTCCTCTCCACTCCC 60.612 60.000 0.00 0.00 37.58 4.30
400 401 2.115911 CGAGTCCTCTCCACTCCCG 61.116 68.421 0.00 0.00 37.58 5.14
401 402 2.363147 AGTCCTCTCCACTCCCGC 60.363 66.667 0.00 0.00 0.00 6.13
402 403 2.680352 GTCCTCTCCACTCCCGCA 60.680 66.667 0.00 0.00 0.00 5.69
403 404 2.119611 TCCTCTCCACTCCCGCAA 59.880 61.111 0.00 0.00 0.00 4.85
404 405 2.266055 CCTCTCCACTCCCGCAAC 59.734 66.667 0.00 0.00 0.00 4.17
405 406 2.286523 CCTCTCCACTCCCGCAACT 61.287 63.158 0.00 0.00 0.00 3.16
406 407 0.970937 CCTCTCCACTCCCGCAACTA 60.971 60.000 0.00 0.00 0.00 2.24
407 408 1.115467 CTCTCCACTCCCGCAACTAT 58.885 55.000 0.00 0.00 0.00 2.12
408 409 2.307768 CTCTCCACTCCCGCAACTATA 58.692 52.381 0.00 0.00 0.00 1.31
409 410 2.029623 TCTCCACTCCCGCAACTATAC 58.970 52.381 0.00 0.00 0.00 1.47
410 411 1.068741 CTCCACTCCCGCAACTATACC 59.931 57.143 0.00 0.00 0.00 2.73
411 412 1.120530 CCACTCCCGCAACTATACCT 58.879 55.000 0.00 0.00 0.00 3.08
412 413 1.202533 CCACTCCCGCAACTATACCTG 60.203 57.143 0.00 0.00 0.00 4.00
413 414 1.120530 ACTCCCGCAACTATACCTGG 58.879 55.000 0.00 0.00 0.00 4.45
414 415 0.249911 CTCCCGCAACTATACCTGGC 60.250 60.000 0.00 0.00 0.00 4.85
415 416 1.227853 CCCGCAACTATACCTGGCC 60.228 63.158 0.00 0.00 0.00 5.36
416 417 1.524961 CCGCAACTATACCTGGCCA 59.475 57.895 4.71 4.71 0.00 5.36
417 418 0.108585 CCGCAACTATACCTGGCCAT 59.891 55.000 5.51 0.00 0.00 4.40
418 419 1.346395 CCGCAACTATACCTGGCCATA 59.654 52.381 5.51 0.00 0.00 2.74
419 420 2.413837 CGCAACTATACCTGGCCATAC 58.586 52.381 5.51 0.00 0.00 2.39
420 421 2.779506 GCAACTATACCTGGCCATACC 58.220 52.381 5.51 0.00 39.84 2.73
421 422 2.372172 GCAACTATACCTGGCCATACCT 59.628 50.000 5.51 0.00 40.22 3.08
422 423 3.557264 GCAACTATACCTGGCCATACCTC 60.557 52.174 5.51 0.00 40.22 3.85
423 424 2.526432 ACTATACCTGGCCATACCTCG 58.474 52.381 5.51 0.00 40.22 4.63
424 425 1.825474 CTATACCTGGCCATACCTCGG 59.175 57.143 5.51 5.16 40.22 4.63
425 426 0.836400 ATACCTGGCCATACCTCGGG 60.836 60.000 5.51 4.26 40.22 5.14
449 450 4.451150 CTAGCCAAGCCCGACGCA 62.451 66.667 0.00 0.00 41.38 5.24
450 451 3.950794 CTAGCCAAGCCCGACGCAA 62.951 63.158 0.00 0.00 41.38 4.85
451 452 3.538785 TAGCCAAGCCCGACGCAAA 62.539 57.895 0.00 0.00 41.38 3.68
452 453 3.972276 GCCAAGCCCGACGCAAAA 61.972 61.111 0.00 0.00 41.38 2.44
453 454 2.725008 CCAAGCCCGACGCAAAAA 59.275 55.556 0.00 0.00 41.38 1.94
488 489 4.716003 GCTGTCGGGCCTAGTTTT 57.284 55.556 0.84 0.00 0.00 2.43
489 490 2.942641 GCTGTCGGGCCTAGTTTTT 58.057 52.632 0.84 0.00 0.00 1.94
490 491 2.103537 GCTGTCGGGCCTAGTTTTTA 57.896 50.000 0.84 0.00 0.00 1.52
491 492 1.736126 GCTGTCGGGCCTAGTTTTTAC 59.264 52.381 0.84 0.00 0.00 2.01
492 493 1.997606 CTGTCGGGCCTAGTTTTTACG 59.002 52.381 0.84 0.00 0.00 3.18
493 494 0.723414 GTCGGGCCTAGTTTTTACGC 59.277 55.000 0.84 0.00 0.00 4.42
494 495 0.391528 TCGGGCCTAGTTTTTACGCC 60.392 55.000 0.84 0.00 38.96 5.68
496 497 3.252979 GGCCTAGTTTTTACGCCCA 57.747 52.632 0.00 0.00 33.30 5.36
497 498 1.536940 GGCCTAGTTTTTACGCCCAA 58.463 50.000 0.00 0.00 33.30 4.12
498 499 1.471287 GGCCTAGTTTTTACGCCCAAG 59.529 52.381 0.00 0.00 33.30 3.61
499 500 1.135489 GCCTAGTTTTTACGCCCAAGC 60.135 52.381 0.00 0.00 0.00 4.01
500 501 1.471287 CCTAGTTTTTACGCCCAAGCC 59.529 52.381 0.00 0.00 34.57 4.35
501 502 1.471287 CTAGTTTTTACGCCCAAGCCC 59.529 52.381 0.00 0.00 34.57 5.19
502 503 1.081041 GTTTTTACGCCCAAGCCCG 60.081 57.895 0.00 0.00 34.57 6.13
503 504 2.269529 TTTTTACGCCCAAGCCCGG 61.270 57.895 0.00 0.00 34.57 5.73
512 513 3.989787 CAAGCCCGGCCCAAACAC 61.990 66.667 5.55 0.00 0.00 3.32
513 514 4.531426 AAGCCCGGCCCAAACACA 62.531 61.111 5.55 0.00 0.00 3.72
514 515 3.826265 AAGCCCGGCCCAAACACAT 62.826 57.895 5.55 0.00 0.00 3.21
515 516 2.361865 GCCCGGCCCAAACACATA 60.362 61.111 0.00 0.00 0.00 2.29
516 517 1.979693 GCCCGGCCCAAACACATAA 60.980 57.895 0.00 0.00 0.00 1.90
517 518 1.536943 GCCCGGCCCAAACACATAAA 61.537 55.000 0.00 0.00 0.00 1.40
518 519 0.969894 CCCGGCCCAAACACATAAAA 59.030 50.000 0.00 0.00 0.00 1.52
519 520 1.067213 CCCGGCCCAAACACATAAAAG 60.067 52.381 0.00 0.00 0.00 2.27
520 521 1.671556 CCGGCCCAAACACATAAAAGC 60.672 52.381 0.00 0.00 0.00 3.51
521 522 1.671556 CGGCCCAAACACATAAAAGCC 60.672 52.381 0.00 0.00 35.78 4.35
522 523 1.623311 GGCCCAAACACATAAAAGCCT 59.377 47.619 0.00 0.00 36.22 4.58
523 524 2.612721 GGCCCAAACACATAAAAGCCTG 60.613 50.000 0.00 0.00 36.22 4.85
524 525 2.687370 CCCAAACACATAAAAGCCTGC 58.313 47.619 0.00 0.00 0.00 4.85
525 526 2.612721 CCCAAACACATAAAAGCCTGCC 60.613 50.000 0.00 0.00 0.00 4.85
526 527 2.327568 CAAACACATAAAAGCCTGCCG 58.672 47.619 0.00 0.00 0.00 5.69
527 528 0.887933 AACACATAAAAGCCTGCCGG 59.112 50.000 0.00 0.00 0.00 6.13
528 529 0.965363 ACACATAAAAGCCTGCCGGG 60.965 55.000 2.18 0.00 38.36 5.73
537 538 4.506255 CCTGCCGGGCCCCTTTAG 62.506 72.222 18.66 9.62 0.00 1.85
538 539 4.506255 CTGCCGGGCCCCTTTAGG 62.506 72.222 18.66 12.82 0.00 2.69
540 541 3.735097 GCCGGGCCCCTTTAGGAA 61.735 66.667 18.66 0.00 38.24 3.36
541 542 3.092624 CCGGGCCCCTTTAGGAAA 58.907 61.111 18.66 0.00 38.24 3.13
542 543 1.618586 CCGGGCCCCTTTAGGAAAT 59.381 57.895 18.66 0.00 38.24 2.17
543 544 0.467474 CCGGGCCCCTTTAGGAAATC 60.467 60.000 18.66 0.00 38.24 2.17
544 545 0.818040 CGGGCCCCTTTAGGAAATCG 60.818 60.000 18.66 0.00 38.24 3.34
545 546 1.107538 GGGCCCCTTTAGGAAATCGC 61.108 60.000 12.23 0.00 38.24 4.58
546 547 0.395173 GGCCCCTTTAGGAAATCGCA 60.395 55.000 0.00 0.00 38.24 5.10
547 548 1.470051 GCCCCTTTAGGAAATCGCAA 58.530 50.000 0.00 0.00 38.24 4.85
548 549 1.822371 GCCCCTTTAGGAAATCGCAAA 59.178 47.619 0.00 0.00 38.24 3.68
549 550 2.232696 GCCCCTTTAGGAAATCGCAAAA 59.767 45.455 0.00 0.00 38.24 2.44
550 551 3.306433 GCCCCTTTAGGAAATCGCAAAAA 60.306 43.478 0.00 0.00 38.24 1.94
551 552 4.242475 CCCCTTTAGGAAATCGCAAAAAC 58.758 43.478 0.00 0.00 38.24 2.43
552 553 3.917985 CCCTTTAGGAAATCGCAAAAACG 59.082 43.478 0.00 0.00 38.24 3.60
553 554 4.320641 CCCTTTAGGAAATCGCAAAAACGA 60.321 41.667 0.00 0.00 42.33 3.85
554 555 4.615541 CCTTTAGGAAATCGCAAAAACGAC 59.384 41.667 0.00 0.00 40.67 4.34
555 556 2.309898 AGGAAATCGCAAAAACGACG 57.690 45.000 0.00 0.00 46.28 5.12
556 557 1.069500 AGGAAATCGCAAAAACGACGG 60.069 47.619 0.00 0.00 46.28 4.79
557 558 1.323791 GAAATCGCAAAAACGACGGG 58.676 50.000 0.00 0.00 46.28 5.28
558 559 0.662077 AAATCGCAAAAACGACGGGC 60.662 50.000 0.00 0.00 46.28 6.13
559 560 2.466520 AATCGCAAAAACGACGGGCC 62.467 55.000 0.00 0.00 46.28 5.80
560 561 4.693525 CGCAAAAACGACGGGCCC 62.694 66.667 13.57 13.57 34.06 5.80
561 562 3.597728 GCAAAAACGACGGGCCCA 61.598 61.111 24.92 0.00 0.00 5.36
562 563 2.642700 CAAAAACGACGGGCCCAG 59.357 61.111 24.92 17.36 0.00 4.45
563 564 2.596338 AAAAACGACGGGCCCAGG 60.596 61.111 24.92 12.67 0.00 4.45
594 595 2.565841 CCTTCGGGCTCAAAATCTAGG 58.434 52.381 0.00 0.00 0.00 3.02
595 596 1.943340 CTTCGGGCTCAAAATCTAGGC 59.057 52.381 0.00 0.00 37.55 3.93
598 599 2.707902 GGCTCAAAATCTAGGCCCG 58.292 57.895 0.00 0.00 37.12 6.13
599 600 0.819666 GGCTCAAAATCTAGGCCCGG 60.820 60.000 0.00 0.00 37.12 5.73
600 601 0.819666 GCTCAAAATCTAGGCCCGGG 60.820 60.000 19.09 19.09 0.00 5.73
601 602 0.819666 CTCAAAATCTAGGCCCGGGC 60.820 60.000 38.57 38.57 41.06 6.13
619 620 4.124943 CTGGCCCAGGAGCAGCAT 62.125 66.667 1.63 0.00 0.00 3.79
620 621 4.119363 TGGCCCAGGAGCAGCATC 62.119 66.667 0.00 0.00 0.00 3.91
623 624 4.559063 CCCAGGAGCAGCATCGGG 62.559 72.222 0.00 0.00 0.00 5.14
648 649 2.032987 GGGTCGGGCTTTTTCGGA 59.967 61.111 0.00 0.00 0.00 4.55
679 680 3.712907 GGCCAGGACTACCCGCAA 61.713 66.667 0.00 0.00 40.87 4.85
700 701 1.531739 CCTATCGCTGCTCCTCTCCC 61.532 65.000 0.00 0.00 0.00 4.30
778 779 3.459965 CTCCCTCTCTGCTGCGCT 61.460 66.667 9.73 0.00 0.00 5.92
829 830 3.151022 CTGCGGGTCCTCTCCCTC 61.151 72.222 0.25 0.00 44.95 4.30
832 833 4.824515 CGGGTCCTCTCCCTCGCT 62.825 72.222 0.25 0.00 44.95 4.93
833 834 2.835895 GGGTCCTCTCCCTCGCTC 60.836 72.222 0.00 0.00 43.85 5.03
834 835 2.835895 GGTCCTCTCCCTCGCTCC 60.836 72.222 0.00 0.00 0.00 4.70
835 836 2.043852 GTCCTCTCCCTCGCTCCA 60.044 66.667 0.00 0.00 0.00 3.86
836 837 1.456705 GTCCTCTCCCTCGCTCCAT 60.457 63.158 0.00 0.00 0.00 3.41
837 838 1.152652 TCCTCTCCCTCGCTCCATC 60.153 63.158 0.00 0.00 0.00 3.51
838 839 1.152567 CCTCTCCCTCGCTCCATCT 60.153 63.158 0.00 0.00 0.00 2.90
839 840 1.178534 CCTCTCCCTCGCTCCATCTC 61.179 65.000 0.00 0.00 0.00 2.75
840 841 1.152652 TCTCCCTCGCTCCATCTCC 60.153 63.158 0.00 0.00 0.00 3.71
841 842 2.123251 TCCCTCGCTCCATCTCCC 60.123 66.667 0.00 0.00 0.00 4.30
842 843 2.123077 CCCTCGCTCCATCTCCCT 60.123 66.667 0.00 0.00 0.00 4.20
843 844 2.206536 CCCTCGCTCCATCTCCCTC 61.207 68.421 0.00 0.00 0.00 4.30
844 845 2.560119 CCTCGCTCCATCTCCCTCG 61.560 68.421 0.00 0.00 0.00 4.63
845 846 3.206211 CTCGCTCCATCTCCCTCGC 62.206 68.421 0.00 0.00 0.00 5.03
846 847 4.292178 CGCTCCATCTCCCTCGCC 62.292 72.222 0.00 0.00 0.00 5.54
847 848 3.934962 GCTCCATCTCCCTCGCCC 61.935 72.222 0.00 0.00 0.00 6.13
848 849 3.237741 CTCCATCTCCCTCGCCCC 61.238 72.222 0.00 0.00 0.00 5.80
849 850 4.088351 TCCATCTCCCTCGCCCCA 62.088 66.667 0.00 0.00 0.00 4.96
850 851 2.851102 CCATCTCCCTCGCCCCAT 60.851 66.667 0.00 0.00 0.00 4.00
851 852 2.746359 CATCTCCCTCGCCCCATC 59.254 66.667 0.00 0.00 0.00 3.51
852 853 1.840650 CATCTCCCTCGCCCCATCT 60.841 63.158 0.00 0.00 0.00 2.90
853 854 1.535202 ATCTCCCTCGCCCCATCTC 60.535 63.158 0.00 0.00 0.00 2.75
854 855 3.237741 CTCCCTCGCCCCATCTCC 61.238 72.222 0.00 0.00 0.00 3.71
855 856 3.765257 CTCCCTCGCCCCATCTCCT 62.765 68.421 0.00 0.00 0.00 3.69
856 857 3.554342 CCCTCGCCCCATCTCCTG 61.554 72.222 0.00 0.00 0.00 3.86
857 858 4.247380 CCTCGCCCCATCTCCTGC 62.247 72.222 0.00 0.00 0.00 4.85
858 859 3.473647 CTCGCCCCATCTCCTGCA 61.474 66.667 0.00 0.00 0.00 4.41
859 860 3.746949 CTCGCCCCATCTCCTGCAC 62.747 68.421 0.00 0.00 0.00 4.57
860 861 4.100084 CGCCCCATCTCCTGCACA 62.100 66.667 0.00 0.00 0.00 4.57
861 862 2.124403 GCCCCATCTCCTGCACAG 60.124 66.667 0.00 0.00 0.00 3.66
862 863 2.124403 CCCCATCTCCTGCACAGC 60.124 66.667 0.00 0.00 0.00 4.40
863 864 2.677289 CCCCATCTCCTGCACAGCT 61.677 63.158 0.00 0.00 0.00 4.24
864 865 1.451567 CCCATCTCCTGCACAGCTG 60.452 63.158 13.48 13.48 0.00 4.24
865 866 1.298993 CCATCTCCTGCACAGCTGT 59.701 57.895 15.25 15.25 0.00 4.40
866 867 0.743701 CCATCTCCTGCACAGCTGTC 60.744 60.000 18.64 12.59 0.00 3.51
1115 1132 0.725133 TCCCCATCTTCTTCCCCTCT 59.275 55.000 0.00 0.00 0.00 3.69
1840 1890 0.040499 AGAAGAAGAGGGAGGAGCGT 59.960 55.000 0.00 0.00 0.00 5.07
2170 2500 7.771361 TGATTATTCGTTAGGAATGCCTACAAA 59.229 33.333 0.00 0.00 46.35 2.83
2441 2774 6.821616 ATGTAGTCCTTGATGATTCCTTCT 57.178 37.500 0.00 0.00 0.00 2.85
2516 2849 8.646900 ACATAATACACAAAACCACTTTCCAAT 58.353 29.630 0.00 0.00 0.00 3.16
2593 3808 8.929827 TGTGCAAAGATTGAATTTATACATGG 57.070 30.769 0.00 0.00 0.00 3.66
2693 3908 9.125026 GATATTTAGGGATGTCATGTGAAGTTT 57.875 33.333 0.00 0.00 0.00 2.66
2702 3917 3.561310 GTCATGTGAAGTTTGAGCAGACA 59.439 43.478 0.00 0.00 0.00 3.41
2727 3942 7.724305 AATAACAAGTCACAATCGTACAACT 57.276 32.000 0.00 0.00 0.00 3.16
2898 4114 6.042552 ACAAACTTGGAATGAAGAGAGAGAGA 59.957 38.462 0.00 0.00 0.00 3.10
2899 4115 5.920193 ACTTGGAATGAAGAGAGAGAGAG 57.080 43.478 0.00 0.00 0.00 3.20
3057 4284 1.272147 ACTCTTGGGTTTGGGATGCTC 60.272 52.381 0.00 0.00 0.00 4.26
3133 4360 2.368548 GGGACAATTTTGCCCTGTTCTT 59.631 45.455 12.68 0.00 39.72 2.52
3164 4391 4.970003 CACAGCTTCTTTTGGAGTTTAACG 59.030 41.667 0.00 0.00 0.00 3.18
3531 4772 9.190317 CTCCTAACTTCCTAAGGCAAAAATAAT 57.810 33.333 0.00 0.00 0.00 1.28
3547 4788 7.856894 GCAAAAATAATTCAACATGCAACAGTT 59.143 29.630 0.00 0.00 33.00 3.16
3557 4798 4.397420 ACATGCAACAGTTATCAAGGACA 58.603 39.130 0.00 0.00 0.00 4.02
3574 4815 4.406456 AGGACATGCAGGAACAAATGTAA 58.594 39.130 4.84 0.00 33.51 2.41
3578 4819 4.584325 ACATGCAGGAACAAATGTAACAGT 59.416 37.500 4.84 0.00 31.63 3.55
3579 4820 4.829064 TGCAGGAACAAATGTAACAGTC 57.171 40.909 0.00 0.00 0.00 3.51
3747 5694 3.600617 TCCACAAAATAAGGGGGAATCCT 59.399 43.478 0.00 0.00 39.17 3.24
3892 5846 1.301716 GTCGTGGAGCTTCCTGCAA 60.302 57.895 0.00 0.00 41.30 4.08
4511 6845 3.334604 CCTAATGGCCTGGGCTGA 58.665 61.111 21.72 1.80 41.60 4.26
4534 6868 3.190118 CGGTATAGCCCGTTAGTCTTAGG 59.810 52.174 0.00 0.00 43.07 2.69
4639 6973 9.859427 GAGAGGAGATGTATCAATCTAATCAAG 57.141 37.037 0.00 0.00 37.03 3.02
4771 7106 1.478510 AGCTTCGGTTCGATCATGTCT 59.521 47.619 0.00 0.00 35.23 3.41
4781 7116 0.460284 GATCATGTCTTCACCGCCGT 60.460 55.000 0.00 0.00 0.00 5.68
4799 7134 1.532316 TCCAACCCGTCTCTTCCGT 60.532 57.895 0.00 0.00 0.00 4.69
4918 7254 0.912487 TGTTCTTGGCCGGGTCCTAT 60.912 55.000 2.18 0.00 0.00 2.57
4921 7257 2.041430 TTGGCCGGGTCCTATGGA 59.959 61.111 2.18 0.00 0.00 3.41
5797 8142 1.618447 ATTACCGCTTCCCCAGGGT 60.618 57.895 4.22 0.00 36.47 4.34
5825 8170 1.372087 CCAGCAGATCAAGTTCCCGC 61.372 60.000 0.00 0.00 0.00 6.13
5826 8171 1.078143 AGCAGATCAAGTTCCCGCC 60.078 57.895 0.00 0.00 0.00 6.13
5827 8172 2.464459 GCAGATCAAGTTCCCGCCG 61.464 63.158 0.00 0.00 0.00 6.46
5828 8173 1.079127 CAGATCAAGTTCCCGCCGT 60.079 57.895 0.00 0.00 0.00 5.68
5829 8174 1.084370 CAGATCAAGTTCCCGCCGTC 61.084 60.000 0.00 0.00 0.00 4.79
5830 8175 2.125673 ATCAAGTTCCCGCCGTCG 60.126 61.111 0.00 0.00 0.00 5.12
5951 8304 2.982130 GGGAGATGCGTGGTCTGT 59.018 61.111 0.00 0.00 0.00 3.41
6005 8358 2.354203 GCAAAGGACCTCGATCTTGTCT 60.354 50.000 0.00 0.00 0.00 3.41
6007 8360 2.223803 AGGACCTCGATCTTGTCTGT 57.776 50.000 0.00 0.00 0.00 3.41
6011 8364 1.344438 ACCTCGATCTTGTCTGTTGCA 59.656 47.619 0.00 0.00 0.00 4.08
6014 8367 3.256558 CTCGATCTTGTCTGTTGCATCA 58.743 45.455 0.00 0.00 0.00 3.07
6072 8425 1.402852 CCTCAAAGTCTGCGACATCGA 60.403 52.381 5.26 0.00 43.02 3.59
6115 8473 0.811219 TCATTCTCCATCGCAAGCCG 60.811 55.000 0.00 0.00 38.61 5.52
6125 8483 1.961277 CGCAAGCCGTCCACTCTTT 60.961 57.895 0.00 0.00 0.00 2.52
6678 11900 3.744238 TCTAGCAGCGCCATAACAATA 57.256 42.857 2.29 0.00 0.00 1.90
6679 11901 3.390135 TCTAGCAGCGCCATAACAATAC 58.610 45.455 2.29 0.00 0.00 1.89
6680 11902 2.332063 AGCAGCGCCATAACAATACT 57.668 45.000 2.29 0.00 0.00 2.12
6765 11994 5.000591 TGGCAACTAATTCTGATCGTGAAA 58.999 37.500 5.30 0.00 37.61 2.69
6862 12091 2.676748 TCCACCAAAGAGCCACAAAAT 58.323 42.857 0.00 0.00 0.00 1.82
7199 12429 4.456662 AGATAGAGACAGGAACGGGTAT 57.543 45.455 0.00 0.00 0.00 2.73
7334 12566 1.673920 GAGAGAAGAGGCGACGAAGAT 59.326 52.381 0.00 0.00 0.00 2.40
7354 12586 5.805728 AGATGAAGAACGGTACAGGAAATT 58.194 37.500 0.00 0.00 0.00 1.82
7370 12602 7.955918 ACAGGAAATTGCAGAGATAAAACTTT 58.044 30.769 0.00 0.00 0.00 2.66
7424 12657 7.681939 TTCTAATCTGGTTGATGTTTGTACC 57.318 36.000 0.00 0.00 35.21 3.34
7428 12661 4.787551 TCTGGTTGATGTTTGTACCTGTT 58.212 39.130 0.00 0.00 33.07 3.16
7430 12663 4.787551 TGGTTGATGTTTGTACCTGTTCT 58.212 39.130 0.00 0.00 0.00 3.01
7431 12664 5.197451 TGGTTGATGTTTGTACCTGTTCTT 58.803 37.500 0.00 0.00 0.00 2.52
7432 12665 5.654650 TGGTTGATGTTTGTACCTGTTCTTT 59.345 36.000 0.00 0.00 0.00 2.52
7434 12667 5.766150 TGATGTTTGTACCTGTTCTTTGG 57.234 39.130 0.00 0.00 0.00 3.28
7548 12820 0.675633 ATTGGTTTCCACAGCAGTGC 59.324 50.000 7.13 7.13 44.53 4.40
7788 13060 1.576356 CTCGGCAATAGTTCTGAGCC 58.424 55.000 0.00 0.00 41.86 4.70
7814 13086 2.244651 GCCGTGTGAAGCGTCTGTT 61.245 57.895 0.31 0.00 0.00 3.16
7872 13144 1.522900 CCAACCCATACTCCCCATCT 58.477 55.000 0.00 0.00 0.00 2.90
7882 13154 2.244117 CTCCCCATCTGTCCACCACG 62.244 65.000 0.00 0.00 0.00 4.94
7946 13220 2.850833 TCCATTCCCAACTCCATCTCT 58.149 47.619 0.00 0.00 0.00 3.10
8085 13367 3.205282 AGATGGATTGGTTAAGAAGGGGG 59.795 47.826 0.00 0.00 0.00 5.40
8100 13382 3.753787 GGGGGAATCCATGATCACC 57.246 57.895 0.00 0.00 37.22 4.02
8137 13419 2.596553 AAAAGTGTCACGCCCACCGA 62.597 55.000 0.00 0.00 41.02 4.69
8143 13425 3.273834 CACGCCCACCGAACGTTT 61.274 61.111 0.46 0.00 38.09 3.60
8214 13497 2.654987 GCCGCTAGCTTTCAATTATGC 58.345 47.619 13.93 0.00 38.99 3.14
8249 13532 2.574006 TTGCTGAACTGAGGCAATCT 57.426 45.000 0.00 0.00 40.38 2.40
8289 13572 3.081409 CTACCCCAGGACCCCGTG 61.081 72.222 0.00 0.00 0.00 4.94
8308 13591 1.755959 TGCGCATTTAATCTGCCCATT 59.244 42.857 5.66 0.00 36.24 3.16
8391 13674 1.112315 GTGCCCATGTGTCAACCCAA 61.112 55.000 0.00 0.00 0.00 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.038659 TGTTTCAAAGCAAAGAGGGGG 58.961 47.619 0.00 0.00 0.00 5.40
4 5 3.457234 GTTGTTTCAAAGCAAAGAGGGG 58.543 45.455 0.00 0.00 30.91 4.79
5 6 3.115554 CGTTGTTTCAAAGCAAAGAGGG 58.884 45.455 0.33 0.00 32.25 4.30
6 7 3.115554 CCGTTGTTTCAAAGCAAAGAGG 58.884 45.455 6.78 2.51 32.25 3.69
7 8 3.791353 GTCCGTTGTTTCAAAGCAAAGAG 59.209 43.478 6.78 0.00 32.25 2.85
8 9 3.428316 GGTCCGTTGTTTCAAAGCAAAGA 60.428 43.478 6.78 0.00 32.25 2.52
9 10 2.857748 GGTCCGTTGTTTCAAAGCAAAG 59.142 45.455 0.00 0.00 30.91 2.77
10 11 2.231478 TGGTCCGTTGTTTCAAAGCAAA 59.769 40.909 0.00 0.00 30.91 3.68
11 12 1.819288 TGGTCCGTTGTTTCAAAGCAA 59.181 42.857 0.00 0.00 0.00 3.91
12 13 1.403679 CTGGTCCGTTGTTTCAAAGCA 59.596 47.619 0.00 0.00 0.00 3.91
13 14 1.404035 ACTGGTCCGTTGTTTCAAAGC 59.596 47.619 0.00 0.00 0.00 3.51
14 15 3.434637 CAACTGGTCCGTTGTTTCAAAG 58.565 45.455 14.65 0.00 39.45 2.77
15 16 2.416162 GCAACTGGTCCGTTGTTTCAAA 60.416 45.455 20.37 0.00 44.61 2.69
16 17 1.133407 GCAACTGGTCCGTTGTTTCAA 59.867 47.619 20.37 0.00 44.61 2.69
17 18 0.736053 GCAACTGGTCCGTTGTTTCA 59.264 50.000 20.37 0.00 44.61 2.69
18 19 0.736053 TGCAACTGGTCCGTTGTTTC 59.264 50.000 20.37 10.09 44.61 2.78
19 20 1.178276 TTGCAACTGGTCCGTTGTTT 58.822 45.000 20.37 0.00 44.61 2.83
20 21 1.135228 GTTTGCAACTGGTCCGTTGTT 60.135 47.619 20.37 8.15 44.61 2.83
21 22 0.454196 GTTTGCAACTGGTCCGTTGT 59.546 50.000 20.37 3.16 44.61 3.32
22 23 0.248866 GGTTTGCAACTGGTCCGTTG 60.249 55.000 17.18 17.18 45.35 4.10
23 24 1.388837 GGGTTTGCAACTGGTCCGTT 61.389 55.000 0.00 0.00 0.00 4.44
24 25 1.826487 GGGTTTGCAACTGGTCCGT 60.826 57.895 0.00 0.00 0.00 4.69
25 26 2.561037 GGGGTTTGCAACTGGTCCG 61.561 63.158 0.00 0.00 0.00 4.79
26 27 2.561037 CGGGGTTTGCAACTGGTCC 61.561 63.158 0.00 0.00 0.00 4.46
27 28 1.388837 AACGGGGTTTGCAACTGGTC 61.389 55.000 0.00 0.00 0.00 4.02
28 29 0.973496 AAACGGGGTTTGCAACTGGT 60.973 50.000 0.00 0.00 34.23 4.00
29 30 0.249280 GAAACGGGGTTTGCAACTGG 60.249 55.000 0.00 0.00 35.77 4.00
30 31 0.249280 GGAAACGGGGTTTGCAACTG 60.249 55.000 0.00 0.00 42.08 3.16
31 32 2.120765 GGAAACGGGGTTTGCAACT 58.879 52.632 0.00 0.00 42.08 3.16
32 33 4.742274 GGAAACGGGGTTTGCAAC 57.258 55.556 0.00 0.00 42.08 4.17
44 45 2.781646 CTGAGCGTTTTGTTTCGGAAAC 59.218 45.455 23.27 23.27 41.73 2.78
45 46 2.223386 CCTGAGCGTTTTGTTTCGGAAA 60.223 45.455 0.00 0.00 0.00 3.13
46 47 1.332375 CCTGAGCGTTTTGTTTCGGAA 59.668 47.619 0.00 0.00 0.00 4.30
47 48 0.941542 CCTGAGCGTTTTGTTTCGGA 59.058 50.000 0.00 0.00 0.00 4.55
48 49 0.661020 ACCTGAGCGTTTTGTTTCGG 59.339 50.000 0.00 0.00 0.00 4.30
49 50 2.542595 AGTACCTGAGCGTTTTGTTTCG 59.457 45.455 0.00 0.00 0.00 3.46
50 51 3.362693 CGAGTACCTGAGCGTTTTGTTTC 60.363 47.826 0.00 0.00 0.00 2.78
51 52 2.542595 CGAGTACCTGAGCGTTTTGTTT 59.457 45.455 0.00 0.00 0.00 2.83
52 53 2.132762 CGAGTACCTGAGCGTTTTGTT 58.867 47.619 0.00 0.00 0.00 2.83
53 54 1.604693 CCGAGTACCTGAGCGTTTTGT 60.605 52.381 0.00 0.00 0.00 2.83
54 55 1.068474 CCGAGTACCTGAGCGTTTTG 58.932 55.000 0.00 0.00 0.00 2.44
55 56 0.677842 ACCGAGTACCTGAGCGTTTT 59.322 50.000 0.00 0.00 0.00 2.43
56 57 0.677842 AACCGAGTACCTGAGCGTTT 59.322 50.000 0.00 0.00 0.00 3.60
57 58 0.038526 CAACCGAGTACCTGAGCGTT 60.039 55.000 0.00 0.00 0.00 4.84
58 59 1.585006 CAACCGAGTACCTGAGCGT 59.415 57.895 0.00 0.00 0.00 5.07
59 60 1.805945 GCAACCGAGTACCTGAGCG 60.806 63.158 0.00 0.00 0.00 5.03
60 61 0.737715 CTGCAACCGAGTACCTGAGC 60.738 60.000 0.00 0.00 0.00 4.26
61 62 0.888619 TCTGCAACCGAGTACCTGAG 59.111 55.000 0.00 0.00 0.00 3.35
62 63 1.334160 TTCTGCAACCGAGTACCTGA 58.666 50.000 0.00 0.00 0.00 3.86
63 64 2.163818 TTTCTGCAACCGAGTACCTG 57.836 50.000 0.00 0.00 0.00 4.00
64 65 2.490991 GTTTTCTGCAACCGAGTACCT 58.509 47.619 0.00 0.00 0.00 3.08
65 66 1.193874 CGTTTTCTGCAACCGAGTACC 59.806 52.381 0.00 0.00 0.00 3.34
66 67 1.862827 ACGTTTTCTGCAACCGAGTAC 59.137 47.619 0.00 0.00 0.00 2.73
67 68 1.862201 CACGTTTTCTGCAACCGAGTA 59.138 47.619 0.00 0.00 0.00 2.59
68 69 0.655733 CACGTTTTCTGCAACCGAGT 59.344 50.000 0.00 0.00 0.00 4.18
69 70 0.655733 ACACGTTTTCTGCAACCGAG 59.344 50.000 0.00 0.00 0.00 4.63
70 71 0.375454 CACACGTTTTCTGCAACCGA 59.625 50.000 0.00 0.00 0.00 4.69
71 72 1.199852 GCACACGTTTTCTGCAACCG 61.200 55.000 0.00 0.00 0.00 4.44
72 73 0.179150 TGCACACGTTTTCTGCAACC 60.179 50.000 4.85 0.00 37.97 3.77
73 74 1.518102 CATGCACACGTTTTCTGCAAC 59.482 47.619 10.11 0.00 43.85 4.17
74 75 1.535649 CCATGCACACGTTTTCTGCAA 60.536 47.619 10.11 0.00 43.85 4.08
75 76 0.030504 CCATGCACACGTTTTCTGCA 59.969 50.000 8.85 8.85 44.71 4.41
76 77 0.310543 TCCATGCACACGTTTTCTGC 59.689 50.000 0.00 0.00 0.00 4.26
77 78 1.664016 GCTCCATGCACACGTTTTCTG 60.664 52.381 0.00 0.00 42.31 3.02
78 79 0.593128 GCTCCATGCACACGTTTTCT 59.407 50.000 0.00 0.00 42.31 2.52
79 80 0.725784 CGCTCCATGCACACGTTTTC 60.726 55.000 0.00 0.00 43.06 2.29
80 81 1.282570 CGCTCCATGCACACGTTTT 59.717 52.632 0.00 0.00 43.06 2.43
81 82 2.616330 CCGCTCCATGCACACGTTT 61.616 57.895 0.00 0.00 43.06 3.60
82 83 3.049674 CCGCTCCATGCACACGTT 61.050 61.111 0.00 0.00 43.06 3.99
85 86 2.672996 AACCCGCTCCATGCACAC 60.673 61.111 0.00 0.00 43.06 3.82
86 87 2.672651 CAACCCGCTCCATGCACA 60.673 61.111 0.00 0.00 43.06 4.57
87 88 4.120331 GCAACCCGCTCCATGCAC 62.120 66.667 0.00 0.00 43.06 4.57
97 98 3.966026 GACGGACGAGAGCAACCCG 62.966 68.421 0.00 0.00 45.09 5.28
98 99 2.126031 GACGGACGAGAGCAACCC 60.126 66.667 0.00 0.00 0.00 4.11
99 100 0.454600 TATGACGGACGAGAGCAACC 59.545 55.000 0.00 0.00 0.00 3.77
100 101 2.223502 TGATATGACGGACGAGAGCAAC 60.224 50.000 0.00 0.00 0.00 4.17
101 102 2.021457 TGATATGACGGACGAGAGCAA 58.979 47.619 0.00 0.00 0.00 3.91
102 103 1.675552 TGATATGACGGACGAGAGCA 58.324 50.000 0.00 0.00 0.00 4.26
103 104 2.223502 TGTTGATATGACGGACGAGAGC 60.224 50.000 0.00 0.00 0.00 4.09
104 105 3.312697 TCTGTTGATATGACGGACGAGAG 59.687 47.826 0.00 0.00 0.00 3.20
105 106 3.064958 GTCTGTTGATATGACGGACGAGA 59.935 47.826 10.45 0.00 41.84 4.04
106 107 3.364062 GTCTGTTGATATGACGGACGAG 58.636 50.000 10.45 0.00 41.84 4.18
107 108 3.416119 GTCTGTTGATATGACGGACGA 57.584 47.619 10.45 0.00 41.84 4.20
110 111 4.693283 GGATTGTCTGTTGATATGACGGA 58.307 43.478 0.00 0.00 33.81 4.69
111 112 3.490896 CGGATTGTCTGTTGATATGACGG 59.509 47.826 0.00 0.00 33.81 4.79
112 113 4.359706 TCGGATTGTCTGTTGATATGACG 58.640 43.478 0.00 0.00 33.81 4.35
113 114 5.178252 CCATCGGATTGTCTGTTGATATGAC 59.822 44.000 0.00 0.00 0.00 3.06
114 115 5.070313 TCCATCGGATTGTCTGTTGATATGA 59.930 40.000 0.00 0.00 0.00 2.15
115 116 5.178252 GTCCATCGGATTGTCTGTTGATATG 59.822 44.000 0.00 0.00 32.73 1.78
116 117 5.163311 TGTCCATCGGATTGTCTGTTGATAT 60.163 40.000 0.00 0.00 32.73 1.63
117 118 4.161377 TGTCCATCGGATTGTCTGTTGATA 59.839 41.667 0.00 0.00 32.73 2.15
118 119 3.055167 TGTCCATCGGATTGTCTGTTGAT 60.055 43.478 0.00 0.00 32.73 2.57
119 120 2.301583 TGTCCATCGGATTGTCTGTTGA 59.698 45.455 0.00 0.00 32.73 3.18
120 121 2.416547 GTGTCCATCGGATTGTCTGTTG 59.583 50.000 0.00 0.00 32.73 3.33
121 122 2.038426 TGTGTCCATCGGATTGTCTGTT 59.962 45.455 0.00 0.00 32.73 3.16
122 123 1.623311 TGTGTCCATCGGATTGTCTGT 59.377 47.619 0.00 0.00 32.73 3.41
123 124 2.094026 TCTGTGTCCATCGGATTGTCTG 60.094 50.000 0.00 0.00 32.73 3.51
124 125 2.167281 CTCTGTGTCCATCGGATTGTCT 59.833 50.000 0.00 0.00 32.73 3.41
125 126 2.544685 CTCTGTGTCCATCGGATTGTC 58.455 52.381 0.00 0.00 32.73 3.18
126 127 1.406069 GCTCTGTGTCCATCGGATTGT 60.406 52.381 0.00 0.00 32.73 2.71
127 128 1.293924 GCTCTGTGTCCATCGGATTG 58.706 55.000 0.00 0.00 32.73 2.67
128 129 0.179000 GGCTCTGTGTCCATCGGATT 59.821 55.000 0.00 0.00 32.73 3.01
129 130 1.826024 GGCTCTGTGTCCATCGGAT 59.174 57.895 0.00 0.00 32.73 4.18
130 131 2.710902 CGGCTCTGTGTCCATCGGA 61.711 63.158 0.00 0.00 0.00 4.55
131 132 2.202797 CGGCTCTGTGTCCATCGG 60.203 66.667 0.00 0.00 0.00 4.18
132 133 1.517257 GTCGGCTCTGTGTCCATCG 60.517 63.158 0.00 0.00 0.00 3.84
133 134 1.517257 CGTCGGCTCTGTGTCCATC 60.517 63.158 0.00 0.00 0.00 3.51
134 135 2.573869 CGTCGGCTCTGTGTCCAT 59.426 61.111 0.00 0.00 0.00 3.41
135 136 3.680786 CCGTCGGCTCTGTGTCCA 61.681 66.667 0.00 0.00 0.00 4.02
136 137 3.371063 TCCGTCGGCTCTGTGTCC 61.371 66.667 6.34 0.00 0.00 4.02
137 138 2.126424 GTCCGTCGGCTCTGTGTC 60.126 66.667 6.34 0.00 0.00 3.67
138 139 4.039357 CGTCCGTCGGCTCTGTGT 62.039 66.667 6.34 0.00 35.71 3.72
141 142 4.838486 GAGCGTCCGTCGGCTCTG 62.838 72.222 6.34 0.00 38.57 3.35
156 157 1.371022 CCGATCGATCCTGCGTGAG 60.371 63.158 18.66 2.95 0.00 3.51
157 158 2.721859 CCGATCGATCCTGCGTGA 59.278 61.111 18.66 0.00 0.00 4.35
158 159 3.032609 GCCGATCGATCCTGCGTG 61.033 66.667 18.66 4.39 0.00 5.34
159 160 3.219928 AGCCGATCGATCCTGCGT 61.220 61.111 18.66 9.49 0.00 5.24
160 161 2.683820 TTCAGCCGATCGATCCTGCG 62.684 60.000 18.66 16.32 0.00 5.18
161 162 0.943359 CTTCAGCCGATCGATCCTGC 60.943 60.000 18.66 20.42 0.00 4.85
162 163 0.319383 CCTTCAGCCGATCGATCCTG 60.319 60.000 18.66 19.67 0.00 3.86
163 164 1.467678 CCCTTCAGCCGATCGATCCT 61.468 60.000 18.66 8.98 0.00 3.24
164 165 1.005630 CCCTTCAGCCGATCGATCC 60.006 63.158 18.66 6.69 0.00 3.36
165 166 1.005630 CCCCTTCAGCCGATCGATC 60.006 63.158 18.66 15.68 0.00 3.69
166 167 1.457643 TCCCCTTCAGCCGATCGAT 60.458 57.895 18.66 0.00 0.00 3.59
167 168 2.043349 TCCCCTTCAGCCGATCGA 60.043 61.111 18.66 0.00 0.00 3.59
168 169 2.419198 CTCCCCTTCAGCCGATCG 59.581 66.667 8.51 8.51 0.00 3.69
169 170 1.977293 AAGCTCCCCTTCAGCCGATC 61.977 60.000 0.00 0.00 37.63 3.69
170 171 1.566298 AAAGCTCCCCTTCAGCCGAT 61.566 55.000 0.00 0.00 37.63 4.18
171 172 1.779061 AAAAGCTCCCCTTCAGCCGA 61.779 55.000 0.00 0.00 37.63 5.54
172 173 1.303643 AAAAGCTCCCCTTCAGCCG 60.304 57.895 0.00 0.00 37.63 5.52
173 174 0.967887 GGAAAAGCTCCCCTTCAGCC 60.968 60.000 0.00 0.00 38.44 4.85
174 175 0.251341 TGGAAAAGCTCCCCTTCAGC 60.251 55.000 0.00 0.00 44.69 4.26
175 176 2.494870 CAATGGAAAAGCTCCCCTTCAG 59.505 50.000 0.00 0.00 44.69 3.02
176 177 2.109834 TCAATGGAAAAGCTCCCCTTCA 59.890 45.455 0.00 0.00 44.69 3.02
177 178 2.757314 CTCAATGGAAAAGCTCCCCTTC 59.243 50.000 0.00 0.00 44.69 3.46
178 179 2.812658 CTCAATGGAAAAGCTCCCCTT 58.187 47.619 0.00 0.00 44.69 3.95
179 180 1.618074 GCTCAATGGAAAAGCTCCCCT 60.618 52.381 0.00 0.00 44.69 4.79
180 181 0.820226 GCTCAATGGAAAAGCTCCCC 59.180 55.000 0.00 0.00 44.69 4.81
181 182 1.844687 AGCTCAATGGAAAAGCTCCC 58.155 50.000 0.00 0.00 42.58 4.30
182 183 4.641989 TCATTAGCTCAATGGAAAAGCTCC 59.358 41.667 12.83 0.00 44.89 4.70
183 184 5.824904 TCATTAGCTCAATGGAAAAGCTC 57.175 39.130 12.83 0.00 44.89 4.09
207 208 9.897744 CGTCAGTAAATTGGCATATTGAATAAT 57.102 29.630 0.00 0.00 0.00 1.28
208 209 8.898761 ACGTCAGTAAATTGGCATATTGAATAA 58.101 29.630 0.00 0.00 0.00 1.40
209 210 8.445275 ACGTCAGTAAATTGGCATATTGAATA 57.555 30.769 0.00 0.00 0.00 1.75
210 211 7.333528 ACGTCAGTAAATTGGCATATTGAAT 57.666 32.000 0.00 0.00 0.00 2.57
211 212 6.751514 ACGTCAGTAAATTGGCATATTGAA 57.248 33.333 0.00 0.00 0.00 2.69
212 213 6.819146 TGTACGTCAGTAAATTGGCATATTGA 59.181 34.615 0.00 0.00 34.16 2.57
213 214 7.010697 TGTACGTCAGTAAATTGGCATATTG 57.989 36.000 0.00 0.00 34.16 1.90
214 215 7.639039 CATGTACGTCAGTAAATTGGCATATT 58.361 34.615 0.00 0.00 34.16 1.28
215 216 6.293407 GCATGTACGTCAGTAAATTGGCATAT 60.293 38.462 0.00 0.00 34.16 1.78
216 217 5.007234 GCATGTACGTCAGTAAATTGGCATA 59.993 40.000 0.00 0.00 34.16 3.14
217 218 4.201910 GCATGTACGTCAGTAAATTGGCAT 60.202 41.667 0.00 0.00 34.16 4.40
218 219 3.126171 GCATGTACGTCAGTAAATTGGCA 59.874 43.478 0.00 0.00 34.16 4.92
219 220 3.374058 AGCATGTACGTCAGTAAATTGGC 59.626 43.478 0.00 0.00 34.16 4.52
220 221 4.201812 CCAGCATGTACGTCAGTAAATTGG 60.202 45.833 0.00 0.00 34.16 3.16
221 222 4.391830 ACCAGCATGTACGTCAGTAAATTG 59.608 41.667 0.00 0.00 34.16 2.32
222 223 4.391830 CACCAGCATGTACGTCAGTAAATT 59.608 41.667 0.00 0.00 34.16 1.82
223 224 3.932710 CACCAGCATGTACGTCAGTAAAT 59.067 43.478 0.00 0.00 34.16 1.40
224 225 3.006003 TCACCAGCATGTACGTCAGTAAA 59.994 43.478 0.00 0.00 34.16 2.01
225 226 2.559231 TCACCAGCATGTACGTCAGTAA 59.441 45.455 0.00 0.00 34.16 2.24
226 227 2.164338 TCACCAGCATGTACGTCAGTA 58.836 47.619 0.00 0.00 0.00 2.74
227 228 0.966179 TCACCAGCATGTACGTCAGT 59.034 50.000 0.00 0.00 0.00 3.41
228 229 2.159184 AGATCACCAGCATGTACGTCAG 60.159 50.000 0.00 0.00 0.00 3.51
229 230 1.824852 AGATCACCAGCATGTACGTCA 59.175 47.619 0.00 0.00 0.00 4.35
230 231 2.586258 AGATCACCAGCATGTACGTC 57.414 50.000 0.00 0.00 0.00 4.34
231 232 2.497675 AGAAGATCACCAGCATGTACGT 59.502 45.455 0.00 0.00 0.00 3.57
232 233 3.170791 AGAAGATCACCAGCATGTACG 57.829 47.619 0.00 0.00 0.00 3.67
233 234 5.525378 CCTAAAGAAGATCACCAGCATGTAC 59.475 44.000 0.00 0.00 0.00 2.90
234 235 5.396772 CCCTAAAGAAGATCACCAGCATGTA 60.397 44.000 0.00 0.00 0.00 2.29
235 236 4.521146 CCTAAAGAAGATCACCAGCATGT 58.479 43.478 0.00 0.00 0.00 3.21
236 237 3.881688 CCCTAAAGAAGATCACCAGCATG 59.118 47.826 0.00 0.00 0.00 4.06
237 238 3.525199 ACCCTAAAGAAGATCACCAGCAT 59.475 43.478 0.00 0.00 0.00 3.79
238 239 2.912956 ACCCTAAAGAAGATCACCAGCA 59.087 45.455 0.00 0.00 0.00 4.41
239 240 3.274288 CACCCTAAAGAAGATCACCAGC 58.726 50.000 0.00 0.00 0.00 4.85
240 241 4.256920 CACACCCTAAAGAAGATCACCAG 58.743 47.826 0.00 0.00 0.00 4.00
241 242 3.650942 ACACACCCTAAAGAAGATCACCA 59.349 43.478 0.00 0.00 0.00 4.17
242 243 4.287766 ACACACCCTAAAGAAGATCACC 57.712 45.455 0.00 0.00 0.00 4.02
243 244 5.048713 CCAAACACACCCTAAAGAAGATCAC 60.049 44.000 0.00 0.00 0.00 3.06
244 245 5.070001 CCAAACACACCCTAAAGAAGATCA 58.930 41.667 0.00 0.00 0.00 2.92
245 246 5.070685 ACCAAACACACCCTAAAGAAGATC 58.929 41.667 0.00 0.00 0.00 2.75
246 247 5.061721 ACCAAACACACCCTAAAGAAGAT 57.938 39.130 0.00 0.00 0.00 2.40
247 248 4.513406 ACCAAACACACCCTAAAGAAGA 57.487 40.909 0.00 0.00 0.00 2.87
248 249 4.736464 GCAACCAAACACACCCTAAAGAAG 60.736 45.833 0.00 0.00 0.00 2.85
249 250 3.131400 GCAACCAAACACACCCTAAAGAA 59.869 43.478 0.00 0.00 0.00 2.52
250 251 2.691011 GCAACCAAACACACCCTAAAGA 59.309 45.455 0.00 0.00 0.00 2.52
251 252 2.428890 TGCAACCAAACACACCCTAAAG 59.571 45.455 0.00 0.00 0.00 1.85
252 253 2.428890 CTGCAACCAAACACACCCTAAA 59.571 45.455 0.00 0.00 0.00 1.85
253 254 2.028130 CTGCAACCAAACACACCCTAA 58.972 47.619 0.00 0.00 0.00 2.69
254 255 1.064314 ACTGCAACCAAACACACCCTA 60.064 47.619 0.00 0.00 0.00 3.53
255 256 0.324275 ACTGCAACCAAACACACCCT 60.324 50.000 0.00 0.00 0.00 4.34
256 257 0.102300 GACTGCAACCAAACACACCC 59.898 55.000 0.00 0.00 0.00 4.61
257 258 0.814457 TGACTGCAACCAAACACACC 59.186 50.000 0.00 0.00 0.00 4.16
258 259 1.201181 TGTGACTGCAACCAAACACAC 59.799 47.619 0.00 0.00 34.52 3.82
259 260 1.472082 CTGTGACTGCAACCAAACACA 59.528 47.619 0.00 0.00 36.44 3.72
260 261 1.202290 CCTGTGACTGCAACCAAACAC 60.202 52.381 0.00 0.00 0.00 3.32
261 262 1.102154 CCTGTGACTGCAACCAAACA 58.898 50.000 0.00 0.00 0.00 2.83
262 263 0.249031 GCCTGTGACTGCAACCAAAC 60.249 55.000 0.00 0.00 0.00 2.93
263 264 1.391157 GGCCTGTGACTGCAACCAAA 61.391 55.000 0.00 0.00 0.00 3.28
264 265 1.827789 GGCCTGTGACTGCAACCAA 60.828 57.895 0.00 0.00 0.00 3.67
265 266 2.203337 GGCCTGTGACTGCAACCA 60.203 61.111 0.00 0.00 0.00 3.67
266 267 3.357079 CGGCCTGTGACTGCAACC 61.357 66.667 0.00 0.00 0.00 3.77
267 268 3.357079 CCGGCCTGTGACTGCAAC 61.357 66.667 0.00 0.00 0.00 4.17
268 269 2.410322 ATTCCGGCCTGTGACTGCAA 62.410 55.000 0.00 0.00 0.00 4.08
269 270 2.894257 ATTCCGGCCTGTGACTGCA 61.894 57.895 0.00 0.00 0.00 4.41
270 271 2.045926 ATTCCGGCCTGTGACTGC 60.046 61.111 0.00 0.00 0.00 4.40
271 272 1.003355 ACATTCCGGCCTGTGACTG 60.003 57.895 0.00 1.92 0.00 3.51
272 273 1.296715 GACATTCCGGCCTGTGACT 59.703 57.895 12.72 0.00 0.00 3.41
273 274 1.003839 TGACATTCCGGCCTGTGAC 60.004 57.895 12.72 2.86 0.00 3.67
274 275 1.003839 GTGACATTCCGGCCTGTGA 60.004 57.895 12.72 2.65 0.00 3.58
275 276 2.390599 CGTGACATTCCGGCCTGTG 61.391 63.158 12.72 3.92 0.00 3.66
276 277 2.047274 CGTGACATTCCGGCCTGT 60.047 61.111 8.28 8.28 0.00 4.00
277 278 2.819595 CCGTGACATTCCGGCCTG 60.820 66.667 0.00 0.00 37.43 4.85
278 279 4.096003 CCCGTGACATTCCGGCCT 62.096 66.667 0.00 0.00 42.87 5.19
279 280 4.404098 ACCCGTGACATTCCGGCC 62.404 66.667 0.00 0.00 42.87 6.13
280 281 2.818274 GACCCGTGACATTCCGGC 60.818 66.667 0.00 0.00 42.87 6.13
281 282 1.447838 CTGACCCGTGACATTCCGG 60.448 63.158 0.00 0.00 43.82 5.14
282 283 0.736325 GTCTGACCCGTGACATTCCG 60.736 60.000 0.00 0.00 33.75 4.30
283 284 0.391263 GGTCTGACCCGTGACATTCC 60.391 60.000 16.14 0.00 35.11 3.01
284 285 3.139029 GGTCTGACCCGTGACATTC 57.861 57.895 16.14 0.00 35.11 2.67
294 295 0.107165 GCCTGGTAATGGGTCTGACC 60.107 60.000 18.65 18.65 37.60 4.02
295 296 0.107165 GGCCTGGTAATGGGTCTGAC 60.107 60.000 0.00 0.00 0.00 3.51
296 297 0.253160 AGGCCTGGTAATGGGTCTGA 60.253 55.000 3.11 0.00 36.07 3.27
297 298 0.181350 GAGGCCTGGTAATGGGTCTG 59.819 60.000 12.00 0.00 37.72 3.51
298 299 0.253160 TGAGGCCTGGTAATGGGTCT 60.253 55.000 12.00 0.00 40.61 3.85
299 300 0.846693 ATGAGGCCTGGTAATGGGTC 59.153 55.000 12.00 0.00 0.00 4.46
300 301 1.215423 GAATGAGGCCTGGTAATGGGT 59.785 52.381 12.00 0.00 0.00 4.51
301 302 1.479389 GGAATGAGGCCTGGTAATGGG 60.479 57.143 12.00 0.00 0.00 4.00
302 303 1.215173 TGGAATGAGGCCTGGTAATGG 59.785 52.381 12.00 0.00 0.00 3.16
303 304 2.579873 CTGGAATGAGGCCTGGTAATG 58.420 52.381 12.00 0.00 0.00 1.90
304 305 1.133668 GCTGGAATGAGGCCTGGTAAT 60.134 52.381 12.00 0.00 0.00 1.89
305 306 0.255890 GCTGGAATGAGGCCTGGTAA 59.744 55.000 12.00 0.00 0.00 2.85
306 307 0.913934 TGCTGGAATGAGGCCTGGTA 60.914 55.000 12.00 0.00 0.00 3.25
307 308 1.578215 ATGCTGGAATGAGGCCTGGT 61.578 55.000 12.00 0.00 0.00 4.00
308 309 0.396695 AATGCTGGAATGAGGCCTGG 60.397 55.000 12.00 0.00 0.00 4.45
309 310 1.136305 CAAATGCTGGAATGAGGCCTG 59.864 52.381 12.00 0.00 0.00 4.85
310 311 1.481871 CAAATGCTGGAATGAGGCCT 58.518 50.000 3.86 3.86 0.00 5.19
321 322 1.131126 CGGTTGCTCTACCAAATGCTG 59.869 52.381 1.82 0.00 38.12 4.41
322 323 1.453155 CGGTTGCTCTACCAAATGCT 58.547 50.000 1.82 0.00 38.12 3.79
323 324 0.451783 CCGGTTGCTCTACCAAATGC 59.548 55.000 0.00 0.00 38.12 3.56
324 325 2.107950 TCCGGTTGCTCTACCAAATG 57.892 50.000 0.00 0.00 38.12 2.32
325 326 2.224670 TGTTCCGGTTGCTCTACCAAAT 60.225 45.455 0.00 0.00 38.12 2.32
326 327 1.141254 TGTTCCGGTTGCTCTACCAAA 59.859 47.619 0.00 0.00 38.12 3.28
327 328 0.759959 TGTTCCGGTTGCTCTACCAA 59.240 50.000 0.00 0.00 38.12 3.67
328 329 0.320374 CTGTTCCGGTTGCTCTACCA 59.680 55.000 0.00 0.00 38.12 3.25
329 330 0.606604 TCTGTTCCGGTTGCTCTACC 59.393 55.000 0.00 0.00 34.72 3.18
330 331 2.067013 GTTCTGTTCCGGTTGCTCTAC 58.933 52.381 0.00 0.00 0.00 2.59
331 332 1.001633 GGTTCTGTTCCGGTTGCTCTA 59.998 52.381 0.00 0.00 0.00 2.43
332 333 0.250338 GGTTCTGTTCCGGTTGCTCT 60.250 55.000 0.00 0.00 0.00 4.09
333 334 1.235281 GGGTTCTGTTCCGGTTGCTC 61.235 60.000 0.00 0.00 0.00 4.26
334 335 1.228154 GGGTTCTGTTCCGGTTGCT 60.228 57.895 0.00 0.00 0.00 3.91
335 336 1.527380 TGGGTTCTGTTCCGGTTGC 60.527 57.895 0.00 0.00 0.00 4.17
336 337 0.179029 AGTGGGTTCTGTTCCGGTTG 60.179 55.000 0.00 0.00 0.00 3.77
337 338 0.108019 GAGTGGGTTCTGTTCCGGTT 59.892 55.000 0.00 0.00 0.00 4.44
338 339 1.752833 GAGTGGGTTCTGTTCCGGT 59.247 57.895 0.00 0.00 0.00 5.28
339 340 1.374252 CGAGTGGGTTCTGTTCCGG 60.374 63.158 0.00 0.00 0.00 5.14
340 341 0.666577 GACGAGTGGGTTCTGTTCCG 60.667 60.000 0.00 0.00 0.00 4.30
341 342 0.320508 GGACGAGTGGGTTCTGTTCC 60.321 60.000 0.00 0.00 0.00 3.62
342 343 0.320508 GGGACGAGTGGGTTCTGTTC 60.321 60.000 0.00 0.00 0.00 3.18
343 344 1.752833 GGGACGAGTGGGTTCTGTT 59.247 57.895 0.00 0.00 0.00 3.16
344 345 2.214920 GGGGACGAGTGGGTTCTGT 61.215 63.158 0.00 0.00 0.00 3.41
345 346 1.764571 TTGGGGACGAGTGGGTTCTG 61.765 60.000 0.00 0.00 0.00 3.02
346 347 0.840722 ATTGGGGACGAGTGGGTTCT 60.841 55.000 0.00 0.00 0.00 3.01
347 348 0.392595 GATTGGGGACGAGTGGGTTC 60.393 60.000 0.00 0.00 0.00 3.62
348 349 1.131303 TGATTGGGGACGAGTGGGTT 61.131 55.000 0.00 0.00 0.00 4.11
349 350 1.131303 TTGATTGGGGACGAGTGGGT 61.131 55.000 0.00 0.00 0.00 4.51
350 351 0.676782 GTTGATTGGGGACGAGTGGG 60.677 60.000 0.00 0.00 0.00 4.61
351 352 1.019278 CGTTGATTGGGGACGAGTGG 61.019 60.000 0.00 0.00 38.99 4.00
352 353 0.037697 TCGTTGATTGGGGACGAGTG 60.038 55.000 0.00 0.00 40.46 3.51
353 354 0.682852 TTCGTTGATTGGGGACGAGT 59.317 50.000 0.00 0.00 45.18 4.18
354 355 2.024176 ATTCGTTGATTGGGGACGAG 57.976 50.000 0.00 0.00 45.18 4.18
355 356 3.830744 ATATTCGTTGATTGGGGACGA 57.169 42.857 0.00 0.00 43.22 4.20
356 357 3.059868 CGAATATTCGTTGATTGGGGACG 60.060 47.826 26.11 0.00 45.09 4.79
357 358 4.468095 CGAATATTCGTTGATTGGGGAC 57.532 45.455 26.11 0.00 45.09 4.46
378 379 0.812549 GAGTGGAGAGGACTCGTTCC 59.187 60.000 1.72 1.72 46.33 3.62
379 380 0.812549 GGAGTGGAGAGGACTCGTTC 59.187 60.000 0.00 0.00 43.44 3.95
380 381 0.612453 GGGAGTGGAGAGGACTCGTT 60.612 60.000 0.00 0.00 43.44 3.85
381 382 1.000646 GGGAGTGGAGAGGACTCGT 60.001 63.158 0.00 0.00 43.44 4.18
382 383 2.115911 CGGGAGTGGAGAGGACTCG 61.116 68.421 0.00 0.00 43.44 4.18
383 384 2.419739 GCGGGAGTGGAGAGGACTC 61.420 68.421 0.00 0.00 41.94 3.36
384 385 2.363147 GCGGGAGTGGAGAGGACT 60.363 66.667 0.00 0.00 0.00 3.85
385 386 2.283529 TTGCGGGAGTGGAGAGGAC 61.284 63.158 0.00 0.00 0.00 3.85
386 387 2.119611 TTGCGGGAGTGGAGAGGA 59.880 61.111 0.00 0.00 0.00 3.71
387 388 0.970937 TAGTTGCGGGAGTGGAGAGG 60.971 60.000 0.00 0.00 0.00 3.69
388 389 1.115467 ATAGTTGCGGGAGTGGAGAG 58.885 55.000 0.00 0.00 0.00 3.20
389 390 2.029623 GTATAGTTGCGGGAGTGGAGA 58.970 52.381 0.00 0.00 0.00 3.71
390 391 1.068741 GGTATAGTTGCGGGAGTGGAG 59.931 57.143 0.00 0.00 0.00 3.86
391 392 1.117150 GGTATAGTTGCGGGAGTGGA 58.883 55.000 0.00 0.00 0.00 4.02
392 393 1.120530 AGGTATAGTTGCGGGAGTGG 58.879 55.000 0.00 0.00 0.00 4.00
393 394 1.202533 CCAGGTATAGTTGCGGGAGTG 60.203 57.143 0.00 0.00 0.00 3.51
394 395 1.120530 CCAGGTATAGTTGCGGGAGT 58.879 55.000 0.00 0.00 0.00 3.85
395 396 0.249911 GCCAGGTATAGTTGCGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
396 397 1.692173 GGCCAGGTATAGTTGCGGGA 61.692 60.000 0.00 0.00 0.00 5.14
397 398 1.227853 GGCCAGGTATAGTTGCGGG 60.228 63.158 0.00 0.00 0.00 6.13
398 399 0.108585 ATGGCCAGGTATAGTTGCGG 59.891 55.000 13.05 0.00 0.00 5.69
399 400 2.413837 GTATGGCCAGGTATAGTTGCG 58.586 52.381 13.05 0.00 0.00 4.85
400 401 2.372172 AGGTATGGCCAGGTATAGTTGC 59.628 50.000 13.05 0.00 40.61 4.17
401 402 3.306088 CGAGGTATGGCCAGGTATAGTTG 60.306 52.174 13.05 0.00 40.61 3.16
402 403 2.897969 CGAGGTATGGCCAGGTATAGTT 59.102 50.000 13.05 0.00 40.61 2.24
403 404 2.526432 CGAGGTATGGCCAGGTATAGT 58.474 52.381 13.05 0.00 40.61 2.12
404 405 1.825474 CCGAGGTATGGCCAGGTATAG 59.175 57.143 13.05 0.92 40.61 1.31
405 406 1.551560 CCCGAGGTATGGCCAGGTATA 60.552 57.143 13.05 0.00 40.61 1.47
406 407 0.836400 CCCGAGGTATGGCCAGGTAT 60.836 60.000 13.05 0.00 40.61 2.73
407 408 1.458777 CCCGAGGTATGGCCAGGTA 60.459 63.158 13.05 0.00 40.61 3.08
408 409 2.768344 CCCGAGGTATGGCCAGGT 60.768 66.667 13.05 0.00 40.61 4.00
409 410 4.256180 GCCCGAGGTATGGCCAGG 62.256 72.222 13.05 6.01 41.97 4.45
432 433 3.950794 TTGCGTCGGGCTTGGCTAG 62.951 63.158 0.00 0.00 44.05 3.42
433 434 3.538785 TTTGCGTCGGGCTTGGCTA 62.539 57.895 0.00 0.00 44.05 3.93
434 435 4.947147 TTTGCGTCGGGCTTGGCT 62.947 61.111 0.00 0.00 44.05 4.75
435 436 3.492311 TTTTTGCGTCGGGCTTGGC 62.492 57.895 0.00 0.00 44.05 4.52
436 437 2.725008 TTTTTGCGTCGGGCTTGG 59.275 55.556 0.00 0.00 44.05 3.61
471 472 1.736126 GTAAAAACTAGGCCCGACAGC 59.264 52.381 0.00 0.00 0.00 4.40
472 473 1.997606 CGTAAAAACTAGGCCCGACAG 59.002 52.381 0.00 0.00 0.00 3.51
473 474 1.940752 GCGTAAAAACTAGGCCCGACA 60.941 52.381 0.00 0.00 0.00 4.35
474 475 0.723414 GCGTAAAAACTAGGCCCGAC 59.277 55.000 0.00 0.00 0.00 4.79
475 476 0.391528 GGCGTAAAAACTAGGCCCGA 60.392 55.000 0.00 0.00 41.24 5.14
476 477 2.092374 GGCGTAAAAACTAGGCCCG 58.908 57.895 0.00 0.00 41.24 6.13
479 480 1.135489 GCTTGGGCGTAAAAACTAGGC 60.135 52.381 0.00 0.00 0.00 3.93
480 481 1.471287 GGCTTGGGCGTAAAAACTAGG 59.529 52.381 0.00 0.00 39.81 3.02
481 482 1.471287 GGGCTTGGGCGTAAAAACTAG 59.529 52.381 0.00 0.00 39.81 2.57
482 483 1.536940 GGGCTTGGGCGTAAAAACTA 58.463 50.000 0.00 0.00 39.81 2.24
483 484 1.520600 CGGGCTTGGGCGTAAAAACT 61.521 55.000 0.00 0.00 39.81 2.66
484 485 1.081041 CGGGCTTGGGCGTAAAAAC 60.081 57.895 0.00 0.00 39.81 2.43
485 486 2.269529 CCGGGCTTGGGCGTAAAAA 61.270 57.895 0.00 0.00 39.81 1.94
486 487 2.673687 CCGGGCTTGGGCGTAAAA 60.674 61.111 0.00 0.00 39.81 1.52
495 496 3.989787 GTGTTTGGGCCGGGCTTG 61.990 66.667 28.80 0.00 0.00 4.01
496 497 2.433646 TATGTGTTTGGGCCGGGCTT 62.434 55.000 28.80 5.37 0.00 4.35
497 498 2.433646 TTATGTGTTTGGGCCGGGCT 62.434 55.000 28.80 7.74 0.00 5.19
498 499 1.536943 TTTATGTGTTTGGGCCGGGC 61.537 55.000 22.00 22.00 0.00 6.13
499 500 0.969894 TTTTATGTGTTTGGGCCGGG 59.030 50.000 2.18 0.00 0.00 5.73
500 501 1.671556 GCTTTTATGTGTTTGGGCCGG 60.672 52.381 0.00 0.00 0.00 6.13
501 502 1.671556 GGCTTTTATGTGTTTGGGCCG 60.672 52.381 0.00 0.00 0.00 6.13
502 503 1.623311 AGGCTTTTATGTGTTTGGGCC 59.377 47.619 0.00 0.00 38.71 5.80
503 504 2.687370 CAGGCTTTTATGTGTTTGGGC 58.313 47.619 0.00 0.00 0.00 5.36
504 505 2.612721 GGCAGGCTTTTATGTGTTTGGG 60.613 50.000 0.00 0.00 0.00 4.12
505 506 2.687370 GGCAGGCTTTTATGTGTTTGG 58.313 47.619 0.00 0.00 0.00 3.28
506 507 2.327568 CGGCAGGCTTTTATGTGTTTG 58.672 47.619 0.00 0.00 0.00 2.93
507 508 1.272212 CCGGCAGGCTTTTATGTGTTT 59.728 47.619 0.00 0.00 0.00 2.83
508 509 0.887933 CCGGCAGGCTTTTATGTGTT 59.112 50.000 0.00 0.00 0.00 3.32
509 510 0.965363 CCCGGCAGGCTTTTATGTGT 60.965 55.000 0.00 0.00 35.76 3.72
510 511 1.809207 CCCGGCAGGCTTTTATGTG 59.191 57.895 0.00 0.00 35.76 3.21
511 512 4.337013 CCCGGCAGGCTTTTATGT 57.663 55.556 0.00 0.00 35.76 2.29
520 521 4.506255 CTAAAGGGGCCCGGCAGG 62.506 72.222 18.95 3.98 39.47 4.85
521 522 4.506255 CCTAAAGGGGCCCGGCAG 62.506 72.222 18.95 14.76 0.00 4.85
523 524 2.583298 ATTTCCTAAAGGGGCCCGGC 62.583 60.000 18.95 1.91 35.41 6.13
524 525 0.467474 GATTTCCTAAAGGGGCCCGG 60.467 60.000 18.95 12.85 35.41 5.73
525 526 0.818040 CGATTTCCTAAAGGGGCCCG 60.818 60.000 18.95 1.73 35.41 6.13
526 527 1.107538 GCGATTTCCTAAAGGGGCCC 61.108 60.000 17.12 17.12 35.41 5.80
527 528 0.395173 TGCGATTTCCTAAAGGGGCC 60.395 55.000 0.00 0.00 35.41 5.80
528 529 1.470051 TTGCGATTTCCTAAAGGGGC 58.530 50.000 0.00 0.00 35.41 5.80
529 530 4.242475 GTTTTTGCGATTTCCTAAAGGGG 58.758 43.478 0.00 0.00 35.41 4.79
530 531 3.917985 CGTTTTTGCGATTTCCTAAAGGG 59.082 43.478 0.00 0.00 35.41 3.95
531 532 4.615541 GTCGTTTTTGCGATTTCCTAAAGG 59.384 41.667 0.00 0.00 43.07 3.11
532 533 4.317291 CGTCGTTTTTGCGATTTCCTAAAG 59.683 41.667 0.00 0.00 43.07 1.85
533 534 4.212911 CGTCGTTTTTGCGATTTCCTAAA 58.787 39.130 0.00 0.00 43.07 1.85
534 535 3.364167 CCGTCGTTTTTGCGATTTCCTAA 60.364 43.478 0.00 0.00 43.07 2.69
535 536 2.158058 CCGTCGTTTTTGCGATTTCCTA 59.842 45.455 0.00 0.00 43.07 2.94
536 537 1.069500 CCGTCGTTTTTGCGATTTCCT 60.069 47.619 0.00 0.00 43.07 3.36
537 538 1.323791 CCGTCGTTTTTGCGATTTCC 58.676 50.000 0.00 0.00 43.07 3.13
538 539 1.323791 CCCGTCGTTTTTGCGATTTC 58.676 50.000 0.00 0.00 43.07 2.17
539 540 0.662077 GCCCGTCGTTTTTGCGATTT 60.662 50.000 0.00 0.00 43.07 2.17
540 541 1.081708 GCCCGTCGTTTTTGCGATT 60.082 52.632 0.00 0.00 43.07 3.34
541 542 2.559330 GCCCGTCGTTTTTGCGAT 59.441 55.556 0.00 0.00 43.07 4.58
542 543 3.652000 GGCCCGTCGTTTTTGCGA 61.652 61.111 0.00 0.00 38.68 5.10
543 544 4.693525 GGGCCCGTCGTTTTTGCG 62.694 66.667 5.69 0.00 0.00 4.85
544 545 3.551887 CTGGGCCCGTCGTTTTTGC 62.552 63.158 19.37 0.00 0.00 3.68
545 546 2.642700 CTGGGCCCGTCGTTTTTG 59.357 61.111 19.37 0.00 0.00 2.44
546 547 2.596338 CCTGGGCCCGTCGTTTTT 60.596 61.111 19.37 0.00 0.00 1.94
575 576 1.943340 GCCTAGATTTTGAGCCCGAAG 59.057 52.381 0.00 0.00 0.00 3.79
576 577 1.408266 GGCCTAGATTTTGAGCCCGAA 60.408 52.381 0.00 0.00 37.66 4.30
577 578 0.180406 GGCCTAGATTTTGAGCCCGA 59.820 55.000 0.00 0.00 37.66 5.14
578 579 2.707902 GGCCTAGATTTTGAGCCCG 58.292 57.895 0.00 0.00 37.66 6.13
580 581 0.819666 CCGGGCCTAGATTTTGAGCC 60.820 60.000 0.84 0.00 43.09 4.70
581 582 0.819666 CCCGGGCCTAGATTTTGAGC 60.820 60.000 8.08 0.00 0.00 4.26
582 583 0.819666 GCCCGGGCCTAGATTTTGAG 60.820 60.000 36.64 0.00 34.56 3.02
583 584 1.226262 GCCCGGGCCTAGATTTTGA 59.774 57.895 36.64 0.00 34.56 2.69
584 585 3.841870 GCCCGGGCCTAGATTTTG 58.158 61.111 36.64 0.00 34.56 2.44
602 603 4.124943 ATGCTGCTCCTGGGCCAG 62.125 66.667 27.04 27.04 0.00 4.85
603 604 4.119363 GATGCTGCTCCTGGGCCA 62.119 66.667 5.85 5.85 0.00 5.36
606 607 4.559063 CCCGATGCTGCTCCTGGG 62.559 72.222 0.00 3.32 0.00 4.45
628 629 3.744719 GAAAAAGCCCGACCCCGC 61.745 66.667 0.00 0.00 0.00 6.13
629 630 3.428282 CGAAAAAGCCCGACCCCG 61.428 66.667 0.00 0.00 0.00 5.73
630 631 3.060000 CCGAAAAAGCCCGACCCC 61.060 66.667 0.00 0.00 0.00 4.95
631 632 2.032987 TCCGAAAAAGCCCGACCC 59.967 61.111 0.00 0.00 0.00 4.46
632 633 2.330372 GGTCCGAAAAAGCCCGACC 61.330 63.158 0.00 0.00 0.00 4.79
633 634 2.674084 CGGTCCGAAAAAGCCCGAC 61.674 63.158 4.91 0.00 41.08 4.79
634 635 2.357760 CGGTCCGAAAAAGCCCGA 60.358 61.111 4.91 0.00 41.08 5.14
635 636 3.428282 CCGGTCCGAAAAAGCCCG 61.428 66.667 14.39 0.00 38.39 6.13
636 637 3.060000 CCCGGTCCGAAAAAGCCC 61.060 66.667 14.39 0.00 0.00 5.19
637 638 3.744719 GCCCGGTCCGAAAAAGCC 61.745 66.667 14.39 0.00 0.00 4.35
638 639 2.671963 AGCCCGGTCCGAAAAAGC 60.672 61.111 14.39 7.44 0.00 3.51
639 640 2.978018 GCAGCCCGGTCCGAAAAAG 61.978 63.158 14.39 0.00 0.00 2.27
640 641 2.981350 GCAGCCCGGTCCGAAAAA 60.981 61.111 14.39 0.00 0.00 1.94
664 665 2.267961 GGTTGCGGGTAGTCCTGG 59.732 66.667 0.00 0.00 40.31 4.45
679 680 0.825840 GAGAGGAGCAGCGATAGGGT 60.826 60.000 0.00 0.00 0.00 4.34
758 759 3.478274 GCAGCAGAGAGGGAGGGG 61.478 72.222 0.00 0.00 0.00 4.79
778 779 4.860881 CTAGGGAGAGGGCCGGCA 62.861 72.222 30.85 2.33 0.00 5.69
820 821 1.152567 AGATGGAGCGAGGGAGAGG 60.153 63.158 0.00 0.00 0.00 3.69
821 822 1.178534 GGAGATGGAGCGAGGGAGAG 61.179 65.000 0.00 0.00 0.00 3.20
822 823 1.152652 GGAGATGGAGCGAGGGAGA 60.153 63.158 0.00 0.00 0.00 3.71
823 824 2.206536 GGGAGATGGAGCGAGGGAG 61.207 68.421 0.00 0.00 0.00 4.30
824 825 2.123251 GGGAGATGGAGCGAGGGA 60.123 66.667 0.00 0.00 0.00 4.20
825 826 2.123077 AGGGAGATGGAGCGAGGG 60.123 66.667 0.00 0.00 0.00 4.30
826 827 2.560119 CGAGGGAGATGGAGCGAGG 61.560 68.421 0.00 0.00 0.00 4.63
827 828 3.038280 CGAGGGAGATGGAGCGAG 58.962 66.667 0.00 0.00 0.00 5.03
828 829 3.219928 GCGAGGGAGATGGAGCGA 61.220 66.667 0.00 0.00 0.00 4.93
829 830 4.292178 GGCGAGGGAGATGGAGCG 62.292 72.222 0.00 0.00 0.00 5.03
830 831 3.934962 GGGCGAGGGAGATGGAGC 61.935 72.222 0.00 0.00 0.00 4.70
831 832 3.237741 GGGGCGAGGGAGATGGAG 61.238 72.222 0.00 0.00 0.00 3.86
832 833 3.410788 ATGGGGCGAGGGAGATGGA 62.411 63.158 0.00 0.00 0.00 3.41
833 834 2.851102 ATGGGGCGAGGGAGATGG 60.851 66.667 0.00 0.00 0.00 3.51
834 835 1.825281 GAGATGGGGCGAGGGAGATG 61.825 65.000 0.00 0.00 0.00 2.90
835 836 1.535202 GAGATGGGGCGAGGGAGAT 60.535 63.158 0.00 0.00 0.00 2.75
836 837 2.123251 GAGATGGGGCGAGGGAGA 60.123 66.667 0.00 0.00 0.00 3.71
837 838 3.237741 GGAGATGGGGCGAGGGAG 61.238 72.222 0.00 0.00 0.00 4.30
838 839 3.767268 AGGAGATGGGGCGAGGGA 61.767 66.667 0.00 0.00 0.00 4.20
839 840 3.554342 CAGGAGATGGGGCGAGGG 61.554 72.222 0.00 0.00 0.00 4.30
840 841 4.247380 GCAGGAGATGGGGCGAGG 62.247 72.222 0.00 0.00 0.00 4.63
841 842 3.473647 TGCAGGAGATGGGGCGAG 61.474 66.667 0.00 0.00 0.00 5.03
842 843 3.785859 GTGCAGGAGATGGGGCGA 61.786 66.667 0.00 0.00 0.00 5.54
843 844 4.100084 TGTGCAGGAGATGGGGCG 62.100 66.667 0.00 0.00 0.00 6.13
844 845 2.124403 CTGTGCAGGAGATGGGGC 60.124 66.667 0.00 0.00 0.00 5.80
845 846 2.124403 GCTGTGCAGGAGATGGGG 60.124 66.667 1.11 0.00 0.00 4.96
846 847 1.451567 CAGCTGTGCAGGAGATGGG 60.452 63.158 5.25 0.00 0.00 4.00
847 848 0.743701 GACAGCTGTGCAGGAGATGG 60.744 60.000 27.27 0.00 30.88 3.51
848 849 0.743701 GGACAGCTGTGCAGGAGATG 60.744 60.000 30.84 8.94 36.33 2.90
849 850 1.601171 GGACAGCTGTGCAGGAGAT 59.399 57.895 30.84 0.00 36.33 2.75
850 851 2.587247 GGGACAGCTGTGCAGGAGA 61.587 63.158 34.97 0.00 38.19 3.71
851 852 2.046507 GGGACAGCTGTGCAGGAG 60.047 66.667 34.97 0.91 38.19 3.69
852 853 2.527624 AGGGACAGCTGTGCAGGA 60.528 61.111 34.97 0.00 38.19 3.86
853 854 2.046507 GAGGGACAGCTGTGCAGG 60.047 66.667 34.97 2.52 38.19 4.85
854 855 1.079266 GAGAGGGACAGCTGTGCAG 60.079 63.158 34.97 3.33 38.19 4.41
855 856 2.587247 GGAGAGGGACAGCTGTGCA 61.587 63.158 34.97 0.00 38.19 4.57
856 857 2.267324 GGAGAGGGACAGCTGTGC 59.733 66.667 28.46 28.46 35.50 4.57
857 858 1.611851 AGGGAGAGGGACAGCTGTG 60.612 63.158 27.27 0.00 0.00 3.66
858 859 1.305718 GAGGGAGAGGGACAGCTGT 60.306 63.158 21.88 21.88 0.00 4.40
859 860 2.422231 CGAGGGAGAGGGACAGCTG 61.422 68.421 13.48 13.48 0.00 4.24
860 861 2.043450 CGAGGGAGAGGGACAGCT 60.043 66.667 0.00 0.00 0.00 4.24
861 862 3.844090 GCGAGGGAGAGGGACAGC 61.844 72.222 0.00 0.00 0.00 4.40
862 863 2.043450 AGCGAGGGAGAGGGACAG 60.043 66.667 0.00 0.00 0.00 3.51
863 864 2.043852 GAGCGAGGGAGAGGGACA 60.044 66.667 0.00 0.00 0.00 4.02
864 865 2.835895 GGAGCGAGGGAGAGGGAC 60.836 72.222 0.00 0.00 0.00 4.46
865 866 3.347590 TGGAGCGAGGGAGAGGGA 61.348 66.667 0.00 0.00 0.00 4.20
866 867 3.151022 GTGGAGCGAGGGAGAGGG 61.151 72.222 0.00 0.00 0.00 4.30
1094 1111 2.139382 GAGGGGAAGAAGATGGGGATT 58.861 52.381 0.00 0.00 0.00 3.01
1115 1132 2.443255 GAGCAGGGGATTGGGAGATTTA 59.557 50.000 0.00 0.00 0.00 1.40
1232 1269 1.486310 CGTCAGGGGATTCATCTTCCA 59.514 52.381 0.00 0.00 34.77 3.53
1840 1890 1.305219 GGAAAGCATAGCACACGCCA 61.305 55.000 0.00 0.00 39.83 5.69
2170 2500 2.363306 TGAGGCAGGTTGTGAATTGT 57.637 45.000 0.00 0.00 0.00 2.71
2693 3908 5.122519 TGTGACTTGTTATTTGTCTGCTCA 58.877 37.500 0.00 0.00 0.00 4.26
2702 3917 8.149973 AGTTGTACGATTGTGACTTGTTATTT 57.850 30.769 0.00 0.00 0.00 1.40
2727 3942 4.647611 ACCGTCCTTGATTTGTGACATAA 58.352 39.130 0.00 0.00 0.00 1.90
2912 4128 9.965902 AGTCCTATCAAGTTCATAAAGACATTT 57.034 29.630 0.00 0.00 0.00 2.32
2940 4156 7.938490 TCACATGGACAATGCTTATGTGTATAT 59.062 33.333 17.54 0.00 45.31 0.86
3057 4284 6.310711 GGACACCTAAACTTCTGAAGATAACG 59.689 42.308 23.36 9.94 0.00 3.18
3133 4360 5.680619 TCCAAAAGAAGCTGTGAGAAACTA 58.319 37.500 0.00 0.00 0.00 2.24
3164 4391 3.754188 ATAGTGTACGTCTGAACCGTC 57.246 47.619 0.00 0.00 39.60 4.79
3465 4704 5.415701 AGCTATGTGATTCGAACCATGTTTT 59.584 36.000 0.00 0.00 0.00 2.43
3466 4705 4.943705 AGCTATGTGATTCGAACCATGTTT 59.056 37.500 0.00 0.00 0.00 2.83
3531 4772 5.534278 TCCTTGATAACTGTTGCATGTTGAA 59.466 36.000 2.69 1.87 0.00 2.69
3547 4788 3.998913 TGTTCCTGCATGTCCTTGATA 57.001 42.857 0.00 0.00 0.00 2.15
3557 4798 4.826733 TGACTGTTACATTTGTTCCTGCAT 59.173 37.500 0.00 0.00 0.00 3.96
3574 4815 9.220767 GAATTTAAGAAGGTTACTGATGACTGT 57.779 33.333 0.00 0.00 0.00 3.55
3578 4819 9.449719 GGAAGAATTTAAGAAGGTTACTGATGA 57.550 33.333 0.00 0.00 0.00 2.92
3579 4820 9.231297 TGGAAGAATTTAAGAAGGTTACTGATG 57.769 33.333 0.00 0.00 0.00 3.07
3747 5694 2.426522 GAAAGCATAGCAGACACCACA 58.573 47.619 0.00 0.00 0.00 4.17
3892 5846 6.435277 AGTTACCTGCTCATCATGTGAAAATT 59.565 34.615 0.00 0.00 36.14 1.82
4534 6868 6.099159 AGCGACCCTTATCTCTAATTAACC 57.901 41.667 0.00 0.00 0.00 2.85
4639 6973 6.782082 AGGGATTTCCTTCTTAATTCTTGC 57.218 37.500 0.00 0.00 45.47 4.01
4708 7043 3.781770 CTGCTAGAAGGAGGGCGCG 62.782 68.421 0.00 0.00 29.18 6.86
4714 7049 0.676184 TATGGCGCTGCTAGAAGGAG 59.324 55.000 7.64 0.00 36.68 3.69
4771 7106 4.629523 GGGTTGGACGGCGGTGAA 62.630 66.667 13.24 0.00 0.00 3.18
4781 7116 1.117142 AACGGAAGAGACGGGTTGGA 61.117 55.000 0.00 0.00 35.23 3.53
4856 7191 2.221299 TTAGGTCCCGCAGCACCTT 61.221 57.895 8.17 0.00 40.35 3.50
4857 7192 2.606519 TTAGGTCCCGCAGCACCT 60.607 61.111 7.97 7.97 45.50 4.00
6005 8358 1.341285 CCCAAGATCCCTGATGCAACA 60.341 52.381 0.00 0.00 0.00 3.33
6007 8360 0.396139 GCCCAAGATCCCTGATGCAA 60.396 55.000 0.00 0.00 0.00 4.08
6011 8364 0.178970 GCATGCCCAAGATCCCTGAT 60.179 55.000 6.36 0.00 0.00 2.90
6014 8367 1.229359 CAGCATGCCCAAGATCCCT 59.771 57.895 15.66 0.00 0.00 4.20
6115 8473 0.951040 CCGCACAGGAAAGAGTGGAC 60.951 60.000 0.00 0.00 45.00 4.02
6125 8483 4.314440 GGTCTGCACCGCACAGGA 62.314 66.667 0.00 0.00 45.00 3.86
6244 8602 4.142249 GGACGATTTATTTTGGACCCCTTG 60.142 45.833 0.00 0.00 0.00 3.61
6649 11871 2.725312 CGCTGCTAGAAGGAGGGCA 61.725 63.158 0.00 0.00 39.48 5.36
6705 11927 3.312421 ACTGGAACGACTGAACAACATTG 59.688 43.478 0.00 0.00 0.00 2.82
6862 12091 5.368523 TCTTCTTTAGTCCTGTCAGGGAAAA 59.631 40.000 19.11 14.39 37.10 2.29
7199 12429 1.486211 GTCTCTCGGGGGATTTCTCA 58.514 55.000 0.00 0.00 0.00 3.27
7334 12566 3.500680 GCAATTTCCTGTACCGTTCTTCA 59.499 43.478 0.00 0.00 0.00 3.02
7370 12602 4.306471 CGCGTGCGCTGAAAACCA 62.306 61.111 9.73 0.00 39.32 3.67
7424 12657 3.545703 AGGACTGAACACCAAAGAACAG 58.454 45.455 0.00 0.00 0.00 3.16
7428 12661 3.287222 CCAAAGGACTGAACACCAAAGA 58.713 45.455 0.00 0.00 0.00 2.52
7430 12663 2.757868 CACCAAAGGACTGAACACCAAA 59.242 45.455 0.00 0.00 0.00 3.28
7431 12664 2.291282 ACACCAAAGGACTGAACACCAA 60.291 45.455 0.00 0.00 0.00 3.67
7432 12665 1.283613 ACACCAAAGGACTGAACACCA 59.716 47.619 0.00 0.00 0.00 4.17
7434 12667 3.769536 CAAACACCAAAGGACTGAACAC 58.230 45.455 0.00 0.00 0.00 3.32
7814 13086 1.838396 TGCTCTGGCCACTGTCTGA 60.838 57.895 0.00 0.00 37.74 3.27
7872 13144 2.033448 GAATGGGCGTGGTGGACA 59.967 61.111 0.00 0.00 0.00 4.02
7882 13154 0.469892 ATTTCGGATGGGGAATGGGC 60.470 55.000 0.00 0.00 0.00 5.36
7921 13195 4.169461 AGATGGAGTTGGGAATGGATCAAT 59.831 41.667 0.00 0.00 0.00 2.57
7946 13220 1.667830 GAGTACAACGCAGCTGCCA 60.668 57.895 32.07 10.12 37.91 4.92
8100 13382 1.996292 TTGGCGTCTCGAAAGATCAG 58.004 50.000 0.00 0.00 40.84 2.90
8137 13419 2.490991 GAGTGGCTCAACCTAAACGTT 58.509 47.619 0.00 0.00 40.22 3.99
8143 13425 2.978824 GGCGAGTGGCTCAACCTA 59.021 61.111 0.00 0.00 42.94 3.08
8214 13497 5.063180 TCAGCAATTGCCAATAGTTCAAG 57.937 39.130 26.45 3.13 43.38 3.02
8249 13532 4.693283 CCTCGGATGCAGTATAAAACAGA 58.307 43.478 0.00 0.00 0.00 3.41
8391 13674 3.181451 TGCTTCCTGAACTGAAGATGTGT 60.181 43.478 4.30 0.00 41.38 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.