Multiple sequence alignment - TraesCS2D01G141900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G141900 | chr2D | 100.000 | 6551 | 0 | 0 | 1 | 6551 | 83544348 | 83537798 | 0.000000e+00 | 12098.0 |
1 | TraesCS2D01G141900 | chr2D | 96.269 | 134 | 5 | 0 | 4629 | 4762 | 399721330 | 399721463 | 3.080000e-53 | 220.0 |
2 | TraesCS2D01G141900 | chr2D | 95.620 | 137 | 6 | 0 | 4625 | 4761 | 502931425 | 502931289 | 3.080000e-53 | 220.0 |
3 | TraesCS2D01G141900 | chr2D | 96.947 | 131 | 4 | 0 | 4631 | 4761 | 536091023 | 536091153 | 3.080000e-53 | 220.0 |
4 | TraesCS2D01G141900 | chr2D | 95.370 | 108 | 4 | 1 | 6445 | 6551 | 607527064 | 607527171 | 3.140000e-38 | 171.0 |
5 | TraesCS2D01G141900 | chr2D | 88.889 | 90 | 8 | 2 | 629 | 717 | 382456027 | 382455939 | 6.940000e-20 | 110.0 |
6 | TraesCS2D01G141900 | chr2B | 95.405 | 4679 | 144 | 32 | 1 | 4636 | 135526266 | 135521616 | 0.000000e+00 | 7384.0 |
7 | TraesCS2D01G141900 | chr2B | 95.484 | 1085 | 42 | 5 | 4758 | 5841 | 135521619 | 135520541 | 0.000000e+00 | 1725.0 |
8 | TraesCS2D01G141900 | chr2B | 84.561 | 421 | 36 | 18 | 5831 | 6229 | 135520499 | 135520086 | 2.210000e-104 | 390.0 |
9 | TraesCS2D01G141900 | chr2B | 95.327 | 107 | 5 | 0 | 6445 | 6551 | 297354226 | 297354120 | 3.140000e-38 | 171.0 |
10 | TraesCS2D01G141900 | chr2B | 82.468 | 154 | 12 | 6 | 6300 | 6449 | 135520082 | 135519940 | 3.210000e-23 | 121.0 |
11 | TraesCS2D01G141900 | chr2A | 95.507 | 1736 | 55 | 12 | 127 | 1849 | 84241316 | 84239591 | 0.000000e+00 | 2752.0 |
12 | TraesCS2D01G141900 | chr2A | 94.188 | 1428 | 30 | 17 | 3231 | 4636 | 84237848 | 84236452 | 0.000000e+00 | 2128.0 |
13 | TraesCS2D01G141900 | chr2A | 96.760 | 1111 | 35 | 1 | 1847 | 2957 | 84239511 | 84238402 | 0.000000e+00 | 1851.0 |
14 | TraesCS2D01G141900 | chr2A | 96.529 | 605 | 20 | 1 | 4758 | 5362 | 84236455 | 84235852 | 0.000000e+00 | 1000.0 |
15 | TraesCS2D01G141900 | chr2A | 93.643 | 409 | 24 | 2 | 5433 | 5841 | 84235854 | 84235448 | 1.560000e-170 | 610.0 |
16 | TraesCS2D01G141900 | chr2A | 82.743 | 649 | 64 | 26 | 5831 | 6449 | 84235406 | 84234776 | 9.670000e-148 | 534.0 |
17 | TraesCS2D01G141900 | chr2A | 93.966 | 116 | 5 | 2 | 3003 | 3118 | 84237971 | 84237858 | 2.430000e-39 | 174.0 |
18 | TraesCS2D01G141900 | chr2A | 100.000 | 29 | 0 | 0 | 1 | 29 | 84241344 | 84241316 | 3.000000e-03 | 54.7 |
19 | TraesCS2D01G141900 | chr5D | 82.650 | 1049 | 121 | 32 | 1562 | 2586 | 559621036 | 559622047 | 0.000000e+00 | 872.0 |
20 | TraesCS2D01G141900 | chr5D | 82.786 | 639 | 86 | 12 | 4820 | 5448 | 559625931 | 559626555 | 3.450000e-152 | 549.0 |
21 | TraesCS2D01G141900 | chr5D | 83.793 | 580 | 73 | 12 | 3079 | 3644 | 559624183 | 559624755 | 1.250000e-146 | 531.0 |
22 | TraesCS2D01G141900 | chr5D | 97.692 | 130 | 3 | 0 | 4632 | 4761 | 393056404 | 393056275 | 2.380000e-54 | 224.0 |
23 | TraesCS2D01G141900 | chr5D | 87.845 | 181 | 19 | 3 | 3810 | 3989 | 559624886 | 559625064 | 6.660000e-50 | 209.0 |
24 | TraesCS2D01G141900 | chr5D | 95.327 | 107 | 5 | 0 | 6445 | 6551 | 60322041 | 60321935 | 3.140000e-38 | 171.0 |
25 | TraesCS2D01G141900 | chr5D | 81.481 | 135 | 14 | 10 | 619 | 748 | 421993590 | 421993718 | 4.180000e-17 | 100.0 |
26 | TraesCS2D01G141900 | chr5D | 91.176 | 68 | 6 | 0 | 2653 | 2720 | 559623381 | 559623448 | 6.990000e-15 | 93.5 |
27 | TraesCS2D01G141900 | chr5B | 82.969 | 640 | 93 | 12 | 4817 | 5448 | 693907280 | 693907911 | 1.230000e-156 | 564.0 |
28 | TraesCS2D01G141900 | chr5B | 82.633 | 547 | 73 | 11 | 3113 | 3644 | 693895630 | 693896169 | 1.290000e-126 | 464.0 |
29 | TraesCS2D01G141900 | chr5B | 82.332 | 549 | 73 | 12 | 3113 | 3644 | 693884347 | 693884888 | 7.740000e-124 | 455.0 |
30 | TraesCS2D01G141900 | chr5B | 88.259 | 247 | 19 | 7 | 2760 | 2999 | 693883554 | 693883797 | 2.990000e-73 | 287.0 |
31 | TraesCS2D01G141900 | chr5B | 88.259 | 247 | 19 | 7 | 2760 | 2999 | 693894837 | 693895080 | 2.990000e-73 | 287.0 |
32 | TraesCS2D01G141900 | chr5B | 84.772 | 197 | 26 | 4 | 2525 | 2720 | 693883371 | 693883564 | 1.860000e-45 | 195.0 |
33 | TraesCS2D01G141900 | chr5B | 84.772 | 197 | 26 | 4 | 2525 | 2720 | 693894654 | 693894847 | 1.860000e-45 | 195.0 |
34 | TraesCS2D01G141900 | chr5B | 91.367 | 139 | 8 | 4 | 30 | 166 | 693894098 | 693894234 | 3.120000e-43 | 187.0 |
35 | TraesCS2D01G141900 | chr5B | 90.647 | 139 | 9 | 4 | 30 | 166 | 693882809 | 693882945 | 1.450000e-41 | 182.0 |
36 | TraesCS2D01G141900 | chrUn | 82.633 | 547 | 73 | 11 | 3113 | 3644 | 357194212 | 357193673 | 1.290000e-126 | 464.0 |
37 | TraesCS2D01G141900 | chrUn | 88.259 | 247 | 19 | 7 | 2760 | 2999 | 357195005 | 357194762 | 2.990000e-73 | 287.0 |
38 | TraesCS2D01G141900 | chrUn | 84.772 | 197 | 26 | 4 | 2525 | 2720 | 357195188 | 357194995 | 1.860000e-45 | 195.0 |
39 | TraesCS2D01G141900 | chr3D | 94.964 | 139 | 5 | 2 | 4624 | 4761 | 496172893 | 496172756 | 3.980000e-52 | 217.0 |
40 | TraesCS2D01G141900 | chr3B | 94.326 | 141 | 6 | 2 | 4623 | 4761 | 655858571 | 655858711 | 1.430000e-51 | 215.0 |
41 | TraesCS2D01G141900 | chr7D | 93.750 | 144 | 6 | 2 | 4632 | 4773 | 463266530 | 463266672 | 5.150000e-51 | 213.0 |
42 | TraesCS2D01G141900 | chr7D | 90.110 | 91 | 5 | 4 | 628 | 716 | 1743875 | 1743963 | 1.490000e-21 | 115.0 |
43 | TraesCS2D01G141900 | chr7D | 88.889 | 90 | 6 | 4 | 629 | 716 | 474349149 | 474349062 | 2.500000e-19 | 108.0 |
44 | TraesCS2D01G141900 | chr3A | 93.706 | 143 | 8 | 1 | 4620 | 4761 | 348834588 | 348834446 | 5.150000e-51 | 213.0 |
45 | TraesCS2D01G141900 | chr4B | 92.517 | 147 | 10 | 1 | 4625 | 4770 | 56414359 | 56414505 | 6.660000e-50 | 209.0 |
46 | TraesCS2D01G141900 | chr4B | 95.327 | 107 | 5 | 0 | 6445 | 6551 | 511028942 | 511028836 | 3.140000e-38 | 171.0 |
47 | TraesCS2D01G141900 | chr6B | 96.190 | 105 | 4 | 0 | 6447 | 6551 | 699425632 | 699425736 | 8.730000e-39 | 172.0 |
48 | TraesCS2D01G141900 | chr6B | 95.327 | 107 | 5 | 0 | 6445 | 6551 | 472455363 | 472455469 | 3.140000e-38 | 171.0 |
49 | TraesCS2D01G141900 | chr1B | 95.370 | 108 | 5 | 0 | 6444 | 6551 | 44171380 | 44171273 | 8.730000e-39 | 172.0 |
50 | TraesCS2D01G141900 | chr6D | 97.959 | 98 | 2 | 0 | 6454 | 6551 | 245042205 | 245042108 | 3.140000e-38 | 171.0 |
51 | TraesCS2D01G141900 | chr5A | 95.327 | 107 | 5 | 0 | 6445 | 6551 | 617788890 | 617788996 | 3.140000e-38 | 171.0 |
52 | TraesCS2D01G141900 | chr6A | 87.234 | 94 | 9 | 3 | 629 | 720 | 55552639 | 55552547 | 3.230000e-18 | 104.0 |
53 | TraesCS2D01G141900 | chr6A | 85.507 | 69 | 9 | 1 | 6270 | 6337 | 595607986 | 595607918 | 3.280000e-08 | 71.3 |
54 | TraesCS2D01G141900 | chr1A | 87.778 | 90 | 9 | 2 | 628 | 716 | 578519954 | 578520042 | 3.230000e-18 | 104.0 |
55 | TraesCS2D01G141900 | chr1D | 86.957 | 92 | 10 | 2 | 631 | 721 | 356862309 | 356862399 | 1.160000e-17 | 102.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G141900 | chr2D | 83537798 | 83544348 | 6550 | True | 12098.000000 | 12098 | 100.000000 | 1 | 6551 | 1 | chr2D.!!$R1 | 6550 |
1 | TraesCS2D01G141900 | chr2B | 135519940 | 135526266 | 6326 | True | 2405.000000 | 7384 | 89.479500 | 1 | 6449 | 4 | chr2B.!!$R2 | 6448 |
2 | TraesCS2D01G141900 | chr2A | 84234776 | 84241344 | 6568 | True | 1137.962500 | 2752 | 94.167000 | 1 | 6449 | 8 | chr2A.!!$R1 | 6448 |
3 | TraesCS2D01G141900 | chr5D | 559621036 | 559626555 | 5519 | False | 450.900000 | 872 | 85.650000 | 1562 | 5448 | 5 | chr5D.!!$F2 | 3886 |
4 | TraesCS2D01G141900 | chr5B | 693907280 | 693907911 | 631 | False | 564.000000 | 564 | 82.969000 | 4817 | 5448 | 1 | chr5B.!!$F1 | 631 |
5 | TraesCS2D01G141900 | chr5B | 693894098 | 693896169 | 2071 | False | 283.250000 | 464 | 86.757750 | 30 | 3644 | 4 | chr5B.!!$F3 | 3614 |
6 | TraesCS2D01G141900 | chr5B | 693882809 | 693884888 | 2079 | False | 279.750000 | 455 | 86.502500 | 30 | 3644 | 4 | chr5B.!!$F2 | 3614 |
7 | TraesCS2D01G141900 | chrUn | 357193673 | 357195188 | 1515 | True | 315.333333 | 464 | 85.221333 | 2525 | 3644 | 3 | chrUn.!!$R1 | 1119 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
842 | 855 | 1.677217 | GCCAGGAGCTGTTTCCTACTG | 60.677 | 57.143 | 0.0 | 0.0 | 45.86 | 2.74 | F |
1341 | 1361 | 3.201353 | TGCCACTAGTAAACACAAGCA | 57.799 | 42.857 | 0.0 | 0.0 | 0.00 | 3.91 | F |
1506 | 1526 | 3.226346 | TGTACACGAGGTATGTTGCTC | 57.774 | 47.619 | 0.0 | 0.0 | 33.76 | 4.26 | F |
2495 | 2655 | 4.041567 | TGGCAGACACTTTCTTCTCCATAA | 59.958 | 41.667 | 0.0 | 0.0 | 28.96 | 1.90 | F |
2727 | 4166 | 5.499313 | TGATTGGATTCTTGCTATGTGACA | 58.501 | 37.500 | 0.0 | 0.0 | 0.00 | 3.58 | F |
4053 | 6100 | 0.037232 | GCCTTCTCCTTACGTGCTGT | 60.037 | 55.000 | 0.0 | 0.0 | 0.00 | 4.40 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2073 | 2198 | 1.003118 | GACATTAGCACCACCTGACCA | 59.997 | 52.381 | 0.0 | 0.00 | 0.00 | 4.02 | R |
3070 | 4938 | 1.548719 | GCCCCAATACCAACTGAAACC | 59.451 | 52.381 | 0.0 | 0.00 | 0.00 | 3.27 | R |
3077 | 5041 | 3.893200 | GGTTATTAGGCCCCAATACCAAC | 59.107 | 47.826 | 0.0 | 1.43 | 0.00 | 3.77 | R |
4053 | 6100 | 0.330941 | TGCACCTCCCACATGCAATA | 59.669 | 50.000 | 0.0 | 0.00 | 45.96 | 1.90 | R |
4264 | 6312 | 1.219522 | GCTTGACGCACAGTTACCGT | 61.220 | 55.000 | 0.0 | 0.00 | 38.92 | 4.83 | R |
6048 | 8402 | 1.139256 | TCTACCGTCCTGTTTGCAACA | 59.861 | 47.619 | 0.0 | 0.00 | 39.52 | 3.33 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
51 | 52 | 4.493220 | GCTTAACTTCATGCTACTTCTGCG | 60.493 | 45.833 | 0.00 | 0.00 | 0.00 | 5.18 |
197 | 199 | 6.918022 | GCTGTTTTGTTCTTTTGCTAGTATGT | 59.082 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
245 | 254 | 5.670149 | TGCAGCACAATTAAAATGTTTGG | 57.330 | 34.783 | 0.00 | 0.00 | 0.00 | 3.28 |
441 | 454 | 7.496920 | TCTTCATCCTTATGCAAGAGTAATGTG | 59.503 | 37.037 | 0.00 | 0.00 | 33.20 | 3.21 |
443 | 456 | 6.539826 | TCATCCTTATGCAAGAGTAATGTGTG | 59.460 | 38.462 | 0.00 | 0.00 | 33.20 | 3.82 |
449 | 462 | 5.611796 | TGCAAGAGTAATGTGTGATGTTC | 57.388 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
511 | 524 | 6.957984 | ATACGTGCTTTCATGCATCTATAG | 57.042 | 37.500 | 0.00 | 0.00 | 45.23 | 1.31 |
555 | 568 | 4.022068 | TGTGTTGATCAATTTCTTCTGGGC | 60.022 | 41.667 | 12.12 | 0.00 | 0.00 | 5.36 |
556 | 569 | 4.219288 | GTGTTGATCAATTTCTTCTGGGCT | 59.781 | 41.667 | 12.12 | 0.00 | 0.00 | 5.19 |
604 | 617 | 8.692710 | CCATAATGATTGATTTCCTATCATGGG | 58.307 | 37.037 | 0.00 | 0.00 | 43.54 | 4.00 |
620 | 633 | 8.103305 | CCTATCATGGGTGCTACTTTTATGTAT | 58.897 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
624 | 637 | 7.717875 | TCATGGGTGCTACTTTTATGTATTACC | 59.282 | 37.037 | 0.00 | 0.00 | 32.39 | 2.85 |
813 | 826 | 8.725148 | ACTTATTTGTGTTTGCAAATTTCAACA | 58.275 | 25.926 | 16.21 | 11.83 | 43.97 | 3.33 |
842 | 855 | 1.677217 | GCCAGGAGCTGTTTCCTACTG | 60.677 | 57.143 | 0.00 | 0.00 | 45.86 | 2.74 |
885 | 898 | 7.872483 | TGGCATAGATATATGGTTATGCATACG | 59.128 | 37.037 | 22.34 | 0.00 | 46.29 | 3.06 |
1082 | 1099 | 9.308318 | GCTTGAGGTTTGTTTACTTTATTTCAA | 57.692 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
1277 | 1297 | 6.071896 | AGTGCTTAAATTTCTTACTGAAGGCC | 60.072 | 38.462 | 0.00 | 0.00 | 35.89 | 5.19 |
1278 | 1298 | 5.772672 | TGCTTAAATTTCTTACTGAAGGCCA | 59.227 | 36.000 | 5.01 | 0.00 | 35.89 | 5.36 |
1341 | 1361 | 3.201353 | TGCCACTAGTAAACACAAGCA | 57.799 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
1412 | 1432 | 3.386726 | TCCTATCCATAGTTTGTCGGTGG | 59.613 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
1484 | 1504 | 4.286032 | CCCACCTAACTTAGCATAGGCATA | 59.714 | 45.833 | 0.67 | 0.00 | 42.05 | 3.14 |
1506 | 1526 | 3.226346 | TGTACACGAGGTATGTTGCTC | 57.774 | 47.619 | 0.00 | 0.00 | 33.76 | 4.26 |
1951 | 2066 | 8.083828 | ACATTGACTGGAGTGAGAATATAAGT | 57.916 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
1973 | 2088 | 4.932200 | GTGATTCACTTCAGGGTAAGAGTG | 59.068 | 45.833 | 9.59 | 0.00 | 0.00 | 3.51 |
2073 | 2198 | 5.606348 | TTTTTCCTGGCATTGTAAGTTGT | 57.394 | 34.783 | 0.00 | 0.00 | 0.00 | 3.32 |
2495 | 2655 | 4.041567 | TGGCAGACACTTTCTTCTCCATAA | 59.958 | 41.667 | 0.00 | 0.00 | 28.96 | 1.90 |
2555 | 2716 | 6.408206 | GGAAATAGTAGTAGACCATGGCAGTT | 60.408 | 42.308 | 13.04 | 0.00 | 0.00 | 3.16 |
2683 | 4122 | 7.770897 | GCCTCCAGTTTCTTCTAGAATTAATCA | 59.229 | 37.037 | 5.44 | 0.00 | 33.67 | 2.57 |
2727 | 4166 | 5.499313 | TGATTGGATTCTTGCTATGTGACA | 58.501 | 37.500 | 0.00 | 0.00 | 0.00 | 3.58 |
2742 | 4181 | 5.900865 | ATGTGACATGAATGTGCACATAA | 57.099 | 34.783 | 31.55 | 22.68 | 45.88 | 1.90 |
3070 | 4938 | 7.162082 | AGGAGACTACATTTCTGGTTGTTAAG | 58.838 | 38.462 | 0.00 | 0.00 | 40.61 | 1.85 |
3077 | 5041 | 6.805713 | ACATTTCTGGTTGTTAAGGTTTCAG | 58.194 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3148 | 5112 | 6.622833 | CATGTATGCAGGATGTTGTATGAA | 57.377 | 37.500 | 0.00 | 0.00 | 39.31 | 2.57 |
3380 | 5359 | 6.538381 | TGAAGTCATCTGCGATTAAAGCAATA | 59.462 | 34.615 | 9.71 | 3.03 | 44.67 | 1.90 |
4053 | 6100 | 0.037232 | GCCTTCTCCTTACGTGCTGT | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4129 | 6176 | 3.259123 | AGAGCCAATAAGCTGTTTTTGGG | 59.741 | 43.478 | 15.15 | 3.18 | 45.15 | 4.12 |
4209 | 6257 | 6.817140 | CCTATTGTTAGAACTACCAGTTGGAC | 59.183 | 42.308 | 4.92 | 0.00 | 38.80 | 4.02 |
4260 | 6308 | 1.055849 | TTGGTTGGCTCACTGCTCTA | 58.944 | 50.000 | 0.00 | 0.00 | 42.39 | 2.43 |
4264 | 6312 | 1.273606 | GTTGGCTCACTGCTCTACTCA | 59.726 | 52.381 | 0.00 | 0.00 | 42.39 | 3.41 |
4533 | 6628 | 4.705991 | ACTAGTAAGCAAGTCCTCAGTACC | 59.294 | 45.833 | 0.00 | 0.00 | 0.00 | 3.34 |
4637 | 6733 | 6.907961 | GGGGGTTAGGAAATAATCAAGTACT | 58.092 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
4638 | 6734 | 6.996879 | GGGGGTTAGGAAATAATCAAGTACTC | 59.003 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
4639 | 6735 | 6.996879 | GGGGTTAGGAAATAATCAAGTACTCC | 59.003 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
4640 | 6736 | 6.996879 | GGGTTAGGAAATAATCAAGTACTCCC | 59.003 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
4641 | 6737 | 7.147355 | GGGTTAGGAAATAATCAAGTACTCCCT | 60.147 | 40.741 | 0.00 | 0.00 | 0.00 | 4.20 |
4642 | 6738 | 7.932491 | GGTTAGGAAATAATCAAGTACTCCCTC | 59.068 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
4643 | 6739 | 6.502074 | AGGAAATAATCAAGTACTCCCTCC | 57.498 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
4644 | 6740 | 5.070580 | AGGAAATAATCAAGTACTCCCTCCG | 59.929 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4645 | 6741 | 5.163332 | GGAAATAATCAAGTACTCCCTCCGT | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4646 | 6742 | 5.532664 | AATAATCAAGTACTCCCTCCGTC | 57.467 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
4647 | 6743 | 1.777941 | ATCAAGTACTCCCTCCGTCC | 58.222 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4648 | 6744 | 0.324091 | TCAAGTACTCCCTCCGTCCC | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
4649 | 6745 | 0.613853 | CAAGTACTCCCTCCGTCCCA | 60.614 | 60.000 | 0.00 | 0.00 | 0.00 | 4.37 |
4650 | 6746 | 0.115745 | AAGTACTCCCTCCGTCCCAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
4651 | 6747 | 0.115745 | AGTACTCCCTCCGTCCCAAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
4652 | 6748 | 0.978907 | GTACTCCCTCCGTCCCAAAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
4653 | 6749 | 1.558294 | GTACTCCCTCCGTCCCAAAAT | 59.442 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
4654 | 6750 | 1.073098 | ACTCCCTCCGTCCCAAAATT | 58.927 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
4655 | 6751 | 1.004394 | ACTCCCTCCGTCCCAAAATTC | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
4656 | 6752 | 1.282157 | CTCCCTCCGTCCCAAAATTCT | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
4657 | 6753 | 1.708551 | TCCCTCCGTCCCAAAATTCTT | 59.291 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
4658 | 6754 | 1.818674 | CCCTCCGTCCCAAAATTCTTG | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
4659 | 6755 | 2.514803 | CCTCCGTCCCAAAATTCTTGT | 58.485 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
4660 | 6756 | 2.488153 | CCTCCGTCCCAAAATTCTTGTC | 59.512 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4661 | 6757 | 3.412386 | CTCCGTCCCAAAATTCTTGTCT | 58.588 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
4662 | 6758 | 3.821033 | CTCCGTCCCAAAATTCTTGTCTT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
4663 | 6759 | 4.975631 | TCCGTCCCAAAATTCTTGTCTTA | 58.024 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
4664 | 6760 | 5.378332 | TCCGTCCCAAAATTCTTGTCTTAA | 58.622 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
4665 | 6761 | 5.828859 | TCCGTCCCAAAATTCTTGTCTTAAA | 59.171 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
4666 | 6762 | 6.492087 | TCCGTCCCAAAATTCTTGTCTTAAAT | 59.508 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
4667 | 6763 | 7.014808 | TCCGTCCCAAAATTCTTGTCTTAAATT | 59.985 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
4668 | 6764 | 7.655732 | CCGTCCCAAAATTCTTGTCTTAAATTT | 59.344 | 33.333 | 0.00 | 0.00 | 34.86 | 1.82 |
4669 | 6765 | 8.487176 | CGTCCCAAAATTCTTGTCTTAAATTTG | 58.513 | 33.333 | 0.00 | 0.00 | 33.95 | 2.32 |
4670 | 6766 | 9.325198 | GTCCCAAAATTCTTGTCTTAAATTTGT | 57.675 | 29.630 | 0.00 | 0.00 | 33.95 | 2.83 |
4671 | 6767 | 9.541143 | TCCCAAAATTCTTGTCTTAAATTTGTC | 57.459 | 29.630 | 0.00 | 0.00 | 33.95 | 3.18 |
4672 | 6768 | 9.546428 | CCCAAAATTCTTGTCTTAAATTTGTCT | 57.454 | 29.630 | 0.00 | 0.00 | 33.95 | 3.41 |
4694 | 6790 | 9.764363 | TGTCTAAATATGGATGTATCAAGTCAC | 57.236 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
4695 | 6791 | 8.916654 | GTCTAAATATGGATGTATCAAGTCACG | 58.083 | 37.037 | 0.00 | 0.00 | 0.00 | 4.35 |
4696 | 6792 | 8.638873 | TCTAAATATGGATGTATCAAGTCACGT | 58.361 | 33.333 | 0.00 | 0.00 | 0.00 | 4.49 |
4697 | 6793 | 9.261180 | CTAAATATGGATGTATCAAGTCACGTT | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 3.99 |
4698 | 6794 | 8.506168 | AAATATGGATGTATCAAGTCACGTTT | 57.494 | 30.769 | 0.00 | 0.00 | 0.00 | 3.60 |
4699 | 6795 | 8.506168 | AATATGGATGTATCAAGTCACGTTTT | 57.494 | 30.769 | 0.00 | 0.00 | 0.00 | 2.43 |
4700 | 6796 | 9.607988 | AATATGGATGTATCAAGTCACGTTTTA | 57.392 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
4701 | 6797 | 6.961359 | TGGATGTATCAAGTCACGTTTTAG | 57.039 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
4702 | 6798 | 6.460781 | TGGATGTATCAAGTCACGTTTTAGT | 58.539 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4703 | 6799 | 7.604549 | TGGATGTATCAAGTCACGTTTTAGTA | 58.395 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
4704 | 6800 | 8.255206 | TGGATGTATCAAGTCACGTTTTAGTAT | 58.745 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
4705 | 6801 | 9.095065 | GGATGTATCAAGTCACGTTTTAGTATT | 57.905 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
4715 | 6811 | 9.962783 | AGTCACGTTTTAGTATTAGATACATCC | 57.037 | 33.333 | 0.00 | 0.00 | 38.21 | 3.51 |
4716 | 6812 | 8.899776 | GTCACGTTTTAGTATTAGATACATCCG | 58.100 | 37.037 | 0.00 | 0.00 | 38.21 | 4.18 |
4717 | 6813 | 8.623903 | TCACGTTTTAGTATTAGATACATCCGT | 58.376 | 33.333 | 0.00 | 0.00 | 38.21 | 4.69 |
4718 | 6814 | 9.882996 | CACGTTTTAGTATTAGATACATCCGTA | 57.117 | 33.333 | 0.00 | 0.00 | 38.21 | 4.02 |
4735 | 6831 | 8.693120 | ACATCCGTATCTAGACAAATCTAAGA | 57.307 | 34.615 | 0.00 | 0.00 | 36.98 | 2.10 |
4736 | 6832 | 8.569641 | ACATCCGTATCTAGACAAATCTAAGAC | 58.430 | 37.037 | 0.00 | 0.00 | 36.98 | 3.01 |
4737 | 6833 | 8.568794 | CATCCGTATCTAGACAAATCTAAGACA | 58.431 | 37.037 | 0.00 | 0.00 | 36.98 | 3.41 |
4738 | 6834 | 8.515695 | TCCGTATCTAGACAAATCTAAGACAA | 57.484 | 34.615 | 0.00 | 0.00 | 36.98 | 3.18 |
4739 | 6835 | 8.622157 | TCCGTATCTAGACAAATCTAAGACAAG | 58.378 | 37.037 | 0.00 | 0.00 | 36.98 | 3.16 |
4740 | 6836 | 8.622157 | CCGTATCTAGACAAATCTAAGACAAGA | 58.378 | 37.037 | 0.00 | 0.00 | 36.98 | 3.02 |
4752 | 6848 | 9.463443 | AAATCTAAGACAAGAATTTTGAAACGG | 57.537 | 29.630 | 7.18 | 0.00 | 0.00 | 4.44 |
4753 | 6849 | 7.795482 | TCTAAGACAAGAATTTTGAAACGGA | 57.205 | 32.000 | 7.18 | 0.00 | 0.00 | 4.69 |
4754 | 6850 | 7.861630 | TCTAAGACAAGAATTTTGAAACGGAG | 58.138 | 34.615 | 7.18 | 0.00 | 0.00 | 4.63 |
4755 | 6851 | 5.438761 | AGACAAGAATTTTGAAACGGAGG | 57.561 | 39.130 | 7.18 | 0.00 | 0.00 | 4.30 |
4756 | 6852 | 4.278419 | AGACAAGAATTTTGAAACGGAGGG | 59.722 | 41.667 | 7.18 | 0.00 | 0.00 | 4.30 |
4757 | 6853 | 4.211920 | ACAAGAATTTTGAAACGGAGGGA | 58.788 | 39.130 | 7.18 | 0.00 | 0.00 | 4.20 |
4758 | 6854 | 4.278419 | ACAAGAATTTTGAAACGGAGGGAG | 59.722 | 41.667 | 7.18 | 0.00 | 0.00 | 4.30 |
4759 | 6855 | 4.100279 | AGAATTTTGAAACGGAGGGAGT | 57.900 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
4760 | 6856 | 5.237236 | AGAATTTTGAAACGGAGGGAGTA | 57.763 | 39.130 | 0.00 | 0.00 | 0.00 | 2.59 |
4771 | 6867 | 7.178983 | TGAAACGGAGGGAGTAGAACTTATTTA | 59.821 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
5170 | 7433 | 1.347707 | TGATGTCACTGAAGGTGGGAC | 59.652 | 52.381 | 0.00 | 0.00 | 45.38 | 4.46 |
5171 | 7434 | 1.347707 | GATGTCACTGAAGGTGGGACA | 59.652 | 52.381 | 1.22 | 1.22 | 45.38 | 4.02 |
5259 | 7523 | 3.197766 | TCATTCATCACCAGGACTACACC | 59.802 | 47.826 | 0.00 | 0.00 | 0.00 | 4.16 |
5270 | 7534 | 4.424430 | CTACACCAACGCGTGCGC | 62.424 | 66.667 | 14.98 | 8.17 | 44.19 | 6.09 |
5378 | 7650 | 3.322369 | CATGCATGTTTGTGTTCAGCAT | 58.678 | 40.909 | 18.91 | 0.00 | 41.42 | 3.79 |
5476 | 7749 | 1.647545 | CCAATGCTGGCGTCGAACAT | 61.648 | 55.000 | 0.00 | 0.00 | 35.39 | 2.71 |
5638 | 7912 | 4.646572 | ACATCCTCTGTTCAAGTCCTTTC | 58.353 | 43.478 | 0.00 | 0.00 | 32.90 | 2.62 |
5643 | 7917 | 6.187682 | TCCTCTGTTCAAGTCCTTTCTTTTT | 58.812 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
5645 | 7919 | 6.095440 | CCTCTGTTCAAGTCCTTTCTTTTTCA | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
5646 | 7920 | 7.362920 | CCTCTGTTCAAGTCCTTTCTTTTTCAA | 60.363 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
5647 | 7921 | 8.066612 | TCTGTTCAAGTCCTTTCTTTTTCAAT | 57.933 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
5653 | 7927 | 8.748412 | TCAAGTCCTTTCTTTTTCAATCAAAGA | 58.252 | 29.630 | 0.00 | 0.00 | 38.27 | 2.52 |
5665 | 7939 | 4.711721 | TCAATCAAAGATTCTTTCGTGCG | 58.288 | 39.130 | 8.71 | 0.00 | 0.00 | 5.34 |
5679 | 7953 | 4.435436 | TGCGCTAGTGTGGAGCCG | 62.435 | 66.667 | 9.73 | 0.00 | 36.53 | 5.52 |
5716 | 7990 | 7.318141 | TGTTCAAGTAATAACTCCCTTAGTCG | 58.682 | 38.462 | 0.00 | 0.00 | 37.50 | 4.18 |
5758 | 8032 | 3.056821 | TCTTTACTGAGACCGGTCATGTG | 60.057 | 47.826 | 35.00 | 22.66 | 33.18 | 3.21 |
5774 | 8048 | 2.093306 | TGTGGGTAGCAATTGACTCG | 57.907 | 50.000 | 10.34 | 0.00 | 0.00 | 4.18 |
5812 | 8086 | 6.128445 | GCTCTTATACGCTATCATTTGCACAT | 60.128 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
5814 | 8088 | 2.480224 | ACGCTATCATTTGCACATGC | 57.520 | 45.000 | 8.01 | 0.00 | 42.50 | 4.06 |
5841 | 8115 | 2.293519 | TGGAGGTATGGATCCTGGTGAA | 60.294 | 50.000 | 14.23 | 0.00 | 36.50 | 3.18 |
5842 | 8116 | 2.777692 | GGAGGTATGGATCCTGGTGAAA | 59.222 | 50.000 | 14.23 | 0.00 | 35.20 | 2.69 |
5844 | 8118 | 3.711704 | GAGGTATGGATCCTGGTGAAAGA | 59.288 | 47.826 | 14.23 | 0.00 | 35.20 | 2.52 |
5845 | 8119 | 4.111577 | AGGTATGGATCCTGGTGAAAGAA | 58.888 | 43.478 | 14.23 | 0.00 | 33.62 | 2.52 |
5846 | 8120 | 4.540099 | AGGTATGGATCCTGGTGAAAGAAA | 59.460 | 41.667 | 14.23 | 0.00 | 33.62 | 2.52 |
5851 | 8125 | 5.994250 | TGGATCCTGGTGAAAGAAATAGAG | 58.006 | 41.667 | 14.23 | 0.00 | 0.00 | 2.43 |
5941 | 8263 | 4.065321 | AGATTTTATCTCCAGTCGGCAG | 57.935 | 45.455 | 0.00 | 0.00 | 33.42 | 4.85 |
5972 | 8297 | 6.373216 | TGTTAGTTGTTACAATATGGGTCTGC | 59.627 | 38.462 | 0.00 | 0.00 | 0.00 | 4.26 |
5973 | 8298 | 4.917385 | AGTTGTTACAATATGGGTCTGCA | 58.083 | 39.130 | 0.00 | 0.00 | 0.00 | 4.41 |
5974 | 8299 | 5.509498 | AGTTGTTACAATATGGGTCTGCAT | 58.491 | 37.500 | 0.00 | 0.00 | 0.00 | 3.96 |
5975 | 8300 | 6.658849 | AGTTGTTACAATATGGGTCTGCATA | 58.341 | 36.000 | 0.00 | 0.00 | 0.00 | 3.14 |
5976 | 8301 | 6.767902 | AGTTGTTACAATATGGGTCTGCATAG | 59.232 | 38.462 | 0.00 | 0.00 | 0.00 | 2.23 |
6001 | 8332 | 5.304614 | AGCTCAGTACTTAACCAAGTCTCAA | 59.695 | 40.000 | 0.00 | 0.00 | 44.04 | 3.02 |
6003 | 8334 | 6.726490 | TCAGTACTTAACCAAGTCTCAACT | 57.274 | 37.500 | 0.00 | 0.00 | 44.04 | 3.16 |
6011 | 8342 | 2.766263 | ACCAAGTCTCAACTGAGTGACA | 59.234 | 45.455 | 6.61 | 0.00 | 42.60 | 3.58 |
6043 | 8397 | 0.971959 | TGCTACGAACGGGGTGGTAT | 60.972 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
6048 | 8402 | 0.177141 | CGAACGGGGTGGTATGACAT | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
6050 | 8404 | 0.988832 | AACGGGGTGGTATGACATGT | 59.011 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
6056 | 8410 | 2.560542 | GGGTGGTATGACATGTTGCAAA | 59.439 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
6143 | 8497 | 0.248215 | GTGCTGCATACAACGATGGC | 60.248 | 55.000 | 5.27 | 0.00 | 0.00 | 4.40 |
6149 | 8503 | 1.333619 | GCATACAACGATGGCGGAATT | 59.666 | 47.619 | 0.00 | 0.00 | 43.17 | 2.17 |
6187 | 8541 | 2.351244 | TGCTTCGAGCGATGAGGGT | 61.351 | 57.895 | 9.56 | 0.00 | 46.26 | 4.34 |
6189 | 8543 | 1.227089 | CTTCGAGCGATGAGGGTGG | 60.227 | 63.158 | 0.04 | 0.00 | 0.00 | 4.61 |
6208 | 8562 | 1.400494 | GGACACAACAACTGGTGACAC | 59.600 | 52.381 | 0.00 | 0.00 | 38.38 | 3.67 |
6237 | 8591 | 3.196207 | AACCAGCACCGGCAGATGT | 62.196 | 57.895 | 0.00 | 0.00 | 44.61 | 3.06 |
6240 | 8594 | 1.968017 | CAGCACCGGCAGATGTTGT | 60.968 | 57.895 | 0.00 | 0.00 | 44.61 | 3.32 |
6246 | 8600 | 1.300971 | CCGGCAGATGTTGTGACTGG | 61.301 | 60.000 | 0.00 | 0.00 | 33.00 | 4.00 |
6248 | 8602 | 1.337728 | CGGCAGATGTTGTGACTGGTA | 60.338 | 52.381 | 0.00 | 0.00 | 33.00 | 3.25 |
6252 | 8606 | 3.433615 | GCAGATGTTGTGACTGGTAAGAC | 59.566 | 47.826 | 0.00 | 0.00 | 33.00 | 3.01 |
6277 | 8631 | 0.536460 | GGTTCAAGCGGTGGGAAGAA | 60.536 | 55.000 | 2.60 | 0.00 | 0.00 | 2.52 |
6289 | 8643 | 0.175989 | GGGAAGAAGTGCTACGAGGG | 59.824 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6291 | 8645 | 0.460459 | GAAGAAGTGCTACGAGGGCC | 60.460 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
6292 | 8646 | 1.192146 | AAGAAGTGCTACGAGGGCCA | 61.192 | 55.000 | 6.18 | 0.00 | 0.00 | 5.36 |
6324 | 8678 | 2.685388 | CTCACTCTAGCACGAATCTCCA | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6325 | 8679 | 3.291584 | TCACTCTAGCACGAATCTCCAT | 58.708 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
6338 | 8692 | 4.497006 | CGAATCTCCATGCAAAGATCCAAC | 60.497 | 45.833 | 9.31 | 3.45 | 31.03 | 3.77 |
6346 | 8700 | 2.811431 | TGCAAAGATCCAACGGTTAGTG | 59.189 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
6377 | 8732 | 2.809696 | TGAGCTTAAGCAAACCCGTTAC | 59.190 | 45.455 | 28.39 | 7.50 | 45.16 | 2.50 |
6396 | 8754 | 8.373220 | CCCGTTACTATATTGTCTTCCCTAAAT | 58.627 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
6397 | 8755 | 9.420551 | CCGTTACTATATTGTCTTCCCTAAATC | 57.579 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
6398 | 8756 | 9.420551 | CGTTACTATATTGTCTTCCCTAAATCC | 57.579 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
6399 | 8757 | 9.722184 | GTTACTATATTGTCTTCCCTAAATCCC | 57.278 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
6400 | 8758 | 9.684702 | TTACTATATTGTCTTCCCTAAATCCCT | 57.315 | 33.333 | 0.00 | 0.00 | 0.00 | 4.20 |
6402 | 8760 | 9.684702 | ACTATATTGTCTTCCCTAAATCCCTAA | 57.315 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
6449 | 8807 | 2.866762 | CAAAATCAGCCGGCTCTAGTAC | 59.133 | 50.000 | 30.29 | 0.00 | 0.00 | 2.73 |
6450 | 8808 | 2.074729 | AATCAGCCGGCTCTAGTACT | 57.925 | 50.000 | 30.29 | 0.00 | 0.00 | 2.73 |
6451 | 8809 | 2.074729 | ATCAGCCGGCTCTAGTACTT | 57.925 | 50.000 | 30.29 | 0.00 | 0.00 | 2.24 |
6452 | 8810 | 1.848652 | TCAGCCGGCTCTAGTACTTT | 58.151 | 50.000 | 30.29 | 0.00 | 0.00 | 2.66 |
6453 | 8811 | 1.749634 | TCAGCCGGCTCTAGTACTTTC | 59.250 | 52.381 | 30.29 | 0.00 | 0.00 | 2.62 |
6454 | 8812 | 1.751924 | CAGCCGGCTCTAGTACTTTCT | 59.248 | 52.381 | 30.29 | 0.00 | 0.00 | 2.52 |
6455 | 8813 | 2.025898 | AGCCGGCTCTAGTACTTTCTC | 58.974 | 52.381 | 27.08 | 0.00 | 0.00 | 2.87 |
6456 | 8814 | 1.067364 | GCCGGCTCTAGTACTTTCTCC | 59.933 | 57.143 | 22.15 | 0.00 | 0.00 | 3.71 |
6457 | 8815 | 2.657143 | CCGGCTCTAGTACTTTCTCCT | 58.343 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
6458 | 8816 | 3.025262 | CCGGCTCTAGTACTTTCTCCTT | 58.975 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6459 | 8817 | 3.447944 | CCGGCTCTAGTACTTTCTCCTTT | 59.552 | 47.826 | 0.00 | 0.00 | 0.00 | 3.11 |
6460 | 8818 | 4.440387 | CCGGCTCTAGTACTTTCTCCTTTC | 60.440 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
6461 | 8819 | 4.440387 | CGGCTCTAGTACTTTCTCCTTTCC | 60.440 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
6462 | 8820 | 4.440387 | GGCTCTAGTACTTTCTCCTTTCCG | 60.440 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6463 | 8821 | 4.440387 | GCTCTAGTACTTTCTCCTTTCCGG | 60.440 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
6464 | 8822 | 4.670765 | TCTAGTACTTTCTCCTTTCCGGT | 58.329 | 43.478 | 0.00 | 0.00 | 0.00 | 5.28 |
6465 | 8823 | 5.082425 | TCTAGTACTTTCTCCTTTCCGGTT | 58.918 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
6466 | 8824 | 4.701651 | AGTACTTTCTCCTTTCCGGTTT | 57.298 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
6467 | 8825 | 5.813513 | AGTACTTTCTCCTTTCCGGTTTA | 57.186 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
6468 | 8826 | 6.370186 | AGTACTTTCTCCTTTCCGGTTTAT | 57.630 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
6469 | 8827 | 7.486407 | AGTACTTTCTCCTTTCCGGTTTATA | 57.514 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
6470 | 8828 | 7.554211 | AGTACTTTCTCCTTTCCGGTTTATAG | 58.446 | 38.462 | 0.00 | 0.00 | 0.00 | 1.31 |
6471 | 8829 | 5.742063 | ACTTTCTCCTTTCCGGTTTATAGG | 58.258 | 41.667 | 0.00 | 2.55 | 0.00 | 2.57 |
6472 | 8830 | 4.765813 | TTCTCCTTTCCGGTTTATAGGG | 57.234 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
6473 | 8831 | 2.436911 | TCTCCTTTCCGGTTTATAGGGC | 59.563 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6474 | 8832 | 2.438392 | CTCCTTTCCGGTTTATAGGGCT | 59.562 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6475 | 8833 | 2.436911 | TCCTTTCCGGTTTATAGGGCTC | 59.563 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
6476 | 8834 | 2.171870 | CCTTTCCGGTTTATAGGGCTCA | 59.828 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
6477 | 8835 | 3.371166 | CCTTTCCGGTTTATAGGGCTCAA | 60.371 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
6478 | 8836 | 4.461198 | CTTTCCGGTTTATAGGGCTCAAT | 58.539 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
6479 | 8837 | 4.513406 | TTCCGGTTTATAGGGCTCAATT | 57.487 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
6480 | 8838 | 4.081322 | TCCGGTTTATAGGGCTCAATTC | 57.919 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
6481 | 8839 | 3.456644 | TCCGGTTTATAGGGCTCAATTCA | 59.543 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
6482 | 8840 | 4.080243 | TCCGGTTTATAGGGCTCAATTCAA | 60.080 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
6483 | 8841 | 4.642885 | CCGGTTTATAGGGCTCAATTCAAA | 59.357 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
6484 | 8842 | 5.126384 | CCGGTTTATAGGGCTCAATTCAAAA | 59.874 | 40.000 | 0.00 | 0.00 | 0.00 | 2.44 |
6485 | 8843 | 6.350612 | CCGGTTTATAGGGCTCAATTCAAAAA | 60.351 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
6486 | 8844 | 7.264947 | CGGTTTATAGGGCTCAATTCAAAAAT | 58.735 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
6487 | 8845 | 7.435192 | CGGTTTATAGGGCTCAATTCAAAAATC | 59.565 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
6488 | 8846 | 8.478066 | GGTTTATAGGGCTCAATTCAAAAATCT | 58.522 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
6489 | 8847 | 9.521503 | GTTTATAGGGCTCAATTCAAAAATCTC | 57.478 | 33.333 | 0.00 | 0.00 | 0.00 | 2.75 |
6490 | 8848 | 8.821686 | TTATAGGGCTCAATTCAAAAATCTCA | 57.178 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
6491 | 8849 | 5.397142 | AGGGCTCAATTCAAAAATCTCAC | 57.603 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
6492 | 8850 | 4.221482 | AGGGCTCAATTCAAAAATCTCACC | 59.779 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
6493 | 8851 | 4.021192 | GGGCTCAATTCAAAAATCTCACCA | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
6494 | 8852 | 5.511202 | GGGCTCAATTCAAAAATCTCACCAA | 60.511 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
6495 | 8853 | 5.406477 | GGCTCAATTCAAAAATCTCACCAAC | 59.594 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
6496 | 8854 | 5.406477 | GCTCAATTCAAAAATCTCACCAACC | 59.594 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
6497 | 8855 | 6.477053 | TCAATTCAAAAATCTCACCAACCA | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
6498 | 8856 | 6.882656 | TCAATTCAAAAATCTCACCAACCAA | 58.117 | 32.000 | 0.00 | 0.00 | 0.00 | 3.67 |
6499 | 8857 | 6.985645 | TCAATTCAAAAATCTCACCAACCAAG | 59.014 | 34.615 | 0.00 | 0.00 | 0.00 | 3.61 |
6500 | 8858 | 6.729690 | ATTCAAAAATCTCACCAACCAAGA | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
6501 | 8859 | 6.729690 | TTCAAAAATCTCACCAACCAAGAT | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
6502 | 8860 | 7.831691 | TTCAAAAATCTCACCAACCAAGATA | 57.168 | 32.000 | 0.00 | 0.00 | 0.00 | 1.98 |
6503 | 8861 | 7.831691 | TCAAAAATCTCACCAACCAAGATAA | 57.168 | 32.000 | 0.00 | 0.00 | 0.00 | 1.75 |
6504 | 8862 | 8.243961 | TCAAAAATCTCACCAACCAAGATAAA | 57.756 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
6505 | 8863 | 8.869109 | TCAAAAATCTCACCAACCAAGATAAAT | 58.131 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
6506 | 8864 | 8.928733 | CAAAAATCTCACCAACCAAGATAAATG | 58.071 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
6507 | 8865 | 6.780457 | AATCTCACCAACCAAGATAAATGG | 57.220 | 37.500 | 0.00 | 0.00 | 43.84 | 3.16 |
6516 | 8874 | 4.970662 | CCAAGATAAATGGTGAGTGGTG | 57.029 | 45.455 | 0.00 | 0.00 | 33.08 | 4.17 |
6517 | 8875 | 3.696051 | CCAAGATAAATGGTGAGTGGTGG | 59.304 | 47.826 | 0.00 | 0.00 | 33.08 | 4.61 |
6518 | 8876 | 4.567537 | CCAAGATAAATGGTGAGTGGTGGA | 60.568 | 45.833 | 0.00 | 0.00 | 33.08 | 4.02 |
6519 | 8877 | 4.927267 | AGATAAATGGTGAGTGGTGGAA | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 3.53 |
6520 | 8878 | 5.456921 | AGATAAATGGTGAGTGGTGGAAT | 57.543 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
6521 | 8879 | 6.575244 | AGATAAATGGTGAGTGGTGGAATA | 57.425 | 37.500 | 0.00 | 0.00 | 0.00 | 1.75 |
6522 | 8880 | 6.357367 | AGATAAATGGTGAGTGGTGGAATAC | 58.643 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
6523 | 8881 | 4.657814 | AAATGGTGAGTGGTGGAATACT | 57.342 | 40.909 | 0.00 | 0.00 | 0.00 | 2.12 |
6524 | 8882 | 4.657814 | AATGGTGAGTGGTGGAATACTT | 57.342 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
6525 | 8883 | 4.657814 | ATGGTGAGTGGTGGAATACTTT | 57.342 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
6526 | 8884 | 4.447138 | TGGTGAGTGGTGGAATACTTTT | 57.553 | 40.909 | 0.00 | 0.00 | 0.00 | 2.27 |
6527 | 8885 | 4.798882 | TGGTGAGTGGTGGAATACTTTTT | 58.201 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
6528 | 8886 | 4.582656 | TGGTGAGTGGTGGAATACTTTTTG | 59.417 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
6529 | 8887 | 4.583073 | GGTGAGTGGTGGAATACTTTTTGT | 59.417 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
6530 | 8888 | 5.766174 | GGTGAGTGGTGGAATACTTTTTGTA | 59.234 | 40.000 | 0.00 | 0.00 | 35.37 | 2.41 |
6531 | 8889 | 6.263617 | GGTGAGTGGTGGAATACTTTTTGTAA | 59.736 | 38.462 | 0.00 | 0.00 | 34.45 | 2.41 |
6532 | 8890 | 7.039993 | GGTGAGTGGTGGAATACTTTTTGTAAT | 60.040 | 37.037 | 0.00 | 0.00 | 34.45 | 1.89 |
6533 | 8891 | 8.357402 | GTGAGTGGTGGAATACTTTTTGTAATT | 58.643 | 33.333 | 0.00 | 0.00 | 34.45 | 1.40 |
6534 | 8892 | 8.919145 | TGAGTGGTGGAATACTTTTTGTAATTT | 58.081 | 29.630 | 0.00 | 0.00 | 34.45 | 1.82 |
6535 | 8893 | 9.191995 | GAGTGGTGGAATACTTTTTGTAATTTG | 57.808 | 33.333 | 0.00 | 0.00 | 34.45 | 2.32 |
6536 | 8894 | 7.655732 | AGTGGTGGAATACTTTTTGTAATTTGC | 59.344 | 33.333 | 0.00 | 0.00 | 34.45 | 3.68 |
6537 | 8895 | 7.439655 | GTGGTGGAATACTTTTTGTAATTTGCA | 59.560 | 33.333 | 0.00 | 0.00 | 34.45 | 4.08 |
6538 | 8896 | 7.987458 | TGGTGGAATACTTTTTGTAATTTGCAA | 59.013 | 29.630 | 0.00 | 0.00 | 34.45 | 4.08 |
6539 | 8897 | 8.831550 | GGTGGAATACTTTTTGTAATTTGCAAA | 58.168 | 29.630 | 15.44 | 15.44 | 34.45 | 3.68 |
6542 | 8900 | 9.381027 | GGAATACTTTTTGTAATTTGCAAAAGC | 57.619 | 29.630 | 17.19 | 9.70 | 43.70 | 3.51 |
6543 | 8901 | 9.928236 | GAATACTTTTTGTAATTTGCAAAAGCA | 57.072 | 25.926 | 17.19 | 12.17 | 43.70 | 3.91 |
6544 | 8902 | 9.715123 | AATACTTTTTGTAATTTGCAAAAGCAC | 57.285 | 25.926 | 17.19 | 13.97 | 43.70 | 4.40 |
6545 | 8903 | 6.550843 | ACTTTTTGTAATTTGCAAAAGCACC | 58.449 | 32.000 | 17.19 | 3.59 | 43.70 | 5.01 |
6546 | 8904 | 5.491635 | TTTTGTAATTTGCAAAAGCACCC | 57.508 | 34.783 | 17.19 | 2.20 | 39.83 | 4.61 |
6547 | 8905 | 3.827008 | TGTAATTTGCAAAAGCACCCA | 57.173 | 38.095 | 17.19 | 4.77 | 0.00 | 4.51 |
6548 | 8906 | 4.142609 | TGTAATTTGCAAAAGCACCCAA | 57.857 | 36.364 | 17.19 | 0.00 | 0.00 | 4.12 |
6549 | 8907 | 4.712476 | TGTAATTTGCAAAAGCACCCAAT | 58.288 | 34.783 | 17.19 | 0.00 | 0.00 | 3.16 |
6550 | 8908 | 5.128919 | TGTAATTTGCAAAAGCACCCAATT | 58.871 | 33.333 | 17.19 | 5.08 | 0.00 | 2.32 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
197 | 199 | 8.862325 | AAGAACAATGATCACACCATAACTTA | 57.138 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
245 | 254 | 2.744741 | GCAGCAGGGAAGAAAGAAGTAC | 59.255 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
352 | 361 | 8.953990 | CAATTTTACGGACTTGAACAAAAGTAG | 58.046 | 33.333 | 0.00 | 0.00 | 40.48 | 2.57 |
441 | 454 | 3.751175 | TGGAGATTCCAAACGAACATCAC | 59.249 | 43.478 | 0.00 | 0.00 | 45.00 | 3.06 |
555 | 568 | 4.084745 | GCAAGTGCACAAAATGACAATGAG | 60.085 | 41.667 | 21.04 | 0.00 | 41.59 | 2.90 |
556 | 569 | 3.803231 | GCAAGTGCACAAAATGACAATGA | 59.197 | 39.130 | 21.04 | 0.00 | 41.59 | 2.57 |
624 | 637 | 6.978674 | TCTTTACAGAGGGAGTACCATATG | 57.021 | 41.667 | 0.00 | 0.00 | 43.54 | 1.78 |
700 | 713 | 4.440808 | TGATTGGTACTCCCTCCCTAAAA | 58.559 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
705 | 718 | 2.408565 | TGATGATTGGTACTCCCTCCC | 58.591 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
813 | 826 | 3.859414 | GCTCCTGGCTCCTGCGAT | 61.859 | 66.667 | 0.00 | 0.00 | 40.82 | 4.58 |
1138 | 1158 | 9.693739 | AAGGAATGTCACATTTTATGTATGGTA | 57.306 | 29.630 | 4.04 | 0.00 | 42.70 | 3.25 |
1277 | 1297 | 1.137404 | GGCATTACGCTTGGCACTG | 59.863 | 57.895 | 0.00 | 0.00 | 41.91 | 3.66 |
1278 | 1298 | 1.002134 | AGGCATTACGCTTGGCACT | 60.002 | 52.632 | 8.69 | 0.00 | 41.77 | 4.40 |
1341 | 1361 | 7.332926 | CAGCTTAAGTCTTGAACAGTGTCATAT | 59.667 | 37.037 | 4.02 | 0.00 | 0.00 | 1.78 |
1412 | 1432 | 4.449743 | TGAGTGCATGGTTTCGTAGTAAAC | 59.550 | 41.667 | 0.00 | 0.00 | 38.39 | 2.01 |
1484 | 1504 | 4.081642 | AGAGCAACATACCTCGTGTACAAT | 60.082 | 41.667 | 0.00 | 0.00 | 33.39 | 2.71 |
1506 | 1526 | 0.536687 | CCCATGGAGCCACATAGCAG | 60.537 | 60.000 | 15.22 | 0.00 | 34.23 | 4.24 |
1534 | 1554 | 5.485353 | TCCCACAAACAGAAGAGACAGATAT | 59.515 | 40.000 | 0.00 | 0.00 | 0.00 | 1.63 |
1568 | 1589 | 3.885358 | TCTCATACGACATGTATCGCAC | 58.115 | 45.455 | 0.00 | 0.00 | 46.22 | 5.34 |
1820 | 1844 | 5.570973 | TGACAACAAAACATCAAACTGAACG | 59.429 | 36.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1951 | 2066 | 4.593206 | ACACTCTTACCCTGAAGTGAATCA | 59.407 | 41.667 | 8.24 | 0.00 | 0.00 | 2.57 |
1973 | 2088 | 2.595463 | TGGCACTGAGGCTGCAAC | 60.595 | 61.111 | 0.50 | 0.00 | 44.55 | 4.17 |
2073 | 2198 | 1.003118 | GACATTAGCACCACCTGACCA | 59.997 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
2397 | 2522 | 2.543777 | AGAGAAGTTTGGCGTGCTAA | 57.456 | 45.000 | 0.00 | 0.00 | 0.00 | 3.09 |
2454 | 2580 | 2.778299 | CCACAGCTGTAGCCAAACTTA | 58.222 | 47.619 | 21.20 | 0.00 | 43.38 | 2.24 |
2481 | 2641 | 7.148755 | CGCCACAAAATTTTATGGAGAAGAAAG | 60.149 | 37.037 | 28.37 | 7.44 | 34.25 | 2.62 |
2539 | 2700 | 2.990066 | GCTAACTGCCATGGTCTACT | 57.010 | 50.000 | 14.67 | 0.00 | 35.15 | 2.57 |
2683 | 4122 | 5.008331 | TCAGACTGTTCGGTACTAGACATT | 58.992 | 41.667 | 1.59 | 0.00 | 0.00 | 2.71 |
2727 | 4166 | 5.472148 | CCAACTTGTTATGTGCACATTCAT | 58.528 | 37.500 | 35.45 | 16.59 | 37.76 | 2.57 |
3010 | 4878 | 9.474920 | TGAAAATTTCACCTCACACATATTTTC | 57.525 | 29.630 | 4.03 | 0.00 | 39.43 | 2.29 |
3070 | 4938 | 1.548719 | GCCCCAATACCAACTGAAACC | 59.451 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
3077 | 5041 | 3.893200 | GGTTATTAGGCCCCAATACCAAC | 59.107 | 47.826 | 0.00 | 1.43 | 0.00 | 3.77 |
3225 | 5191 | 6.469410 | ACGGACTGTTCTGTAAATATTTGGA | 58.531 | 36.000 | 11.05 | 4.01 | 39.79 | 3.53 |
3428 | 5407 | 8.905103 | AAAGAATACAAAATATGGCGTTGTAC | 57.095 | 30.769 | 0.00 | 0.00 | 39.75 | 2.90 |
3733 | 5728 | 5.630121 | TGTTTGGAGGCAGAGATAAAGAAA | 58.370 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
3800 | 5800 | 5.636123 | TGAGTTAAGAAACTTAATGGGGCA | 58.364 | 37.500 | 7.13 | 1.17 | 46.09 | 5.36 |
4053 | 6100 | 0.330941 | TGCACCTCCCACATGCAATA | 59.669 | 50.000 | 0.00 | 0.00 | 45.96 | 1.90 |
4129 | 6176 | 6.867662 | ATGTATCTGCAGTAATGTTAAGGC | 57.132 | 37.500 | 14.67 | 0.00 | 0.00 | 4.35 |
4209 | 6257 | 2.939103 | GGTTCACTGATTTCTCCATCCG | 59.061 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4260 | 6308 | 1.737816 | ACGCACAGTTACCGTGAGT | 59.262 | 52.632 | 2.55 | 2.46 | 41.70 | 3.41 |
4264 | 6312 | 1.219522 | GCTTGACGCACAGTTACCGT | 61.220 | 55.000 | 0.00 | 0.00 | 38.92 | 4.83 |
4636 | 6732 | 1.282157 | AGAATTTTGGGACGGAGGGAG | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
4637 | 6733 | 1.368374 | AGAATTTTGGGACGGAGGGA | 58.632 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4638 | 6734 | 1.818674 | CAAGAATTTTGGGACGGAGGG | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
4639 | 6735 | 2.488153 | GACAAGAATTTTGGGACGGAGG | 59.512 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4640 | 6736 | 3.412386 | AGACAAGAATTTTGGGACGGAG | 58.588 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
4641 | 6737 | 3.502123 | AGACAAGAATTTTGGGACGGA | 57.498 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
4642 | 6738 | 5.699097 | TTAAGACAAGAATTTTGGGACGG | 57.301 | 39.130 | 0.00 | 0.00 | 0.00 | 4.79 |
4643 | 6739 | 8.487176 | CAAATTTAAGACAAGAATTTTGGGACG | 58.513 | 33.333 | 0.00 | 0.00 | 32.35 | 4.79 |
4644 | 6740 | 9.325198 | ACAAATTTAAGACAAGAATTTTGGGAC | 57.675 | 29.630 | 0.00 | 0.00 | 33.39 | 4.46 |
4645 | 6741 | 9.541143 | GACAAATTTAAGACAAGAATTTTGGGA | 57.459 | 29.630 | 0.00 | 0.00 | 33.39 | 4.37 |
4646 | 6742 | 9.546428 | AGACAAATTTAAGACAAGAATTTTGGG | 57.454 | 29.630 | 0.00 | 0.00 | 33.39 | 4.12 |
4668 | 6764 | 9.764363 | GTGACTTGATACATCCATATTTAGACA | 57.236 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
4669 | 6765 | 8.916654 | CGTGACTTGATACATCCATATTTAGAC | 58.083 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
4670 | 6766 | 8.638873 | ACGTGACTTGATACATCCATATTTAGA | 58.361 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
4671 | 6767 | 8.818141 | ACGTGACTTGATACATCCATATTTAG | 57.182 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
4672 | 6768 | 9.607988 | AAACGTGACTTGATACATCCATATTTA | 57.392 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
4673 | 6769 | 8.506168 | AAACGTGACTTGATACATCCATATTT | 57.494 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
4674 | 6770 | 8.506168 | AAAACGTGACTTGATACATCCATATT | 57.494 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
4675 | 6771 | 9.261180 | CTAAAACGTGACTTGATACATCCATAT | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
4676 | 6772 | 8.255206 | ACTAAAACGTGACTTGATACATCCATA | 58.745 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
4677 | 6773 | 7.103641 | ACTAAAACGTGACTTGATACATCCAT | 58.896 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
4678 | 6774 | 6.460781 | ACTAAAACGTGACTTGATACATCCA | 58.539 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4679 | 6775 | 6.963049 | ACTAAAACGTGACTTGATACATCC | 57.037 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
4689 | 6785 | 9.962783 | GGATGTATCTAATACTAAAACGTGACT | 57.037 | 33.333 | 0.00 | 0.00 | 36.70 | 3.41 |
4690 | 6786 | 8.899776 | CGGATGTATCTAATACTAAAACGTGAC | 58.100 | 37.037 | 0.00 | 0.00 | 36.70 | 3.67 |
4691 | 6787 | 8.623903 | ACGGATGTATCTAATACTAAAACGTGA | 58.376 | 33.333 | 0.00 | 0.00 | 36.70 | 4.35 |
4692 | 6788 | 8.792831 | ACGGATGTATCTAATACTAAAACGTG | 57.207 | 34.615 | 0.00 | 0.00 | 36.70 | 4.49 |
4709 | 6805 | 9.788889 | TCTTAGATTTGTCTAGATACGGATGTA | 57.211 | 33.333 | 0.00 | 0.00 | 34.45 | 2.29 |
4710 | 6806 | 8.569641 | GTCTTAGATTTGTCTAGATACGGATGT | 58.430 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
4711 | 6807 | 8.568794 | TGTCTTAGATTTGTCTAGATACGGATG | 58.431 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
4712 | 6808 | 8.693120 | TGTCTTAGATTTGTCTAGATACGGAT | 57.307 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
4713 | 6809 | 8.515695 | TTGTCTTAGATTTGTCTAGATACGGA | 57.484 | 34.615 | 0.00 | 0.00 | 0.00 | 4.69 |
4714 | 6810 | 8.622157 | TCTTGTCTTAGATTTGTCTAGATACGG | 58.378 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
4726 | 6822 | 9.463443 | CCGTTTCAAAATTCTTGTCTTAGATTT | 57.537 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
4727 | 6823 | 8.846211 | TCCGTTTCAAAATTCTTGTCTTAGATT | 58.154 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
4728 | 6824 | 8.391075 | TCCGTTTCAAAATTCTTGTCTTAGAT | 57.609 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
4729 | 6825 | 7.041372 | CCTCCGTTTCAAAATTCTTGTCTTAGA | 60.041 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
4730 | 6826 | 7.078228 | CCTCCGTTTCAAAATTCTTGTCTTAG | 58.922 | 38.462 | 0.00 | 0.00 | 0.00 | 2.18 |
4731 | 6827 | 6.016610 | CCCTCCGTTTCAAAATTCTTGTCTTA | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
4732 | 6828 | 5.221244 | CCCTCCGTTTCAAAATTCTTGTCTT | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4733 | 6829 | 4.278419 | CCCTCCGTTTCAAAATTCTTGTCT | 59.722 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
4734 | 6830 | 4.277423 | TCCCTCCGTTTCAAAATTCTTGTC | 59.723 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
4735 | 6831 | 4.211920 | TCCCTCCGTTTCAAAATTCTTGT | 58.788 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
4736 | 6832 | 4.278419 | ACTCCCTCCGTTTCAAAATTCTTG | 59.722 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
4737 | 6833 | 4.470602 | ACTCCCTCCGTTTCAAAATTCTT | 58.529 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
4738 | 6834 | 4.100279 | ACTCCCTCCGTTTCAAAATTCT | 57.900 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
4739 | 6835 | 5.243207 | TCTACTCCCTCCGTTTCAAAATTC | 58.757 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
4740 | 6836 | 5.237236 | TCTACTCCCTCCGTTTCAAAATT | 57.763 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
4741 | 6837 | 4.903045 | TCTACTCCCTCCGTTTCAAAAT | 57.097 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
4742 | 6838 | 4.102054 | AGTTCTACTCCCTCCGTTTCAAAA | 59.898 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
4743 | 6839 | 3.644738 | AGTTCTACTCCCTCCGTTTCAAA | 59.355 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
4744 | 6840 | 3.236896 | AGTTCTACTCCCTCCGTTTCAA | 58.763 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
4745 | 6841 | 2.885616 | AGTTCTACTCCCTCCGTTTCA | 58.114 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
4746 | 6842 | 3.957591 | AAGTTCTACTCCCTCCGTTTC | 57.042 | 47.619 | 0.00 | 0.00 | 0.00 | 2.78 |
4747 | 6843 | 6.370186 | AAATAAGTTCTACTCCCTCCGTTT | 57.630 | 37.500 | 0.00 | 0.00 | 0.00 | 3.60 |
4748 | 6844 | 6.666980 | ACTAAATAAGTTCTACTCCCTCCGTT | 59.333 | 38.462 | 0.00 | 0.00 | 33.35 | 4.44 |
4749 | 6845 | 6.193504 | ACTAAATAAGTTCTACTCCCTCCGT | 58.806 | 40.000 | 0.00 | 0.00 | 33.35 | 4.69 |
4750 | 6846 | 6.712179 | ACTAAATAAGTTCTACTCCCTCCG | 57.288 | 41.667 | 0.00 | 0.00 | 33.35 | 4.63 |
4771 | 6867 | 6.803642 | ACTGAAGTAAAGTCAACTACGAACT | 58.196 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4774 | 6870 | 8.355169 | ACAATACTGAAGTAAAGTCAACTACGA | 58.645 | 33.333 | 0.00 | 0.00 | 33.76 | 3.43 |
4777 | 6873 | 8.867097 | AGGACAATACTGAAGTAAAGTCAACTA | 58.133 | 33.333 | 19.01 | 0.00 | 38.74 | 2.24 |
4779 | 6875 | 7.964604 | AGGACAATACTGAAGTAAAGTCAAC | 57.035 | 36.000 | 19.01 | 9.15 | 38.74 | 3.18 |
5170 | 7433 | 1.761784 | AGTAGCCAGCAGGATCTTCTG | 59.238 | 52.381 | 0.00 | 0.00 | 36.89 | 3.02 |
5171 | 7434 | 2.173126 | AGTAGCCAGCAGGATCTTCT | 57.827 | 50.000 | 0.00 | 0.00 | 36.89 | 2.85 |
5223 | 7487 | 3.438216 | TGAATGATGGCCTTGTGAAGA | 57.562 | 42.857 | 3.32 | 0.00 | 0.00 | 2.87 |
5224 | 7488 | 3.697542 | TGATGAATGATGGCCTTGTGAAG | 59.302 | 43.478 | 3.32 | 0.00 | 0.00 | 3.02 |
5270 | 7534 | 2.358957 | TGAATCCATCAAGAAGCACCG | 58.641 | 47.619 | 0.00 | 0.00 | 34.30 | 4.94 |
5467 | 7740 | 1.804151 | ACCCACAATCAATGTTCGACG | 59.196 | 47.619 | 0.00 | 0.00 | 41.46 | 5.12 |
5468 | 7741 | 2.552315 | ACACCCACAATCAATGTTCGAC | 59.448 | 45.455 | 0.00 | 0.00 | 41.46 | 4.20 |
5476 | 7749 | 1.612950 | GCACATCACACCCACAATCAA | 59.387 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
5625 | 7899 | 8.702163 | TTGATTGAAAAAGAAAGGACTTGAAC | 57.298 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
5638 | 7912 | 8.000435 | GCACGAAAGAATCTTTGATTGAAAAAG | 59.000 | 33.333 | 13.55 | 0.00 | 36.22 | 2.27 |
5643 | 7917 | 4.711721 | CGCACGAAAGAATCTTTGATTGA | 58.288 | 39.130 | 13.55 | 0.00 | 0.00 | 2.57 |
5645 | 7919 | 3.189287 | AGCGCACGAAAGAATCTTTGATT | 59.811 | 39.130 | 13.55 | 0.00 | 0.00 | 2.57 |
5646 | 7920 | 2.744202 | AGCGCACGAAAGAATCTTTGAT | 59.256 | 40.909 | 13.55 | 0.00 | 0.00 | 2.57 |
5647 | 7921 | 2.143122 | AGCGCACGAAAGAATCTTTGA | 58.857 | 42.857 | 13.55 | 0.00 | 0.00 | 2.69 |
5653 | 7927 | 1.726791 | CACACTAGCGCACGAAAGAAT | 59.273 | 47.619 | 11.47 | 0.00 | 0.00 | 2.40 |
5679 | 7953 | 3.969250 | TTGAACATCCCGAGGGCGC | 62.969 | 63.158 | 0.00 | 0.00 | 35.83 | 6.53 |
5716 | 7990 | 5.886960 | AGATAACAAACTGCACTTCCATC | 57.113 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
5758 | 8032 | 4.965119 | AAATTCGAGTCAATTGCTACCC | 57.035 | 40.909 | 0.00 | 0.00 | 0.00 | 3.69 |
5812 | 8086 | 5.367644 | CAGGATCCATACCTCCATATATGCA | 59.632 | 44.000 | 15.82 | 0.00 | 35.35 | 3.96 |
5814 | 8088 | 5.907662 | ACCAGGATCCATACCTCCATATATG | 59.092 | 44.000 | 15.82 | 5.68 | 35.35 | 1.78 |
5882 | 8203 | 2.980246 | AGGAAAGGGAAAACTGGAGG | 57.020 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5894 | 8216 | 6.359804 | TCTGAATGGAATGTCATAGGAAAGG | 58.640 | 40.000 | 0.00 | 0.00 | 0.00 | 3.11 |
5941 | 8263 | 6.910433 | CCATATTGTAACAACTAACAATCCGC | 59.090 | 38.462 | 4.11 | 0.00 | 43.44 | 5.54 |
5972 | 8297 | 6.868622 | ACTTGGTTAAGTACTGAGCTCTATG | 58.131 | 40.000 | 16.19 | 7.77 | 45.07 | 2.23 |
5973 | 8298 | 6.893005 | AGACTTGGTTAAGTACTGAGCTCTAT | 59.107 | 38.462 | 16.19 | 5.38 | 46.79 | 1.98 |
5974 | 8299 | 6.246919 | AGACTTGGTTAAGTACTGAGCTCTA | 58.753 | 40.000 | 16.19 | 0.00 | 46.79 | 2.43 |
5975 | 8300 | 5.081032 | AGACTTGGTTAAGTACTGAGCTCT | 58.919 | 41.667 | 16.19 | 0.00 | 46.79 | 4.09 |
5976 | 8301 | 5.047943 | TGAGACTTGGTTAAGTACTGAGCTC | 60.048 | 44.000 | 6.82 | 6.82 | 46.79 | 4.09 |
5979 | 8304 | 6.642950 | CAGTTGAGACTTGGTTAAGTACTGAG | 59.357 | 42.308 | 12.21 | 0.00 | 46.79 | 3.35 |
5980 | 8305 | 6.322969 | TCAGTTGAGACTTGGTTAAGTACTGA | 59.677 | 38.462 | 14.64 | 14.64 | 46.36 | 3.41 |
5981 | 8306 | 6.513180 | TCAGTTGAGACTTGGTTAAGTACTG | 58.487 | 40.000 | 0.00 | 11.68 | 46.79 | 2.74 |
5983 | 8308 | 6.421202 | CACTCAGTTGAGACTTGGTTAAGTAC | 59.579 | 42.308 | 15.63 | 0.00 | 46.79 | 2.73 |
6001 | 8332 | 2.515854 | ACTACGGTGATGTCACTCAGT | 58.484 | 47.619 | 12.43 | 11.95 | 45.73 | 3.41 |
6003 | 8334 | 2.626266 | ACAACTACGGTGATGTCACTCA | 59.374 | 45.455 | 12.43 | 0.00 | 45.73 | 3.41 |
6043 | 8397 | 1.333308 | CGTCCTGTTTGCAACATGTCA | 59.667 | 47.619 | 0.00 | 0.00 | 41.26 | 3.58 |
6048 | 8402 | 1.139256 | TCTACCGTCCTGTTTGCAACA | 59.861 | 47.619 | 0.00 | 0.00 | 39.52 | 3.33 |
6050 | 8404 | 1.870580 | CGTCTACCGTCCTGTTTGCAA | 60.871 | 52.381 | 0.00 | 0.00 | 0.00 | 4.08 |
6056 | 8410 | 1.364626 | CGTAGCGTCTACCGTCCTGT | 61.365 | 60.000 | 10.20 | 0.00 | 39.32 | 4.00 |
6057 | 8411 | 1.086067 | TCGTAGCGTCTACCGTCCTG | 61.086 | 60.000 | 10.20 | 0.00 | 39.32 | 3.86 |
6058 | 8412 | 0.809241 | CTCGTAGCGTCTACCGTCCT | 60.809 | 60.000 | 10.20 | 0.00 | 39.32 | 3.85 |
6062 | 8416 | 0.935898 | ATGTCTCGTAGCGTCTACCG | 59.064 | 55.000 | 10.20 | 6.86 | 40.40 | 4.02 |
6143 | 8497 | 0.724549 | TCCGTCATTCGCAAATTCCG | 59.275 | 50.000 | 0.00 | 0.00 | 38.35 | 4.30 |
6149 | 8503 | 1.876799 | ACATTGTTCCGTCATTCGCAA | 59.123 | 42.857 | 0.00 | 0.00 | 38.35 | 4.85 |
6187 | 8541 | 1.003696 | TGTCACCAGTTGTTGTGTCCA | 59.996 | 47.619 | 0.00 | 0.00 | 34.14 | 4.02 |
6189 | 8543 | 1.062002 | CGTGTCACCAGTTGTTGTGTC | 59.938 | 52.381 | 0.00 | 0.00 | 34.14 | 3.67 |
6208 | 8562 | 2.177531 | GCTGGTTGCAGCATGTCG | 59.822 | 61.111 | 2.05 | 0.00 | 46.73 | 4.35 |
6230 | 8584 | 3.433615 | GTCTTACCAGTCACAACATCTGC | 59.566 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
6232 | 8586 | 3.572682 | TCGTCTTACCAGTCACAACATCT | 59.427 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
6237 | 8591 | 3.491964 | CCACTTCGTCTTACCAGTCACAA | 60.492 | 47.826 | 0.00 | 0.00 | 0.00 | 3.33 |
6240 | 8594 | 2.313317 | ACCACTTCGTCTTACCAGTCA | 58.687 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
6246 | 8600 | 2.155155 | CGCTTGAACCACTTCGTCTTAC | 59.845 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
6248 | 8602 | 1.217882 | CGCTTGAACCACTTCGTCTT | 58.782 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
6252 | 8606 | 1.569493 | CACCGCTTGAACCACTTCG | 59.431 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
6259 | 8613 | 0.875059 | CTTCTTCCCACCGCTTGAAC | 59.125 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
6261 | 8615 | 0.250295 | CACTTCTTCCCACCGCTTGA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6277 | 8631 | 0.392998 | CAAATGGCCCTCGTAGCACT | 60.393 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6289 | 8643 | 0.593128 | AGTGAGCAACGTCAAATGGC | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6291 | 8645 | 3.181526 | GCTAGAGTGAGCAACGTCAAATG | 60.182 | 47.826 | 0.00 | 0.00 | 42.36 | 2.32 |
6292 | 8646 | 2.996621 | GCTAGAGTGAGCAACGTCAAAT | 59.003 | 45.455 | 0.00 | 0.00 | 42.36 | 2.32 |
6324 | 8678 | 3.440173 | CACTAACCGTTGGATCTTTGCAT | 59.560 | 43.478 | 1.05 | 0.00 | 0.00 | 3.96 |
6325 | 8679 | 2.811431 | CACTAACCGTTGGATCTTTGCA | 59.189 | 45.455 | 1.05 | 0.00 | 0.00 | 4.08 |
6338 | 8692 | 1.200716 | TCAGTCGGCTTACACTAACCG | 59.799 | 52.381 | 0.00 | 0.00 | 46.97 | 4.44 |
6363 | 8718 | 6.412214 | AGACAATATAGTAACGGGTTTGCTT | 58.588 | 36.000 | 0.00 | 0.00 | 31.68 | 3.91 |
6449 | 8807 | 5.123936 | CCCTATAAACCGGAAAGGAGAAAG | 58.876 | 45.833 | 9.46 | 0.00 | 45.00 | 2.62 |
6450 | 8808 | 4.627013 | GCCCTATAAACCGGAAAGGAGAAA | 60.627 | 45.833 | 9.46 | 0.00 | 45.00 | 2.52 |
6451 | 8809 | 3.118149 | GCCCTATAAACCGGAAAGGAGAA | 60.118 | 47.826 | 9.46 | 0.00 | 45.00 | 2.87 |
6452 | 8810 | 2.436911 | GCCCTATAAACCGGAAAGGAGA | 59.563 | 50.000 | 9.46 | 0.00 | 45.00 | 3.71 |
6453 | 8811 | 2.438392 | AGCCCTATAAACCGGAAAGGAG | 59.562 | 50.000 | 9.46 | 0.00 | 45.00 | 3.69 |
6454 | 8812 | 2.436911 | GAGCCCTATAAACCGGAAAGGA | 59.563 | 50.000 | 9.46 | 0.00 | 45.00 | 3.36 |
6456 | 8814 | 3.553828 | TGAGCCCTATAAACCGGAAAG | 57.446 | 47.619 | 9.46 | 0.00 | 0.00 | 2.62 |
6457 | 8815 | 4.513406 | ATTGAGCCCTATAAACCGGAAA | 57.487 | 40.909 | 9.46 | 0.00 | 0.00 | 3.13 |
6458 | 8816 | 4.080243 | TGAATTGAGCCCTATAAACCGGAA | 60.080 | 41.667 | 9.46 | 0.00 | 0.00 | 4.30 |
6459 | 8817 | 3.456644 | TGAATTGAGCCCTATAAACCGGA | 59.543 | 43.478 | 9.46 | 0.00 | 0.00 | 5.14 |
6460 | 8818 | 3.815809 | TGAATTGAGCCCTATAAACCGG | 58.184 | 45.455 | 0.00 | 0.00 | 0.00 | 5.28 |
6461 | 8819 | 5.828299 | TTTGAATTGAGCCCTATAAACCG | 57.172 | 39.130 | 0.00 | 0.00 | 0.00 | 4.44 |
6462 | 8820 | 8.478066 | AGATTTTTGAATTGAGCCCTATAAACC | 58.522 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
6463 | 8821 | 9.521503 | GAGATTTTTGAATTGAGCCCTATAAAC | 57.478 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
6464 | 8822 | 9.253832 | TGAGATTTTTGAATTGAGCCCTATAAA | 57.746 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
6465 | 8823 | 8.686334 | GTGAGATTTTTGAATTGAGCCCTATAA | 58.314 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
6466 | 8824 | 7.285401 | GGTGAGATTTTTGAATTGAGCCCTATA | 59.715 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
6467 | 8825 | 6.097412 | GGTGAGATTTTTGAATTGAGCCCTAT | 59.903 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
6468 | 8826 | 5.418840 | GGTGAGATTTTTGAATTGAGCCCTA | 59.581 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6469 | 8827 | 4.221482 | GGTGAGATTTTTGAATTGAGCCCT | 59.779 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
6470 | 8828 | 4.021192 | TGGTGAGATTTTTGAATTGAGCCC | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
6471 | 8829 | 5.138125 | TGGTGAGATTTTTGAATTGAGCC | 57.862 | 39.130 | 0.00 | 0.00 | 0.00 | 4.70 |
6472 | 8830 | 5.406477 | GGTTGGTGAGATTTTTGAATTGAGC | 59.594 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
6473 | 8831 | 6.514947 | TGGTTGGTGAGATTTTTGAATTGAG | 58.485 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6474 | 8832 | 6.477053 | TGGTTGGTGAGATTTTTGAATTGA | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
6475 | 8833 | 6.985645 | TCTTGGTTGGTGAGATTTTTGAATTG | 59.014 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
6476 | 8834 | 7.123355 | TCTTGGTTGGTGAGATTTTTGAATT | 57.877 | 32.000 | 0.00 | 0.00 | 0.00 | 2.17 |
6477 | 8835 | 6.729690 | TCTTGGTTGGTGAGATTTTTGAAT | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
6478 | 8836 | 6.729690 | ATCTTGGTTGGTGAGATTTTTGAA | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
6479 | 8837 | 7.831691 | TTATCTTGGTTGGTGAGATTTTTGA | 57.168 | 32.000 | 0.00 | 0.00 | 32.68 | 2.69 |
6480 | 8838 | 8.928733 | CATTTATCTTGGTTGGTGAGATTTTTG | 58.071 | 33.333 | 0.00 | 0.00 | 32.68 | 2.44 |
6481 | 8839 | 8.096414 | CCATTTATCTTGGTTGGTGAGATTTTT | 58.904 | 33.333 | 0.00 | 0.00 | 32.68 | 1.94 |
6482 | 8840 | 7.235399 | ACCATTTATCTTGGTTGGTGAGATTTT | 59.765 | 33.333 | 0.00 | 0.00 | 45.19 | 1.82 |
6483 | 8841 | 6.725834 | ACCATTTATCTTGGTTGGTGAGATTT | 59.274 | 34.615 | 0.00 | 0.00 | 45.19 | 2.17 |
6484 | 8842 | 6.256053 | ACCATTTATCTTGGTTGGTGAGATT | 58.744 | 36.000 | 0.00 | 0.00 | 45.19 | 2.40 |
6485 | 8843 | 5.831103 | ACCATTTATCTTGGTTGGTGAGAT | 58.169 | 37.500 | 0.00 | 0.00 | 45.19 | 2.75 |
6486 | 8844 | 5.255397 | ACCATTTATCTTGGTTGGTGAGA | 57.745 | 39.130 | 0.00 | 0.00 | 45.19 | 3.27 |
6490 | 8848 | 4.766891 | CACTCACCATTTATCTTGGTTGGT | 59.233 | 41.667 | 0.00 | 0.00 | 45.19 | 3.67 |
6491 | 8849 | 4.158394 | CCACTCACCATTTATCTTGGTTGG | 59.842 | 45.833 | 0.00 | 0.00 | 45.19 | 3.77 |
6492 | 8850 | 4.766891 | ACCACTCACCATTTATCTTGGTTG | 59.233 | 41.667 | 0.00 | 0.00 | 45.19 | 3.77 |
6493 | 8851 | 4.766891 | CACCACTCACCATTTATCTTGGTT | 59.233 | 41.667 | 0.00 | 0.00 | 45.19 | 3.67 |
6495 | 8853 | 3.696051 | CCACCACTCACCATTTATCTTGG | 59.304 | 47.826 | 0.00 | 0.00 | 40.26 | 3.61 |
6496 | 8854 | 4.588899 | TCCACCACTCACCATTTATCTTG | 58.411 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
6497 | 8855 | 4.927267 | TCCACCACTCACCATTTATCTT | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
6498 | 8856 | 4.927267 | TTCCACCACTCACCATTTATCT | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
6499 | 8857 | 6.357367 | AGTATTCCACCACTCACCATTTATC | 58.643 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
6500 | 8858 | 6.327386 | AGTATTCCACCACTCACCATTTAT | 57.673 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
6501 | 8859 | 5.772393 | AGTATTCCACCACTCACCATTTA | 57.228 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
6502 | 8860 | 4.657814 | AGTATTCCACCACTCACCATTT | 57.342 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
6503 | 8861 | 4.657814 | AAGTATTCCACCACTCACCATT | 57.342 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
6504 | 8862 | 4.657814 | AAAGTATTCCACCACTCACCAT | 57.342 | 40.909 | 0.00 | 0.00 | 0.00 | 3.55 |
6505 | 8863 | 4.447138 | AAAAGTATTCCACCACTCACCA | 57.553 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
6506 | 8864 | 4.583073 | ACAAAAAGTATTCCACCACTCACC | 59.417 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
6507 | 8865 | 5.767816 | ACAAAAAGTATTCCACCACTCAC | 57.232 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
6508 | 8866 | 8.472007 | AATTACAAAAAGTATTCCACCACTCA | 57.528 | 30.769 | 0.00 | 0.00 | 31.53 | 3.41 |
6509 | 8867 | 9.191995 | CAAATTACAAAAAGTATTCCACCACTC | 57.808 | 33.333 | 0.00 | 0.00 | 31.53 | 3.51 |
6510 | 8868 | 7.655732 | GCAAATTACAAAAAGTATTCCACCACT | 59.344 | 33.333 | 0.00 | 0.00 | 31.53 | 4.00 |
6511 | 8869 | 7.439655 | TGCAAATTACAAAAAGTATTCCACCAC | 59.560 | 33.333 | 0.00 | 0.00 | 31.53 | 4.16 |
6512 | 8870 | 7.500992 | TGCAAATTACAAAAAGTATTCCACCA | 58.499 | 30.769 | 0.00 | 0.00 | 31.53 | 4.17 |
6513 | 8871 | 7.954788 | TGCAAATTACAAAAAGTATTCCACC | 57.045 | 32.000 | 0.00 | 0.00 | 31.53 | 4.61 |
6516 | 8874 | 9.381027 | GCTTTTGCAAATTACAAAAAGTATTCC | 57.619 | 29.630 | 13.65 | 0.00 | 44.07 | 3.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.