Multiple sequence alignment - TraesCS2D01G141000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G141000 chr2D 100.000 5323 0 0 1 5323 83132335 83127013 0.000000e+00 9830
1 TraesCS2D01G141000 chr2D 97.436 156 0 3 5169 5321 83106102 83105948 4.090000e-66 263
2 TraesCS2D01G141000 chr2D 96.835 158 1 3 5169 5323 83121726 83121570 1.470000e-65 261
3 TraesCS2D01G141000 chr2D 96.711 152 4 1 5172 5323 515613235 515613385 8.850000e-63 252
4 TraesCS2D01G141000 chr2D 95.570 158 3 3 5169 5323 313659060 313658904 3.180000e-62 250
5 TraesCS2D01G141000 chr2A 94.360 2748 116 19 1873 4589 83817813 83815074 0.000000e+00 4180
6 TraesCS2D01G141000 chr2A 89.541 1941 103 40 1 1873 83819761 83817853 0.000000e+00 2368
7 TraesCS2D01G141000 chr2B 92.494 2851 185 23 1873 4706 134997183 134994345 0.000000e+00 4052
8 TraesCS2D01G141000 chr2B 92.352 1909 85 26 1 1867 134999136 134997247 0.000000e+00 2660
9 TraesCS2D01G141000 chr2B 89.655 58 6 0 4882 4939 134993604 134993547 2.060000e-09 75
10 TraesCS2D01G141000 chr5B 94.007 1218 62 7 3375 4586 492098849 492097637 0.000000e+00 1834
11 TraesCS2D01G141000 chr5B 86.508 126 12 5 4655 4776 492097639 492097515 3.340000e-27 134
12 TraesCS2D01G141000 chr7B 93.350 1218 69 8 3375 4586 188590461 188589250 0.000000e+00 1790
13 TraesCS2D01G141000 chr7B 86.508 126 12 5 4655 4776 188589252 188589128 3.340000e-27 134
14 TraesCS2D01G141000 chr5A 93.186 1218 71 8 3375 4586 589025443 589026654 0.000000e+00 1779
15 TraesCS2D01G141000 chr5A 86.508 126 12 5 4655 4776 589026652 589026776 3.340000e-27 134
16 TraesCS2D01G141000 chrUn 93.696 1158 65 7 3375 4530 369803402 369804553 0.000000e+00 1727
17 TraesCS2D01G141000 chr6B 93.416 972 52 9 3375 4344 695778605 695779566 0.000000e+00 1430
18 TraesCS2D01G141000 chr7D 97.959 147 2 1 5177 5323 45828653 45828508 2.460000e-63 254
19 TraesCS2D01G141000 chr7D 95.597 159 2 3 5169 5323 589535459 589535616 3.180000e-62 250
20 TraesCS2D01G141000 chr5D 96.711 152 3 2 5172 5323 278352063 278352212 8.850000e-63 252
21 TraesCS2D01G141000 chr3D 95.570 158 3 3 5169 5323 569500849 569501005 3.180000e-62 250
22 TraesCS2D01G141000 chr3A 95.570 158 3 3 5169 5323 9259394 9259550 3.180000e-62 250


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G141000 chr2D 83127013 83132335 5322 True 9830.000000 9830 100.000000 1 5323 1 chr2D.!!$R3 5322
1 TraesCS2D01G141000 chr2A 83815074 83819761 4687 True 3274.000000 4180 91.950500 1 4589 2 chr2A.!!$R1 4588
2 TraesCS2D01G141000 chr2B 134993547 134999136 5589 True 2262.333333 4052 91.500333 1 4939 3 chr2B.!!$R1 4938
3 TraesCS2D01G141000 chr5B 492097515 492098849 1334 True 984.000000 1834 90.257500 3375 4776 2 chr5B.!!$R1 1401
4 TraesCS2D01G141000 chr7B 188589128 188590461 1333 True 962.000000 1790 89.929000 3375 4776 2 chr7B.!!$R1 1401
5 TraesCS2D01G141000 chr5A 589025443 589026776 1333 False 956.500000 1779 89.847000 3375 4776 2 chr5A.!!$F1 1401
6 TraesCS2D01G141000 chrUn 369803402 369804553 1151 False 1727.000000 1727 93.696000 3375 4530 1 chrUn.!!$F1 1155
7 TraesCS2D01G141000 chr6B 695778605 695779566 961 False 1430.000000 1430 93.416000 3375 4344 1 chr6B.!!$F1 969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
850 898 0.247736 GTGGTCAGATCTCAGCCGTT 59.752 55.000 0.0 0.0 0.00 4.44 F
1303 1371 0.388520 GCTTGGTGATTTGAACCCGC 60.389 55.000 0.0 0.0 36.83 6.13 F
1305 1373 1.613437 CTTGGTGATTTGAACCCGCTT 59.387 47.619 0.0 0.0 36.83 4.68 F
2055 2185 1.777878 TGTTTTGGACTTGAGCCCCTA 59.222 47.619 0.0 0.0 0.00 3.53 F
3516 3671 0.329261 AAGCCCTATTGTGCTGCTCA 59.671 50.000 0.0 0.0 38.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1742 1812 0.466124 ATGGCGGCTCTCTAGAAACC 59.534 55.000 11.43 0.00 0.00 3.27 R
2135 2269 0.536006 GTGTCTTGCCAGAGCCTGTT 60.536 55.000 0.00 0.00 38.69 3.16 R
2465 2599 5.133941 AGGTCTCTCTTTCGTATAGCATGA 58.866 41.667 0.00 0.00 0.00 3.07 R
3996 4159 1.878522 CGCGGACTCAGGGAAATCG 60.879 63.158 0.00 0.00 0.00 3.34 R
5061 5868 0.036765 TAGTGATGTTCGGTGGCCAC 60.037 55.000 28.57 28.57 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 101 6.463995 AAATGTTGTGGCTTTAGTTCAAGA 57.536 33.333 0.00 0.00 0.00 3.02
97 102 5.695851 ATGTTGTGGCTTTAGTTCAAGAG 57.304 39.130 0.00 0.00 0.00 2.85
108 128 3.492102 AGTTCAAGAGCTAAAGCCACA 57.508 42.857 0.00 0.00 43.38 4.17
118 140 4.682787 AGCTAAAGCCACAACACTTTTTC 58.317 39.130 0.00 0.00 43.38 2.29
128 150 4.036262 CACAACACTTTTTCTGGATCGGAA 59.964 41.667 0.00 0.00 0.00 4.30
147 169 3.193479 GGAAGGAGTGCCATTTTACCAAG 59.807 47.826 0.00 0.00 36.29 3.61
148 170 2.807676 AGGAGTGCCATTTTACCAAGG 58.192 47.619 0.00 0.00 36.29 3.61
157 179 3.368323 CCATTTTACCAAGGGATGCACAC 60.368 47.826 0.00 0.00 0.00 3.82
180 202 1.568612 ATCACCACGAGCTGCAAACG 61.569 55.000 1.02 7.36 0.00 3.60
199 221 2.039746 ACGAAATCACCAACATGGGAGA 59.960 45.455 0.00 0.00 43.37 3.71
206 228 2.093447 CACCAACATGGGAGACTAGGAC 60.093 54.545 0.00 0.00 43.37 3.85
249 271 1.272781 CTCGCCGAAAACTAGAGCTG 58.727 55.000 0.00 0.00 0.00 4.24
274 296 2.225491 TGAATTTCACCGCTGCAGTAAC 59.775 45.455 16.64 0.00 0.00 2.50
359 381 1.325476 CCAAATCCTTCAGGCTGCCC 61.325 60.000 16.57 0.00 34.44 5.36
389 411 4.819761 GATCGCAGCACCTCCGCA 62.820 66.667 0.00 0.00 0.00 5.69
404 426 1.812922 CGCATCCCTGAGTCAGCAC 60.813 63.158 15.10 0.86 0.00 4.40
413 435 1.605710 CTGAGTCAGCACCAAAACCAG 59.394 52.381 7.33 0.00 0.00 4.00
426 448 1.412079 AAACCAGCACCAATCAGCAA 58.588 45.000 0.00 0.00 0.00 3.91
574 598 2.588877 ATCTCGCGCGGGGAAATG 60.589 61.111 31.95 11.26 0.00 2.32
691 732 1.027357 GCAAGGCACTGGATACCATG 58.973 55.000 0.00 0.00 40.86 3.66
850 898 0.247736 GTGGTCAGATCTCAGCCGTT 59.752 55.000 0.00 0.00 0.00 4.44
1287 1355 1.900498 GCTTGGAGTGGCTGTGCTT 60.900 57.895 0.00 0.00 0.00 3.91
1289 1357 1.521450 CTTGGAGTGGCTGTGCTTGG 61.521 60.000 0.00 0.00 0.00 3.61
1290 1358 2.113986 GGAGTGGCTGTGCTTGGT 59.886 61.111 0.00 0.00 0.00 3.67
1292 1360 1.227943 GAGTGGCTGTGCTTGGTGA 60.228 57.895 0.00 0.00 0.00 4.02
1295 1363 0.675633 GTGGCTGTGCTTGGTGATTT 59.324 50.000 0.00 0.00 0.00 2.17
1296 1364 0.675083 TGGCTGTGCTTGGTGATTTG 59.325 50.000 0.00 0.00 0.00 2.32
1297 1365 0.961019 GGCTGTGCTTGGTGATTTGA 59.039 50.000 0.00 0.00 0.00 2.69
1298 1366 1.340889 GGCTGTGCTTGGTGATTTGAA 59.659 47.619 0.00 0.00 0.00 2.69
1303 1371 0.388520 GCTTGGTGATTTGAACCCGC 60.389 55.000 0.00 0.00 36.83 6.13
1305 1373 1.613437 CTTGGTGATTTGAACCCGCTT 59.387 47.619 0.00 0.00 36.83 4.68
1439 1507 4.388499 GTGAGGCGGCGGAAGGAA 62.388 66.667 9.78 0.00 0.00 3.36
1477 1545 4.559153 GAGGTAATGCTGTTTTGCAATGT 58.441 39.130 0.00 0.00 46.61 2.71
1488 1556 5.664457 TGTTTTGCAATGTACCAATGTTCA 58.336 33.333 0.00 0.00 0.00 3.18
1508 1576 8.141298 TGTTCATAATCAGGGTTCAGTAGTAA 57.859 34.615 0.00 0.00 0.00 2.24
1509 1577 8.768397 TGTTCATAATCAGGGTTCAGTAGTAAT 58.232 33.333 0.00 0.00 0.00 1.89
1510 1578 9.046296 GTTCATAATCAGGGTTCAGTAGTAATG 57.954 37.037 0.00 0.00 0.00 1.90
1511 1579 8.319057 TCATAATCAGGGTTCAGTAGTAATGT 57.681 34.615 0.00 0.00 0.00 2.71
1512 1580 9.429109 TCATAATCAGGGTTCAGTAGTAATGTA 57.571 33.333 0.00 0.00 0.00 2.29
1513 1581 9.698309 CATAATCAGGGTTCAGTAGTAATGTAG 57.302 37.037 0.00 0.00 0.00 2.74
1514 1582 7.735326 AATCAGGGTTCAGTAGTAATGTAGT 57.265 36.000 0.00 0.00 0.00 2.73
1515 1583 8.834004 AATCAGGGTTCAGTAGTAATGTAGTA 57.166 34.615 0.00 0.00 0.00 1.82
1566 1634 4.813161 TGCTGAGCTGAATTAGTAAGCATC 59.187 41.667 5.83 0.00 39.47 3.91
1631 1700 5.587289 TGATGAGCAAAGTGGTTTTGTTAC 58.413 37.500 2.11 0.00 46.35 2.50
1756 1826 5.599999 TCTGTATTGGTTTCTAGAGAGCC 57.400 43.478 9.73 6.25 0.00 4.70
1853 1924 5.453567 ACTGGTTTCAAGGTTAGCATTTC 57.546 39.130 0.00 0.00 0.00 2.17
2010 2139 3.145286 GAGGCAGGCCATTTCTATTCTC 58.855 50.000 13.63 0.00 38.92 2.87
2047 2177 7.857885 GTGATCTTTTACTCTGTTTTGGACTTG 59.142 37.037 0.00 0.00 0.00 3.16
2048 2178 7.773224 TGATCTTTTACTCTGTTTTGGACTTGA 59.227 33.333 0.00 0.00 0.00 3.02
2049 2179 7.553881 TCTTTTACTCTGTTTTGGACTTGAG 57.446 36.000 0.00 0.00 36.41 3.02
2055 2185 1.777878 TGTTTTGGACTTGAGCCCCTA 59.222 47.619 0.00 0.00 0.00 3.53
2056 2186 2.378547 TGTTTTGGACTTGAGCCCCTAT 59.621 45.455 0.00 0.00 0.00 2.57
2238 2372 9.180678 GTAATGTTGTTTAGAATTGTTGGACAG 57.819 33.333 0.00 0.00 0.00 3.51
2240 2374 5.888724 TGTTGTTTAGAATTGTTGGACAGGA 59.111 36.000 0.00 0.00 0.00 3.86
2465 2599 1.674322 CACCCCGCTTCGTTTGGAT 60.674 57.895 0.00 0.00 0.00 3.41
2548 2684 9.868277 TTTTCTGTTTACCCATTTAGCATATTG 57.132 29.630 0.00 0.00 0.00 1.90
2690 2830 5.853936 TGATTGTATGGGTACACAGATAGC 58.146 41.667 3.20 0.00 40.40 2.97
2693 2833 3.386726 TGTATGGGTACACAGATAGCACC 59.613 47.826 3.20 0.00 35.94 5.01
2705 2845 7.165485 ACACAGATAGCACCTACATTACAAAA 58.835 34.615 0.00 0.00 0.00 2.44
2778 2919 4.808364 TGGCTGTTAAGTGTTTTCATTTGC 59.192 37.500 0.00 0.00 32.23 3.68
2862 3003 6.992063 ACATAACAAGACCAAATCAGCTAG 57.008 37.500 0.00 0.00 0.00 3.42
2923 3072 2.028385 GTCATGTGGTTTACCGAGGAGT 60.028 50.000 0.00 0.00 39.43 3.85
3054 3206 8.962884 ATAAACTTTTTGAGCTTGGATTTGTT 57.037 26.923 0.00 0.00 0.00 2.83
3087 3239 3.206034 TCAATTGTCAAAGCATGCTCG 57.794 42.857 22.93 15.60 0.00 5.03
3153 3305 0.654683 CAATAGAGGCTCTTGCACGC 59.345 55.000 24.13 0.00 41.91 5.34
3247 3400 5.649557 TCTGTTTTGCATGGGATATTTTCG 58.350 37.500 0.00 0.00 0.00 3.46
3412 3565 2.726821 TCTCCTGGTTTCCATGCATTC 58.273 47.619 0.00 0.00 30.82 2.67
3413 3566 1.402968 CTCCTGGTTTCCATGCATTCG 59.597 52.381 0.00 0.00 30.82 3.34
3431 3584 5.449304 CATTCGGTTGTTTTAGAACTGGTC 58.551 41.667 0.00 0.00 36.70 4.02
3516 3671 0.329261 AAGCCCTATTGTGCTGCTCA 59.671 50.000 0.00 0.00 38.00 4.26
3577 3739 6.488344 TGTTGAACTGCACATTTGTCCTTATA 59.512 34.615 0.00 0.00 0.00 0.98
3600 3762 2.604046 AAGGAGTCTGTGTGTGTGTC 57.396 50.000 0.00 0.00 0.00 3.67
3727 3890 6.072397 AGCTGGTATATGACGACATTAGAGTC 60.072 42.308 5.55 0.00 37.87 3.36
3829 3992 5.065988 TCCTGTAGTTTTCTGTTTTCACTGC 59.934 40.000 0.00 0.00 0.00 4.40
3996 4159 5.989777 AGGTGTCAACTGTGTAATCAACTAC 59.010 40.000 0.00 0.00 0.00 2.73
4057 4220 5.216614 AGGTAAGAAAGATATCCGGCTTC 57.783 43.478 0.00 0.00 0.00 3.86
4340 4506 7.993821 AGATTGAGAGTGATATTGTGTAACG 57.006 36.000 0.00 0.00 42.39 3.18
4437 4603 5.128008 AGCTTTCCTGACTAAGACCTGATAC 59.872 44.000 0.00 0.00 0.00 2.24
4438 4604 5.128008 GCTTTCCTGACTAAGACCTGATACT 59.872 44.000 0.00 0.00 0.00 2.12
4469 4635 5.049474 TGCATCCGAGCATATATTTTGTGAC 60.049 40.000 0.00 0.00 40.11 3.67
4470 4636 5.617751 GCATCCGAGCATATATTTTGTGACC 60.618 44.000 0.00 0.00 0.00 4.02
4475 4641 5.559608 CGAGCATATATTTTGTGACCTGCTG 60.560 44.000 0.00 0.00 38.72 4.41
4530 4696 7.884877 TCATTTCACTCCTAATCACAACTCATT 59.115 33.333 0.00 0.00 0.00 2.57
4533 4699 7.482169 TCACTCCTAATCACAACTCATTAGT 57.518 36.000 0.00 0.00 37.65 2.24
4589 4829 6.476378 ACAATAATCCTACATCTATGGGCAC 58.524 40.000 0.00 0.00 0.00 5.01
4590 4830 3.685139 AATCCTACATCTATGGGCACG 57.315 47.619 0.00 0.00 0.00 5.34
4591 4831 0.679505 TCCTACATCTATGGGCACGC 59.320 55.000 0.00 0.00 0.00 5.34
4592 4832 0.681733 CCTACATCTATGGGCACGCT 59.318 55.000 0.00 0.00 0.00 5.07
4593 4833 1.893137 CCTACATCTATGGGCACGCTA 59.107 52.381 0.00 0.00 0.00 4.26
4594 4834 2.352814 CCTACATCTATGGGCACGCTAC 60.353 54.545 0.00 0.00 0.00 3.58
4595 4835 1.119684 ACATCTATGGGCACGCTACA 58.880 50.000 0.00 0.00 0.00 2.74
4596 4836 1.069204 ACATCTATGGGCACGCTACAG 59.931 52.381 0.00 0.00 0.00 2.74
4597 4837 1.341209 CATCTATGGGCACGCTACAGA 59.659 52.381 0.00 0.00 0.00 3.41
4598 4838 1.704641 TCTATGGGCACGCTACAGAT 58.295 50.000 0.00 0.00 0.00 2.90
4599 4839 1.341209 TCTATGGGCACGCTACAGATG 59.659 52.381 0.00 0.00 0.00 2.90
4600 4840 1.069204 CTATGGGCACGCTACAGATGT 59.931 52.381 0.00 0.00 0.00 3.06
4601 4841 0.253044 ATGGGCACGCTACAGATGTT 59.747 50.000 0.00 0.00 0.00 2.71
4602 4842 0.036164 TGGGCACGCTACAGATGTTT 59.964 50.000 0.00 0.00 0.00 2.83
4603 4843 1.276705 TGGGCACGCTACAGATGTTTA 59.723 47.619 0.00 0.00 0.00 2.01
4604 4844 1.664151 GGGCACGCTACAGATGTTTAC 59.336 52.381 0.00 0.00 0.00 2.01
4605 4845 1.664151 GGCACGCTACAGATGTTTACC 59.336 52.381 0.00 0.00 0.00 2.85
4606 4846 1.323534 GCACGCTACAGATGTTTACCG 59.676 52.381 0.00 0.00 0.00 4.02
4607 4847 1.924524 CACGCTACAGATGTTTACCGG 59.075 52.381 0.00 0.00 0.00 5.28
4608 4848 1.820519 ACGCTACAGATGTTTACCGGA 59.179 47.619 9.46 0.00 0.00 5.14
4609 4849 2.231964 ACGCTACAGATGTTTACCGGAA 59.768 45.455 9.46 0.00 0.00 4.30
4610 4850 3.255725 CGCTACAGATGTTTACCGGAAA 58.744 45.455 9.46 1.01 0.00 3.13
4611 4851 3.061697 CGCTACAGATGTTTACCGGAAAC 59.938 47.826 9.46 15.01 46.57 2.78
4612 4852 4.251268 GCTACAGATGTTTACCGGAAACT 58.749 43.478 21.90 12.55 46.53 2.66
4613 4853 4.694037 GCTACAGATGTTTACCGGAAACTT 59.306 41.667 21.90 17.90 46.53 2.66
4614 4854 5.163884 GCTACAGATGTTTACCGGAAACTTC 60.164 44.000 23.06 23.06 46.53 3.01
4615 4855 4.070009 ACAGATGTTTACCGGAAACTTCC 58.930 43.478 24.85 16.42 46.24 3.46
4616 4856 4.069304 CAGATGTTTACCGGAAACTTCCA 58.931 43.478 24.85 12.15 46.24 3.53
4617 4857 4.517453 CAGATGTTTACCGGAAACTTCCAA 59.483 41.667 24.85 11.87 46.24 3.53
4618 4858 4.517832 AGATGTTTACCGGAAACTTCCAAC 59.482 41.667 24.85 6.01 46.24 3.77
4619 4859 5.689297 AGATGTTTACCGGAAACTTCCAACT 60.689 40.000 24.85 14.11 46.24 3.16
4620 4860 7.460925 AGATGTTTACCGGAAACTTCCAACTC 61.461 42.308 24.85 14.07 46.24 3.01
4621 4861 9.533110 AGATGTTTACCGGAAACTTCCAACTCT 62.533 40.741 24.85 15.20 46.24 3.24
4626 4866 3.060736 GGAAACTTCCAACTCTCCTCC 57.939 52.381 3.50 0.00 46.76 4.30
4627 4867 2.290387 GGAAACTTCCAACTCTCCTCCC 60.290 54.545 3.50 0.00 46.76 4.30
4628 4868 2.424684 AACTTCCAACTCTCCTCCCT 57.575 50.000 0.00 0.00 0.00 4.20
4629 4869 1.945580 ACTTCCAACTCTCCTCCCTC 58.054 55.000 0.00 0.00 0.00 4.30
4630 4870 1.150135 ACTTCCAACTCTCCTCCCTCA 59.850 52.381 0.00 0.00 0.00 3.86
4631 4871 1.552792 CTTCCAACTCTCCTCCCTCAC 59.447 57.143 0.00 0.00 0.00 3.51
4632 4872 0.252284 TCCAACTCTCCTCCCTCACC 60.252 60.000 0.00 0.00 0.00 4.02
4633 4873 1.268283 CCAACTCTCCTCCCTCACCC 61.268 65.000 0.00 0.00 0.00 4.61
4634 4874 1.081277 AACTCTCCTCCCTCACCCC 59.919 63.158 0.00 0.00 0.00 4.95
4635 4875 2.041405 CTCTCCTCCCTCACCCCC 60.041 72.222 0.00 0.00 0.00 5.40
4636 4876 4.075793 TCTCCTCCCTCACCCCCG 62.076 72.222 0.00 0.00 0.00 5.73
4637 4877 4.075793 CTCCTCCCTCACCCCCGA 62.076 72.222 0.00 0.00 0.00 5.14
4638 4878 4.393778 TCCTCCCTCACCCCCGAC 62.394 72.222 0.00 0.00 0.00 4.79
4643 4883 3.081409 CCTCACCCCCGACCGAAT 61.081 66.667 0.00 0.00 0.00 3.34
4644 4884 2.666098 CCTCACCCCCGACCGAATT 61.666 63.158 0.00 0.00 0.00 2.17
4645 4885 1.298667 CTCACCCCCGACCGAATTT 59.701 57.895 0.00 0.00 0.00 1.82
4646 4886 0.743345 CTCACCCCCGACCGAATTTC 60.743 60.000 0.00 0.00 0.00 2.17
4647 4887 1.003112 CACCCCCGACCGAATTTCA 60.003 57.895 0.00 0.00 0.00 2.69
4648 4888 0.393808 CACCCCCGACCGAATTTCAT 60.394 55.000 0.00 0.00 0.00 2.57
4649 4889 0.330267 ACCCCCGACCGAATTTCATT 59.670 50.000 0.00 0.00 0.00 2.57
4650 4890 1.021968 CCCCCGACCGAATTTCATTC 58.978 55.000 0.00 0.00 35.94 2.67
4687 4927 5.386060 CCTCCCCCTATTTTCATTCCTAAC 58.614 45.833 0.00 0.00 0.00 2.34
4705 5454 4.881850 CCTAACCTTCCATGTTACCATGTC 59.118 45.833 0.00 0.00 45.83 3.06
4716 5465 6.603201 CCATGTTACCATGTCCATTAAGTCTT 59.397 38.462 0.00 0.00 45.83 3.01
4724 5491 9.479549 ACCATGTCCATTAAGTCTTGATATTTT 57.520 29.630 0.00 0.00 0.00 1.82
4756 5524 4.221924 GGTGGGTAGGTGCATTTTGTATTT 59.778 41.667 0.00 0.00 0.00 1.40
4786 5554 5.523188 GCTATCATGCTATTAGTGCATCTCC 59.477 44.000 0.00 0.00 46.80 3.71
4793 5561 5.887598 TGCTATTAGTGCATCTCCAACAAAT 59.112 36.000 0.00 0.00 35.31 2.32
4797 5565 4.713824 AGTGCATCTCCAACAAATGATG 57.286 40.909 0.00 0.00 39.24 3.07
4803 5571 7.546667 GTGCATCTCCAACAAATGATGTAAAAT 59.453 33.333 0.00 0.00 42.99 1.82
4804 5572 7.546316 TGCATCTCCAACAAATGATGTAAAATG 59.454 33.333 0.00 0.00 42.99 2.32
4806 5574 7.537596 TCTCCAACAAATGATGTAAAATGGT 57.462 32.000 0.00 0.00 42.99 3.55
4807 5575 7.377398 TCTCCAACAAATGATGTAAAATGGTG 58.623 34.615 0.00 0.00 42.99 4.17
4810 5578 6.368516 CCAACAAATGATGTAAAATGGTGGTC 59.631 38.462 0.00 0.00 42.99 4.02
4811 5579 6.916360 ACAAATGATGTAAAATGGTGGTCT 57.084 33.333 0.00 0.00 41.63 3.85
4835 5603 3.739830 GCCCAAAAATTGTCGTTTGAGGT 60.740 43.478 2.56 0.00 36.96 3.85
4836 5604 3.801594 CCCAAAAATTGTCGTTTGAGGTG 59.198 43.478 2.56 0.00 36.96 4.00
4846 5614 1.045911 GTTTGAGGTGTTTGGGGCCA 61.046 55.000 4.39 0.00 0.00 5.36
4859 5627 0.824109 GGGGCCAAAAATACTGCTCC 59.176 55.000 4.39 0.00 37.17 4.70
4870 5638 7.412853 CAAAAATACTGCTCCAGATGATGTAC 58.587 38.462 0.00 0.00 35.18 2.90
4920 5727 1.128200 AACACCACTACTGACTGCCA 58.872 50.000 0.00 0.00 0.00 4.92
4925 5732 2.092646 ACCACTACTGACTGCCACAAAA 60.093 45.455 0.00 0.00 0.00 2.44
4927 5734 3.206150 CACTACTGACTGCCACAAAACT 58.794 45.455 0.00 0.00 0.00 2.66
4930 5737 5.295787 CACTACTGACTGCCACAAAACTAAA 59.704 40.000 0.00 0.00 0.00 1.85
4939 5746 3.068165 GCCACAAAACTAAAACTCAGCCT 59.932 43.478 0.00 0.00 0.00 4.58
4940 5747 4.793028 GCCACAAAACTAAAACTCAGCCTC 60.793 45.833 0.00 0.00 0.00 4.70
4941 5748 4.527564 CACAAAACTAAAACTCAGCCTCG 58.472 43.478 0.00 0.00 0.00 4.63
4942 5749 3.003378 ACAAAACTAAAACTCAGCCTCGC 59.997 43.478 0.00 0.00 0.00 5.03
4943 5750 1.429463 AACTAAAACTCAGCCTCGCG 58.571 50.000 0.00 0.00 0.00 5.87
4944 5751 0.389948 ACTAAAACTCAGCCTCGCGG 60.390 55.000 6.13 0.00 0.00 6.46
4945 5752 0.108804 CTAAAACTCAGCCTCGCGGA 60.109 55.000 6.13 0.00 0.00 5.54
4946 5753 0.319083 TAAAACTCAGCCTCGCGGAA 59.681 50.000 6.13 0.00 31.77 4.30
4947 5754 0.951040 AAAACTCAGCCTCGCGGAAG 60.951 55.000 6.13 0.00 31.77 3.46
4948 5755 2.100879 AAACTCAGCCTCGCGGAAGT 62.101 55.000 6.13 0.00 31.77 3.01
4949 5756 2.100879 AACTCAGCCTCGCGGAAGTT 62.101 55.000 6.13 4.67 31.77 2.66
4950 5757 1.374758 CTCAGCCTCGCGGAAGTTT 60.375 57.895 6.13 0.00 31.77 2.66
4951 5758 1.355066 CTCAGCCTCGCGGAAGTTTC 61.355 60.000 6.13 0.00 31.77 2.78
4952 5759 2.047179 AGCCTCGCGGAAGTTTCC 60.047 61.111 6.13 0.63 44.05 3.13
4953 5760 3.125573 GCCTCGCGGAAGTTTCCC 61.126 66.667 6.13 0.00 44.67 3.97
4954 5761 2.663196 CCTCGCGGAAGTTTCCCT 59.337 61.111 6.13 0.00 44.67 4.20
4955 5762 1.741770 CCTCGCGGAAGTTTCCCTG 60.742 63.158 6.13 0.00 44.67 4.45
4956 5763 2.358247 TCGCGGAAGTTTCCCTGC 60.358 61.111 6.13 3.47 44.67 4.85
4957 5764 3.431725 CGCGGAAGTTTCCCTGCC 61.432 66.667 0.00 0.00 44.67 4.85
4958 5765 2.282180 GCGGAAGTTTCCCTGCCA 60.282 61.111 5.36 0.00 44.67 4.92
4959 5766 2.626780 GCGGAAGTTTCCCTGCCAC 61.627 63.158 5.36 0.00 44.67 5.01
4960 5767 1.971695 CGGAAGTTTCCCTGCCACC 60.972 63.158 5.36 0.00 44.67 4.61
4961 5768 1.152830 GGAAGTTTCCCTGCCACCA 59.847 57.895 0.00 0.00 39.01 4.17
4962 5769 1.179174 GGAAGTTTCCCTGCCACCAC 61.179 60.000 0.00 0.00 39.01 4.16
4963 5770 0.467290 GAAGTTTCCCTGCCACCACA 60.467 55.000 0.00 0.00 0.00 4.17
4964 5771 0.755327 AAGTTTCCCTGCCACCACAC 60.755 55.000 0.00 0.00 0.00 3.82
4965 5772 2.203280 TTTCCCTGCCACCACACG 60.203 61.111 0.00 0.00 0.00 4.49
4966 5773 4.947147 TTCCCTGCCACCACACGC 62.947 66.667 0.00 0.00 0.00 5.34
4971 5778 4.634703 TGCCACCACACGCCGATT 62.635 61.111 0.00 0.00 0.00 3.34
4972 5779 3.799755 GCCACCACACGCCGATTC 61.800 66.667 0.00 0.00 0.00 2.52
4973 5780 3.124921 CCACCACACGCCGATTCC 61.125 66.667 0.00 0.00 0.00 3.01
4974 5781 3.487202 CACCACACGCCGATTCCG 61.487 66.667 0.00 0.00 0.00 4.30
4992 5799 2.356793 GGCTGGATCTCGCCATCG 60.357 66.667 17.31 0.00 45.59 3.84
4993 5800 2.419198 GCTGGATCTCGCCATCGT 59.581 61.111 0.00 0.00 37.30 3.73
4994 5801 1.227380 GCTGGATCTCGCCATCGTT 60.227 57.895 0.00 0.00 37.30 3.85
4995 5802 1.493950 GCTGGATCTCGCCATCGTTG 61.494 60.000 0.00 0.00 37.30 4.10
4996 5803 1.493950 CTGGATCTCGCCATCGTTGC 61.494 60.000 0.00 0.00 37.30 4.17
5003 5810 2.480555 GCCATCGTTGCGAGTTGG 59.519 61.111 6.76 6.76 39.91 3.77
5004 5811 2.325082 GCCATCGTTGCGAGTTGGT 61.325 57.895 11.28 0.00 38.03 3.67
5005 5812 1.787847 CCATCGTTGCGAGTTGGTC 59.212 57.895 3.74 0.00 39.91 4.02
5013 5820 2.651361 CGAGTTGGTCGTCTGCCT 59.349 61.111 0.00 0.00 44.20 4.75
5014 5821 1.444553 CGAGTTGGTCGTCTGCCTC 60.445 63.158 0.00 0.00 44.20 4.70
5015 5822 1.079750 GAGTTGGTCGTCTGCCTCC 60.080 63.158 0.00 0.00 0.00 4.30
5016 5823 2.432628 GTTGGTCGTCTGCCTCCG 60.433 66.667 0.00 0.00 0.00 4.63
5017 5824 3.691342 TTGGTCGTCTGCCTCCGG 61.691 66.667 0.00 0.00 0.00 5.14
5018 5825 4.671590 TGGTCGTCTGCCTCCGGA 62.672 66.667 2.93 2.93 0.00 5.14
5019 5826 4.131088 GGTCGTCTGCCTCCGGAC 62.131 72.222 0.00 0.00 42.71 4.79
5020 5827 4.131088 GTCGTCTGCCTCCGGACC 62.131 72.222 0.00 0.00 43.11 4.46
5021 5828 4.671590 TCGTCTGCCTCCGGACCA 62.672 66.667 0.00 0.00 43.11 4.02
5022 5829 3.691342 CGTCTGCCTCCGGACCAA 61.691 66.667 0.00 0.00 43.11 3.67
5023 5830 2.047179 GTCTGCCTCCGGACCAAC 60.047 66.667 0.00 0.00 40.73 3.77
5024 5831 3.319198 TCTGCCTCCGGACCAACC 61.319 66.667 0.00 0.00 0.00 3.77
5025 5832 3.636231 CTGCCTCCGGACCAACCA 61.636 66.667 0.00 0.00 38.90 3.67
5026 5833 3.612247 CTGCCTCCGGACCAACCAG 62.612 68.421 0.00 0.00 38.90 4.00
5028 5835 3.636231 CCTCCGGACCAACCAGCA 61.636 66.667 0.00 0.00 38.90 4.41
5029 5836 2.358737 CTCCGGACCAACCAGCAC 60.359 66.667 0.00 0.00 38.90 4.40
5030 5837 3.901797 CTCCGGACCAACCAGCACC 62.902 68.421 0.00 0.00 38.90 5.01
5052 5859 3.129300 CGCTCCGGATGCCTAGAA 58.871 61.111 3.57 0.00 0.00 2.10
5053 5860 1.300233 CGCTCCGGATGCCTAGAAC 60.300 63.158 3.57 0.00 0.00 3.01
5054 5861 1.823295 GCTCCGGATGCCTAGAACA 59.177 57.895 3.57 0.00 0.00 3.18
5055 5862 0.249657 GCTCCGGATGCCTAGAACAG 60.250 60.000 3.57 0.00 0.00 3.16
5056 5863 1.115467 CTCCGGATGCCTAGAACAGT 58.885 55.000 3.57 0.00 0.00 3.55
5057 5864 1.067821 CTCCGGATGCCTAGAACAGTC 59.932 57.143 3.57 0.00 0.00 3.51
5058 5865 0.105039 CCGGATGCCTAGAACAGTCC 59.895 60.000 0.00 0.00 0.00 3.85
5059 5866 0.105039 CGGATGCCTAGAACAGTCCC 59.895 60.000 0.00 0.00 0.00 4.46
5060 5867 0.470341 GGATGCCTAGAACAGTCCCC 59.530 60.000 0.00 0.00 0.00 4.81
5061 5868 0.105039 GATGCCTAGAACAGTCCCCG 59.895 60.000 0.00 0.00 0.00 5.73
5062 5869 0.617820 ATGCCTAGAACAGTCCCCGT 60.618 55.000 0.00 0.00 0.00 5.28
5063 5870 1.218316 GCCTAGAACAGTCCCCGTG 59.782 63.158 0.00 0.00 0.00 4.94
5064 5871 1.898154 CCTAGAACAGTCCCCGTGG 59.102 63.158 0.00 0.00 0.00 4.94
5065 5872 1.218316 CTAGAACAGTCCCCGTGGC 59.782 63.158 0.00 0.00 0.00 5.01
5066 5873 2.240162 CTAGAACAGTCCCCGTGGCC 62.240 65.000 0.00 0.00 0.00 5.36
5067 5874 3.948719 GAACAGTCCCCGTGGCCA 61.949 66.667 0.00 0.00 0.00 5.36
5068 5875 4.265056 AACAGTCCCCGTGGCCAC 62.265 66.667 26.78 26.78 0.00 5.01
5075 5882 4.715523 CCCGTGGCCACCGAACAT 62.716 66.667 29.95 0.00 0.00 2.71
5076 5883 3.124921 CCGTGGCCACCGAACATC 61.125 66.667 29.95 2.63 0.00 3.06
5077 5884 2.358125 CGTGGCCACCGAACATCA 60.358 61.111 29.95 0.00 0.00 3.07
5078 5885 2.677003 CGTGGCCACCGAACATCAC 61.677 63.158 29.95 0.98 0.00 3.06
5079 5886 1.302511 GTGGCCACCGAACATCACT 60.303 57.895 26.31 0.00 0.00 3.41
5080 5887 0.036765 GTGGCCACCGAACATCACTA 60.037 55.000 26.31 0.00 0.00 2.74
5081 5888 0.908910 TGGCCACCGAACATCACTAT 59.091 50.000 0.00 0.00 0.00 2.12
5082 5889 1.134521 TGGCCACCGAACATCACTATC 60.135 52.381 0.00 0.00 0.00 2.08
5083 5890 1.139058 GGCCACCGAACATCACTATCT 59.861 52.381 0.00 0.00 0.00 1.98
5084 5891 2.364324 GGCCACCGAACATCACTATCTA 59.636 50.000 0.00 0.00 0.00 1.98
5085 5892 3.381949 GCCACCGAACATCACTATCTAC 58.618 50.000 0.00 0.00 0.00 2.59
5086 5893 3.799232 GCCACCGAACATCACTATCTACC 60.799 52.174 0.00 0.00 0.00 3.18
5087 5894 3.550233 CCACCGAACATCACTATCTACCG 60.550 52.174 0.00 0.00 0.00 4.02
5088 5895 3.314357 CACCGAACATCACTATCTACCGA 59.686 47.826 0.00 0.00 0.00 4.69
5089 5896 3.949754 ACCGAACATCACTATCTACCGAA 59.050 43.478 0.00 0.00 0.00 4.30
5090 5897 4.201990 ACCGAACATCACTATCTACCGAAC 60.202 45.833 0.00 0.00 0.00 3.95
5091 5898 3.966844 CGAACATCACTATCTACCGAACG 59.033 47.826 0.00 0.00 0.00 3.95
5092 5899 4.260497 CGAACATCACTATCTACCGAACGA 60.260 45.833 0.00 0.00 0.00 3.85
5093 5900 4.548991 ACATCACTATCTACCGAACGAC 57.451 45.455 0.00 0.00 0.00 4.34
5094 5901 4.197750 ACATCACTATCTACCGAACGACT 58.802 43.478 0.00 0.00 0.00 4.18
5095 5902 4.035324 ACATCACTATCTACCGAACGACTG 59.965 45.833 0.00 0.00 0.00 3.51
5096 5903 3.865446 TCACTATCTACCGAACGACTGA 58.135 45.455 0.00 0.00 0.00 3.41
5097 5904 4.256110 TCACTATCTACCGAACGACTGAA 58.744 43.478 0.00 0.00 0.00 3.02
5098 5905 4.093998 TCACTATCTACCGAACGACTGAAC 59.906 45.833 0.00 0.00 0.00 3.18
5099 5906 2.935481 ATCTACCGAACGACTGAACC 57.065 50.000 0.00 0.00 0.00 3.62
5100 5907 0.518636 TCTACCGAACGACTGAACCG 59.481 55.000 0.00 0.00 0.00 4.44
5101 5908 0.518636 CTACCGAACGACTGAACCGA 59.481 55.000 0.00 0.00 0.00 4.69
5102 5909 1.131883 CTACCGAACGACTGAACCGAT 59.868 52.381 0.00 0.00 0.00 4.18
5103 5910 0.109412 ACCGAACGACTGAACCGATC 60.109 55.000 0.00 0.00 0.00 3.69
5104 5911 0.109458 CCGAACGACTGAACCGATCA 60.109 55.000 0.00 0.00 36.38 2.92
5111 5918 4.919653 TGAACCGATCAGCTCTGC 57.080 55.556 0.00 0.00 33.04 4.26
5112 5919 2.280835 TGAACCGATCAGCTCTGCT 58.719 52.632 0.00 0.00 40.77 4.24
5113 5920 1.474330 TGAACCGATCAGCTCTGCTA 58.526 50.000 0.00 0.00 36.40 3.49
5114 5921 2.034878 TGAACCGATCAGCTCTGCTAT 58.965 47.619 0.00 0.00 36.40 2.97
5115 5922 3.222603 TGAACCGATCAGCTCTGCTATA 58.777 45.455 0.00 0.00 36.40 1.31
5116 5923 3.829026 TGAACCGATCAGCTCTGCTATAT 59.171 43.478 0.00 0.00 36.40 0.86
5117 5924 4.082517 TGAACCGATCAGCTCTGCTATATC 60.083 45.833 0.00 0.00 36.40 1.63
5118 5925 3.425659 ACCGATCAGCTCTGCTATATCA 58.574 45.455 11.79 0.00 36.40 2.15
5119 5926 4.022603 ACCGATCAGCTCTGCTATATCAT 58.977 43.478 11.79 1.31 36.40 2.45
5120 5927 4.142204 ACCGATCAGCTCTGCTATATCATG 60.142 45.833 11.79 0.00 36.40 3.07
5121 5928 4.361420 CGATCAGCTCTGCTATATCATGG 58.639 47.826 11.79 0.00 36.40 3.66
5122 5929 4.097589 CGATCAGCTCTGCTATATCATGGA 59.902 45.833 11.79 0.00 36.40 3.41
5123 5930 5.221283 CGATCAGCTCTGCTATATCATGGAT 60.221 44.000 11.79 0.00 36.40 3.41
5124 5931 5.595257 TCAGCTCTGCTATATCATGGATC 57.405 43.478 0.00 0.00 36.40 3.36
5125 5932 5.270794 TCAGCTCTGCTATATCATGGATCT 58.729 41.667 0.00 0.00 36.40 2.75
5126 5933 5.127356 TCAGCTCTGCTATATCATGGATCTG 59.873 44.000 0.00 0.00 36.40 2.90
5127 5934 5.127356 CAGCTCTGCTATATCATGGATCTGA 59.873 44.000 0.00 0.00 36.40 3.27
5128 5935 5.361571 AGCTCTGCTATATCATGGATCTGAG 59.638 44.000 0.00 0.00 36.99 3.35
5129 5936 5.360429 GCTCTGCTATATCATGGATCTGAGA 59.640 44.000 0.00 0.00 0.00 3.27
5130 5937 6.460537 GCTCTGCTATATCATGGATCTGAGAG 60.461 46.154 0.00 0.00 0.00 3.20
5131 5938 6.729428 TCTGCTATATCATGGATCTGAGAGA 58.271 40.000 0.00 0.00 0.00 3.10
5132 5939 6.602803 TCTGCTATATCATGGATCTGAGAGAC 59.397 42.308 0.00 0.00 0.00 3.36
5133 5940 6.251471 TGCTATATCATGGATCTGAGAGACA 58.749 40.000 0.00 0.00 0.00 3.41
5134 5941 6.152492 TGCTATATCATGGATCTGAGAGACAC 59.848 42.308 0.00 0.00 0.00 3.67
5135 5942 6.152492 GCTATATCATGGATCTGAGAGACACA 59.848 42.308 0.00 0.00 0.00 3.72
5136 5943 7.147863 GCTATATCATGGATCTGAGAGACACAT 60.148 40.741 0.00 0.00 0.00 3.21
5137 5944 4.933505 TCATGGATCTGAGAGACACATC 57.066 45.455 0.00 0.00 0.00 3.06
5138 5945 3.317430 TCATGGATCTGAGAGACACATCG 59.683 47.826 0.00 0.00 0.00 3.84
5139 5946 3.004752 TGGATCTGAGAGACACATCGA 57.995 47.619 0.00 0.00 0.00 3.59
5140 5947 3.356290 TGGATCTGAGAGACACATCGAA 58.644 45.455 0.00 0.00 0.00 3.71
5141 5948 3.129462 TGGATCTGAGAGACACATCGAAC 59.871 47.826 0.00 0.00 0.00 3.95
5142 5949 3.380004 GGATCTGAGAGACACATCGAACT 59.620 47.826 0.00 0.00 0.00 3.01
5143 5950 4.576873 GGATCTGAGAGACACATCGAACTA 59.423 45.833 0.00 0.00 0.00 2.24
5144 5951 4.948608 TCTGAGAGACACATCGAACTAC 57.051 45.455 0.00 0.00 0.00 2.73
5145 5952 3.690139 TCTGAGAGACACATCGAACTACC 59.310 47.826 0.00 0.00 0.00 3.18
5146 5953 3.687125 TGAGAGACACATCGAACTACCT 58.313 45.455 0.00 0.00 0.00 3.08
5147 5954 3.690139 TGAGAGACACATCGAACTACCTC 59.310 47.826 0.00 0.00 0.00 3.85
5148 5955 3.942748 GAGAGACACATCGAACTACCTCT 59.057 47.826 8.95 8.95 33.02 3.69
5149 5956 5.100344 AGAGACACATCGAACTACCTCTA 57.900 43.478 7.83 0.00 0.00 2.43
5150 5957 5.498393 AGAGACACATCGAACTACCTCTAA 58.502 41.667 7.83 0.00 0.00 2.10
5151 5958 5.587043 AGAGACACATCGAACTACCTCTAAG 59.413 44.000 7.83 0.00 0.00 2.18
5152 5959 4.641094 AGACACATCGAACTACCTCTAAGG 59.359 45.833 0.00 0.00 42.49 2.69
5153 5960 3.700038 ACACATCGAACTACCTCTAAGGG 59.300 47.826 0.00 0.00 40.58 3.95
5154 5961 3.952323 CACATCGAACTACCTCTAAGGGA 59.048 47.826 0.00 0.00 40.58 4.20
5155 5962 3.952967 ACATCGAACTACCTCTAAGGGAC 59.047 47.826 0.00 0.00 40.58 4.46
5156 5963 3.726557 TCGAACTACCTCTAAGGGACA 57.273 47.619 0.00 0.00 40.58 4.02
5157 5964 4.038271 TCGAACTACCTCTAAGGGACAA 57.962 45.455 0.00 0.00 40.58 3.18
5158 5965 4.607239 TCGAACTACCTCTAAGGGACAAT 58.393 43.478 0.00 0.00 40.58 2.71
5159 5966 4.401519 TCGAACTACCTCTAAGGGACAATG 59.598 45.833 0.00 0.00 40.58 2.82
5160 5967 4.441634 CGAACTACCTCTAAGGGACAATGG 60.442 50.000 0.00 0.00 40.58 3.16
5161 5968 4.076175 ACTACCTCTAAGGGACAATGGT 57.924 45.455 0.00 0.00 40.58 3.55
5162 5969 4.436079 ACTACCTCTAAGGGACAATGGTT 58.564 43.478 0.00 0.00 40.58 3.67
5163 5970 5.596763 ACTACCTCTAAGGGACAATGGTTA 58.403 41.667 0.00 0.00 40.58 2.85
5164 5971 6.210522 ACTACCTCTAAGGGACAATGGTTAT 58.789 40.000 0.00 0.00 40.58 1.89
5165 5972 5.632034 ACCTCTAAGGGACAATGGTTATC 57.368 43.478 0.00 0.00 40.58 1.75
5166 5973 5.036916 ACCTCTAAGGGACAATGGTTATCA 58.963 41.667 0.00 0.00 40.58 2.15
5167 5974 5.672194 ACCTCTAAGGGACAATGGTTATCAT 59.328 40.000 0.00 0.00 40.58 2.45
5168 5975 6.000219 CCTCTAAGGGACAATGGTTATCATG 59.000 44.000 0.00 0.00 35.99 3.07
5169 5976 5.940617 TCTAAGGGACAATGGTTATCATGG 58.059 41.667 0.00 0.00 35.99 3.66
5170 5977 4.608170 AAGGGACAATGGTTATCATGGT 57.392 40.909 0.00 0.00 42.50 3.55
5171 5978 4.608170 AGGGACAATGGTTATCATGGTT 57.392 40.909 0.00 0.00 40.01 3.67
5172 5979 4.946646 AGGGACAATGGTTATCATGGTTT 58.053 39.130 0.00 0.00 40.01 3.27
5173 5980 5.341169 AGGGACAATGGTTATCATGGTTTT 58.659 37.500 0.00 0.00 40.01 2.43
5174 5981 5.784906 AGGGACAATGGTTATCATGGTTTTT 59.215 36.000 0.00 0.00 40.01 1.94
5175 5982 5.874261 GGGACAATGGTTATCATGGTTTTTG 59.126 40.000 0.00 0.00 40.01 2.44
5176 5983 6.463360 GGACAATGGTTATCATGGTTTTTGT 58.537 36.000 0.00 0.00 40.01 2.83
5177 5984 6.368516 GGACAATGGTTATCATGGTTTTTGTG 59.631 38.462 0.00 0.00 40.01 3.33
5178 5985 6.825610 ACAATGGTTATCATGGTTTTTGTGT 58.174 32.000 0.00 0.00 36.66 3.72
5179 5986 7.278875 ACAATGGTTATCATGGTTTTTGTGTT 58.721 30.769 0.00 0.00 36.66 3.32
5180 5987 7.226325 ACAATGGTTATCATGGTTTTTGTGTTG 59.774 33.333 0.00 0.00 36.66 3.33
5181 5988 6.471233 TGGTTATCATGGTTTTTGTGTTGA 57.529 33.333 0.00 0.00 0.00 3.18
5182 5989 6.511416 TGGTTATCATGGTTTTTGTGTTGAG 58.489 36.000 0.00 0.00 0.00 3.02
5183 5990 6.097554 TGGTTATCATGGTTTTTGTGTTGAGT 59.902 34.615 0.00 0.00 0.00 3.41
5184 5991 7.285629 TGGTTATCATGGTTTTTGTGTTGAGTA 59.714 33.333 0.00 0.00 0.00 2.59
5185 5992 8.138712 GGTTATCATGGTTTTTGTGTTGAGTAA 58.861 33.333 0.00 0.00 0.00 2.24
5186 5993 9.522804 GTTATCATGGTTTTTGTGTTGAGTAAA 57.477 29.630 0.00 0.00 0.00 2.01
5189 5996 9.912634 ATCATGGTTTTTGTGTTGAGTAAATAG 57.087 29.630 0.00 0.00 0.00 1.73
5190 5997 8.356657 TCATGGTTTTTGTGTTGAGTAAATAGG 58.643 33.333 0.00 0.00 0.00 2.57
5191 5998 6.508777 TGGTTTTTGTGTTGAGTAAATAGGC 58.491 36.000 0.00 0.00 0.00 3.93
5192 5999 6.096987 TGGTTTTTGTGTTGAGTAAATAGGCA 59.903 34.615 0.00 0.00 0.00 4.75
5193 6000 6.981559 GGTTTTTGTGTTGAGTAAATAGGCAA 59.018 34.615 0.00 0.00 0.00 4.52
5194 6001 7.655732 GGTTTTTGTGTTGAGTAAATAGGCAAT 59.344 33.333 0.00 0.00 0.00 3.56
5195 6002 9.040939 GTTTTTGTGTTGAGTAAATAGGCAATT 57.959 29.630 0.00 0.00 0.00 2.32
5196 6003 9.606631 TTTTTGTGTTGAGTAAATAGGCAATTT 57.393 25.926 2.34 2.34 40.87 1.82
5197 6004 8.810652 TTTGTGTTGAGTAAATAGGCAATTTC 57.189 30.769 0.00 0.00 38.71 2.17
5198 6005 7.759489 TGTGTTGAGTAAATAGGCAATTTCT 57.241 32.000 0.00 0.00 38.71 2.52
5199 6006 7.816640 TGTGTTGAGTAAATAGGCAATTTCTC 58.183 34.615 0.00 7.49 38.71 2.87
5200 6007 6.961554 GTGTTGAGTAAATAGGCAATTTCTCG 59.038 38.462 0.00 0.00 38.71 4.04
5201 6008 6.876789 TGTTGAGTAAATAGGCAATTTCTCGA 59.123 34.615 0.00 5.03 38.71 4.04
5202 6009 7.552687 TGTTGAGTAAATAGGCAATTTCTCGAT 59.447 33.333 0.00 0.00 38.71 3.59
5203 6010 8.398665 GTTGAGTAAATAGGCAATTTCTCGATT 58.601 33.333 0.00 0.00 38.71 3.34
5204 6011 9.607988 TTGAGTAAATAGGCAATTTCTCGATTA 57.392 29.630 0.00 0.00 38.71 1.75
5205 6012 9.607988 TGAGTAAATAGGCAATTTCTCGATTAA 57.392 29.630 0.00 0.00 38.71 1.40
5214 6021 8.912988 AGGCAATTTCTCGATTAAATTAATCCA 58.087 29.630 17.23 6.53 41.10 3.41
5215 6022 8.968242 GGCAATTTCTCGATTAAATTAATCCAC 58.032 33.333 17.23 0.00 41.10 4.02
5216 6023 8.682016 GCAATTTCTCGATTAAATTAATCCACG 58.318 33.333 17.23 8.92 41.10 4.94
5217 6024 9.929722 CAATTTCTCGATTAAATTAATCCACGA 57.070 29.630 17.23 12.07 41.10 4.35
5219 6026 8.712285 TTTCTCGATTAAATTAATCCACGAGT 57.288 30.769 22.80 0.00 41.10 4.18
5220 6027 9.806203 TTTCTCGATTAAATTAATCCACGAGTA 57.194 29.630 22.80 16.29 41.10 2.59
5221 6028 9.806203 TTCTCGATTAAATTAATCCACGAGTAA 57.194 29.630 22.80 16.72 41.10 2.24
5222 6029 9.806203 TCTCGATTAAATTAATCCACGAGTAAA 57.194 29.630 22.80 10.58 41.10 2.01
5230 6037 7.948278 ATTAATCCACGAGTAAATCACTAGC 57.052 36.000 0.00 0.00 37.72 3.42
5231 6038 5.339008 AATCCACGAGTAAATCACTAGCA 57.661 39.130 0.00 0.00 37.72 3.49
5232 6039 5.537300 ATCCACGAGTAAATCACTAGCAT 57.463 39.130 0.00 0.00 37.72 3.79
5233 6040 4.682787 TCCACGAGTAAATCACTAGCATG 58.317 43.478 0.00 0.00 37.72 4.06
5234 6041 3.804325 CCACGAGTAAATCACTAGCATGG 59.196 47.826 0.00 0.00 37.72 3.66
5235 6042 3.246226 CACGAGTAAATCACTAGCATGGC 59.754 47.826 0.00 0.00 37.72 4.40
5236 6043 3.118775 ACGAGTAAATCACTAGCATGGCA 60.119 43.478 0.00 0.00 37.72 4.92
5237 6044 4.060900 CGAGTAAATCACTAGCATGGCAT 58.939 43.478 0.00 0.00 37.72 4.40
5238 6045 4.512944 CGAGTAAATCACTAGCATGGCATT 59.487 41.667 0.00 0.00 37.72 3.56
5239 6046 5.559608 CGAGTAAATCACTAGCATGGCATTG 60.560 44.000 0.00 0.00 37.72 2.82
5240 6047 5.439721 AGTAAATCACTAGCATGGCATTGA 58.560 37.500 0.00 0.00 34.98 2.57
5241 6048 4.644103 AAATCACTAGCATGGCATTGAC 57.356 40.909 0.00 0.00 0.00 3.18
5242 6049 2.785540 TCACTAGCATGGCATTGACA 57.214 45.000 0.00 0.00 0.00 3.58
5243 6050 2.358957 TCACTAGCATGGCATTGACAC 58.641 47.619 0.00 0.00 0.00 3.67
5244 6051 2.086094 CACTAGCATGGCATTGACACA 58.914 47.619 0.00 0.00 0.00 3.72
5245 6052 2.488937 CACTAGCATGGCATTGACACAA 59.511 45.455 0.00 0.00 0.00 3.33
5246 6053 3.057386 CACTAGCATGGCATTGACACAAA 60.057 43.478 0.00 0.00 0.00 2.83
5247 6054 3.765511 ACTAGCATGGCATTGACACAAAT 59.234 39.130 0.00 0.00 0.00 2.32
5248 6055 4.949238 ACTAGCATGGCATTGACACAAATA 59.051 37.500 0.00 0.00 0.00 1.40
5249 6056 4.804868 AGCATGGCATTGACACAAATAA 57.195 36.364 0.00 0.00 0.00 1.40
5250 6057 5.149973 AGCATGGCATTGACACAAATAAA 57.850 34.783 0.00 0.00 0.00 1.40
5251 6058 4.931002 AGCATGGCATTGACACAAATAAAC 59.069 37.500 0.00 0.00 0.00 2.01
5252 6059 4.201608 GCATGGCATTGACACAAATAAACG 60.202 41.667 0.00 0.00 0.00 3.60
5253 6060 3.312828 TGGCATTGACACAAATAAACGC 58.687 40.909 0.00 0.00 0.00 4.84
5254 6061 3.243535 TGGCATTGACACAAATAAACGCA 60.244 39.130 0.00 0.00 0.00 5.24
5255 6062 3.925913 GGCATTGACACAAATAAACGCAT 59.074 39.130 0.00 0.00 0.00 4.73
5256 6063 5.098893 GGCATTGACACAAATAAACGCATA 58.901 37.500 0.00 0.00 0.00 3.14
5257 6064 5.004345 GGCATTGACACAAATAAACGCATAC 59.996 40.000 0.00 0.00 0.00 2.39
5258 6065 5.799936 GCATTGACACAAATAAACGCATACT 59.200 36.000 0.00 0.00 0.00 2.12
5259 6066 6.237279 GCATTGACACAAATAAACGCATACTG 60.237 38.462 0.00 0.00 0.00 2.74
5260 6067 6.546972 TTGACACAAATAAACGCATACTGA 57.453 33.333 0.00 0.00 0.00 3.41
5261 6068 6.735678 TGACACAAATAAACGCATACTGAT 57.264 33.333 0.00 0.00 0.00 2.90
5262 6069 7.835634 TGACACAAATAAACGCATACTGATA 57.164 32.000 0.00 0.00 0.00 2.15
5263 6070 8.432110 TGACACAAATAAACGCATACTGATAT 57.568 30.769 0.00 0.00 0.00 1.63
5264 6071 8.888716 TGACACAAATAAACGCATACTGATATT 58.111 29.630 0.00 0.00 0.00 1.28
5265 6072 9.716507 GACACAAATAAACGCATACTGATATTT 57.283 29.630 0.00 0.00 0.00 1.40
5266 6073 9.716507 ACACAAATAAACGCATACTGATATTTC 57.283 29.630 0.00 0.00 0.00 2.17
5267 6074 9.715123 CACAAATAAACGCATACTGATATTTCA 57.285 29.630 0.00 0.00 0.00 2.69
5279 6086 5.556355 CTGATATTTCAGTCAAGCAAGCA 57.444 39.130 5.10 0.00 43.73 3.91
5280 6087 5.300969 TGATATTTCAGTCAAGCAAGCAC 57.699 39.130 0.00 0.00 0.00 4.40
5281 6088 4.761227 TGATATTTCAGTCAAGCAAGCACA 59.239 37.500 0.00 0.00 0.00 4.57
5282 6089 5.416639 TGATATTTCAGTCAAGCAAGCACAT 59.583 36.000 0.00 0.00 0.00 3.21
5283 6090 6.598850 TGATATTTCAGTCAAGCAAGCACATA 59.401 34.615 0.00 0.00 0.00 2.29
5284 6091 4.488126 TTTCAGTCAAGCAAGCACATAC 57.512 40.909 0.00 0.00 0.00 2.39
5285 6092 3.407424 TCAGTCAAGCAAGCACATACT 57.593 42.857 0.00 0.00 0.00 2.12
5286 6093 4.535526 TCAGTCAAGCAAGCACATACTA 57.464 40.909 0.00 0.00 0.00 1.82
5287 6094 4.245660 TCAGTCAAGCAAGCACATACTAC 58.754 43.478 0.00 0.00 0.00 2.73
5288 6095 3.061295 CAGTCAAGCAAGCACATACTACG 59.939 47.826 0.00 0.00 0.00 3.51
5289 6096 1.999735 TCAAGCAAGCACATACTACGC 59.000 47.619 0.00 0.00 0.00 4.42
5290 6097 2.002586 CAAGCAAGCACATACTACGCT 58.997 47.619 0.00 0.00 37.68 5.07
5291 6098 3.119280 TCAAGCAAGCACATACTACGCTA 60.119 43.478 0.00 0.00 34.11 4.26
5292 6099 3.520290 AGCAAGCACATACTACGCTAA 57.480 42.857 0.00 0.00 34.11 3.09
5293 6100 3.448686 AGCAAGCACATACTACGCTAAG 58.551 45.455 0.00 0.00 34.11 2.18
5294 6101 3.119101 AGCAAGCACATACTACGCTAAGT 60.119 43.478 0.00 0.00 34.11 2.24
5295 6102 3.000322 GCAAGCACATACTACGCTAAGTG 60.000 47.826 0.00 0.00 34.11 3.16
5299 6106 4.028852 CACATACTACGCTAAGTGCAGA 57.971 45.455 0.00 0.00 43.06 4.26
5300 6107 4.421058 CACATACTACGCTAAGTGCAGAA 58.579 43.478 0.00 0.00 43.06 3.02
5301 6108 4.862574 CACATACTACGCTAAGTGCAGAAA 59.137 41.667 0.00 0.00 43.06 2.52
5302 6109 5.004821 CACATACTACGCTAAGTGCAGAAAG 59.995 44.000 0.00 0.00 43.06 2.62
5303 6110 3.936372 ACTACGCTAAGTGCAGAAAGA 57.064 42.857 0.00 0.00 43.06 2.52
5304 6111 4.457834 ACTACGCTAAGTGCAGAAAGAT 57.542 40.909 0.00 0.00 43.06 2.40
5305 6112 4.425520 ACTACGCTAAGTGCAGAAAGATC 58.574 43.478 0.00 0.00 43.06 2.75
5306 6113 3.601443 ACGCTAAGTGCAGAAAGATCT 57.399 42.857 0.00 0.00 43.06 2.75
5307 6114 4.720649 ACGCTAAGTGCAGAAAGATCTA 57.279 40.909 0.00 0.00 43.06 1.98
5308 6115 4.425520 ACGCTAAGTGCAGAAAGATCTAC 58.574 43.478 0.00 0.00 43.06 2.59
5309 6116 3.483922 CGCTAAGTGCAGAAAGATCTACG 59.516 47.826 0.00 0.00 43.06 3.51
5310 6117 4.425520 GCTAAGTGCAGAAAGATCTACGT 58.574 43.478 0.00 0.00 42.31 3.57
5311 6118 5.579718 GCTAAGTGCAGAAAGATCTACGTA 58.420 41.667 0.00 0.00 42.31 3.57
5312 6119 6.210078 GCTAAGTGCAGAAAGATCTACGTAT 58.790 40.000 0.00 0.00 42.31 3.06
5313 6120 7.361127 GCTAAGTGCAGAAAGATCTACGTATA 58.639 38.462 0.00 0.00 42.31 1.47
5314 6121 7.861372 GCTAAGTGCAGAAAGATCTACGTATAA 59.139 37.037 0.00 0.00 42.31 0.98
5315 6122 7.988904 AAGTGCAGAAAGATCTACGTATAAC 57.011 36.000 0.00 0.00 33.50 1.89
5316 6123 6.200100 AGTGCAGAAAGATCTACGTATAACG 58.800 40.000 0.00 0.00 39.99 3.18
5317 6124 4.974275 TGCAGAAAGATCTACGTATAACGC 59.026 41.667 0.00 0.00 38.47 4.84
5318 6125 5.213675 GCAGAAAGATCTACGTATAACGCT 58.786 41.667 0.00 0.00 38.47 5.07
5319 6126 6.017687 TGCAGAAAGATCTACGTATAACGCTA 60.018 38.462 0.00 0.00 38.47 4.26
5320 6127 6.520447 GCAGAAAGATCTACGTATAACGCTAG 59.480 42.308 0.00 1.90 38.47 3.42
5321 6128 6.520447 CAGAAAGATCTACGTATAACGCTAGC 59.480 42.308 4.06 4.06 38.47 3.42
5322 6129 7.781484 CAGAAAGATCTACGTATAACGCTAGCA 60.781 40.741 16.45 0.00 38.47 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 84 3.492102 AGCTCTTGAACTAAAGCCACA 57.508 42.857 0.00 0.00 35.32 4.17
96 101 4.402474 AGAAAAAGTGTTGTGGCTTTAGCT 59.598 37.500 1.26 0.00 41.70 3.32
97 102 4.504097 CAGAAAAAGTGTTGTGGCTTTAGC 59.496 41.667 0.00 0.00 34.26 3.09
108 128 3.821033 CCTTCCGATCCAGAAAAAGTGTT 59.179 43.478 0.00 0.00 0.00 3.32
118 140 1.144936 GGCACTCCTTCCGATCCAG 59.855 63.158 0.00 0.00 0.00 3.86
128 150 2.557452 CCCTTGGTAAAATGGCACTCCT 60.557 50.000 0.00 0.00 0.00 3.69
147 169 2.358898 GTGGTGATATTGTGTGCATCCC 59.641 50.000 0.00 0.00 0.00 3.85
148 170 2.032054 CGTGGTGATATTGTGTGCATCC 59.968 50.000 0.00 0.00 0.00 3.51
157 179 1.655484 TGCAGCTCGTGGTGATATTG 58.345 50.000 19.85 0.00 43.76 1.90
180 202 3.690460 AGTCTCCCATGTTGGTGATTTC 58.310 45.455 0.00 0.00 35.17 2.17
199 221 4.469657 CTCTGAGCTAATCTGGTCCTAGT 58.530 47.826 0.00 0.00 33.93 2.57
206 228 1.138464 TGCTGCTCTGAGCTAATCTGG 59.862 52.381 28.04 11.55 42.97 3.86
249 271 2.919229 CTGCAGCGGTGAAATTCATTTC 59.081 45.455 20.69 5.46 44.83 2.17
274 296 2.093288 TGATTGGCTTCAGGAGTAGCAG 60.093 50.000 0.00 0.00 39.64 4.24
359 381 4.907034 CGATCGGTGGCGAGGACG 62.907 72.222 7.38 0.00 42.93 4.79
389 411 1.067295 TTTGGTGCTGACTCAGGGAT 58.933 50.000 8.17 0.00 31.21 3.85
404 426 1.606224 GCTGATTGGTGCTGGTTTTGG 60.606 52.381 0.00 0.00 0.00 3.28
413 435 0.895100 TCTGGGTTGCTGATTGGTGC 60.895 55.000 0.00 0.00 0.00 5.01
426 448 0.962356 CTGCTTGGCGATTTCTGGGT 60.962 55.000 0.00 0.00 0.00 4.51
479 503 2.442272 GAGGAGCAGCGGGAGGTA 60.442 66.667 0.00 0.00 39.46 3.08
691 732 2.046892 TCTGCTTCCGCTTCTGGC 60.047 61.111 0.00 0.00 36.97 4.85
821 869 0.036388 ATCTGACCACGAACGCCATT 60.036 50.000 0.00 0.00 0.00 3.16
850 898 1.470890 GTTCCCGCGGATCAAAATTCA 59.529 47.619 30.73 0.00 0.00 2.57
1146 1214 1.592223 CTTCCGCTTCTTCTCCGGT 59.408 57.895 0.00 0.00 42.48 5.28
1252 1320 0.825010 AGCACCAAACAGGCAGGAAG 60.825 55.000 0.00 0.00 43.14 3.46
1287 1355 0.958091 CAAGCGGGTTCAAATCACCA 59.042 50.000 0.00 0.00 35.80 4.17
1289 1357 3.792716 CCAAGCGGGTTCAAATCAC 57.207 52.632 0.00 0.00 0.00 3.06
1303 1371 4.311816 ACATCTGCAGAAACAAACCAAG 57.688 40.909 22.50 3.42 0.00 3.61
1305 1373 3.446873 ACAACATCTGCAGAAACAAACCA 59.553 39.130 22.50 0.00 0.00 3.67
1371 1439 1.304547 CCTCCACAGACTCCTCCGT 60.305 63.158 0.00 0.00 0.00 4.69
1439 1507 1.395826 CCTCGATTTCCCTCTCGGCT 61.396 60.000 0.00 0.00 35.64 5.52
1477 1545 6.726379 TGAACCCTGATTATGAACATTGGTA 58.274 36.000 0.00 0.00 0.00 3.25
1488 1556 9.435570 ACTACATTACTACTGAACCCTGATTAT 57.564 33.333 0.00 0.00 0.00 1.28
1545 1613 7.331440 CCTATGATGCTTACTAATTCAGCTCAG 59.669 40.741 0.00 0.00 34.42 3.35
1631 1700 0.389817 TCAAGACCGTGCTGGAATCG 60.390 55.000 2.38 0.00 42.00 3.34
1736 1806 3.430374 GCGGCTCTCTAGAAACCAATACA 60.430 47.826 0.00 0.00 0.00 2.29
1742 1812 0.466124 ATGGCGGCTCTCTAGAAACC 59.534 55.000 11.43 0.00 0.00 3.27
1777 1847 1.006832 GTCCCGAAATGTGGATGTCG 58.993 55.000 0.00 0.00 38.82 4.35
2010 2139 7.117523 CAGAGTAAAAGATCACTCACTGAAAGG 59.882 40.741 12.09 0.00 42.99 3.11
2047 2177 1.322442 GTTTCCATGCATAGGGGCTC 58.678 55.000 0.00 0.00 34.04 4.70
2048 2178 0.630673 TGTTTCCATGCATAGGGGCT 59.369 50.000 0.00 0.00 34.04 5.19
2049 2179 1.708341 ATGTTTCCATGCATAGGGGC 58.292 50.000 0.00 0.00 0.00 5.80
2099 2233 1.305623 CTCCCTGCCCTGAAGCAAT 59.694 57.895 0.00 0.00 43.52 3.56
2135 2269 0.536006 GTGTCTTGCCAGAGCCTGTT 60.536 55.000 0.00 0.00 38.69 3.16
2227 2361 7.121382 ACTCATCATAAATCCTGTCCAACAAT 58.879 34.615 0.00 0.00 0.00 2.71
2465 2599 5.133941 AGGTCTCTCTTTCGTATAGCATGA 58.866 41.667 0.00 0.00 0.00 3.07
2778 2919 6.757897 TGCAGGTTATTCAGTATTTCTTGG 57.242 37.500 0.00 0.00 0.00 3.61
3054 3206 7.383029 GCTTTGACAATTGAATCAATCACTTCA 59.617 33.333 13.59 6.77 37.92 3.02
3096 3248 7.270579 GTGGCACTAAACAAAGAACGAATTATC 59.729 37.037 11.13 0.00 0.00 1.75
3412 3565 3.875134 ACAGACCAGTTCTAAAACAACCG 59.125 43.478 0.00 0.00 37.88 4.44
3413 3566 6.018180 CAGTACAGACCAGTTCTAAAACAACC 60.018 42.308 0.00 0.00 37.88 3.77
3516 3671 6.037786 TGCAAGTAGTGAGTTTACAGCTAT 57.962 37.500 0.00 0.00 0.00 2.97
3547 3702 6.348621 ACAAATGTGCAGTTCAACATTTTC 57.651 33.333 10.24 0.00 39.77 2.29
3600 3762 9.221775 GACAATACAACAACAGTAAGTTTCAAG 57.778 33.333 0.00 0.00 38.74 3.02
3727 3890 6.422100 CAGTAAGGTCTCCATGAATTACATCG 59.578 42.308 0.00 0.00 37.07 3.84
3829 3992 6.237942 CGAGCCTGATGTCAACAGTATTAAAG 60.238 42.308 9.06 0.00 34.04 1.85
3996 4159 1.878522 CGCGGACTCAGGGAAATCG 60.879 63.158 0.00 0.00 0.00 3.34
4340 4506 7.095355 ACGTGTCATCTCTACAAAATTGTTACC 60.095 37.037 3.85 0.00 42.35 2.85
4428 4594 1.068588 TGCATACGCCAGTATCAGGTC 59.931 52.381 0.00 0.00 41.33 3.85
4437 4603 2.313172 GCTCGGATGCATACGCCAG 61.313 63.158 26.78 19.85 37.32 4.85
4438 4604 2.280119 GCTCGGATGCATACGCCA 60.280 61.111 26.78 9.59 37.32 5.69
4460 4626 1.696063 ACTGCAGCAGGTCACAAAAT 58.304 45.000 26.38 0.00 35.51 1.82
4469 4635 0.953727 TGCACTAAAACTGCAGCAGG 59.046 50.000 26.38 10.52 39.76 4.85
4475 4641 2.288395 ACAGCCAATGCACTAAAACTGC 60.288 45.455 0.00 0.00 41.13 4.40
4533 4699 5.868454 TGTCCTCTGATGTTGAAGAATCAA 58.132 37.500 0.00 0.00 43.18 2.57
4589 4829 2.572191 TCCGGTAAACATCTGTAGCG 57.428 50.000 0.00 0.00 40.08 4.26
4590 4830 4.595198 GTTTCCGGTAAACATCTGTAGC 57.405 45.455 18.66 0.00 45.72 3.58
4607 4847 2.640332 AGGGAGGAGAGTTGGAAGTTTC 59.360 50.000 0.00 0.00 0.00 2.78
4608 4848 2.640332 GAGGGAGGAGAGTTGGAAGTTT 59.360 50.000 0.00 0.00 0.00 2.66
4609 4849 2.261729 GAGGGAGGAGAGTTGGAAGTT 58.738 52.381 0.00 0.00 0.00 2.66
4610 4850 1.150135 TGAGGGAGGAGAGTTGGAAGT 59.850 52.381 0.00 0.00 0.00 3.01
4611 4851 1.552792 GTGAGGGAGGAGAGTTGGAAG 59.447 57.143 0.00 0.00 0.00 3.46
4612 4852 1.645710 GTGAGGGAGGAGAGTTGGAA 58.354 55.000 0.00 0.00 0.00 3.53
4613 4853 0.252284 GGTGAGGGAGGAGAGTTGGA 60.252 60.000 0.00 0.00 0.00 3.53
4614 4854 1.268283 GGGTGAGGGAGGAGAGTTGG 61.268 65.000 0.00 0.00 0.00 3.77
4615 4855 1.268283 GGGGTGAGGGAGGAGAGTTG 61.268 65.000 0.00 0.00 0.00 3.16
4616 4856 1.081277 GGGGTGAGGGAGGAGAGTT 59.919 63.158 0.00 0.00 0.00 3.01
4617 4857 2.781406 GGGGTGAGGGAGGAGAGT 59.219 66.667 0.00 0.00 0.00 3.24
4618 4858 2.041405 GGGGGTGAGGGAGGAGAG 60.041 72.222 0.00 0.00 0.00 3.20
4619 4859 4.075793 CGGGGGTGAGGGAGGAGA 62.076 72.222 0.00 0.00 0.00 3.71
4620 4860 4.075793 TCGGGGGTGAGGGAGGAG 62.076 72.222 0.00 0.00 0.00 3.69
4621 4861 4.393778 GTCGGGGGTGAGGGAGGA 62.394 72.222 0.00 0.00 0.00 3.71
4626 4866 2.193087 AAATTCGGTCGGGGGTGAGG 62.193 60.000 0.00 0.00 0.00 3.86
4627 4867 0.743345 GAAATTCGGTCGGGGGTGAG 60.743 60.000 0.00 0.00 0.00 3.51
4628 4868 1.297364 GAAATTCGGTCGGGGGTGA 59.703 57.895 0.00 0.00 0.00 4.02
4629 4869 0.393808 ATGAAATTCGGTCGGGGGTG 60.394 55.000 0.00 0.00 0.00 4.61
4630 4870 0.330267 AATGAAATTCGGTCGGGGGT 59.670 50.000 0.00 0.00 0.00 4.95
4631 4871 1.021968 GAATGAAATTCGGTCGGGGG 58.978 55.000 0.00 0.00 44.37 5.40
4641 4881 2.590704 GGGCCACCCGAATGAAATT 58.409 52.632 4.39 0.00 33.91 1.82
4642 4882 4.355151 GGGCCACCCGAATGAAAT 57.645 55.556 4.39 0.00 32.13 2.17
4724 5491 3.138653 TGCACCTACCCACCTAAAGAAAA 59.861 43.478 0.00 0.00 0.00 2.29
4728 5495 3.366052 AATGCACCTACCCACCTAAAG 57.634 47.619 0.00 0.00 0.00 1.85
4756 5524 7.558604 TGCACTAATAGCATGATAGCATATCA 58.441 34.615 0.00 2.18 37.02 2.15
4772 5540 7.557358 ACATCATTTGTTGGAGATGCACTAATA 59.443 33.333 0.00 0.00 41.08 0.98
4778 5546 6.587206 TTTACATCATTTGTTGGAGATGCA 57.413 33.333 0.00 0.00 41.08 3.96
4782 5550 7.377398 CACCATTTTACATCATTTGTTGGAGA 58.623 34.615 0.00 0.00 39.87 3.71
4786 5554 7.153985 AGACCACCATTTTACATCATTTGTTG 58.846 34.615 0.00 0.00 39.87 3.33
4793 5561 3.509575 GGCAAGACCACCATTTTACATCA 59.490 43.478 0.00 0.00 38.86 3.07
4797 5565 2.243810 TGGGCAAGACCACCATTTTAC 58.756 47.619 0.00 0.00 42.05 2.01
4803 5571 1.799933 ATTTTTGGGCAAGACCACCA 58.200 45.000 0.00 0.00 41.03 4.17
4804 5572 2.158827 ACAATTTTTGGGCAAGACCACC 60.159 45.455 0.00 0.00 41.03 4.61
4806 5574 2.223923 CGACAATTTTTGGGCAAGACCA 60.224 45.455 0.00 0.00 42.05 4.02
4807 5575 2.223947 ACGACAATTTTTGGGCAAGACC 60.224 45.455 0.00 0.00 37.93 3.85
4810 5578 3.868077 TCAAACGACAATTTTTGGGCAAG 59.132 39.130 0.00 0.00 34.14 4.01
4811 5579 3.861840 TCAAACGACAATTTTTGGGCAA 58.138 36.364 0.00 0.00 34.14 4.52
4835 5603 2.224402 GCAGTATTTTTGGCCCCAAACA 60.224 45.455 11.80 6.54 44.39 2.83
4836 5604 2.038426 AGCAGTATTTTTGGCCCCAAAC 59.962 45.455 11.80 2.13 44.39 2.93
4846 5614 6.543831 GGTACATCATCTGGAGCAGTATTTTT 59.456 38.462 0.00 0.00 36.14 1.94
4859 5627 6.828273 TGGACCAAATAAAGGTACATCATCTG 59.172 38.462 0.00 0.00 44.97 2.90
4870 5638 4.202202 TGCAACACTTGGACCAAATAAAGG 60.202 41.667 8.59 0.00 0.00 3.11
4910 5717 4.705023 AGTTTTAGTTTTGTGGCAGTCAGT 59.295 37.500 0.00 0.00 0.00 3.41
4912 5719 4.702612 TGAGTTTTAGTTTTGTGGCAGTCA 59.297 37.500 0.00 0.00 0.00 3.41
4920 5727 3.003378 GCGAGGCTGAGTTTTAGTTTTGT 59.997 43.478 0.00 0.00 0.00 2.83
4925 5732 3.123674 CGCGAGGCTGAGTTTTAGT 57.876 52.632 0.00 0.00 0.00 2.24
4943 5750 1.152830 TGGTGGCAGGGAAACTTCC 59.847 57.895 0.00 0.00 46.82 3.46
4944 5751 0.467290 TGTGGTGGCAGGGAAACTTC 60.467 55.000 0.00 0.00 0.00 3.01
4945 5752 0.755327 GTGTGGTGGCAGGGAAACTT 60.755 55.000 0.00 0.00 0.00 2.66
4946 5753 1.152756 GTGTGGTGGCAGGGAAACT 60.153 57.895 0.00 0.00 0.00 2.66
4947 5754 2.551912 CGTGTGGTGGCAGGGAAAC 61.552 63.158 0.00 0.00 0.00 2.78
4948 5755 2.203280 CGTGTGGTGGCAGGGAAA 60.203 61.111 0.00 0.00 0.00 3.13
4949 5756 4.947147 GCGTGTGGTGGCAGGGAA 62.947 66.667 0.00 0.00 0.00 3.97
4954 5761 4.634703 AATCGGCGTGTGGTGGCA 62.635 61.111 6.85 0.00 0.00 4.92
4955 5762 3.799755 GAATCGGCGTGTGGTGGC 61.800 66.667 6.85 0.00 0.00 5.01
4956 5763 3.124921 GGAATCGGCGTGTGGTGG 61.125 66.667 6.85 0.00 0.00 4.61
4957 5764 3.487202 CGGAATCGGCGTGTGGTG 61.487 66.667 6.85 0.00 0.00 4.17
4976 5783 1.227380 AACGATGGCGAGATCCAGC 60.227 57.895 0.00 1.72 39.89 4.85
4977 5784 1.493950 GCAACGATGGCGAGATCCAG 61.494 60.000 0.00 0.00 39.89 3.86
4978 5785 1.521457 GCAACGATGGCGAGATCCA 60.521 57.895 0.00 0.00 41.64 3.41
4979 5786 3.324035 GCAACGATGGCGAGATCC 58.676 61.111 0.00 0.00 41.64 3.36
4986 5793 2.240612 GACCAACTCGCAACGATGGC 62.241 60.000 9.02 0.71 38.95 4.40
4987 5794 1.787847 GACCAACTCGCAACGATGG 59.212 57.895 7.82 7.82 40.53 3.51
4988 5795 1.416049 CGACCAACTCGCAACGATG 59.584 57.895 0.00 0.00 35.06 3.84
4989 5796 3.856508 CGACCAACTCGCAACGAT 58.143 55.556 0.00 0.00 35.06 3.73
4997 5804 1.079750 GGAGGCAGACGACCAACTC 60.080 63.158 0.00 0.00 0.00 3.01
4998 5805 2.932234 CGGAGGCAGACGACCAACT 61.932 63.158 0.00 0.00 0.00 3.16
4999 5806 2.432628 CGGAGGCAGACGACCAAC 60.433 66.667 0.00 0.00 0.00 3.77
5000 5807 3.691342 CCGGAGGCAGACGACCAA 61.691 66.667 0.00 0.00 46.14 3.67
5012 5819 2.358737 GTGCTGGTTGGTCCGGAG 60.359 66.667 3.06 0.00 45.09 4.63
5013 5820 3.948719 GGTGCTGGTTGGTCCGGA 61.949 66.667 0.00 0.00 45.09 5.14
5035 5842 1.300233 GTTCTAGGCATCCGGAGCG 60.300 63.158 11.34 4.56 0.00 5.03
5036 5843 0.249657 CTGTTCTAGGCATCCGGAGC 60.250 60.000 11.34 13.68 0.00 4.70
5037 5844 1.067821 GACTGTTCTAGGCATCCGGAG 59.932 57.143 11.34 3.17 33.23 4.63
5038 5845 1.112113 GACTGTTCTAGGCATCCGGA 58.888 55.000 6.61 6.61 33.23 5.14
5039 5846 0.105039 GGACTGTTCTAGGCATCCGG 59.895 60.000 0.00 0.00 35.47 5.14
5040 5847 0.105039 GGGACTGTTCTAGGCATCCG 59.895 60.000 0.00 0.00 35.47 4.18
5041 5848 0.470341 GGGGACTGTTCTAGGCATCC 59.530 60.000 0.00 0.32 35.47 3.51
5042 5849 0.105039 CGGGGACTGTTCTAGGCATC 59.895 60.000 0.00 0.00 35.47 3.91
5043 5850 2.212327 CGGGGACTGTTCTAGGCAT 58.788 57.895 0.00 0.00 35.47 4.40
5044 5851 3.708210 CGGGGACTGTTCTAGGCA 58.292 61.111 0.00 0.00 35.47 4.75
5058 5865 4.715523 ATGTTCGGTGGCCACGGG 62.716 66.667 34.99 26.38 33.17 5.28
5059 5866 3.124921 GATGTTCGGTGGCCACGG 61.125 66.667 31.84 31.84 0.00 4.94
5060 5867 2.358125 TGATGTTCGGTGGCCACG 60.358 61.111 29.08 22.97 0.00 4.94
5061 5868 0.036765 TAGTGATGTTCGGTGGCCAC 60.037 55.000 28.57 28.57 0.00 5.01
5062 5869 0.908910 ATAGTGATGTTCGGTGGCCA 59.091 50.000 0.00 0.00 0.00 5.36
5063 5870 1.139058 AGATAGTGATGTTCGGTGGCC 59.861 52.381 0.00 0.00 0.00 5.36
5064 5871 2.604046 AGATAGTGATGTTCGGTGGC 57.396 50.000 0.00 0.00 0.00 5.01
5065 5872 3.550233 CGGTAGATAGTGATGTTCGGTGG 60.550 52.174 0.00 0.00 0.00 4.61
5066 5873 3.314357 TCGGTAGATAGTGATGTTCGGTG 59.686 47.826 0.00 0.00 0.00 4.94
5067 5874 3.548770 TCGGTAGATAGTGATGTTCGGT 58.451 45.455 0.00 0.00 0.00 4.69
5068 5875 4.288531 GTTCGGTAGATAGTGATGTTCGG 58.711 47.826 0.00 0.00 0.00 4.30
5069 5876 3.966844 CGTTCGGTAGATAGTGATGTTCG 59.033 47.826 0.00 0.00 0.00 3.95
5070 5877 4.968788 GTCGTTCGGTAGATAGTGATGTTC 59.031 45.833 0.00 0.00 0.00 3.18
5071 5878 4.639310 AGTCGTTCGGTAGATAGTGATGTT 59.361 41.667 0.00 0.00 0.00 2.71
5072 5879 4.035324 CAGTCGTTCGGTAGATAGTGATGT 59.965 45.833 0.00 0.00 0.00 3.06
5073 5880 4.272748 TCAGTCGTTCGGTAGATAGTGATG 59.727 45.833 0.00 0.00 0.00 3.07
5074 5881 4.449131 TCAGTCGTTCGGTAGATAGTGAT 58.551 43.478 0.00 0.00 0.00 3.06
5075 5882 3.865446 TCAGTCGTTCGGTAGATAGTGA 58.135 45.455 0.00 0.00 0.00 3.41
5076 5883 4.341099 GTTCAGTCGTTCGGTAGATAGTG 58.659 47.826 0.00 0.00 0.00 2.74
5077 5884 3.376546 GGTTCAGTCGTTCGGTAGATAGT 59.623 47.826 0.00 0.00 0.00 2.12
5078 5885 3.545624 CGGTTCAGTCGTTCGGTAGATAG 60.546 52.174 0.00 0.00 0.00 2.08
5079 5886 2.352651 CGGTTCAGTCGTTCGGTAGATA 59.647 50.000 0.00 0.00 0.00 1.98
5080 5887 1.131883 CGGTTCAGTCGTTCGGTAGAT 59.868 52.381 0.00 0.00 0.00 1.98
5081 5888 0.518636 CGGTTCAGTCGTTCGGTAGA 59.481 55.000 0.00 0.00 0.00 2.59
5082 5889 0.518636 TCGGTTCAGTCGTTCGGTAG 59.481 55.000 0.00 0.00 0.00 3.18
5083 5890 1.131126 GATCGGTTCAGTCGTTCGGTA 59.869 52.381 0.00 0.00 0.00 4.02
5084 5891 0.109412 GATCGGTTCAGTCGTTCGGT 60.109 55.000 0.00 0.00 0.00 4.69
5085 5892 0.109458 TGATCGGTTCAGTCGTTCGG 60.109 55.000 0.00 0.00 31.33 4.30
5086 5893 1.260206 CTGATCGGTTCAGTCGTTCG 58.740 55.000 7.73 0.00 45.79 3.95
5094 5901 1.474330 TAGCAGAGCTGATCGGTTCA 58.526 50.000 19.23 0.00 40.10 3.18
5095 5902 2.810439 ATAGCAGAGCTGATCGGTTC 57.190 50.000 10.23 10.23 40.10 3.62
5096 5903 3.829026 TGATATAGCAGAGCTGATCGGTT 59.171 43.478 2.89 0.00 40.10 4.44
5097 5904 3.425659 TGATATAGCAGAGCTGATCGGT 58.574 45.455 2.89 0.00 40.10 4.69
5098 5905 4.361420 CATGATATAGCAGAGCTGATCGG 58.639 47.826 0.85 0.00 40.10 4.18
5099 5906 4.097589 TCCATGATATAGCAGAGCTGATCG 59.902 45.833 0.85 0.00 40.10 3.69
5100 5907 5.595257 TCCATGATATAGCAGAGCTGATC 57.405 43.478 0.85 5.46 40.10 2.92
5101 5908 5.900699 AGATCCATGATATAGCAGAGCTGAT 59.099 40.000 0.85 0.00 40.10 2.90
5102 5909 5.127356 CAGATCCATGATATAGCAGAGCTGA 59.873 44.000 16.25 1.27 39.47 4.26
5103 5910 5.127356 TCAGATCCATGATATAGCAGAGCTG 59.873 44.000 15.50 15.50 40.10 4.24
5104 5911 5.270794 TCAGATCCATGATATAGCAGAGCT 58.729 41.667 0.00 0.00 43.41 4.09
5105 5912 5.360429 TCTCAGATCCATGATATAGCAGAGC 59.640 44.000 0.00 0.00 0.00 4.09
5106 5913 6.829811 TCTCTCAGATCCATGATATAGCAGAG 59.170 42.308 0.00 0.00 0.00 3.35
5107 5914 6.602803 GTCTCTCAGATCCATGATATAGCAGA 59.397 42.308 0.00 0.00 0.00 4.26
5108 5915 6.377712 TGTCTCTCAGATCCATGATATAGCAG 59.622 42.308 0.00 0.00 0.00 4.24
5109 5916 6.152492 GTGTCTCTCAGATCCATGATATAGCA 59.848 42.308 0.00 0.00 0.00 3.49
5110 5917 6.152492 TGTGTCTCTCAGATCCATGATATAGC 59.848 42.308 0.00 0.00 0.00 2.97
5111 5918 7.700022 TGTGTCTCTCAGATCCATGATATAG 57.300 40.000 0.00 0.00 0.00 1.31
5112 5919 7.066766 CGATGTGTCTCTCAGATCCATGATATA 59.933 40.741 0.00 0.00 41.82 0.86
5113 5920 6.127675 CGATGTGTCTCTCAGATCCATGATAT 60.128 42.308 0.00 0.00 41.82 1.63
5114 5921 5.182760 CGATGTGTCTCTCAGATCCATGATA 59.817 44.000 0.00 0.00 41.82 2.15
5115 5922 4.022155 CGATGTGTCTCTCAGATCCATGAT 60.022 45.833 0.00 0.00 41.82 2.45
5116 5923 3.317430 CGATGTGTCTCTCAGATCCATGA 59.683 47.826 0.00 0.00 41.82 3.07
5117 5924 3.317430 TCGATGTGTCTCTCAGATCCATG 59.683 47.826 0.00 0.00 41.82 3.66
5118 5925 3.560105 TCGATGTGTCTCTCAGATCCAT 58.440 45.455 0.00 0.00 41.82 3.41
5119 5926 3.004752 TCGATGTGTCTCTCAGATCCA 57.995 47.619 0.00 0.00 41.82 3.41
5120 5927 3.380004 AGTTCGATGTGTCTCTCAGATCC 59.620 47.826 0.00 0.00 41.82 3.36
5121 5928 4.630894 AGTTCGATGTGTCTCTCAGATC 57.369 45.455 0.00 0.00 41.55 2.75
5122 5929 4.336993 GGTAGTTCGATGTGTCTCTCAGAT 59.663 45.833 0.00 0.00 32.56 2.90
5123 5930 3.690139 GGTAGTTCGATGTGTCTCTCAGA 59.310 47.826 0.00 0.00 0.00 3.27
5124 5931 3.692101 AGGTAGTTCGATGTGTCTCTCAG 59.308 47.826 0.00 0.00 0.00 3.35
5125 5932 3.687125 AGGTAGTTCGATGTGTCTCTCA 58.313 45.455 0.00 0.00 0.00 3.27
5126 5933 3.942748 AGAGGTAGTTCGATGTGTCTCTC 59.057 47.826 0.00 0.00 0.00 3.20
5127 5934 3.958018 AGAGGTAGTTCGATGTGTCTCT 58.042 45.455 0.00 0.00 0.00 3.10
5128 5935 5.220892 CCTTAGAGGTAGTTCGATGTGTCTC 60.221 48.000 0.00 0.00 0.00 3.36
5129 5936 4.641094 CCTTAGAGGTAGTTCGATGTGTCT 59.359 45.833 0.00 0.00 0.00 3.41
5130 5937 4.202030 CCCTTAGAGGTAGTTCGATGTGTC 60.202 50.000 0.00 0.00 31.93 3.67
5131 5938 3.700038 CCCTTAGAGGTAGTTCGATGTGT 59.300 47.826 0.00 0.00 31.93 3.72
5132 5939 3.952323 TCCCTTAGAGGTAGTTCGATGTG 59.048 47.826 0.00 0.00 31.93 3.21
5133 5940 3.952967 GTCCCTTAGAGGTAGTTCGATGT 59.047 47.826 0.00 0.00 31.93 3.06
5134 5941 3.952323 TGTCCCTTAGAGGTAGTTCGATG 59.048 47.826 0.00 0.00 31.93 3.84
5135 5942 4.246712 TGTCCCTTAGAGGTAGTTCGAT 57.753 45.455 0.00 0.00 31.93 3.59
5136 5943 3.726557 TGTCCCTTAGAGGTAGTTCGA 57.273 47.619 0.00 0.00 31.93 3.71
5137 5944 4.441634 CCATTGTCCCTTAGAGGTAGTTCG 60.442 50.000 0.00 0.00 31.93 3.95
5138 5945 4.470304 ACCATTGTCCCTTAGAGGTAGTTC 59.530 45.833 0.00 0.00 31.93 3.01
5139 5946 4.436079 ACCATTGTCCCTTAGAGGTAGTT 58.564 43.478 0.00 0.00 31.93 2.24
5140 5947 4.076175 ACCATTGTCCCTTAGAGGTAGT 57.924 45.455 0.00 0.00 31.93 2.73
5141 5948 6.326583 TGATAACCATTGTCCCTTAGAGGTAG 59.673 42.308 0.00 0.00 31.93 3.18
5142 5949 6.206787 TGATAACCATTGTCCCTTAGAGGTA 58.793 40.000 0.00 0.00 31.93 3.08
5143 5950 5.036916 TGATAACCATTGTCCCTTAGAGGT 58.963 41.667 0.00 0.00 31.93 3.85
5144 5951 5.630415 TGATAACCATTGTCCCTTAGAGG 57.370 43.478 0.00 0.00 34.30 3.69
5145 5952 6.000219 CCATGATAACCATTGTCCCTTAGAG 59.000 44.000 0.00 0.00 31.94 2.43
5146 5953 5.431731 ACCATGATAACCATTGTCCCTTAGA 59.568 40.000 0.00 0.00 31.94 2.10
5147 5954 5.694995 ACCATGATAACCATTGTCCCTTAG 58.305 41.667 0.00 0.00 31.94 2.18
5148 5955 5.725551 ACCATGATAACCATTGTCCCTTA 57.274 39.130 0.00 0.00 31.94 2.69
5149 5956 4.608170 ACCATGATAACCATTGTCCCTT 57.392 40.909 0.00 0.00 31.94 3.95
5150 5957 4.608170 AACCATGATAACCATTGTCCCT 57.392 40.909 0.00 0.00 30.74 4.20
5151 5958 5.675684 AAAACCATGATAACCATTGTCCC 57.324 39.130 0.00 0.00 30.74 4.46
5152 5959 6.368516 CACAAAAACCATGATAACCATTGTCC 59.631 38.462 0.00 0.00 30.74 4.02
5153 5960 6.928492 ACACAAAAACCATGATAACCATTGTC 59.072 34.615 0.00 0.00 30.74 3.18
5154 5961 6.825610 ACACAAAAACCATGATAACCATTGT 58.174 32.000 0.00 0.00 33.08 2.71
5155 5962 7.440556 TCAACACAAAAACCATGATAACCATTG 59.559 33.333 0.00 0.00 31.94 2.82
5156 5963 7.504403 TCAACACAAAAACCATGATAACCATT 58.496 30.769 0.00 0.00 31.94 3.16
5157 5964 7.060383 TCAACACAAAAACCATGATAACCAT 57.940 32.000 0.00 0.00 35.44 3.55
5158 5965 6.097554 ACTCAACACAAAAACCATGATAACCA 59.902 34.615 0.00 0.00 0.00 3.67
5159 5966 6.512297 ACTCAACACAAAAACCATGATAACC 58.488 36.000 0.00 0.00 0.00 2.85
5160 5967 9.522804 TTTACTCAACACAAAAACCATGATAAC 57.477 29.630 0.00 0.00 0.00 1.89
5163 5970 9.912634 CTATTTACTCAACACAAAAACCATGAT 57.087 29.630 0.00 0.00 0.00 2.45
5164 5971 8.356657 CCTATTTACTCAACACAAAAACCATGA 58.643 33.333 0.00 0.00 0.00 3.07
5165 5972 7.116233 GCCTATTTACTCAACACAAAAACCATG 59.884 37.037 0.00 0.00 0.00 3.66
5166 5973 7.151976 GCCTATTTACTCAACACAAAAACCAT 58.848 34.615 0.00 0.00 0.00 3.55
5167 5974 6.096987 TGCCTATTTACTCAACACAAAAACCA 59.903 34.615 0.00 0.00 0.00 3.67
5168 5975 6.508777 TGCCTATTTACTCAACACAAAAACC 58.491 36.000 0.00 0.00 0.00 3.27
5169 5976 7.995463 TTGCCTATTTACTCAACACAAAAAC 57.005 32.000 0.00 0.00 0.00 2.43
5170 5977 9.606631 AAATTGCCTATTTACTCAACACAAAAA 57.393 25.926 0.00 0.00 34.69 1.94
5171 5978 9.255304 GAAATTGCCTATTTACTCAACACAAAA 57.745 29.630 0.00 0.00 36.59 2.44
5172 5979 8.637986 AGAAATTGCCTATTTACTCAACACAAA 58.362 29.630 0.00 0.00 36.59 2.83
5173 5980 8.177119 AGAAATTGCCTATTTACTCAACACAA 57.823 30.769 0.00 0.00 36.59 3.33
5174 5981 7.360861 CGAGAAATTGCCTATTTACTCAACACA 60.361 37.037 0.00 0.00 36.59 3.72
5175 5982 6.961554 CGAGAAATTGCCTATTTACTCAACAC 59.038 38.462 0.00 0.00 36.59 3.32
5176 5983 6.876789 TCGAGAAATTGCCTATTTACTCAACA 59.123 34.615 0.00 0.00 36.59 3.33
5177 5984 7.303634 TCGAGAAATTGCCTATTTACTCAAC 57.696 36.000 0.00 0.00 36.59 3.18
5178 5985 8.506168 AATCGAGAAATTGCCTATTTACTCAA 57.494 30.769 0.00 0.00 36.59 3.02
5179 5986 9.607988 TTAATCGAGAAATTGCCTATTTACTCA 57.392 29.630 0.00 0.00 36.59 3.41
5188 5995 8.912988 TGGATTAATTTAATCGAGAAATTGCCT 58.087 29.630 22.08 11.75 44.24 4.75
5189 5996 8.968242 GTGGATTAATTTAATCGAGAAATTGCC 58.032 33.333 22.08 19.77 44.24 4.52
5190 5997 8.682016 CGTGGATTAATTTAATCGAGAAATTGC 58.318 33.333 22.08 14.50 44.24 3.56
5191 5998 9.929722 TCGTGGATTAATTTAATCGAGAAATTG 57.070 29.630 22.08 10.11 44.24 2.32
5193 6000 9.326413 ACTCGTGGATTAATTTAATCGAGAAAT 57.674 29.630 27.80 14.36 44.24 2.17
5194 6001 8.712285 ACTCGTGGATTAATTTAATCGAGAAA 57.288 30.769 27.80 13.16 44.24 2.52
5195 6002 9.806203 TTACTCGTGGATTAATTTAATCGAGAA 57.194 29.630 27.80 19.77 44.24 2.87
5196 6003 9.806203 TTTACTCGTGGATTAATTTAATCGAGA 57.194 29.630 27.80 20.93 44.24 4.04
5204 6011 8.827677 GCTAGTGATTTACTCGTGGATTAATTT 58.172 33.333 0.00 0.00 40.89 1.82
5205 6012 7.985184 TGCTAGTGATTTACTCGTGGATTAATT 59.015 33.333 0.00 0.00 40.89 1.40
5206 6013 7.497595 TGCTAGTGATTTACTCGTGGATTAAT 58.502 34.615 0.00 0.00 40.89 1.40
5207 6014 6.869695 TGCTAGTGATTTACTCGTGGATTAA 58.130 36.000 0.00 0.00 40.89 1.40
5208 6015 6.459670 TGCTAGTGATTTACTCGTGGATTA 57.540 37.500 0.00 0.00 40.89 1.75
5209 6016 5.339008 TGCTAGTGATTTACTCGTGGATT 57.661 39.130 0.00 0.00 40.89 3.01
5210 6017 5.292765 CATGCTAGTGATTTACTCGTGGAT 58.707 41.667 0.00 0.00 40.89 3.41
5211 6018 4.441495 CCATGCTAGTGATTTACTCGTGGA 60.441 45.833 3.64 0.00 40.34 4.02
5212 6019 3.804325 CCATGCTAGTGATTTACTCGTGG 59.196 47.826 0.00 0.00 40.89 4.94
5213 6020 3.246226 GCCATGCTAGTGATTTACTCGTG 59.754 47.826 0.00 0.00 40.89 4.35
5214 6021 3.118775 TGCCATGCTAGTGATTTACTCGT 60.119 43.478 0.00 0.00 40.89 4.18
5215 6022 3.457234 TGCCATGCTAGTGATTTACTCG 58.543 45.455 0.00 0.00 40.89 4.18
5216 6023 5.528690 TCAATGCCATGCTAGTGATTTACTC 59.471 40.000 0.00 0.00 40.89 2.59
5217 6024 5.297776 GTCAATGCCATGCTAGTGATTTACT 59.702 40.000 1.83 0.00 43.56 2.24
5218 6025 5.066375 TGTCAATGCCATGCTAGTGATTTAC 59.934 40.000 1.83 0.00 0.00 2.01
5219 6026 5.066375 GTGTCAATGCCATGCTAGTGATTTA 59.934 40.000 1.83 0.00 0.00 1.40
5220 6027 4.018490 TGTCAATGCCATGCTAGTGATTT 58.982 39.130 1.83 0.00 0.00 2.17
5221 6028 3.379372 GTGTCAATGCCATGCTAGTGATT 59.621 43.478 1.83 0.00 0.00 2.57
5222 6029 2.947652 GTGTCAATGCCATGCTAGTGAT 59.052 45.455 1.83 0.00 0.00 3.06
5223 6030 2.290197 TGTGTCAATGCCATGCTAGTGA 60.290 45.455 0.00 0.00 0.00 3.41
5224 6031 2.086094 TGTGTCAATGCCATGCTAGTG 58.914 47.619 0.00 0.00 0.00 2.74
5225 6032 2.495155 TGTGTCAATGCCATGCTAGT 57.505 45.000 0.00 0.00 0.00 2.57
5226 6033 3.853831 TTTGTGTCAATGCCATGCTAG 57.146 42.857 0.00 0.00 0.00 3.42
5227 6034 5.911378 TTATTTGTGTCAATGCCATGCTA 57.089 34.783 0.00 0.00 0.00 3.49
5228 6035 4.804868 TTATTTGTGTCAATGCCATGCT 57.195 36.364 0.00 0.00 0.00 3.79
5229 6036 4.201608 CGTTTATTTGTGTCAATGCCATGC 60.202 41.667 0.00 0.00 0.00 4.06
5230 6037 4.201608 GCGTTTATTTGTGTCAATGCCATG 60.202 41.667 0.00 0.00 0.00 3.66
5231 6038 3.925913 GCGTTTATTTGTGTCAATGCCAT 59.074 39.130 0.00 0.00 0.00 4.40
5232 6039 3.243535 TGCGTTTATTTGTGTCAATGCCA 60.244 39.130 0.00 0.00 31.30 4.92
5233 6040 3.312828 TGCGTTTATTTGTGTCAATGCC 58.687 40.909 0.00 0.00 31.30 4.40
5234 6041 5.799936 AGTATGCGTTTATTTGTGTCAATGC 59.200 36.000 0.00 0.00 0.00 3.56
5235 6042 7.020602 TCAGTATGCGTTTATTTGTGTCAATG 58.979 34.615 0.00 0.00 34.76 2.82
5236 6043 7.139896 TCAGTATGCGTTTATTTGTGTCAAT 57.860 32.000 0.00 0.00 34.76 2.57
5237 6044 6.546972 TCAGTATGCGTTTATTTGTGTCAA 57.453 33.333 0.00 0.00 34.76 3.18
5238 6045 6.735678 ATCAGTATGCGTTTATTTGTGTCA 57.264 33.333 0.00 0.00 34.76 3.58
5239 6046 9.716507 AAATATCAGTATGCGTTTATTTGTGTC 57.283 29.630 0.00 0.00 34.76 3.67
5240 6047 9.716507 GAAATATCAGTATGCGTTTATTTGTGT 57.283 29.630 0.00 0.00 34.76 3.72
5241 6048 9.715123 TGAAATATCAGTATGCGTTTATTTGTG 57.285 29.630 0.00 0.00 34.76 3.33
5242 6049 9.935682 CTGAAATATCAGTATGCGTTTATTTGT 57.064 29.630 0.00 0.00 46.60 2.83
5258 6065 4.761227 TGTGCTTGCTTGACTGAAATATCA 59.239 37.500 0.00 0.00 0.00 2.15
5259 6066 5.300969 TGTGCTTGCTTGACTGAAATATC 57.699 39.130 0.00 0.00 0.00 1.63
5260 6067 5.909621 ATGTGCTTGCTTGACTGAAATAT 57.090 34.783 0.00 0.00 0.00 1.28
5261 6068 5.939883 AGTATGTGCTTGCTTGACTGAAATA 59.060 36.000 0.00 0.00 0.00 1.40
5262 6069 4.763793 AGTATGTGCTTGCTTGACTGAAAT 59.236 37.500 0.00 0.00 0.00 2.17
5263 6070 4.136796 AGTATGTGCTTGCTTGACTGAAA 58.863 39.130 0.00 0.00 0.00 2.69
5264 6071 3.743521 AGTATGTGCTTGCTTGACTGAA 58.256 40.909 0.00 0.00 0.00 3.02
5265 6072 3.407424 AGTATGTGCTTGCTTGACTGA 57.593 42.857 0.00 0.00 0.00 3.41
5266 6073 3.061295 CGTAGTATGTGCTTGCTTGACTG 59.939 47.826 0.00 0.00 0.00 3.51
5267 6074 3.254060 CGTAGTATGTGCTTGCTTGACT 58.746 45.455 0.00 0.00 0.00 3.41
5268 6075 2.222819 GCGTAGTATGTGCTTGCTTGAC 60.223 50.000 0.00 0.00 0.00 3.18
5269 6076 1.999735 GCGTAGTATGTGCTTGCTTGA 59.000 47.619 0.00 0.00 0.00 3.02
5270 6077 2.002586 AGCGTAGTATGTGCTTGCTTG 58.997 47.619 0.00 0.00 34.80 4.01
5271 6078 2.386661 AGCGTAGTATGTGCTTGCTT 57.613 45.000 0.00 0.00 34.80 3.91
5272 6079 3.119101 ACTTAGCGTAGTATGTGCTTGCT 60.119 43.478 0.67 0.00 40.06 3.91
5273 6080 3.000322 CACTTAGCGTAGTATGTGCTTGC 60.000 47.826 0.67 0.00 40.06 4.01
5274 6081 3.000322 GCACTTAGCGTAGTATGTGCTTG 60.000 47.826 17.50 0.00 44.66 4.01
5275 6082 3.187700 GCACTTAGCGTAGTATGTGCTT 58.812 45.455 17.50 0.00 44.66 3.91
5276 6083 2.810650 GCACTTAGCGTAGTATGTGCT 58.189 47.619 17.50 0.00 44.66 4.40
5288 6095 4.425520 ACGTAGATCTTTCTGCACTTAGC 58.574 43.478 0.00 0.00 45.96 3.09
5289 6096 9.171701 GTTATACGTAGATCTTTCTGCACTTAG 57.828 37.037 0.00 0.00 34.53 2.18
5290 6097 7.854422 CGTTATACGTAGATCTTTCTGCACTTA 59.146 37.037 0.00 0.00 36.74 2.24
5291 6098 6.691818 CGTTATACGTAGATCTTTCTGCACTT 59.308 38.462 0.00 0.00 36.74 3.16
5292 6099 6.200100 CGTTATACGTAGATCTTTCTGCACT 58.800 40.000 0.00 0.00 36.74 4.40
5293 6100 5.108330 GCGTTATACGTAGATCTTTCTGCAC 60.108 44.000 0.00 0.00 44.73 4.57
5294 6101 4.974275 GCGTTATACGTAGATCTTTCTGCA 59.026 41.667 0.00 0.00 44.73 4.41
5295 6102 5.213675 AGCGTTATACGTAGATCTTTCTGC 58.786 41.667 0.00 0.00 44.73 4.26
5296 6103 6.520447 GCTAGCGTTATACGTAGATCTTTCTG 59.480 42.308 0.00 0.00 44.73 3.02
5297 6104 6.204301 TGCTAGCGTTATACGTAGATCTTTCT 59.796 38.462 10.77 0.00 44.73 2.52
5298 6105 6.369005 TGCTAGCGTTATACGTAGATCTTTC 58.631 40.000 10.77 0.00 44.73 2.62
5299 6106 6.309712 TGCTAGCGTTATACGTAGATCTTT 57.690 37.500 10.77 0.00 44.73 2.52
5300 6107 5.936686 TGCTAGCGTTATACGTAGATCTT 57.063 39.130 10.77 0.00 44.73 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.