Multiple sequence alignment - TraesCS2D01G140000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G140000 chr2D 100.000 4273 0 0 1 4273 82267972 82263700 0.000000e+00 7891.0
1 TraesCS2D01G140000 chr2D 79.655 2143 358 49 1168 3252 81943021 81940899 0.000000e+00 1471.0
2 TraesCS2D01G140000 chr2A 91.180 3254 168 51 494 3672 82358987 82355778 0.000000e+00 4309.0
3 TraesCS2D01G140000 chr2A 93.569 2721 103 27 895 3576 82538513 82535826 0.000000e+00 3989.0
4 TraesCS2D01G140000 chr2A 84.724 1774 229 25 899 2666 82975559 82973822 0.000000e+00 1736.0
5 TraesCS2D01G140000 chr2A 80.380 2105 364 36 1168 3233 82201255 82199161 0.000000e+00 1554.0
6 TraesCS2D01G140000 chr2A 83.806 1550 228 13 1165 2699 82069444 82067903 0.000000e+00 1450.0
7 TraesCS2D01G140000 chr2A 84.868 456 66 3 2778 3231 82973742 82973288 1.400000e-124 457.0
8 TraesCS2D01G140000 chr2A 90.909 154 14 0 496 649 82538987 82538834 1.560000e-49 207.0
9 TraesCS2D01G140000 chr2B 94.431 2442 108 13 895 3334 134350127 134347712 0.000000e+00 3731.0
10 TraesCS2D01G140000 chr2B 84.166 2482 319 39 899 3348 134242822 134240383 0.000000e+00 2338.0
11 TraesCS2D01G140000 chr2B 85.651 2272 232 40 473 2666 134366664 134364409 0.000000e+00 2303.0
12 TraesCS2D01G140000 chr2B 78.644 2168 384 42 1168 3283 133808322 133806182 0.000000e+00 1365.0
13 TraesCS2D01G140000 chr2B 92.029 690 33 8 3005 3672 134308573 134307884 0.000000e+00 950.0
14 TraesCS2D01G140000 chr2B 84.553 492 70 5 2751 3237 134364362 134363872 2.310000e-132 483.0
15 TraesCS2D01G140000 chr2B 91.086 359 17 2 3329 3672 134340428 134340070 5.000000e-129 472.0
16 TraesCS2D01G140000 chr2B 80.795 302 47 11 8 302 774771511 774771214 4.300000e-55 226.0
17 TraesCS2D01G140000 chr2B 91.603 131 11 0 497 627 134350600 134350470 9.440000e-42 182.0
18 TraesCS2D01G140000 chr2B 84.874 119 10 7 3669 3783 18321644 18321758 3.490000e-21 113.0
19 TraesCS2D01G140000 chr2B 92.405 79 5 1 3665 3742 182259769 182259691 1.260000e-20 111.0
20 TraesCS2D01G140000 chr7D 97.364 607 15 1 3668 4273 109439233 109439839 0.000000e+00 1031.0
21 TraesCS2D01G140000 chr3D 95.238 609 12 8 3667 4273 579330544 579331137 0.000000e+00 948.0
22 TraesCS2D01G140000 chr3D 83.080 591 45 35 3669 4235 119256038 119256597 1.790000e-133 486.0
23 TraesCS2D01G140000 chr3D 89.474 57 6 0 3898 3954 119256333 119256389 5.930000e-09 73.1
24 TraesCS2D01G140000 chrUn 93.245 607 13 8 3668 4273 134356498 134355919 0.000000e+00 869.0
25 TraesCS2D01G140000 chrUn 86.281 605 36 30 3672 4263 24203133 24203703 7.850000e-172 614.0
26 TraesCS2D01G140000 chrUn 94.783 115 6 0 3898 4012 24203397 24203511 3.390000e-41 180.0
27 TraesCS2D01G140000 chr4D 91.325 634 18 14 3668 4273 502604548 502605172 0.000000e+00 832.0
28 TraesCS2D01G140000 chr5D 87.324 568 45 14 3661 4212 531442624 531442068 3.630000e-175 625.0
29 TraesCS2D01G140000 chr1D 85.155 613 40 27 3670 4273 475696854 475696284 7.960000e-162 580.0
30 TraesCS2D01G140000 chr1D 94.981 259 9 2 4009 4263 383657790 383658048 1.850000e-108 403.0
31 TraesCS2D01G140000 chr1D 82.051 195 13 12 3669 3853 383657518 383657700 3.440000e-31 147.0
32 TraesCS2D01G140000 chr1D 100.000 79 0 0 4185 4263 475696311 475696233 3.440000e-31 147.0
33 TraesCS2D01G140000 chr1D 100.000 28 0 0 4246 4273 383657970 383657997 8.000000e-03 52.8
34 TraesCS2D01G140000 chr5A 80.583 309 38 16 3669 3960 42654567 42654264 7.190000e-53 219.0
35 TraesCS2D01G140000 chr5A 88.889 90 8 2 3667 3754 653929628 653929717 4.520000e-20 110.0
36 TraesCS2D01G140000 chr6B 80.000 305 47 9 10 302 516822810 516822508 3.350000e-51 213.0
37 TraesCS2D01G140000 chr6D 76.568 303 58 8 10 302 342436871 342436572 2.060000e-33 154.0
38 TraesCS2D01G140000 chr3B 78.500 200 33 7 112 302 637663976 637663778 5.800000e-24 122.0
39 TraesCS2D01G140000 chr4A 87.500 96 10 2 3668 3761 45554825 45554920 4.520000e-20 110.0
40 TraesCS2D01G140000 chr3A 88.889 90 8 2 3667 3754 477416838 477416927 4.520000e-20 110.0
41 TraesCS2D01G140000 chr5B 85.714 98 12 2 3666 3761 116643867 116643964 7.560000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G140000 chr2D 82263700 82267972 4272 True 7891.000000 7891 100.0000 1 4273 1 chr2D.!!$R2 4272
1 TraesCS2D01G140000 chr2D 81940899 81943021 2122 True 1471.000000 1471 79.6550 1168 3252 1 chr2D.!!$R1 2084
2 TraesCS2D01G140000 chr2A 82355778 82358987 3209 True 4309.000000 4309 91.1800 494 3672 1 chr2A.!!$R3 3178
3 TraesCS2D01G140000 chr2A 82535826 82538987 3161 True 2098.000000 3989 92.2390 496 3576 2 chr2A.!!$R4 3080
4 TraesCS2D01G140000 chr2A 82199161 82201255 2094 True 1554.000000 1554 80.3800 1168 3233 1 chr2A.!!$R2 2065
5 TraesCS2D01G140000 chr2A 82067903 82069444 1541 True 1450.000000 1450 83.8060 1165 2699 1 chr2A.!!$R1 1534
6 TraesCS2D01G140000 chr2A 82973288 82975559 2271 True 1096.500000 1736 84.7960 899 3231 2 chr2A.!!$R5 2332
7 TraesCS2D01G140000 chr2B 134240383 134242822 2439 True 2338.000000 2338 84.1660 899 3348 1 chr2B.!!$R2 2449
8 TraesCS2D01G140000 chr2B 134347712 134350600 2888 True 1956.500000 3731 93.0170 497 3334 2 chr2B.!!$R7 2837
9 TraesCS2D01G140000 chr2B 134363872 134366664 2792 True 1393.000000 2303 85.1020 473 3237 2 chr2B.!!$R8 2764
10 TraesCS2D01G140000 chr2B 133806182 133808322 2140 True 1365.000000 1365 78.6440 1168 3283 1 chr2B.!!$R1 2115
11 TraesCS2D01G140000 chr2B 134307884 134308573 689 True 950.000000 950 92.0290 3005 3672 1 chr2B.!!$R3 667
12 TraesCS2D01G140000 chr7D 109439233 109439839 606 False 1031.000000 1031 97.3640 3668 4273 1 chr7D.!!$F1 605
13 TraesCS2D01G140000 chr3D 579330544 579331137 593 False 948.000000 948 95.2380 3667 4273 1 chr3D.!!$F1 606
14 TraesCS2D01G140000 chr3D 119256038 119256597 559 False 279.550000 486 86.2770 3669 4235 2 chr3D.!!$F2 566
15 TraesCS2D01G140000 chrUn 134355919 134356498 579 True 869.000000 869 93.2450 3668 4273 1 chrUn.!!$R1 605
16 TraesCS2D01G140000 chrUn 24203133 24203703 570 False 397.000000 614 90.5320 3672 4263 2 chrUn.!!$F1 591
17 TraesCS2D01G140000 chr4D 502604548 502605172 624 False 832.000000 832 91.3250 3668 4273 1 chr4D.!!$F1 605
18 TraesCS2D01G140000 chr5D 531442068 531442624 556 True 625.000000 625 87.3240 3661 4212 1 chr5D.!!$R1 551
19 TraesCS2D01G140000 chr1D 475696233 475696854 621 True 363.500000 580 92.5775 3670 4273 2 chr1D.!!$R1 603
20 TraesCS2D01G140000 chr1D 383657518 383658048 530 False 200.933333 403 92.3440 3669 4273 3 chr1D.!!$F1 604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
76 77 0.109226 GAAGGCGTTCGCAGTAGAGT 60.109 55.0 18.46 0.0 0.00 3.24 F
445 446 0.109412 AAAAGCAAGCATCGCAGCTC 60.109 50.0 6.43 0.0 45.89 4.09 F
585 586 0.179006 CCAGAGGAGCATTTAGGCCC 60.179 60.0 0.00 0.0 0.00 5.80 F
730 782 0.541863 GGTGTCACCAGGAGTATGGG 59.458 60.0 17.59 0.0 45.25 4.00 F
765 835 0.601558 CCGTATCACTATGGGGTCCG 59.398 60.0 0.00 0.0 31.27 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1110 1207 0.037303 CAGGCTCACTTCCACCATGT 59.963 55.000 0.00 0.00 0.00 3.21 R
1422 1540 1.424493 CGGCGAGCTGATTCTTGGAC 61.424 60.000 0.00 0.00 0.00 4.02 R
2047 2207 5.601662 TGTGAATCTTATGATCTTCGGGAC 58.398 41.667 0.00 0.00 31.51 4.46 R
3031 3242 2.096980 TGTATGACTTGCTCGAGTACCG 59.903 50.000 15.13 5.89 40.25 4.02 R
3390 3638 5.703978 AATCATCCACAACATTGTTTCGA 57.296 34.783 0.00 0.00 39.91 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.343821 CAATAGCGACAACGACGGC 59.656 57.895 0.00 0.00 42.66 5.68
19 20 1.808390 AATAGCGACAACGACGGCC 60.808 57.895 0.00 0.00 42.66 6.13
20 21 3.711541 ATAGCGACAACGACGGCCC 62.712 63.158 0.00 0.00 42.66 5.80
30 31 4.851179 GACGGCCCCGACCCAATC 62.851 72.222 14.44 0.00 42.83 2.67
32 33 4.189580 CGGCCCCGACCCAATCAT 62.190 66.667 0.00 0.00 42.83 2.45
33 34 2.203351 GGCCCCGACCCAATCATC 60.203 66.667 0.00 0.00 0.00 2.92
34 35 2.203351 GCCCCGACCCAATCATCC 60.203 66.667 0.00 0.00 0.00 3.51
35 36 2.111043 CCCCGACCCAATCATCCG 59.889 66.667 0.00 0.00 0.00 4.18
36 37 2.439960 CCCCGACCCAATCATCCGA 61.440 63.158 0.00 0.00 0.00 4.55
37 38 1.069765 CCCGACCCAATCATCCGAG 59.930 63.158 0.00 0.00 0.00 4.63
38 39 1.069765 CCGACCCAATCATCCGAGG 59.930 63.158 0.00 0.00 0.00 4.63
39 40 1.686325 CCGACCCAATCATCCGAGGT 61.686 60.000 0.00 0.00 0.00 3.85
40 41 0.178068 CGACCCAATCATCCGAGGTT 59.822 55.000 0.00 0.00 0.00 3.50
41 42 1.406887 CGACCCAATCATCCGAGGTTT 60.407 52.381 0.00 0.00 0.00 3.27
42 43 2.017049 GACCCAATCATCCGAGGTTTG 58.983 52.381 0.00 0.00 0.00 2.93
43 44 1.633432 ACCCAATCATCCGAGGTTTGA 59.367 47.619 5.60 1.39 0.00 2.69
44 45 2.017049 CCCAATCATCCGAGGTTTGAC 58.983 52.381 5.60 0.00 0.00 3.18
45 46 2.017049 CCAATCATCCGAGGTTTGACC 58.983 52.381 5.60 0.00 38.99 4.02
46 47 2.617788 CCAATCATCCGAGGTTTGACCA 60.618 50.000 5.60 0.00 41.95 4.02
47 48 2.679837 CAATCATCCGAGGTTTGACCAG 59.320 50.000 0.00 0.00 41.95 4.00
48 49 1.639722 TCATCCGAGGTTTGACCAGA 58.360 50.000 0.00 0.00 41.95 3.86
49 50 1.974957 TCATCCGAGGTTTGACCAGAA 59.025 47.619 0.00 0.00 41.95 3.02
50 51 2.028112 TCATCCGAGGTTTGACCAGAAG 60.028 50.000 0.00 0.00 41.95 2.85
51 52 0.685097 TCCGAGGTTTGACCAGAAGG 59.315 55.000 0.00 0.00 41.95 3.46
52 53 0.321653 CCGAGGTTTGACCAGAAGGG 60.322 60.000 0.00 0.00 41.95 3.95
53 54 0.685097 CGAGGTTTGACCAGAAGGGA 59.315 55.000 0.00 0.00 41.95 4.20
54 55 1.338200 CGAGGTTTGACCAGAAGGGAG 60.338 57.143 0.00 0.00 41.95 4.30
55 56 1.700186 GAGGTTTGACCAGAAGGGAGT 59.300 52.381 0.00 0.00 41.95 3.85
56 57 1.421646 AGGTTTGACCAGAAGGGAGTG 59.578 52.381 0.00 0.00 41.95 3.51
57 58 1.545651 GGTTTGACCAGAAGGGAGTGG 60.546 57.143 0.00 0.00 38.42 4.00
58 59 1.420138 GTTTGACCAGAAGGGAGTGGA 59.580 52.381 0.00 0.00 41.15 4.02
59 60 1.814429 TTGACCAGAAGGGAGTGGAA 58.186 50.000 0.00 0.00 41.15 3.53
60 61 1.352083 TGACCAGAAGGGAGTGGAAG 58.648 55.000 0.00 0.00 41.15 3.46
61 62 0.615850 GACCAGAAGGGAGTGGAAGG 59.384 60.000 0.00 0.00 41.15 3.46
62 63 1.301293 CCAGAAGGGAGTGGAAGGC 59.699 63.158 0.00 0.00 40.01 4.35
63 64 1.078848 CAGAAGGGAGTGGAAGGCG 60.079 63.158 0.00 0.00 0.00 5.52
64 65 1.536662 AGAAGGGAGTGGAAGGCGT 60.537 57.895 0.00 0.00 0.00 5.68
65 66 1.128188 AGAAGGGAGTGGAAGGCGTT 61.128 55.000 0.00 0.00 0.00 4.84
66 67 0.673956 GAAGGGAGTGGAAGGCGTTC 60.674 60.000 10.68 10.68 0.00 3.95
67 68 2.434359 GGGAGTGGAAGGCGTTCG 60.434 66.667 12.65 0.00 32.92 3.95
68 69 3.119096 GGAGTGGAAGGCGTTCGC 61.119 66.667 12.65 8.75 32.92 4.70
69 70 2.357034 GAGTGGAAGGCGTTCGCA 60.357 61.111 18.46 9.16 32.92 5.10
70 71 2.357517 AGTGGAAGGCGTTCGCAG 60.358 61.111 18.46 0.00 32.92 5.18
71 72 2.665185 GTGGAAGGCGTTCGCAGT 60.665 61.111 18.46 5.61 32.92 4.40
72 73 1.373748 GTGGAAGGCGTTCGCAGTA 60.374 57.895 18.46 0.00 32.92 2.74
73 74 1.080093 TGGAAGGCGTTCGCAGTAG 60.080 57.895 18.46 0.00 32.92 2.57
74 75 1.214589 GGAAGGCGTTCGCAGTAGA 59.785 57.895 18.46 0.00 32.92 2.59
75 76 0.802607 GGAAGGCGTTCGCAGTAGAG 60.803 60.000 18.46 0.00 32.92 2.43
76 77 0.109226 GAAGGCGTTCGCAGTAGAGT 60.109 55.000 18.46 0.00 0.00 3.24
77 78 0.109226 AAGGCGTTCGCAGTAGAGTC 60.109 55.000 18.46 0.00 0.00 3.36
78 79 1.868251 GGCGTTCGCAGTAGAGTCG 60.868 63.158 18.46 0.00 0.00 4.18
79 80 1.868251 GCGTTCGCAGTAGAGTCGG 60.868 63.158 12.33 0.00 0.00 4.79
80 81 1.792301 CGTTCGCAGTAGAGTCGGA 59.208 57.895 0.00 0.00 0.00 4.55
81 82 0.520827 CGTTCGCAGTAGAGTCGGAC 60.521 60.000 0.00 0.00 0.00 4.79
82 83 0.803740 GTTCGCAGTAGAGTCGGACT 59.196 55.000 11.09 11.09 0.00 3.85
83 84 2.005451 GTTCGCAGTAGAGTCGGACTA 58.995 52.381 11.27 0.00 0.00 2.59
84 85 1.937278 TCGCAGTAGAGTCGGACTAG 58.063 55.000 11.27 0.61 0.00 2.57
85 86 0.938713 CGCAGTAGAGTCGGACTAGG 59.061 60.000 11.27 0.56 0.00 3.02
86 87 1.743091 CGCAGTAGAGTCGGACTAGGT 60.743 57.143 11.27 1.60 0.00 3.08
87 88 2.367486 GCAGTAGAGTCGGACTAGGTT 58.633 52.381 11.27 0.26 0.00 3.50
88 89 2.754002 GCAGTAGAGTCGGACTAGGTTT 59.246 50.000 11.27 0.00 0.00 3.27
89 90 3.944015 GCAGTAGAGTCGGACTAGGTTTA 59.056 47.826 11.27 0.00 0.00 2.01
90 91 4.397417 GCAGTAGAGTCGGACTAGGTTTAA 59.603 45.833 11.27 0.00 0.00 1.52
91 92 5.105997 GCAGTAGAGTCGGACTAGGTTTAAA 60.106 44.000 11.27 0.00 0.00 1.52
92 93 6.571150 GCAGTAGAGTCGGACTAGGTTTAAAA 60.571 42.308 11.27 0.00 0.00 1.52
93 94 7.373493 CAGTAGAGTCGGACTAGGTTTAAAAA 58.627 38.462 11.27 0.00 0.00 1.94
155 156 8.489990 TGTAAAATATTCGGAATTTGTACGGA 57.510 30.769 8.76 0.00 0.00 4.69
156 157 8.944029 TGTAAAATATTCGGAATTTGTACGGAA 58.056 29.630 8.76 0.00 0.00 4.30
157 158 9.940166 GTAAAATATTCGGAATTTGTACGGAAT 57.060 29.630 8.76 0.00 38.72 3.01
158 159 8.850454 AAAATATTCGGAATTTGTACGGAATG 57.150 30.769 8.76 0.00 36.94 2.67
159 160 7.562454 AATATTCGGAATTTGTACGGAATGT 57.438 32.000 8.76 0.00 36.94 2.71
160 161 4.932268 TTCGGAATTTGTACGGAATGTC 57.068 40.909 0.00 0.00 0.00 3.06
161 162 2.924926 TCGGAATTTGTACGGAATGTCG 59.075 45.455 0.00 0.68 0.00 4.35
162 163 2.669434 CGGAATTTGTACGGAATGTCGT 59.331 45.455 0.00 0.00 45.88 4.34
163 164 3.123959 CGGAATTTGTACGGAATGTCGTT 59.876 43.478 0.00 0.00 43.59 3.85
164 165 4.377635 CGGAATTTGTACGGAATGTCGTTT 60.378 41.667 0.00 0.00 43.59 3.60
165 166 5.163972 CGGAATTTGTACGGAATGTCGTTTA 60.164 40.000 0.00 0.00 43.59 2.01
166 167 6.601264 GGAATTTGTACGGAATGTCGTTTAA 58.399 36.000 0.00 0.00 43.59 1.52
167 168 6.739550 GGAATTTGTACGGAATGTCGTTTAAG 59.260 38.462 0.00 0.00 43.59 1.85
168 169 6.790285 ATTTGTACGGAATGTCGTTTAAGT 57.210 33.333 0.00 0.00 43.59 2.24
169 170 7.887996 ATTTGTACGGAATGTCGTTTAAGTA 57.112 32.000 0.00 0.00 43.59 2.24
170 171 7.887996 TTTGTACGGAATGTCGTTTAAGTAT 57.112 32.000 0.00 0.00 43.59 2.12
171 172 6.874297 TGTACGGAATGTCGTTTAAGTATG 57.126 37.500 0.00 0.00 43.59 2.39
172 173 6.389091 TGTACGGAATGTCGTTTAAGTATGT 58.611 36.000 0.00 0.00 43.59 2.29
173 174 6.867816 TGTACGGAATGTCGTTTAAGTATGTT 59.132 34.615 0.00 0.00 43.59 2.71
174 175 6.790285 ACGGAATGTCGTTTAAGTATGTTT 57.210 33.333 0.00 0.00 40.85 2.83
175 176 7.193377 ACGGAATGTCGTTTAAGTATGTTTT 57.807 32.000 0.00 0.00 40.85 2.43
176 177 8.309163 ACGGAATGTCGTTTAAGTATGTTTTA 57.691 30.769 0.00 0.00 40.85 1.52
177 178 8.938906 ACGGAATGTCGTTTAAGTATGTTTTAT 58.061 29.630 0.00 0.00 40.85 1.40
178 179 9.205916 CGGAATGTCGTTTAAGTATGTTTTATG 57.794 33.333 0.00 0.00 0.00 1.90
182 183 8.836268 TGTCGTTTAAGTATGTTTTATGTCCT 57.164 30.769 0.00 0.00 0.00 3.85
183 184 9.926158 TGTCGTTTAAGTATGTTTTATGTCCTA 57.074 29.630 0.00 0.00 0.00 2.94
192 193 9.227777 AGTATGTTTTATGTCCTAGTTTGAACC 57.772 33.333 0.00 0.00 0.00 3.62
193 194 9.227777 GTATGTTTTATGTCCTAGTTTGAACCT 57.772 33.333 0.00 0.00 0.00 3.50
195 196 9.802039 ATGTTTTATGTCCTAGTTTGAACCTAA 57.198 29.630 0.00 0.00 0.00 2.69
196 197 9.802039 TGTTTTATGTCCTAGTTTGAACCTAAT 57.198 29.630 0.00 0.00 0.00 1.73
200 201 9.609346 TTATGTCCTAGTTTGAACCTAATTAGC 57.391 33.333 6.99 0.00 0.00 3.09
201 202 7.011499 TGTCCTAGTTTGAACCTAATTAGCA 57.989 36.000 6.99 0.00 0.00 3.49
202 203 6.877322 TGTCCTAGTTTGAACCTAATTAGCAC 59.123 38.462 6.99 1.62 0.00 4.40
203 204 6.315642 GTCCTAGTTTGAACCTAATTAGCACC 59.684 42.308 6.99 0.00 0.00 5.01
204 205 6.013206 TCCTAGTTTGAACCTAATTAGCACCA 60.013 38.462 6.99 1.50 0.00 4.17
205 206 6.657541 CCTAGTTTGAACCTAATTAGCACCAA 59.342 38.462 6.99 7.14 0.00 3.67
206 207 6.969993 AGTTTGAACCTAATTAGCACCAAA 57.030 33.333 6.99 11.95 0.00 3.28
207 208 7.539034 AGTTTGAACCTAATTAGCACCAAAT 57.461 32.000 18.51 10.68 0.00 2.32
208 209 7.962441 AGTTTGAACCTAATTAGCACCAAATT 58.038 30.769 18.51 14.64 0.00 1.82
209 210 8.428852 AGTTTGAACCTAATTAGCACCAAATTT 58.571 29.630 18.51 12.08 0.00 1.82
210 211 8.495148 GTTTGAACCTAATTAGCACCAAATTTG 58.505 33.333 11.40 11.40 0.00 2.32
211 212 7.296628 TGAACCTAATTAGCACCAAATTTGT 57.703 32.000 16.73 2.76 0.00 2.83
212 213 7.151308 TGAACCTAATTAGCACCAAATTTGTG 58.849 34.615 16.73 14.71 0.00 3.33
213 214 6.664428 ACCTAATTAGCACCAAATTTGTGT 57.336 33.333 16.73 11.18 0.00 3.72
214 215 7.061566 ACCTAATTAGCACCAAATTTGTGTT 57.938 32.000 16.73 14.02 0.00 3.32
215 216 7.151976 ACCTAATTAGCACCAAATTTGTGTTC 58.848 34.615 16.73 8.88 0.00 3.18
216 217 7.151308 CCTAATTAGCACCAAATTTGTGTTCA 58.849 34.615 16.73 5.88 0.00 3.18
217 218 7.818930 CCTAATTAGCACCAAATTTGTGTTCAT 59.181 33.333 16.73 7.62 0.00 2.57
218 219 9.853555 CTAATTAGCACCAAATTTGTGTTCATA 57.146 29.630 16.73 4.95 0.00 2.15
220 221 8.706492 ATTAGCACCAAATTTGTGTTCATATG 57.294 30.769 16.73 0.00 0.00 1.78
221 222 4.931002 AGCACCAAATTTGTGTTCATATGC 59.069 37.500 16.73 11.63 0.00 3.14
222 223 4.093261 GCACCAAATTTGTGTTCATATGCC 59.907 41.667 16.73 0.00 0.00 4.40
223 224 5.481105 CACCAAATTTGTGTTCATATGCCT 58.519 37.500 16.73 0.00 0.00 4.75
224 225 5.577945 CACCAAATTTGTGTTCATATGCCTC 59.422 40.000 16.73 0.00 0.00 4.70
225 226 5.111293 CCAAATTTGTGTTCATATGCCTCC 58.889 41.667 16.73 0.00 0.00 4.30
226 227 4.637483 AATTTGTGTTCATATGCCTCCG 57.363 40.909 0.00 0.00 0.00 4.63
227 228 3.342377 TTTGTGTTCATATGCCTCCGA 57.658 42.857 0.00 0.00 0.00 4.55
228 229 3.558931 TTGTGTTCATATGCCTCCGAT 57.441 42.857 0.00 0.00 0.00 4.18
229 230 3.558931 TGTGTTCATATGCCTCCGATT 57.441 42.857 0.00 0.00 0.00 3.34
230 231 3.884895 TGTGTTCATATGCCTCCGATTT 58.115 40.909 0.00 0.00 0.00 2.17
231 232 4.269183 TGTGTTCATATGCCTCCGATTTT 58.731 39.130 0.00 0.00 0.00 1.82
232 233 4.704540 TGTGTTCATATGCCTCCGATTTTT 59.295 37.500 0.00 0.00 0.00 1.94
233 234 5.883115 TGTGTTCATATGCCTCCGATTTTTA 59.117 36.000 0.00 0.00 0.00 1.52
234 235 6.545666 TGTGTTCATATGCCTCCGATTTTTAT 59.454 34.615 0.00 0.00 0.00 1.40
235 236 7.068103 TGTGTTCATATGCCTCCGATTTTTATT 59.932 33.333 0.00 0.00 0.00 1.40
236 237 7.920682 GTGTTCATATGCCTCCGATTTTTATTT 59.079 33.333 0.00 0.00 0.00 1.40
237 238 9.126151 TGTTCATATGCCTCCGATTTTTATTTA 57.874 29.630 0.00 0.00 0.00 1.40
238 239 9.394477 GTTCATATGCCTCCGATTTTTATTTAC 57.606 33.333 0.00 0.00 0.00 2.01
239 240 8.918202 TCATATGCCTCCGATTTTTATTTACT 57.082 30.769 0.00 0.00 0.00 2.24
240 241 8.999431 TCATATGCCTCCGATTTTTATTTACTC 58.001 33.333 0.00 0.00 0.00 2.59
241 242 9.003658 CATATGCCTCCGATTTTTATTTACTCT 57.996 33.333 0.00 0.00 0.00 3.24
242 243 6.677781 TGCCTCCGATTTTTATTTACTCTG 57.322 37.500 0.00 0.00 0.00 3.35
243 244 6.177610 TGCCTCCGATTTTTATTTACTCTGT 58.822 36.000 0.00 0.00 0.00 3.41
244 245 6.657541 TGCCTCCGATTTTTATTTACTCTGTT 59.342 34.615 0.00 0.00 0.00 3.16
245 246 7.825270 TGCCTCCGATTTTTATTTACTCTGTTA 59.175 33.333 0.00 0.00 0.00 2.41
246 247 8.671028 GCCTCCGATTTTTATTTACTCTGTTAA 58.329 33.333 0.00 0.00 0.00 2.01
256 257 8.999905 TTATTTACTCTGTTAAGTTTTGGGGT 57.000 30.769 0.00 0.00 0.00 4.95
257 258 7.907841 ATTTACTCTGTTAAGTTTTGGGGTT 57.092 32.000 0.00 0.00 0.00 4.11
258 259 6.947644 TTACTCTGTTAAGTTTTGGGGTTC 57.052 37.500 0.00 0.00 0.00 3.62
259 260 3.881089 ACTCTGTTAAGTTTTGGGGTTCG 59.119 43.478 0.00 0.00 0.00 3.95
260 261 3.881089 CTCTGTTAAGTTTTGGGGTTCGT 59.119 43.478 0.00 0.00 0.00 3.85
261 262 3.878699 TCTGTTAAGTTTTGGGGTTCGTC 59.121 43.478 0.00 0.00 0.00 4.20
262 263 3.881089 CTGTTAAGTTTTGGGGTTCGTCT 59.119 43.478 0.00 0.00 0.00 4.18
263 264 3.628487 TGTTAAGTTTTGGGGTTCGTCTG 59.372 43.478 0.00 0.00 0.00 3.51
264 265 1.687563 AAGTTTTGGGGTTCGTCTGG 58.312 50.000 0.00 0.00 0.00 3.86
265 266 0.841289 AGTTTTGGGGTTCGTCTGGA 59.159 50.000 0.00 0.00 0.00 3.86
266 267 1.213430 AGTTTTGGGGTTCGTCTGGAA 59.787 47.619 0.00 0.00 0.00 3.53
267 268 2.025898 GTTTTGGGGTTCGTCTGGAAA 58.974 47.619 0.00 0.00 36.14 3.13
268 269 1.682740 TTTGGGGTTCGTCTGGAAAC 58.317 50.000 0.00 0.00 41.86 2.78
269 270 0.533308 TTGGGGTTCGTCTGGAAACG 60.533 55.000 0.00 0.00 43.60 3.60
276 277 2.519377 TCGTCTGGAAACGACATGTT 57.481 45.000 0.00 0.00 46.02 2.71
288 289 4.002906 ACGACATGTTTTTAGAGGAGCA 57.997 40.909 0.00 0.00 0.00 4.26
289 290 4.385825 ACGACATGTTTTTAGAGGAGCAA 58.614 39.130 0.00 0.00 0.00 3.91
290 291 4.819630 ACGACATGTTTTTAGAGGAGCAAA 59.180 37.500 0.00 0.00 0.00 3.68
291 292 5.473504 ACGACATGTTTTTAGAGGAGCAAAT 59.526 36.000 0.00 0.00 0.00 2.32
292 293 5.796935 CGACATGTTTTTAGAGGAGCAAATG 59.203 40.000 0.00 0.00 0.00 2.32
293 294 6.568462 CGACATGTTTTTAGAGGAGCAAATGT 60.568 38.462 0.00 0.00 0.00 2.71
294 295 6.449698 ACATGTTTTTAGAGGAGCAAATGTG 58.550 36.000 0.00 0.00 0.00 3.21
306 307 2.342910 CAAATGTGCTCCTCTGTTGC 57.657 50.000 0.00 0.00 0.00 4.17
307 308 1.884579 CAAATGTGCTCCTCTGTTGCT 59.115 47.619 0.00 0.00 0.00 3.91
308 309 2.283145 AATGTGCTCCTCTGTTGCTT 57.717 45.000 0.00 0.00 0.00 3.91
309 310 3.423539 AATGTGCTCCTCTGTTGCTTA 57.576 42.857 0.00 0.00 0.00 3.09
310 311 2.169832 TGTGCTCCTCTGTTGCTTAC 57.830 50.000 0.00 0.00 0.00 2.34
311 312 1.694150 TGTGCTCCTCTGTTGCTTACT 59.306 47.619 0.00 0.00 0.00 2.24
312 313 2.289072 TGTGCTCCTCTGTTGCTTACTC 60.289 50.000 0.00 0.00 0.00 2.59
313 314 2.028567 GTGCTCCTCTGTTGCTTACTCT 60.029 50.000 0.00 0.00 0.00 3.24
314 315 3.193691 GTGCTCCTCTGTTGCTTACTCTA 59.806 47.826 0.00 0.00 0.00 2.43
315 316 3.832490 TGCTCCTCTGTTGCTTACTCTAA 59.168 43.478 0.00 0.00 0.00 2.10
316 317 4.283467 TGCTCCTCTGTTGCTTACTCTAAA 59.717 41.667 0.00 0.00 0.00 1.85
317 318 5.221641 TGCTCCTCTGTTGCTTACTCTAAAA 60.222 40.000 0.00 0.00 0.00 1.52
318 319 5.877564 GCTCCTCTGTTGCTTACTCTAAAAT 59.122 40.000 0.00 0.00 0.00 1.82
319 320 6.372937 GCTCCTCTGTTGCTTACTCTAAAATT 59.627 38.462 0.00 0.00 0.00 1.82
320 321 7.094592 GCTCCTCTGTTGCTTACTCTAAAATTT 60.095 37.037 0.00 0.00 0.00 1.82
321 322 9.436957 CTCCTCTGTTGCTTACTCTAAAATTTA 57.563 33.333 0.00 0.00 0.00 1.40
322 323 9.436957 TCCTCTGTTGCTTACTCTAAAATTTAG 57.563 33.333 6.42 6.42 0.00 1.85
323 324 9.436957 CCTCTGTTGCTTACTCTAAAATTTAGA 57.563 33.333 14.03 14.03 0.00 2.10
325 326 9.436957 TCTGTTGCTTACTCTAAAATTTAGAGG 57.563 33.333 33.30 22.23 43.93 3.69
326 327 8.561738 TGTTGCTTACTCTAAAATTTAGAGGG 57.438 34.615 33.30 25.44 43.93 4.30
327 328 7.610305 TGTTGCTTACTCTAAAATTTAGAGGGG 59.390 37.037 33.30 25.20 43.93 4.79
328 329 6.120220 TGCTTACTCTAAAATTTAGAGGGGC 58.880 40.000 33.30 30.41 43.93 5.80
329 330 6.120220 GCTTACTCTAAAATTTAGAGGGGCA 58.880 40.000 33.30 19.33 43.93 5.36
330 331 6.261158 GCTTACTCTAAAATTTAGAGGGGCAG 59.739 42.308 33.30 25.15 43.93 4.85
331 332 4.527944 ACTCTAAAATTTAGAGGGGCAGC 58.472 43.478 33.30 0.00 43.93 5.25
332 333 4.228438 ACTCTAAAATTTAGAGGGGCAGCT 59.772 41.667 33.30 16.67 43.93 4.24
333 334 5.428783 ACTCTAAAATTTAGAGGGGCAGCTA 59.571 40.000 33.30 5.75 43.93 3.32
334 335 5.930135 TCTAAAATTTAGAGGGGCAGCTAG 58.070 41.667 11.10 0.00 0.00 3.42
335 336 4.862641 AAAATTTAGAGGGGCAGCTAGA 57.137 40.909 0.00 0.00 0.00 2.43
336 337 4.429854 AAATTTAGAGGGGCAGCTAGAG 57.570 45.455 0.00 0.00 0.00 2.43
337 338 2.848678 TTTAGAGGGGCAGCTAGAGA 57.151 50.000 0.00 0.00 0.00 3.10
338 339 3.336509 TTTAGAGGGGCAGCTAGAGAT 57.663 47.619 0.00 0.00 0.00 2.75
339 340 2.300956 TAGAGGGGCAGCTAGAGATG 57.699 55.000 0.00 0.00 34.00 2.90
340 341 0.264359 AGAGGGGCAGCTAGAGATGT 59.736 55.000 0.00 0.00 33.30 3.06
341 342 0.678950 GAGGGGCAGCTAGAGATGTC 59.321 60.000 0.00 0.00 34.95 3.06
347 348 3.988819 GGCAGCTAGAGATGTCCTAAAG 58.011 50.000 0.00 0.00 33.30 1.85
348 349 3.386402 GGCAGCTAGAGATGTCCTAAAGT 59.614 47.826 0.00 0.00 33.30 2.66
349 350 4.585162 GGCAGCTAGAGATGTCCTAAAGTA 59.415 45.833 0.00 0.00 33.30 2.24
350 351 5.069251 GGCAGCTAGAGATGTCCTAAAGTAA 59.931 44.000 0.00 0.00 33.30 2.24
351 352 6.212955 GCAGCTAGAGATGTCCTAAAGTAAG 58.787 44.000 0.00 0.00 33.30 2.34
352 353 6.183360 GCAGCTAGAGATGTCCTAAAGTAAGT 60.183 42.308 0.00 0.00 33.30 2.24
353 354 7.631811 GCAGCTAGAGATGTCCTAAAGTAAGTT 60.632 40.741 0.00 0.00 33.30 2.66
354 355 7.704472 CAGCTAGAGATGTCCTAAAGTAAGTTG 59.296 40.741 0.00 0.00 0.00 3.16
355 356 6.981559 GCTAGAGATGTCCTAAAGTAAGTTGG 59.018 42.308 0.00 0.00 0.00 3.77
356 357 5.735766 AGAGATGTCCTAAAGTAAGTTGGC 58.264 41.667 0.00 0.00 0.00 4.52
357 358 5.248477 AGAGATGTCCTAAAGTAAGTTGGCA 59.752 40.000 0.00 0.00 0.00 4.92
358 359 5.491982 AGATGTCCTAAAGTAAGTTGGCAG 58.508 41.667 0.00 0.00 0.00 4.85
359 360 3.408634 TGTCCTAAAGTAAGTTGGCAGC 58.591 45.455 0.00 0.00 0.00 5.25
360 361 2.747989 GTCCTAAAGTAAGTTGGCAGCC 59.252 50.000 3.66 3.66 0.00 4.85
361 362 2.642807 TCCTAAAGTAAGTTGGCAGCCT 59.357 45.455 14.15 0.00 0.00 4.58
362 363 3.841845 TCCTAAAGTAAGTTGGCAGCCTA 59.158 43.478 14.15 0.94 0.00 3.93
363 364 4.081087 TCCTAAAGTAAGTTGGCAGCCTAG 60.081 45.833 14.15 2.26 0.00 3.02
364 365 4.081087 CCTAAAGTAAGTTGGCAGCCTAGA 60.081 45.833 14.15 0.00 0.00 2.43
365 366 4.367039 AAAGTAAGTTGGCAGCCTAGAA 57.633 40.909 14.15 0.00 0.00 2.10
366 367 4.367039 AAGTAAGTTGGCAGCCTAGAAA 57.633 40.909 14.15 0.00 0.00 2.52
367 368 4.576330 AGTAAGTTGGCAGCCTAGAAAT 57.424 40.909 14.15 0.00 0.00 2.17
368 369 4.923415 AGTAAGTTGGCAGCCTAGAAATT 58.077 39.130 14.15 6.95 0.00 1.82
369 370 4.944317 AGTAAGTTGGCAGCCTAGAAATTC 59.056 41.667 14.15 0.00 0.00 2.17
370 371 3.728385 AGTTGGCAGCCTAGAAATTCT 57.272 42.857 14.15 0.00 0.00 2.40
371 372 4.844349 AGTTGGCAGCCTAGAAATTCTA 57.156 40.909 14.15 2.44 0.00 2.10
372 373 4.518249 AGTTGGCAGCCTAGAAATTCTAC 58.482 43.478 14.15 0.00 0.00 2.59
373 374 4.226168 AGTTGGCAGCCTAGAAATTCTACT 59.774 41.667 14.15 0.00 0.00 2.57
374 375 4.408182 TGGCAGCCTAGAAATTCTACTC 57.592 45.455 14.15 0.00 0.00 2.59
375 376 3.134804 TGGCAGCCTAGAAATTCTACTCC 59.865 47.826 14.15 1.82 0.00 3.85
376 377 3.389656 GGCAGCCTAGAAATTCTACTCCT 59.610 47.826 3.29 0.00 0.00 3.69
377 378 4.589374 GGCAGCCTAGAAATTCTACTCCTA 59.411 45.833 3.29 0.00 0.00 2.94
378 379 5.510009 GGCAGCCTAGAAATTCTACTCCTAC 60.510 48.000 3.29 0.00 0.00 3.18
379 380 5.069251 GCAGCCTAGAAATTCTACTCCTACA 59.931 44.000 0.00 0.00 0.00 2.74
380 381 6.239458 GCAGCCTAGAAATTCTACTCCTACAT 60.239 42.308 0.00 0.00 0.00 2.29
381 382 7.375053 CAGCCTAGAAATTCTACTCCTACATC 58.625 42.308 0.00 0.00 0.00 3.06
382 383 6.495526 AGCCTAGAAATTCTACTCCTACATCC 59.504 42.308 0.00 0.00 0.00 3.51
383 384 6.495526 GCCTAGAAATTCTACTCCTACATCCT 59.504 42.308 0.00 0.00 0.00 3.24
384 385 7.015779 GCCTAGAAATTCTACTCCTACATCCTT 59.984 40.741 0.00 0.00 0.00 3.36
385 386 8.581578 CCTAGAAATTCTACTCCTACATCCTTC 58.418 40.741 0.00 0.00 0.00 3.46
386 387 7.368198 AGAAATTCTACTCCTACATCCTTCC 57.632 40.000 0.00 0.00 0.00 3.46
387 388 7.136203 AGAAATTCTACTCCTACATCCTTCCT 58.864 38.462 0.00 0.00 0.00 3.36
388 389 6.739331 AATTCTACTCCTACATCCTTCCTG 57.261 41.667 0.00 0.00 0.00 3.86
389 390 3.567397 TCTACTCCTACATCCTTCCTGC 58.433 50.000 0.00 0.00 0.00 4.85
390 391 2.254152 ACTCCTACATCCTTCCTGCA 57.746 50.000 0.00 0.00 0.00 4.41
391 392 2.769209 ACTCCTACATCCTTCCTGCAT 58.231 47.619 0.00 0.00 0.00 3.96
392 393 2.703007 ACTCCTACATCCTTCCTGCATC 59.297 50.000 0.00 0.00 0.00 3.91
393 394 2.702478 CTCCTACATCCTTCCTGCATCA 59.298 50.000 0.00 0.00 0.00 3.07
394 395 3.321039 TCCTACATCCTTCCTGCATCAT 58.679 45.455 0.00 0.00 0.00 2.45
395 396 3.072038 TCCTACATCCTTCCTGCATCATG 59.928 47.826 0.00 0.00 0.00 3.07
396 397 3.181447 CCTACATCCTTCCTGCATCATGT 60.181 47.826 0.00 0.00 0.00 3.21
397 398 2.928334 ACATCCTTCCTGCATCATGTC 58.072 47.619 0.00 0.00 0.00 3.06
398 399 2.240414 ACATCCTTCCTGCATCATGTCA 59.760 45.455 0.00 0.00 0.00 3.58
399 400 3.117625 ACATCCTTCCTGCATCATGTCAT 60.118 43.478 0.00 0.00 0.00 3.06
400 401 3.204306 TCCTTCCTGCATCATGTCATC 57.796 47.619 0.00 0.00 0.00 2.92
401 402 2.506644 TCCTTCCTGCATCATGTCATCA 59.493 45.455 0.00 0.00 0.00 3.07
402 403 3.054213 TCCTTCCTGCATCATGTCATCAA 60.054 43.478 0.00 0.00 0.00 2.57
403 404 3.697542 CCTTCCTGCATCATGTCATCAAA 59.302 43.478 0.00 0.00 0.00 2.69
404 405 4.341235 CCTTCCTGCATCATGTCATCAAAT 59.659 41.667 0.00 0.00 0.00 2.32
405 406 4.911514 TCCTGCATCATGTCATCAAATG 57.088 40.909 0.00 0.00 0.00 2.32
406 407 4.274978 TCCTGCATCATGTCATCAAATGT 58.725 39.130 0.00 0.00 0.00 2.71
407 408 4.707934 TCCTGCATCATGTCATCAAATGTT 59.292 37.500 0.00 0.00 0.00 2.71
408 409 5.887035 TCCTGCATCATGTCATCAAATGTTA 59.113 36.000 0.00 0.00 0.00 2.41
409 410 6.038936 TCCTGCATCATGTCATCAAATGTTAG 59.961 38.462 0.00 0.00 0.00 2.34
410 411 5.584442 TGCATCATGTCATCAAATGTTAGC 58.416 37.500 0.00 0.00 0.00 3.09
411 412 5.358725 TGCATCATGTCATCAAATGTTAGCT 59.641 36.000 0.00 0.00 0.00 3.32
412 413 6.127563 TGCATCATGTCATCAAATGTTAGCTT 60.128 34.615 0.00 0.00 0.00 3.74
413 414 7.067251 TGCATCATGTCATCAAATGTTAGCTTA 59.933 33.333 0.00 0.00 0.00 3.09
414 415 8.080417 GCATCATGTCATCAAATGTTAGCTTAT 58.920 33.333 0.00 0.00 0.00 1.73
420 421 8.773645 TGTCATCAAATGTTAGCTTATATTCCG 58.226 33.333 0.00 0.00 0.00 4.30
421 422 8.988934 GTCATCAAATGTTAGCTTATATTCCGA 58.011 33.333 0.00 0.00 0.00 4.55
422 423 8.988934 TCATCAAATGTTAGCTTATATTCCGAC 58.011 33.333 0.00 0.00 0.00 4.79
423 424 8.773645 CATCAAATGTTAGCTTATATTCCGACA 58.226 33.333 0.00 0.00 0.00 4.35
424 425 8.725405 TCAAATGTTAGCTTATATTCCGACAA 57.275 30.769 0.00 0.00 0.00 3.18
425 426 9.168451 TCAAATGTTAGCTTATATTCCGACAAA 57.832 29.630 0.00 0.00 0.00 2.83
426 427 9.781834 CAAATGTTAGCTTATATTCCGACAAAA 57.218 29.630 0.00 0.00 0.00 2.44
443 444 2.818350 AAAAAGCAAGCATCGCAGC 58.182 47.368 0.00 0.00 33.32 5.25
445 446 0.109412 AAAAGCAAGCATCGCAGCTC 60.109 50.000 6.43 0.00 45.89 4.09
446 447 2.249557 AAAGCAAGCATCGCAGCTCG 62.250 55.000 6.43 0.00 45.89 5.03
447 448 4.233635 GCAAGCATCGCAGCTCGG 62.234 66.667 1.90 0.20 45.89 4.63
448 449 4.233635 CAAGCATCGCAGCTCGGC 62.234 66.667 1.90 0.00 45.89 5.54
449 450 4.765449 AAGCATCGCAGCTCGGCA 62.765 61.111 1.90 0.00 45.89 5.69
450 451 4.765449 AGCATCGCAGCTCGGCAA 62.765 61.111 5.87 0.00 42.18 4.52
451 452 4.233635 GCATCGCAGCTCGGCAAG 62.234 66.667 5.87 0.00 39.05 4.01
452 453 2.816958 CATCGCAGCTCGGCAAGT 60.817 61.111 5.87 0.00 39.05 3.16
453 454 2.510238 ATCGCAGCTCGGCAAGTC 60.510 61.111 5.87 0.00 39.05 3.01
454 455 3.011635 ATCGCAGCTCGGCAAGTCT 62.012 57.895 5.87 0.00 39.05 3.24
455 456 3.485431 CGCAGCTCGGCAAGTCTG 61.485 66.667 0.00 0.00 34.31 3.51
471 472 5.327091 CAAGTCTGCAACGATAGAAATTGG 58.673 41.667 0.00 0.00 41.38 3.16
489 490 9.753674 AGAAATTGGTATGTCCTTTTCATCTAA 57.246 29.630 13.88 0.00 39.34 2.10
492 493 6.942532 TGGTATGTCCTTTTCATCTAATGC 57.057 37.500 0.00 0.00 37.07 3.56
540 541 0.828022 TCACCCGTGACAAGAACAGT 59.172 50.000 0.00 0.00 34.14 3.55
585 586 0.179006 CCAGAGGAGCATTTAGGCCC 60.179 60.000 0.00 0.00 0.00 5.80
730 782 0.541863 GGTGTCACCAGGAGTATGGG 59.458 60.000 17.59 0.00 45.25 4.00
760 821 0.671796 TCGTGCCGTATCACTATGGG 59.328 55.000 0.00 0.00 34.94 4.00
765 835 0.601558 CCGTATCACTATGGGGTCCG 59.398 60.000 0.00 0.00 31.27 4.79
769 839 3.508793 CGTATCACTATGGGGTCCGTTAT 59.491 47.826 0.00 0.00 0.00 1.89
778 848 1.407618 GGGGTCCGTTATTTGCAATCC 59.592 52.381 0.00 0.00 0.00 3.01
800 870 6.746894 TCCTATTGCTAGCTCCCTCTATATT 58.253 40.000 17.23 0.00 0.00 1.28
806 876 7.246171 TGCTAGCTCCCTCTATATTAAAAGG 57.754 40.000 17.23 0.00 0.00 3.11
815 885 6.486993 CCCTCTATATTAAAAGGCCACTCAAC 59.513 42.308 5.01 0.00 0.00 3.18
848 918 4.626172 GGCAGTGTTCTTAGTACTACTTGC 59.374 45.833 0.91 8.21 0.00 4.01
878 948 3.317150 TCGTAGCATCAATAGGCAATCG 58.683 45.455 0.00 0.00 33.96 3.34
880 950 2.645838 AGCATCAATAGGCAATCGGT 57.354 45.000 0.00 0.00 33.96 4.69
897 994 4.471904 TCGGTGCTTCAGAATAATCAGT 57.528 40.909 0.00 0.00 0.00 3.41
936 1033 6.910433 GGCGTCAAGTTATTATAAACATGTGG 59.090 38.462 0.00 0.00 31.67 4.17
977 1074 3.485394 TGCTGGTGTACATGTTTGATGT 58.515 40.909 2.30 0.00 36.13 3.06
1032 1129 7.545362 AATTGAAGTATGTGCACTAGTGATC 57.455 36.000 27.08 17.13 0.00 2.92
1108 1205 7.668492 AGCATTAAGTGGGCTTATACTACTAC 58.332 38.462 0.00 0.00 37.09 2.73
1109 1206 7.289317 AGCATTAAGTGGGCTTATACTACTACA 59.711 37.037 0.00 0.00 37.09 2.74
1110 1207 7.929785 GCATTAAGTGGGCTTATACTACTACAA 59.070 37.037 0.00 0.00 37.09 2.41
1111 1208 9.257651 CATTAAGTGGGCTTATACTACTACAAC 57.742 37.037 0.00 0.00 37.09 3.32
1119 1216 6.183360 GGCTTATACTACTACAACATGGTGGA 60.183 42.308 16.70 5.33 0.00 4.02
1142 1239 1.482182 TGAGCCTGCATACGATGAACT 59.518 47.619 0.00 0.00 0.00 3.01
1180 1277 7.770801 AAAAACATTGGAGCAACTCTAAAAC 57.229 32.000 0.00 0.00 34.82 2.43
1202 1299 2.846206 TCTTCTATGGGATGGTGCTTGT 59.154 45.455 0.00 0.00 0.00 3.16
1422 1540 2.860735 GGATTCTGTGAACTCGGATTCG 59.139 50.000 0.00 0.00 37.82 3.34
2047 2207 1.670406 AGCAAAGCAGCTGACCTCG 60.670 57.895 20.43 1.80 44.66 4.63
3464 3728 5.292765 TCGCTGTTTGGCATAAATTTTTCA 58.707 33.333 0.00 0.00 0.00 2.69
3515 3787 4.764679 AATGTTTGCGCTCAAGACAATA 57.235 36.364 9.73 0.00 33.12 1.90
3656 3928 3.253230 GCATGGGTATGTTGCAAGAAAC 58.747 45.455 0.00 0.00 36.65 2.78
3773 4061 4.615588 TTTTTCATCAAATGACCCCCAC 57.384 40.909 0.00 0.00 39.39 4.61
3812 4114 3.147595 CCCACCGAGCCGATCAGA 61.148 66.667 0.00 0.00 0.00 3.27
3854 4175 4.899239 GATCGCCCTGACGCCCTG 62.899 72.222 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.343821 GCCGTCGTTGTCGCTATTG 59.656 57.895 0.00 0.00 36.96 1.90
1 2 1.808390 GGCCGTCGTTGTCGCTATT 60.808 57.895 0.00 0.00 36.96 1.73
2 3 2.202703 GGCCGTCGTTGTCGCTAT 60.203 61.111 0.00 0.00 36.96 2.97
3 4 4.424566 GGGCCGTCGTTGTCGCTA 62.425 66.667 0.00 0.00 36.96 4.26
13 14 4.851179 GATTGGGTCGGGGCCGTC 62.851 72.222 0.00 0.00 40.74 4.79
15 16 4.189580 ATGATTGGGTCGGGGCCG 62.190 66.667 0.00 0.00 41.35 6.13
16 17 2.203351 GATGATTGGGTCGGGGCC 60.203 66.667 0.00 0.00 0.00 5.80
17 18 2.203351 GGATGATTGGGTCGGGGC 60.203 66.667 0.00 0.00 0.00 5.80
18 19 2.111043 CGGATGATTGGGTCGGGG 59.889 66.667 0.00 0.00 0.00 5.73
19 20 1.069765 CTCGGATGATTGGGTCGGG 59.930 63.158 0.00 0.00 0.00 5.14
20 21 1.069765 CCTCGGATGATTGGGTCGG 59.930 63.158 0.00 0.00 0.00 4.79
21 22 0.178068 AACCTCGGATGATTGGGTCG 59.822 55.000 0.00 0.00 0.00 4.79
22 23 2.017049 CAAACCTCGGATGATTGGGTC 58.983 52.381 0.00 0.00 0.00 4.46
23 24 1.633432 TCAAACCTCGGATGATTGGGT 59.367 47.619 4.08 0.00 0.00 4.51
24 25 2.017049 GTCAAACCTCGGATGATTGGG 58.983 52.381 4.08 0.00 0.00 4.12
25 26 2.017049 GGTCAAACCTCGGATGATTGG 58.983 52.381 4.08 0.00 34.73 3.16
26 27 2.679837 CTGGTCAAACCTCGGATGATTG 59.320 50.000 0.00 0.00 39.58 2.67
27 28 2.571653 TCTGGTCAAACCTCGGATGATT 59.428 45.455 0.00 0.00 39.58 2.57
28 29 2.187958 TCTGGTCAAACCTCGGATGAT 58.812 47.619 0.00 0.00 39.58 2.45
29 30 1.639722 TCTGGTCAAACCTCGGATGA 58.360 50.000 0.00 0.00 39.58 2.92
30 31 2.350522 CTTCTGGTCAAACCTCGGATG 58.649 52.381 0.00 0.00 39.58 3.51
31 32 1.279271 CCTTCTGGTCAAACCTCGGAT 59.721 52.381 0.00 0.00 39.58 4.18
32 33 0.685097 CCTTCTGGTCAAACCTCGGA 59.315 55.000 0.00 0.00 39.58 4.55
33 34 0.321653 CCCTTCTGGTCAAACCTCGG 60.322 60.000 0.00 0.00 39.58 4.63
34 35 0.685097 TCCCTTCTGGTCAAACCTCG 59.315 55.000 0.00 0.00 39.58 4.63
35 36 1.700186 ACTCCCTTCTGGTCAAACCTC 59.300 52.381 0.00 0.00 39.58 3.85
36 37 1.421646 CACTCCCTTCTGGTCAAACCT 59.578 52.381 0.00 0.00 39.58 3.50
37 38 1.545651 CCACTCCCTTCTGGTCAAACC 60.546 57.143 0.00 0.00 39.22 3.27
38 39 1.420138 TCCACTCCCTTCTGGTCAAAC 59.580 52.381 0.00 0.00 34.77 2.93
39 40 1.814429 TCCACTCCCTTCTGGTCAAA 58.186 50.000 0.00 0.00 34.77 2.69
40 41 1.699634 CTTCCACTCCCTTCTGGTCAA 59.300 52.381 0.00 0.00 34.77 3.18
41 42 1.352083 CTTCCACTCCCTTCTGGTCA 58.648 55.000 0.00 0.00 34.77 4.02
42 43 0.615850 CCTTCCACTCCCTTCTGGTC 59.384 60.000 0.00 0.00 34.77 4.02
43 44 1.492993 GCCTTCCACTCCCTTCTGGT 61.493 60.000 0.00 0.00 34.77 4.00
44 45 1.301293 GCCTTCCACTCCCTTCTGG 59.699 63.158 0.00 0.00 0.00 3.86
45 46 1.078848 CGCCTTCCACTCCCTTCTG 60.079 63.158 0.00 0.00 0.00 3.02
46 47 1.128188 AACGCCTTCCACTCCCTTCT 61.128 55.000 0.00 0.00 0.00 2.85
47 48 0.673956 GAACGCCTTCCACTCCCTTC 60.674 60.000 0.00 0.00 0.00 3.46
48 49 1.375326 GAACGCCTTCCACTCCCTT 59.625 57.895 0.00 0.00 0.00 3.95
49 50 2.943978 CGAACGCCTTCCACTCCCT 61.944 63.158 0.00 0.00 0.00 4.20
50 51 2.434359 CGAACGCCTTCCACTCCC 60.434 66.667 0.00 0.00 0.00 4.30
51 52 3.119096 GCGAACGCCTTCCACTCC 61.119 66.667 8.03 0.00 34.56 3.85
52 53 2.357034 TGCGAACGCCTTCCACTC 60.357 61.111 16.27 0.00 41.09 3.51
53 54 1.812686 TACTGCGAACGCCTTCCACT 61.813 55.000 16.27 0.00 41.09 4.00
54 55 1.352156 CTACTGCGAACGCCTTCCAC 61.352 60.000 16.27 0.00 41.09 4.02
55 56 1.080093 CTACTGCGAACGCCTTCCA 60.080 57.895 16.27 0.00 41.09 3.53
56 57 0.802607 CTCTACTGCGAACGCCTTCC 60.803 60.000 16.27 0.00 41.09 3.46
57 58 0.109226 ACTCTACTGCGAACGCCTTC 60.109 55.000 16.27 0.00 41.09 3.46
58 59 0.109226 GACTCTACTGCGAACGCCTT 60.109 55.000 16.27 5.89 41.09 4.35
59 60 1.507174 GACTCTACTGCGAACGCCT 59.493 57.895 16.27 4.44 41.09 5.52
60 61 1.868251 CGACTCTACTGCGAACGCC 60.868 63.158 16.27 0.00 41.09 5.68
61 62 1.868251 CCGACTCTACTGCGAACGC 60.868 63.158 12.33 12.33 42.35 4.84
62 63 0.520827 GTCCGACTCTACTGCGAACG 60.521 60.000 0.00 0.00 0.00 3.95
63 64 0.803740 AGTCCGACTCTACTGCGAAC 59.196 55.000 0.00 0.00 0.00 3.95
64 65 2.277969 CTAGTCCGACTCTACTGCGAA 58.722 52.381 3.74 0.00 0.00 4.70
65 66 1.472904 CCTAGTCCGACTCTACTGCGA 60.473 57.143 3.74 0.00 0.00 5.10
66 67 0.938713 CCTAGTCCGACTCTACTGCG 59.061 60.000 3.74 0.00 0.00 5.18
67 68 2.041251 ACCTAGTCCGACTCTACTGC 57.959 55.000 3.74 0.00 0.00 4.40
68 69 6.506500 TTTAAACCTAGTCCGACTCTACTG 57.493 41.667 3.74 0.00 0.00 2.74
69 70 7.530426 TTTTTAAACCTAGTCCGACTCTACT 57.470 36.000 3.74 0.00 0.00 2.57
129 130 9.111613 TCCGTACAAATTCCGAATATTTTACAT 57.888 29.630 0.00 0.00 0.00 2.29
130 131 8.489990 TCCGTACAAATTCCGAATATTTTACA 57.510 30.769 0.00 0.00 0.00 2.41
131 132 9.940166 ATTCCGTACAAATTCCGAATATTTTAC 57.060 29.630 0.00 0.08 0.00 2.01
132 133 9.938670 CATTCCGTACAAATTCCGAATATTTTA 57.061 29.630 0.00 0.00 0.00 1.52
133 134 8.463607 ACATTCCGTACAAATTCCGAATATTTT 58.536 29.630 0.00 0.00 0.00 1.82
134 135 7.992008 ACATTCCGTACAAATTCCGAATATTT 58.008 30.769 0.00 0.00 0.00 1.40
135 136 7.517734 CGACATTCCGTACAAATTCCGAATATT 60.518 37.037 0.00 0.00 0.00 1.28
136 137 6.073980 CGACATTCCGTACAAATTCCGAATAT 60.074 38.462 0.00 0.00 0.00 1.28
137 138 5.232626 CGACATTCCGTACAAATTCCGAATA 59.767 40.000 0.00 0.00 0.00 1.75
138 139 4.033587 CGACATTCCGTACAAATTCCGAAT 59.966 41.667 0.00 0.00 0.00 3.34
139 140 3.368539 CGACATTCCGTACAAATTCCGAA 59.631 43.478 0.00 0.00 0.00 4.30
140 141 2.924926 CGACATTCCGTACAAATTCCGA 59.075 45.455 0.00 0.00 0.00 4.55
141 142 2.669434 ACGACATTCCGTACAAATTCCG 59.331 45.455 0.00 1.40 41.44 4.30
142 143 4.673534 AACGACATTCCGTACAAATTCC 57.326 40.909 0.00 0.00 42.54 3.01
143 144 7.293018 ACTTAAACGACATTCCGTACAAATTC 58.707 34.615 0.00 0.00 42.54 2.17
144 145 7.193377 ACTTAAACGACATTCCGTACAAATT 57.807 32.000 0.00 0.00 42.54 1.82
145 146 6.790285 ACTTAAACGACATTCCGTACAAAT 57.210 33.333 0.00 0.00 42.54 2.32
146 147 7.384660 ACATACTTAAACGACATTCCGTACAAA 59.615 33.333 0.00 0.00 42.54 2.83
147 148 6.867816 ACATACTTAAACGACATTCCGTACAA 59.132 34.615 0.00 0.00 42.54 2.41
148 149 6.389091 ACATACTTAAACGACATTCCGTACA 58.611 36.000 0.00 0.00 42.54 2.90
149 150 6.875926 ACATACTTAAACGACATTCCGTAC 57.124 37.500 0.00 0.00 42.54 3.67
150 151 7.887996 AAACATACTTAAACGACATTCCGTA 57.112 32.000 0.00 0.00 42.54 4.02
151 152 6.790285 AAACATACTTAAACGACATTCCGT 57.210 33.333 0.00 0.00 45.64 4.69
152 153 9.205916 CATAAAACATACTTAAACGACATTCCG 57.794 33.333 0.00 0.00 0.00 4.30
156 157 9.444600 AGGACATAAAACATACTTAAACGACAT 57.555 29.630 0.00 0.00 0.00 3.06
157 158 8.836268 AGGACATAAAACATACTTAAACGACA 57.164 30.769 0.00 0.00 0.00 4.35
166 167 9.227777 GGTTCAAACTAGGACATAAAACATACT 57.772 33.333 0.00 0.00 0.00 2.12
167 168 9.227777 AGGTTCAAACTAGGACATAAAACATAC 57.772 33.333 0.00 0.00 0.00 2.39
169 170 9.802039 TTAGGTTCAAACTAGGACATAAAACAT 57.198 29.630 0.00 0.00 0.00 2.71
170 171 9.802039 ATTAGGTTCAAACTAGGACATAAAACA 57.198 29.630 0.00 0.00 0.00 2.83
174 175 9.609346 GCTAATTAGGTTCAAACTAGGACATAA 57.391 33.333 14.28 0.00 0.00 1.90
175 176 8.764558 TGCTAATTAGGTTCAAACTAGGACATA 58.235 33.333 14.28 0.00 0.00 2.29
176 177 7.553044 GTGCTAATTAGGTTCAAACTAGGACAT 59.447 37.037 14.28 0.00 0.00 3.06
177 178 6.877322 GTGCTAATTAGGTTCAAACTAGGACA 59.123 38.462 14.28 0.00 0.00 4.02
178 179 6.315642 GGTGCTAATTAGGTTCAAACTAGGAC 59.684 42.308 14.28 0.00 0.00 3.85
179 180 6.013206 TGGTGCTAATTAGGTTCAAACTAGGA 60.013 38.462 14.28 0.00 0.00 2.94
180 181 6.177610 TGGTGCTAATTAGGTTCAAACTAGG 58.822 40.000 14.28 0.00 0.00 3.02
181 182 7.681939 TTGGTGCTAATTAGGTTCAAACTAG 57.318 36.000 14.28 0.00 0.00 2.57
182 183 8.644374 ATTTGGTGCTAATTAGGTTCAAACTA 57.356 30.769 14.28 0.00 0.00 2.24
183 184 6.969993 TTTGGTGCTAATTAGGTTCAAACT 57.030 33.333 14.28 0.00 0.00 2.66
184 185 8.495148 CAAATTTGGTGCTAATTAGGTTCAAAC 58.505 33.333 14.28 2.23 0.00 2.93
185 186 8.207545 ACAAATTTGGTGCTAATTAGGTTCAAA 58.792 29.630 21.74 7.73 0.00 2.69
186 187 7.655328 CACAAATTTGGTGCTAATTAGGTTCAA 59.345 33.333 21.74 0.71 0.00 2.69
187 188 7.151308 CACAAATTTGGTGCTAATTAGGTTCA 58.849 34.615 21.74 1.18 0.00 3.18
188 189 7.151976 ACACAAATTTGGTGCTAATTAGGTTC 58.848 34.615 21.74 0.00 39.87 3.62
189 190 7.061566 ACACAAATTTGGTGCTAATTAGGTT 57.938 32.000 21.74 0.00 39.87 3.50
190 191 6.664428 ACACAAATTTGGTGCTAATTAGGT 57.336 33.333 21.74 0.00 39.87 3.08
191 192 7.151308 TGAACACAAATTTGGTGCTAATTAGG 58.849 34.615 21.74 0.00 39.87 2.69
192 193 8.761575 ATGAACACAAATTTGGTGCTAATTAG 57.238 30.769 21.74 8.20 39.87 1.73
194 195 9.153721 CATATGAACACAAATTTGGTGCTAATT 57.846 29.630 21.74 8.11 39.87 1.40
195 196 7.278424 GCATATGAACACAAATTTGGTGCTAAT 59.722 33.333 21.74 10.04 39.87 1.73
196 197 6.589523 GCATATGAACACAAATTTGGTGCTAA 59.410 34.615 21.74 8.48 39.87 3.09
197 198 6.098679 GCATATGAACACAAATTTGGTGCTA 58.901 36.000 21.74 6.20 39.87 3.49
198 199 4.931002 GCATATGAACACAAATTTGGTGCT 59.069 37.500 21.74 9.23 39.87 4.40
199 200 4.093261 GGCATATGAACACAAATTTGGTGC 59.907 41.667 21.74 14.94 39.87 5.01
200 201 5.481105 AGGCATATGAACACAAATTTGGTG 58.519 37.500 21.74 17.85 41.95 4.17
201 202 5.337491 GGAGGCATATGAACACAAATTTGGT 60.337 40.000 21.74 13.54 0.00 3.67
202 203 5.111293 GGAGGCATATGAACACAAATTTGG 58.889 41.667 21.74 12.94 0.00 3.28
203 204 4.799949 CGGAGGCATATGAACACAAATTTG 59.200 41.667 16.67 16.67 0.00 2.32
204 205 4.704540 TCGGAGGCATATGAACACAAATTT 59.295 37.500 6.97 0.00 0.00 1.82
205 206 4.269183 TCGGAGGCATATGAACACAAATT 58.731 39.130 6.97 0.00 0.00 1.82
206 207 3.884895 TCGGAGGCATATGAACACAAAT 58.115 40.909 6.97 0.00 0.00 2.32
207 208 3.342377 TCGGAGGCATATGAACACAAA 57.658 42.857 6.97 0.00 0.00 2.83
208 209 3.558931 ATCGGAGGCATATGAACACAA 57.441 42.857 6.97 0.00 0.00 3.33
209 210 3.558931 AATCGGAGGCATATGAACACA 57.441 42.857 6.97 0.00 0.00 3.72
210 211 4.900635 AAAATCGGAGGCATATGAACAC 57.099 40.909 6.97 0.00 0.00 3.32
211 212 7.581213 AATAAAAATCGGAGGCATATGAACA 57.419 32.000 6.97 0.00 0.00 3.18
212 213 9.394477 GTAAATAAAAATCGGAGGCATATGAAC 57.606 33.333 6.97 0.00 0.00 3.18
213 214 9.349713 AGTAAATAAAAATCGGAGGCATATGAA 57.650 29.630 6.97 0.00 0.00 2.57
214 215 8.918202 AGTAAATAAAAATCGGAGGCATATGA 57.082 30.769 6.97 0.00 0.00 2.15
215 216 9.003658 AGAGTAAATAAAAATCGGAGGCATATG 57.996 33.333 0.00 0.00 0.00 1.78
216 217 9.003658 CAGAGTAAATAAAAATCGGAGGCATAT 57.996 33.333 0.00 0.00 0.00 1.78
217 218 7.990886 ACAGAGTAAATAAAAATCGGAGGCATA 59.009 33.333 0.00 0.00 0.00 3.14
218 219 6.828785 ACAGAGTAAATAAAAATCGGAGGCAT 59.171 34.615 0.00 0.00 0.00 4.40
219 220 6.177610 ACAGAGTAAATAAAAATCGGAGGCA 58.822 36.000 0.00 0.00 0.00 4.75
220 221 6.679327 ACAGAGTAAATAAAAATCGGAGGC 57.321 37.500 0.00 0.00 0.00 4.70
230 231 9.423964 ACCCCAAAACTTAACAGAGTAAATAAA 57.576 29.630 0.00 0.00 0.00 1.40
231 232 8.999905 ACCCCAAAACTTAACAGAGTAAATAA 57.000 30.769 0.00 0.00 0.00 1.40
232 233 8.999905 AACCCCAAAACTTAACAGAGTAAATA 57.000 30.769 0.00 0.00 0.00 1.40
233 234 7.255346 CGAACCCCAAAACTTAACAGAGTAAAT 60.255 37.037 0.00 0.00 0.00 1.40
234 235 6.038492 CGAACCCCAAAACTTAACAGAGTAAA 59.962 38.462 0.00 0.00 0.00 2.01
235 236 5.528320 CGAACCCCAAAACTTAACAGAGTAA 59.472 40.000 0.00 0.00 0.00 2.24
236 237 5.058490 CGAACCCCAAAACTTAACAGAGTA 58.942 41.667 0.00 0.00 0.00 2.59
237 238 3.881089 CGAACCCCAAAACTTAACAGAGT 59.119 43.478 0.00 0.00 0.00 3.24
238 239 3.881089 ACGAACCCCAAAACTTAACAGAG 59.119 43.478 0.00 0.00 0.00 3.35
239 240 3.878699 GACGAACCCCAAAACTTAACAGA 59.121 43.478 0.00 0.00 0.00 3.41
240 241 3.881089 AGACGAACCCCAAAACTTAACAG 59.119 43.478 0.00 0.00 0.00 3.16
241 242 3.628487 CAGACGAACCCCAAAACTTAACA 59.372 43.478 0.00 0.00 0.00 2.41
242 243 3.004002 CCAGACGAACCCCAAAACTTAAC 59.996 47.826 0.00 0.00 0.00 2.01
243 244 3.117963 TCCAGACGAACCCCAAAACTTAA 60.118 43.478 0.00 0.00 0.00 1.85
244 245 2.438763 TCCAGACGAACCCCAAAACTTA 59.561 45.455 0.00 0.00 0.00 2.24
245 246 1.213430 TCCAGACGAACCCCAAAACTT 59.787 47.619 0.00 0.00 0.00 2.66
246 247 0.841289 TCCAGACGAACCCCAAAACT 59.159 50.000 0.00 0.00 0.00 2.66
247 248 1.682740 TTCCAGACGAACCCCAAAAC 58.317 50.000 0.00 0.00 0.00 2.43
248 249 2.025898 GTTTCCAGACGAACCCCAAAA 58.974 47.619 0.00 0.00 0.00 2.44
249 250 1.682740 GTTTCCAGACGAACCCCAAA 58.317 50.000 0.00 0.00 0.00 3.28
250 251 0.533308 CGTTTCCAGACGAACCCCAA 60.533 55.000 0.00 0.00 45.47 4.12
251 252 1.070105 CGTTTCCAGACGAACCCCA 59.930 57.895 0.00 0.00 45.47 4.96
252 253 3.961729 CGTTTCCAGACGAACCCC 58.038 61.111 0.00 0.00 45.47 4.95
257 258 2.828877 AAACATGTCGTTTCCAGACGA 58.171 42.857 0.00 0.00 44.78 4.20
266 267 4.385825 TGCTCCTCTAAAAACATGTCGTT 58.614 39.130 0.00 0.00 40.50 3.85
267 268 4.002906 TGCTCCTCTAAAAACATGTCGT 57.997 40.909 0.00 0.00 0.00 4.34
268 269 5.356882 TTTGCTCCTCTAAAAACATGTCG 57.643 39.130 0.00 0.00 0.00 4.35
269 270 6.583806 CACATTTGCTCCTCTAAAAACATGTC 59.416 38.462 0.00 0.00 0.00 3.06
270 271 6.449698 CACATTTGCTCCTCTAAAAACATGT 58.550 36.000 0.00 0.00 0.00 3.21
271 272 5.346822 GCACATTTGCTCCTCTAAAAACATG 59.653 40.000 0.00 0.00 46.17 3.21
272 273 5.473039 GCACATTTGCTCCTCTAAAAACAT 58.527 37.500 0.00 0.00 46.17 2.71
273 274 4.870363 GCACATTTGCTCCTCTAAAAACA 58.130 39.130 0.00 0.00 46.17 2.83
287 288 1.884579 AGCAACAGAGGAGCACATTTG 59.115 47.619 0.00 0.00 0.00 2.32
288 289 2.283145 AGCAACAGAGGAGCACATTT 57.717 45.000 0.00 0.00 0.00 2.32
289 290 2.283145 AAGCAACAGAGGAGCACATT 57.717 45.000 0.00 0.00 0.00 2.71
290 291 2.304180 AGTAAGCAACAGAGGAGCACAT 59.696 45.455 0.00 0.00 0.00 3.21
291 292 1.694150 AGTAAGCAACAGAGGAGCACA 59.306 47.619 0.00 0.00 0.00 4.57
292 293 2.028567 AGAGTAAGCAACAGAGGAGCAC 60.029 50.000 0.00 0.00 0.00 4.40
293 294 2.251818 AGAGTAAGCAACAGAGGAGCA 58.748 47.619 0.00 0.00 0.00 4.26
294 295 4.457834 TTAGAGTAAGCAACAGAGGAGC 57.542 45.455 0.00 0.00 0.00 4.70
295 296 7.913674 AATTTTAGAGTAAGCAACAGAGGAG 57.086 36.000 0.00 0.00 0.00 3.69
296 297 9.436957 CTAAATTTTAGAGTAAGCAACAGAGGA 57.563 33.333 10.11 0.00 0.00 3.71
297 298 9.436957 TCTAAATTTTAGAGTAAGCAACAGAGG 57.563 33.333 13.62 0.00 0.00 3.69
299 300 9.436957 CCTCTAAATTTTAGAGTAAGCAACAGA 57.563 33.333 30.52 7.14 39.42 3.41
300 301 8.669243 CCCTCTAAATTTTAGAGTAAGCAACAG 58.331 37.037 30.52 18.45 39.42 3.16
301 302 7.610305 CCCCTCTAAATTTTAGAGTAAGCAACA 59.390 37.037 30.52 6.22 39.42 3.33
302 303 7.415318 GCCCCTCTAAATTTTAGAGTAAGCAAC 60.415 40.741 30.52 16.54 39.42 4.17
303 304 6.602009 GCCCCTCTAAATTTTAGAGTAAGCAA 59.398 38.462 30.52 7.32 39.42 3.91
304 305 6.120220 GCCCCTCTAAATTTTAGAGTAAGCA 58.880 40.000 30.52 7.89 39.42 3.91
305 306 6.120220 TGCCCCTCTAAATTTTAGAGTAAGC 58.880 40.000 30.52 28.17 39.42 3.09
306 307 6.261158 GCTGCCCCTCTAAATTTTAGAGTAAG 59.739 42.308 30.52 24.02 39.42 2.34
307 308 6.069615 AGCTGCCCCTCTAAATTTTAGAGTAA 60.070 38.462 30.52 18.40 39.42 2.24
308 309 5.428783 AGCTGCCCCTCTAAATTTTAGAGTA 59.571 40.000 30.52 18.97 39.42 2.59
309 310 4.228438 AGCTGCCCCTCTAAATTTTAGAGT 59.772 41.667 30.52 16.41 39.42 3.24
310 311 4.786425 AGCTGCCCCTCTAAATTTTAGAG 58.214 43.478 28.15 28.15 40.44 2.43
311 312 4.862641 AGCTGCCCCTCTAAATTTTAGA 57.137 40.909 16.09 16.09 0.00 2.10
312 313 5.930135 TCTAGCTGCCCCTCTAAATTTTAG 58.070 41.667 9.48 9.48 0.00 1.85
313 314 5.665812 TCTCTAGCTGCCCCTCTAAATTTTA 59.334 40.000 0.00 0.00 0.00 1.52
314 315 4.475016 TCTCTAGCTGCCCCTCTAAATTTT 59.525 41.667 0.00 0.00 0.00 1.82
315 316 4.040755 TCTCTAGCTGCCCCTCTAAATTT 58.959 43.478 0.00 0.00 0.00 1.82
316 317 3.658725 TCTCTAGCTGCCCCTCTAAATT 58.341 45.455 0.00 0.00 0.00 1.82
317 318 3.336509 TCTCTAGCTGCCCCTCTAAAT 57.663 47.619 0.00 0.00 0.00 1.40
318 319 2.848678 TCTCTAGCTGCCCCTCTAAA 57.151 50.000 0.00 0.00 0.00 1.85
319 320 2.091055 ACATCTCTAGCTGCCCCTCTAA 60.091 50.000 0.00 0.00 0.00 2.10
320 321 1.501170 ACATCTCTAGCTGCCCCTCTA 59.499 52.381 0.00 0.00 0.00 2.43
321 322 0.264359 ACATCTCTAGCTGCCCCTCT 59.736 55.000 0.00 0.00 0.00 3.69
322 323 0.678950 GACATCTCTAGCTGCCCCTC 59.321 60.000 0.00 0.00 0.00 4.30
323 324 0.762461 GGACATCTCTAGCTGCCCCT 60.762 60.000 0.00 0.00 0.00 4.79
324 325 0.762461 AGGACATCTCTAGCTGCCCC 60.762 60.000 0.00 0.00 0.00 5.80
325 326 2.002505 TAGGACATCTCTAGCTGCCC 57.997 55.000 0.00 0.00 0.00 5.36
326 327 3.386402 ACTTTAGGACATCTCTAGCTGCC 59.614 47.826 0.00 0.00 0.00 4.85
327 328 4.664150 ACTTTAGGACATCTCTAGCTGC 57.336 45.455 0.00 0.00 0.00 5.25
328 329 7.341445 ACTTACTTTAGGACATCTCTAGCTG 57.659 40.000 0.00 0.00 0.00 4.24
329 330 7.147811 CCAACTTACTTTAGGACATCTCTAGCT 60.148 40.741 0.00 0.00 0.00 3.32
330 331 6.981559 CCAACTTACTTTAGGACATCTCTAGC 59.018 42.308 0.00 0.00 0.00 3.42
331 332 6.981559 GCCAACTTACTTTAGGACATCTCTAG 59.018 42.308 0.00 0.00 0.00 2.43
332 333 6.439375 TGCCAACTTACTTTAGGACATCTCTA 59.561 38.462 0.00 0.00 0.00 2.43
333 334 5.248477 TGCCAACTTACTTTAGGACATCTCT 59.752 40.000 0.00 0.00 0.00 3.10
334 335 5.488341 TGCCAACTTACTTTAGGACATCTC 58.512 41.667 0.00 0.00 0.00 2.75
335 336 5.491982 CTGCCAACTTACTTTAGGACATCT 58.508 41.667 0.00 0.00 0.00 2.90
336 337 4.095036 GCTGCCAACTTACTTTAGGACATC 59.905 45.833 0.00 0.00 0.00 3.06
337 338 4.010349 GCTGCCAACTTACTTTAGGACAT 58.990 43.478 0.00 0.00 0.00 3.06
338 339 3.408634 GCTGCCAACTTACTTTAGGACA 58.591 45.455 0.00 0.00 0.00 4.02
339 340 2.747989 GGCTGCCAACTTACTTTAGGAC 59.252 50.000 15.17 0.00 0.00 3.85
340 341 2.642807 AGGCTGCCAACTTACTTTAGGA 59.357 45.455 22.65 0.00 0.00 2.94
341 342 3.073274 AGGCTGCCAACTTACTTTAGG 57.927 47.619 22.65 0.00 0.00 2.69
342 343 5.086104 TCTAGGCTGCCAACTTACTTTAG 57.914 43.478 22.65 10.20 0.00 1.85
343 344 5.492855 TTCTAGGCTGCCAACTTACTTTA 57.507 39.130 22.65 0.00 0.00 1.85
344 345 4.367039 TTCTAGGCTGCCAACTTACTTT 57.633 40.909 22.65 0.00 0.00 2.66
345 346 4.367039 TTTCTAGGCTGCCAACTTACTT 57.633 40.909 22.65 0.00 0.00 2.24
346 347 4.576330 ATTTCTAGGCTGCCAACTTACT 57.424 40.909 22.65 0.00 0.00 2.24
347 348 4.944317 AGAATTTCTAGGCTGCCAACTTAC 59.056 41.667 22.65 5.17 0.00 2.34
348 349 5.179452 AGAATTTCTAGGCTGCCAACTTA 57.821 39.130 22.65 3.15 0.00 2.24
349 350 4.039603 AGAATTTCTAGGCTGCCAACTT 57.960 40.909 22.65 6.98 0.00 2.66
350 351 3.728385 AGAATTTCTAGGCTGCCAACT 57.272 42.857 22.65 2.30 0.00 3.16
351 352 4.518249 AGTAGAATTTCTAGGCTGCCAAC 58.482 43.478 22.65 2.74 28.01 3.77
352 353 4.384208 GGAGTAGAATTTCTAGGCTGCCAA 60.384 45.833 22.65 6.54 28.01 4.52
353 354 3.134804 GGAGTAGAATTTCTAGGCTGCCA 59.865 47.826 22.65 6.04 28.01 4.92
354 355 3.389656 AGGAGTAGAATTTCTAGGCTGCC 59.610 47.826 11.65 11.65 28.01 4.85
355 356 4.681074 AGGAGTAGAATTTCTAGGCTGC 57.319 45.455 6.37 6.86 28.01 5.25
356 357 6.716934 TGTAGGAGTAGAATTTCTAGGCTG 57.283 41.667 6.37 0.00 28.01 4.85
357 358 6.495526 GGATGTAGGAGTAGAATTTCTAGGCT 59.504 42.308 6.37 1.76 28.01 4.58
358 359 6.495526 AGGATGTAGGAGTAGAATTTCTAGGC 59.504 42.308 6.37 2.34 28.01 3.93
359 360 8.485578 AAGGATGTAGGAGTAGAATTTCTAGG 57.514 38.462 6.37 0.00 28.01 3.02
360 361 8.581578 GGAAGGATGTAGGAGTAGAATTTCTAG 58.418 40.741 6.37 0.00 28.01 2.43
361 362 8.290277 AGGAAGGATGTAGGAGTAGAATTTCTA 58.710 37.037 1.90 1.90 0.00 2.10
362 363 7.070571 CAGGAAGGATGTAGGAGTAGAATTTCT 59.929 40.741 4.03 4.03 0.00 2.52
363 364 7.213678 CAGGAAGGATGTAGGAGTAGAATTTC 58.786 42.308 0.00 0.00 0.00 2.17
364 365 6.408662 GCAGGAAGGATGTAGGAGTAGAATTT 60.409 42.308 0.00 0.00 0.00 1.82
365 366 5.071115 GCAGGAAGGATGTAGGAGTAGAATT 59.929 44.000 0.00 0.00 0.00 2.17
366 367 4.591072 GCAGGAAGGATGTAGGAGTAGAAT 59.409 45.833 0.00 0.00 0.00 2.40
367 368 3.961408 GCAGGAAGGATGTAGGAGTAGAA 59.039 47.826 0.00 0.00 0.00 2.10
368 369 3.052869 TGCAGGAAGGATGTAGGAGTAGA 60.053 47.826 0.00 0.00 0.00 2.59
369 370 3.300388 TGCAGGAAGGATGTAGGAGTAG 58.700 50.000 0.00 0.00 0.00 2.57
370 371 3.398318 TGCAGGAAGGATGTAGGAGTA 57.602 47.619 0.00 0.00 0.00 2.59
371 372 2.254152 TGCAGGAAGGATGTAGGAGT 57.746 50.000 0.00 0.00 0.00 3.85
372 373 2.702478 TGATGCAGGAAGGATGTAGGAG 59.298 50.000 0.00 0.00 0.00 3.69
373 374 2.763039 TGATGCAGGAAGGATGTAGGA 58.237 47.619 0.00 0.00 0.00 2.94
374 375 3.181447 ACATGATGCAGGAAGGATGTAGG 60.181 47.826 0.00 0.00 0.00 3.18
375 376 4.063689 GACATGATGCAGGAAGGATGTAG 58.936 47.826 0.00 0.00 0.00 2.74
376 377 3.455543 TGACATGATGCAGGAAGGATGTA 59.544 43.478 0.00 0.00 0.00 2.29
377 378 2.240414 TGACATGATGCAGGAAGGATGT 59.760 45.455 0.00 0.00 0.00 3.06
378 379 2.927028 TGACATGATGCAGGAAGGATG 58.073 47.619 0.00 0.00 0.00 3.51
379 380 3.137728 TGATGACATGATGCAGGAAGGAT 59.862 43.478 0.00 0.00 0.00 3.24
380 381 2.506644 TGATGACATGATGCAGGAAGGA 59.493 45.455 0.00 0.00 0.00 3.36
381 382 2.927028 TGATGACATGATGCAGGAAGG 58.073 47.619 0.00 0.00 0.00 3.46
382 383 4.976224 TTTGATGACATGATGCAGGAAG 57.024 40.909 0.00 0.00 0.00 3.46
383 384 4.707934 ACATTTGATGACATGATGCAGGAA 59.292 37.500 0.00 0.00 0.00 3.36
384 385 4.274978 ACATTTGATGACATGATGCAGGA 58.725 39.130 0.00 0.00 0.00 3.86
385 386 4.649088 ACATTTGATGACATGATGCAGG 57.351 40.909 0.00 0.00 0.00 4.85
386 387 5.685954 GCTAACATTTGATGACATGATGCAG 59.314 40.000 0.00 0.00 0.00 4.41
387 388 5.358725 AGCTAACATTTGATGACATGATGCA 59.641 36.000 0.00 0.00 0.00 3.96
388 389 5.828747 AGCTAACATTTGATGACATGATGC 58.171 37.500 0.00 0.00 0.00 3.91
394 395 8.773645 CGGAATATAAGCTAACATTTGATGACA 58.226 33.333 0.00 0.00 0.00 3.58
395 396 8.988934 TCGGAATATAAGCTAACATTTGATGAC 58.011 33.333 0.00 0.00 0.00 3.06
396 397 8.988934 GTCGGAATATAAGCTAACATTTGATGA 58.011 33.333 0.00 0.00 0.00 2.92
397 398 8.773645 TGTCGGAATATAAGCTAACATTTGATG 58.226 33.333 0.00 0.00 0.00 3.07
398 399 8.902540 TGTCGGAATATAAGCTAACATTTGAT 57.097 30.769 0.00 0.00 0.00 2.57
399 400 8.725405 TTGTCGGAATATAAGCTAACATTTGA 57.275 30.769 0.00 0.00 0.00 2.69
400 401 9.781834 TTTTGTCGGAATATAAGCTAACATTTG 57.218 29.630 0.00 0.00 0.00 2.32
425 426 0.316204 AGCTGCGATGCTTGCTTTTT 59.684 45.000 0.00 0.00 40.93 1.94
426 427 0.109412 GAGCTGCGATGCTTGCTTTT 60.109 50.000 0.00 0.00 44.17 2.27
427 428 1.505353 GAGCTGCGATGCTTGCTTT 59.495 52.632 0.00 0.00 44.17 3.51
428 429 2.747822 CGAGCTGCGATGCTTGCTT 61.748 57.895 0.00 0.00 44.17 3.91
429 430 3.193614 CGAGCTGCGATGCTTGCT 61.194 61.111 0.00 8.95 44.17 3.91
430 431 4.233635 CCGAGCTGCGATGCTTGC 62.234 66.667 10.64 0.00 44.17 4.01
431 432 4.233635 GCCGAGCTGCGATGCTTG 62.234 66.667 0.00 9.51 44.17 4.01
432 433 4.765449 TGCCGAGCTGCGATGCTT 62.765 61.111 0.00 0.00 44.17 3.91
434 435 4.233635 CTTGCCGAGCTGCGATGC 62.234 66.667 0.00 0.00 44.57 3.91
435 436 2.806856 GACTTGCCGAGCTGCGATG 61.807 63.158 0.00 0.00 44.57 3.84
436 437 2.510238 GACTTGCCGAGCTGCGAT 60.510 61.111 0.00 0.00 44.57 4.58
437 438 3.684990 AGACTTGCCGAGCTGCGA 61.685 61.111 0.00 0.00 44.57 5.10
438 439 3.485431 CAGACTTGCCGAGCTGCG 61.485 66.667 0.00 0.00 40.47 5.18
439 440 3.797546 GCAGACTTGCCGAGCTGC 61.798 66.667 11.05 11.05 44.74 5.25
448 449 5.106555 ACCAATTTCTATCGTTGCAGACTTG 60.107 40.000 0.00 0.00 0.00 3.16
449 450 5.003804 ACCAATTTCTATCGTTGCAGACTT 58.996 37.500 0.00 0.00 0.00 3.01
450 451 4.579869 ACCAATTTCTATCGTTGCAGACT 58.420 39.130 0.00 0.00 0.00 3.24
451 452 4.946784 ACCAATTTCTATCGTTGCAGAC 57.053 40.909 0.00 0.00 0.00 3.51
452 453 6.112734 ACATACCAATTTCTATCGTTGCAGA 58.887 36.000 0.00 0.00 0.00 4.26
453 454 6.363577 ACATACCAATTTCTATCGTTGCAG 57.636 37.500 0.00 0.00 0.00 4.41
454 455 5.295787 GGACATACCAATTTCTATCGTTGCA 59.704 40.000 0.00 0.00 38.79 4.08
455 456 5.527582 AGGACATACCAATTTCTATCGTTGC 59.472 40.000 0.00 0.00 42.04 4.17
456 457 7.553881 AAGGACATACCAATTTCTATCGTTG 57.446 36.000 0.00 0.00 42.04 4.10
457 458 8.575649 AAAAGGACATACCAATTTCTATCGTT 57.424 30.769 0.00 0.00 42.04 3.85
458 459 7.827236 TGAAAAGGACATACCAATTTCTATCGT 59.173 33.333 0.00 0.00 42.21 3.73
459 460 8.208718 TGAAAAGGACATACCAATTTCTATCG 57.791 34.615 0.00 0.00 42.21 2.92
461 462 9.927081 AGATGAAAAGGACATACCAATTTCTAT 57.073 29.630 0.00 0.00 42.21 1.98
463 464 9.753674 TTAGATGAAAAGGACATACCAATTTCT 57.246 29.630 0.00 0.00 42.21 2.52
466 467 8.416329 GCATTAGATGAAAAGGACATACCAATT 58.584 33.333 0.00 0.00 42.04 2.32
467 468 7.560991 TGCATTAGATGAAAAGGACATACCAAT 59.439 33.333 0.00 0.00 42.04 3.16
468 469 6.889177 TGCATTAGATGAAAAGGACATACCAA 59.111 34.615 0.00 0.00 42.04 3.67
469 470 6.422333 TGCATTAGATGAAAAGGACATACCA 58.578 36.000 0.00 0.00 42.04 3.25
470 471 6.942532 TGCATTAGATGAAAAGGACATACC 57.057 37.500 0.00 0.00 39.35 2.73
471 472 8.158169 TCATGCATTAGATGAAAAGGACATAC 57.842 34.615 0.00 0.00 0.00 2.39
490 491 9.181061 CCTGAAATATGAATATGGTATCATGCA 57.819 33.333 0.00 0.00 36.93 3.96
491 492 9.399797 TCCTGAAATATGAATATGGTATCATGC 57.600 33.333 0.00 0.00 36.93 4.06
585 586 1.002868 CAGTCCACTCCAGCCAAGG 60.003 63.158 0.00 0.00 0.00 3.61
651 652 0.037882 CCATGCTAGCGATCCGATGT 60.038 55.000 10.77 0.00 0.00 3.06
684 712 6.003950 AGATAATGACCGGACAAATATTGGG 58.996 40.000 9.46 0.00 34.12 4.12
691 728 3.517901 ACCTCAGATAATGACCGGACAAA 59.482 43.478 9.46 0.79 33.22 2.83
749 801 5.743714 GCAAATAACGGACCCCATAGTGATA 60.744 44.000 0.00 0.00 0.00 2.15
760 821 5.519722 CAATAGGATTGCAAATAACGGACC 58.480 41.667 1.71 0.00 0.00 4.46
800 870 3.745799 TCAATCGTTGAGTGGCCTTTTA 58.254 40.909 3.32 0.00 34.08 1.52
815 885 2.086869 AGAACACTGCCCATTCAATCG 58.913 47.619 0.00 0.00 0.00 3.34
878 948 7.377766 TGTTTACTGATTATTCTGAAGCACC 57.622 36.000 0.00 0.00 0.00 5.01
880 950 8.846943 TCTTGTTTACTGATTATTCTGAAGCA 57.153 30.769 0.00 0.00 0.00 3.91
890 960 7.653647 ACGCCAAAATTCTTGTTTACTGATTA 58.346 30.769 0.00 0.00 0.00 1.75
897 994 5.897050 ACTTGACGCCAAAATTCTTGTTTA 58.103 33.333 0.00 0.00 0.00 2.01
936 1033 3.336468 CATCCCTAGAGCAGCAATCATC 58.664 50.000 0.00 0.00 0.00 2.92
977 1074 5.241662 TCGTTGATGGTTCATGTTCATGTA 58.758 37.500 11.73 0.92 0.00 2.29
991 1088 7.868775 ACTTCAATTATGATCATCGTTGATGG 58.131 34.615 28.77 24.38 42.73 3.51
1032 1129 5.794687 TCTGTAAGTTGCCAAATGATACG 57.205 39.130 0.00 0.00 33.76 3.06
1108 1205 0.883833 GGCTCACTTCCACCATGTTG 59.116 55.000 0.00 0.00 0.00 3.33
1109 1206 0.773644 AGGCTCACTTCCACCATGTT 59.226 50.000 0.00 0.00 0.00 2.71
1110 1207 0.037303 CAGGCTCACTTCCACCATGT 59.963 55.000 0.00 0.00 0.00 3.21
1111 1208 1.310933 GCAGGCTCACTTCCACCATG 61.311 60.000 0.00 0.00 0.00 3.66
1119 1216 1.482182 TCATCGTATGCAGGCTCACTT 59.518 47.619 0.00 0.00 0.00 3.16
1165 1262 6.536941 CCATAGAAGAGTTTTAGAGTTGCTCC 59.463 42.308 0.00 0.00 0.00 4.70
1171 1268 6.674419 ACCATCCCATAGAAGAGTTTTAGAGT 59.326 38.462 0.00 0.00 0.00 3.24
1180 1277 3.118112 ACAAGCACCATCCCATAGAAGAG 60.118 47.826 0.00 0.00 0.00 2.85
1202 1299 4.038763 CCACGGCATAGAGTATTCCTTGTA 59.961 45.833 0.00 0.00 0.00 2.41
1422 1540 1.424493 CGGCGAGCTGATTCTTGGAC 61.424 60.000 0.00 0.00 0.00 4.02
2047 2207 5.601662 TGTGAATCTTATGATCTTCGGGAC 58.398 41.667 0.00 0.00 31.51 4.46
3031 3242 2.096980 TGTATGACTTGCTCGAGTACCG 59.903 50.000 15.13 5.89 40.25 4.02
3390 3638 5.703978 AATCATCCACAACATTGTTTCGA 57.296 34.783 0.00 0.00 39.91 3.71
3656 3928 6.463995 AGGAGTAGAGATTTTGCACTAGAG 57.536 41.667 0.00 0.00 0.00 2.43
3853 4174 2.363975 GGTACTGGGATGGGCGTCA 61.364 63.158 0.00 0.00 0.00 4.35
3854 4175 2.504519 GGTACTGGGATGGGCGTC 59.495 66.667 0.00 0.00 0.00 5.19
3855 4176 3.087906 GGGTACTGGGATGGGCGT 61.088 66.667 0.00 0.00 0.00 5.68
3856 4177 3.873812 GGGGTACTGGGATGGGCG 61.874 72.222 0.00 0.00 0.00 6.13
3857 4178 3.873812 CGGGGTACTGGGATGGGC 61.874 72.222 0.00 0.00 0.00 5.36
3858 4179 3.873812 GCGGGGTACTGGGATGGG 61.874 72.222 0.00 0.00 0.00 4.00
3859 4180 2.768344 AGCGGGGTACTGGGATGG 60.768 66.667 0.00 0.00 0.00 3.51
3860 4181 2.505982 CAGCGGGGTACTGGGATG 59.494 66.667 0.00 0.00 0.00 3.51
3934 4324 2.260434 GGCGCTGTGGAGTCGTTA 59.740 61.111 7.64 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.