Multiple sequence alignment - TraesCS2D01G134300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G134300 chr2D 100.000 4312 0 0 1 4312 79084094 79088405 0.000000e+00 7963.0
1 TraesCS2D01G134300 chr2D 83.025 866 94 27 789 1621 33165458 33164613 0.000000e+00 736.0
2 TraesCS2D01G134300 chr2D 84.143 782 89 16 791 1566 33315527 33314775 0.000000e+00 725.0
3 TraesCS2D01G134300 chr2D 83.398 771 96 21 811 1566 33374315 33373562 0.000000e+00 686.0
4 TraesCS2D01G134300 chr2D 84.500 600 66 11 941 1536 32992857 32992281 6.260000e-158 568.0
5 TraesCS2D01G134300 chr2D 78.541 713 114 29 2978 3672 33163543 33162852 2.380000e-117 433.0
6 TraesCS2D01G134300 chr2D 86.375 389 50 1 1155 1540 33049299 33048911 5.160000e-114 422.0
7 TraesCS2D01G134300 chr2D 75.803 872 135 47 3045 3859 33313703 33312851 5.270000e-99 372.0
8 TraesCS2D01G134300 chr2D 79.386 456 64 21 1994 2426 33314585 33314137 1.170000e-75 294.0
9 TraesCS2D01G134300 chr2D 78.422 431 70 13 1901 2310 33241439 33241011 4.280000e-65 259.0
10 TraesCS2D01G134300 chr2D 86.010 193 21 5 3484 3672 33046703 33046513 7.310000e-48 202.0
11 TraesCS2D01G134300 chr2D 81.690 142 17 7 3725 3859 33239127 33238988 4.560000e-20 110.0
12 TraesCS2D01G134300 chr2D 87.755 98 4 6 3895 3987 145889550 145889644 1.640000e-19 108.0
13 TraesCS2D01G134300 chr2D 89.655 87 4 2 3896 3977 70263796 70263710 5.900000e-19 106.0
14 TraesCS2D01G134300 chr2D 100.000 31 0 0 3783 3813 33239157 33239127 1.670000e-04 58.4
15 TraesCS2D01G134300 chr2A 91.906 1952 83 19 789 2680 79342315 79344251 0.000000e+00 2660.0
16 TraesCS2D01G134300 chr2A 94.607 1131 49 6 2777 3898 79344374 79345501 0.000000e+00 1740.0
17 TraesCS2D01G134300 chr2A 85.791 746 73 14 854 1592 36235669 36234950 0.000000e+00 760.0
18 TraesCS2D01G134300 chr2A 81.439 792 86 39 789 1566 36392800 36392056 3.710000e-165 592.0
19 TraesCS2D01G134300 chr2A 92.969 256 11 5 3976 4225 79345500 79345754 2.450000e-97 366.0
20 TraesCS2D01G134300 chr2A 76.030 801 119 45 3096 3844 36390920 36390141 8.870000e-92 348.0
21 TraesCS2D01G134300 chr2A 79.710 483 77 17 2962 3426 36410258 36409779 3.210000e-86 329.0
22 TraesCS2D01G134300 chr2A 82.126 414 39 11 1182 1592 36190406 36190025 5.380000e-84 322.0
23 TraesCS2D01G134300 chr2A 80.925 346 56 4 1994 2329 36399398 36399053 9.190000e-67 265.0
24 TraesCS2D01G134300 chr2A 81.595 326 44 10 1994 2304 36391918 36391594 5.530000e-64 255.0
25 TraesCS2D01G134300 chr2A 95.294 85 4 0 4228 4312 79345798 79345882 7.520000e-28 135.0
26 TraesCS2D01G134300 chr2B 95.276 1630 68 5 789 2411 122992195 122993822 0.000000e+00 2575.0
27 TraesCS2D01G134300 chr2B 95.171 1636 64 6 789 2411 122926390 122928023 0.000000e+00 2569.0
28 TraesCS2D01G134300 chr2B 91.770 1130 66 10 2777 3884 122928495 122929619 0.000000e+00 1546.0
29 TraesCS2D01G134300 chr2B 83.212 822 80 28 789 1592 54787472 54786691 0.000000e+00 701.0
30 TraesCS2D01G134300 chr2B 80.837 908 122 33 811 1699 55203674 55202800 0.000000e+00 665.0
31 TraesCS2D01G134300 chr2B 94.057 387 21 2 2777 3162 122994273 122994658 1.730000e-163 586.0
32 TraesCS2D01G134300 chr2B 94.057 387 19 4 2777 3161 172722671 172723055 6.210000e-163 584.0
33 TraesCS2D01G134300 chr2B 89.462 446 30 8 2339 2775 172722202 172722639 8.150000e-152 547.0
34 TraesCS2D01G134300 chr2B 88.614 404 19 4 2397 2774 122993838 122994240 2.350000e-127 466.0
35 TraesCS2D01G134300 chr2B 86.375 389 50 1 1155 1540 54887927 54887539 5.160000e-114 422.0
36 TraesCS2D01G134300 chr2B 88.732 355 20 5 3160 3514 122994750 122995084 2.400000e-112 416.0
37 TraesCS2D01G134300 chr2B 86.772 378 30 9 789 1165 55227648 55227290 1.870000e-108 403.0
38 TraesCS2D01G134300 chr2B 80.447 537 73 19 2927 3441 55224778 55224252 8.750000e-102 381.0
39 TraesCS2D01G134300 chr2B 89.320 309 26 6 492 795 122926047 122926353 8.750000e-102 381.0
40 TraesCS2D01G134300 chr2B 91.288 264 6 4 3627 3882 122995126 122995380 1.150000e-90 344.0
41 TraesCS2D01G134300 chr2B 87.234 282 26 3 2503 2774 122928181 122928462 3.240000e-81 313.0
42 TraesCS2D01G134300 chr2B 79.574 470 68 16 2962 3411 55854325 55853864 1.160000e-80 311.0
43 TraesCS2D01G134300 chr2B 79.195 447 68 15 2982 3411 55226034 55225596 1.960000e-73 287.0
44 TraesCS2D01G134300 chr2B 81.232 341 56 5 1993 2329 55209553 55209217 7.110000e-68 268.0
45 TraesCS2D01G134300 chr2B 78.571 434 62 24 1901 2313 55513998 55513575 1.540000e-64 257.0
46 TraesCS2D01G134300 chr2B 96.000 75 3 0 308 382 122925925 122925999 5.860000e-24 122.0
47 TraesCS2D01G134300 chr2B 76.172 256 43 16 3606 3846 55512321 55512069 7.570000e-23 119.0
48 TraesCS2D01G134300 chr2B 91.463 82 7 0 312 393 122991889 122991970 3.520000e-21 113.0
49 TraesCS2D01G134300 chr2B 87.755 98 4 6 3895 3987 206113852 206113946 1.640000e-19 108.0
50 TraesCS2D01G134300 chr2B 89.394 66 7 0 3794 3859 55201144 55201079 2.760000e-12 84.2
51 TraesCS2D01G134300 chrUn 95.597 318 13 1 2779 3096 38525037 38524721 3.850000e-140 508.0
52 TraesCS2D01G134300 chrUn 86.154 130 7 5 2668 2788 38529635 38529508 3.500000e-26 130.0
53 TraesCS2D01G134300 chrUn 88.034 117 5 3 2668 2775 239264922 239265038 3.500000e-26 130.0
54 TraesCS2D01G134300 chr3B 95.597 318 13 1 2779 3096 34594315 34593999 3.850000e-140 508.0
55 TraesCS2D01G134300 chr3B 83.129 326 42 12 3458 3781 229464026 229464340 7.060000e-73 285.0
56 TraesCS2D01G134300 chr3B 86.154 130 7 5 2668 2788 34599720 34599593 3.500000e-26 130.0
57 TraesCS2D01G134300 chr1B 96.053 304 12 0 2777 3080 67349412 67349715 3.000000e-136 496.0
58 TraesCS2D01G134300 chr1B 90.756 119 3 3 2668 2778 67349265 67349383 7.470000e-33 152.0
59 TraesCS2D01G134300 chr7B 75.069 726 111 41 2777 3441 31442163 31441447 1.530000e-69 274.0
60 TraesCS2D01G134300 chr7D 73.865 727 120 43 2777 3441 82447338 82446620 4.340000e-55 226.0
61 TraesCS2D01G134300 chr6B 77.591 357 55 17 3065 3416 56427163 56427499 4.400000e-45 193.0
62 TraesCS2D01G134300 chr6D 84.302 172 19 4 2503 2668 30575708 30575539 1.240000e-35 161.0
63 TraesCS2D01G134300 chr6D 83.333 144 20 4 3162 3304 30748348 30748488 3.500000e-26 130.0
64 TraesCS2D01G134300 chr6D 92.135 89 2 2 3894 3977 84938455 84938543 2.110000e-23 121.0
65 TraesCS2D01G134300 chr6D 91.860 86 2 2 3897 3977 84938543 84938458 9.800000e-22 115.0
66 TraesCS2D01G134300 chr6A 77.574 272 33 13 3162 3423 31881587 31881840 5.810000e-29 139.0
67 TraesCS2D01G134300 chr6A 77.679 224 26 17 2776 2979 561452100 561452319 9.800000e-22 115.0
68 TraesCS2D01G134300 chr6A 75.549 319 33 26 2776 3053 561588538 561588224 9.800000e-22 115.0
69 TraesCS2D01G134300 chr6A 89.535 86 3 2 3897 3977 446759341 446759425 2.120000e-18 104.0
70 TraesCS2D01G134300 chr7A 79.798 198 28 4 3160 3345 84245844 84245647 2.710000e-27 134.0
71 TraesCS2D01G134300 chr7A 87.500 96 5 4 3897 3987 408058838 408058745 2.120000e-18 104.0
72 TraesCS2D01G134300 chr4A 90.698 86 3 1 3897 3977 164523161 164523076 4.560000e-20 110.0
73 TraesCS2D01G134300 chr4A 83.178 107 15 2 2559 2664 444118527 444118423 1.280000e-15 95.3
74 TraesCS2D01G134300 chr1A 85.417 96 12 2 3891 3986 42109942 42110035 9.870000e-17 99.0
75 TraesCS2D01G134300 chr5D 82.051 117 18 2 2549 2664 197752424 197752538 3.550000e-16 97.1
76 TraesCS2D01G134300 chr3D 81.982 111 17 2 2555 2664 551677428 551677320 1.650000e-14 91.6
77 TraesCS2D01G134300 chr3A 81.982 111 17 2 2555 2664 496376866 496376758 1.650000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G134300 chr2D 79084094 79088405 4311 False 7963.000000 7963 100.000000 1 4312 1 chr2D.!!$F1 4311
1 TraesCS2D01G134300 chr2D 33373562 33374315 753 True 686.000000 686 83.398000 811 1566 1 chr2D.!!$R2 755
2 TraesCS2D01G134300 chr2D 33162852 33165458 2606 True 584.500000 736 80.783000 789 3672 2 chr2D.!!$R5 2883
3 TraesCS2D01G134300 chr2D 32992281 32992857 576 True 568.000000 568 84.500000 941 1536 1 chr2D.!!$R1 595
4 TraesCS2D01G134300 chr2D 33312851 33315527 2676 True 463.666667 725 79.777333 791 3859 3 chr2D.!!$R7 3068
5 TraesCS2D01G134300 chr2D 33046513 33049299 2786 True 312.000000 422 86.192500 1155 3672 2 chr2D.!!$R4 2517
6 TraesCS2D01G134300 chr2A 79342315 79345882 3567 False 1225.250000 2660 93.694000 789 4312 4 chr2A.!!$F1 3523
7 TraesCS2D01G134300 chr2A 36234950 36235669 719 True 760.000000 760 85.791000 854 1592 1 chr2A.!!$R2 738
8 TraesCS2D01G134300 chr2A 36390141 36392800 2659 True 398.333333 592 79.688000 789 3844 3 chr2A.!!$R5 3055
9 TraesCS2D01G134300 chr2B 122925925 122929619 3694 False 986.200000 2569 91.899000 308 3884 5 chr2B.!!$F2 3576
10 TraesCS2D01G134300 chr2B 122991889 122995380 3491 False 750.000000 2575 91.571667 312 3882 6 chr2B.!!$F3 3570
11 TraesCS2D01G134300 chr2B 54786691 54787472 781 True 701.000000 701 83.212000 789 1592 1 chr2B.!!$R1 803
12 TraesCS2D01G134300 chr2B 172722202 172723055 853 False 565.500000 584 91.759500 2339 3161 2 chr2B.!!$F4 822
13 TraesCS2D01G134300 chr2B 55201079 55203674 2595 True 374.600000 665 85.115500 811 3859 2 chr2B.!!$R5 3048
14 TraesCS2D01G134300 chr2B 55224252 55227648 3396 True 357.000000 403 82.138000 789 3441 3 chr2B.!!$R6 2652
15 TraesCS2D01G134300 chr7B 31441447 31442163 716 True 274.000000 274 75.069000 2777 3441 1 chr7B.!!$R1 664
16 TraesCS2D01G134300 chr7D 82446620 82447338 718 True 226.000000 226 73.865000 2777 3441 1 chr7D.!!$R1 664


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.033601 AGTGGAGGCAACACAAACCA 60.034 50.0 12.94 0.0 41.21 3.67 F
551 564 0.036952 CTGATCTGGTCGTGGTTGCT 60.037 55.0 0.00 0.0 0.00 3.91 F
1543 1699 0.108804 GCTTCCGGTGAGTTCGATCA 60.109 55.0 0.00 0.0 0.00 2.92 F
1829 2021 0.619255 TCGCCATGACCCCCTTCTTA 60.619 55.0 0.00 0.0 0.00 2.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1982 2369 1.671054 CCGGCTCCGTGAACATGTT 60.671 57.895 11.78 11.78 37.81 2.71 R
2545 4355 2.420687 CCCACCATCCTCTCTGTTAAGC 60.421 54.545 0.00 0.00 0.00 3.09 R
2925 5081 0.328258 AAGTCCACATGCCACCTACC 59.672 55.000 0.00 0.00 0.00 3.18 R
3548 5902 1.271108 TGTCTACGAAGCCATGGCAAA 60.271 47.619 37.18 16.53 44.88 3.68 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.094762 ACGATTAGTGGAGGCAACAC 57.905 50.000 3.71 3.71 39.10 3.32
20 21 1.346395 ACGATTAGTGGAGGCAACACA 59.654 47.619 12.94 0.00 41.21 3.72
21 22 2.224426 ACGATTAGTGGAGGCAACACAA 60.224 45.455 12.94 6.63 41.21 3.33
22 23 2.811431 CGATTAGTGGAGGCAACACAAA 59.189 45.455 12.94 0.00 41.21 2.83
23 24 3.364964 CGATTAGTGGAGGCAACACAAAC 60.365 47.826 12.94 4.91 41.21 2.93
24 25 1.975660 TAGTGGAGGCAACACAAACC 58.024 50.000 12.94 0.00 41.21 3.27
25 26 0.033601 AGTGGAGGCAACACAAACCA 60.034 50.000 12.94 0.00 41.21 3.67
26 27 0.820871 GTGGAGGCAACACAAACCAA 59.179 50.000 6.69 0.00 38.67 3.67
27 28 1.412343 GTGGAGGCAACACAAACCAAT 59.588 47.619 6.69 0.00 38.67 3.16
28 29 1.686052 TGGAGGCAACACAAACCAATC 59.314 47.619 0.00 0.00 41.41 2.67
29 30 1.335872 GGAGGCAACACAAACCAATCG 60.336 52.381 0.00 0.00 41.41 3.34
30 31 1.606668 GAGGCAACACAAACCAATCGA 59.393 47.619 0.00 0.00 41.41 3.59
31 32 1.336755 AGGCAACACAAACCAATCGAC 59.663 47.619 0.00 0.00 41.41 4.20
32 33 1.066303 GGCAACACAAACCAATCGACA 59.934 47.619 0.00 0.00 0.00 4.35
33 34 2.288152 GGCAACACAAACCAATCGACAT 60.288 45.455 0.00 0.00 0.00 3.06
34 35 3.057876 GGCAACACAAACCAATCGACATA 60.058 43.478 0.00 0.00 0.00 2.29
35 36 3.911964 GCAACACAAACCAATCGACATAC 59.088 43.478 0.00 0.00 0.00 2.39
36 37 4.148166 CAACACAAACCAATCGACATACG 58.852 43.478 0.00 0.00 44.09 3.06
37 38 2.739913 ACACAAACCAATCGACATACGG 59.260 45.455 0.00 0.00 42.82 4.02
38 39 2.095213 CACAAACCAATCGACATACGGG 59.905 50.000 0.00 0.00 42.82 5.28
39 40 2.289819 ACAAACCAATCGACATACGGGT 60.290 45.455 0.00 0.00 42.82 5.28
40 41 2.018542 AACCAATCGACATACGGGTG 57.981 50.000 0.00 0.00 42.82 4.61
41 42 0.177141 ACCAATCGACATACGGGTGG 59.823 55.000 0.00 0.00 45.16 4.61
42 43 0.462375 CCAATCGACATACGGGTGGA 59.538 55.000 0.00 0.00 43.68 4.02
43 44 1.134640 CCAATCGACATACGGGTGGAA 60.135 52.381 0.00 0.00 43.68 3.53
44 45 2.623535 CAATCGACATACGGGTGGAAA 58.376 47.619 0.00 0.00 42.82 3.13
45 46 3.202906 CAATCGACATACGGGTGGAAAT 58.797 45.455 0.00 0.00 42.82 2.17
46 47 3.553828 ATCGACATACGGGTGGAAATT 57.446 42.857 0.00 0.00 42.82 1.82
47 48 4.675976 ATCGACATACGGGTGGAAATTA 57.324 40.909 0.00 0.00 42.82 1.40
48 49 4.468765 TCGACATACGGGTGGAAATTAA 57.531 40.909 0.00 0.00 42.82 1.40
49 50 4.183101 TCGACATACGGGTGGAAATTAAC 58.817 43.478 0.00 0.00 42.82 2.01
50 51 4.081531 TCGACATACGGGTGGAAATTAACT 60.082 41.667 0.00 0.00 42.82 2.24
51 52 4.632688 CGACATACGGGTGGAAATTAACTT 59.367 41.667 0.00 0.00 38.46 2.66
52 53 5.220529 CGACATACGGGTGGAAATTAACTTC 60.221 44.000 0.00 0.00 38.46 3.01
53 54 4.632688 ACATACGGGTGGAAATTAACTTCG 59.367 41.667 0.00 0.00 0.00 3.79
54 55 1.808343 ACGGGTGGAAATTAACTTCGC 59.192 47.619 0.00 0.00 0.00 4.70
55 56 1.201987 CGGGTGGAAATTAACTTCGCG 60.202 52.381 0.00 0.00 0.00 5.87
56 57 2.078392 GGGTGGAAATTAACTTCGCGA 58.922 47.619 3.71 3.71 0.00 5.87
57 58 2.159612 GGGTGGAAATTAACTTCGCGAC 60.160 50.000 9.15 0.00 0.00 5.19
58 59 2.473376 GGTGGAAATTAACTTCGCGACG 60.473 50.000 9.15 10.49 0.00 5.12
59 60 1.727880 TGGAAATTAACTTCGCGACGG 59.272 47.619 17.46 11.77 0.00 4.79
60 61 1.728425 GGAAATTAACTTCGCGACGGT 59.272 47.619 17.46 13.35 0.00 4.83
61 62 2.473376 GGAAATTAACTTCGCGACGGTG 60.473 50.000 14.09 4.79 0.00 4.94
62 63 0.441145 AATTAACTTCGCGACGGTGC 59.559 50.000 14.09 0.00 0.00 5.01
63 64 1.356527 ATTAACTTCGCGACGGTGCC 61.357 55.000 14.09 0.00 0.00 5.01
64 65 2.424705 TTAACTTCGCGACGGTGCCT 62.425 55.000 14.09 1.79 0.00 4.75
65 66 2.807631 TAACTTCGCGACGGTGCCTC 62.808 60.000 14.09 0.00 0.00 4.70
75 76 3.643398 GGTGCCTCCGATAACCCT 58.357 61.111 0.00 0.00 0.00 4.34
76 77 2.830475 GGTGCCTCCGATAACCCTA 58.170 57.895 0.00 0.00 0.00 3.53
77 78 0.680061 GGTGCCTCCGATAACCCTAG 59.320 60.000 0.00 0.00 0.00 3.02
78 79 0.680061 GTGCCTCCGATAACCCTAGG 59.320 60.000 0.06 0.06 0.00 3.02
79 80 1.672320 GCCTCCGATAACCCTAGGC 59.328 63.158 2.05 0.00 45.37 3.93
80 81 3.143010 CCTCCGATAACCCTAGGCA 57.857 57.895 2.05 0.00 0.00 4.75
81 82 1.645710 CCTCCGATAACCCTAGGCAT 58.354 55.000 2.05 0.00 0.00 4.40
82 83 1.550976 CCTCCGATAACCCTAGGCATC 59.449 57.143 2.05 4.81 0.00 3.91
83 84 2.248248 CTCCGATAACCCTAGGCATCA 58.752 52.381 2.05 0.00 0.00 3.07
84 85 2.834549 CTCCGATAACCCTAGGCATCAT 59.165 50.000 2.05 0.00 0.00 2.45
85 86 4.023980 CTCCGATAACCCTAGGCATCATA 58.976 47.826 2.05 0.00 0.00 2.15
86 87 3.767673 TCCGATAACCCTAGGCATCATAC 59.232 47.826 2.05 0.00 0.00 2.39
87 88 3.428999 CCGATAACCCTAGGCATCATACG 60.429 52.174 2.05 2.93 0.00 3.06
88 89 3.442625 CGATAACCCTAGGCATCATACGA 59.557 47.826 2.05 0.00 0.00 3.43
89 90 4.674623 CGATAACCCTAGGCATCATACGAC 60.675 50.000 2.05 0.00 0.00 4.34
90 91 2.383442 ACCCTAGGCATCATACGACT 57.617 50.000 2.05 0.00 0.00 4.18
91 92 1.964223 ACCCTAGGCATCATACGACTG 59.036 52.381 2.05 0.00 0.00 3.51
92 93 2.239400 CCCTAGGCATCATACGACTGA 58.761 52.381 2.05 0.00 0.00 3.41
93 94 2.628178 CCCTAGGCATCATACGACTGAA 59.372 50.000 2.05 0.00 0.00 3.02
94 95 3.259374 CCCTAGGCATCATACGACTGAAT 59.741 47.826 2.05 0.00 0.00 2.57
95 96 4.262635 CCCTAGGCATCATACGACTGAATT 60.263 45.833 2.05 0.00 0.00 2.17
96 97 4.687948 CCTAGGCATCATACGACTGAATTG 59.312 45.833 0.00 0.00 0.00 2.32
97 98 4.142609 AGGCATCATACGACTGAATTGT 57.857 40.909 0.00 0.00 0.00 2.71
98 99 4.517285 AGGCATCATACGACTGAATTGTT 58.483 39.130 0.00 0.00 0.00 2.83
99 100 4.943705 AGGCATCATACGACTGAATTGTTT 59.056 37.500 0.00 0.00 0.00 2.83
100 101 6.112734 AGGCATCATACGACTGAATTGTTTA 58.887 36.000 0.00 0.00 0.00 2.01
101 102 6.258727 AGGCATCATACGACTGAATTGTTTAG 59.741 38.462 0.00 0.00 0.00 1.85
102 103 5.904080 GCATCATACGACTGAATTGTTTAGC 59.096 40.000 0.00 0.00 0.00 3.09
103 104 6.238211 GCATCATACGACTGAATTGTTTAGCT 60.238 38.462 0.00 0.00 0.00 3.32
104 105 6.647212 TCATACGACTGAATTGTTTAGCTG 57.353 37.500 0.00 0.00 0.00 4.24
105 106 6.394809 TCATACGACTGAATTGTTTAGCTGA 58.605 36.000 0.00 0.00 0.00 4.26
106 107 6.531594 TCATACGACTGAATTGTTTAGCTGAG 59.468 38.462 0.00 0.00 0.00 3.35
107 108 3.433615 ACGACTGAATTGTTTAGCTGAGC 59.566 43.478 0.00 0.00 0.00 4.26
108 109 3.433274 CGACTGAATTGTTTAGCTGAGCA 59.567 43.478 7.39 0.00 0.00 4.26
109 110 4.093998 CGACTGAATTGTTTAGCTGAGCAT 59.906 41.667 7.39 0.00 0.00 3.79
110 111 5.291858 CGACTGAATTGTTTAGCTGAGCATA 59.708 40.000 7.39 0.00 0.00 3.14
111 112 6.509199 CGACTGAATTGTTTAGCTGAGCATAG 60.509 42.308 7.39 0.00 0.00 2.23
112 113 6.409704 ACTGAATTGTTTAGCTGAGCATAGA 58.590 36.000 7.39 0.00 0.00 1.98
113 114 6.314896 ACTGAATTGTTTAGCTGAGCATAGAC 59.685 38.462 7.39 2.72 0.00 2.59
114 115 6.172630 TGAATTGTTTAGCTGAGCATAGACA 58.827 36.000 7.39 5.31 0.00 3.41
115 116 6.654582 TGAATTGTTTAGCTGAGCATAGACAA 59.345 34.615 7.39 13.39 0.00 3.18
116 117 7.174772 TGAATTGTTTAGCTGAGCATAGACAAA 59.825 33.333 17.09 5.68 30.68 2.83
117 118 6.875948 TTGTTTAGCTGAGCATAGACAAAA 57.124 33.333 7.39 0.00 0.00 2.44
118 119 6.875948 TGTTTAGCTGAGCATAGACAAAAA 57.124 33.333 7.39 0.00 0.00 1.94
119 120 7.452880 TGTTTAGCTGAGCATAGACAAAAAT 57.547 32.000 7.39 0.00 0.00 1.82
120 121 7.307694 TGTTTAGCTGAGCATAGACAAAAATG 58.692 34.615 7.39 0.00 0.00 2.32
121 122 7.174772 TGTTTAGCTGAGCATAGACAAAAATGA 59.825 33.333 7.39 0.00 0.00 2.57
122 123 7.686438 TTAGCTGAGCATAGACAAAAATGAA 57.314 32.000 7.39 0.00 0.00 2.57
123 124 6.579666 AGCTGAGCATAGACAAAAATGAAA 57.420 33.333 7.39 0.00 0.00 2.69
124 125 6.985117 AGCTGAGCATAGACAAAAATGAAAA 58.015 32.000 7.39 0.00 0.00 2.29
125 126 7.088905 AGCTGAGCATAGACAAAAATGAAAAG 58.911 34.615 7.39 0.00 0.00 2.27
126 127 6.865205 GCTGAGCATAGACAAAAATGAAAAGT 59.135 34.615 0.00 0.00 0.00 2.66
127 128 7.383300 GCTGAGCATAGACAAAAATGAAAAGTT 59.617 33.333 0.00 0.00 0.00 2.66
128 129 9.897744 CTGAGCATAGACAAAAATGAAAAGTTA 57.102 29.630 0.00 0.00 0.00 2.24
136 137 9.883142 AGACAAAAATGAAAAGTTAATGTTGGA 57.117 25.926 0.00 0.00 0.00 3.53
142 143 9.454859 AAATGAAAAGTTAATGTTGGAAAACCA 57.545 25.926 0.00 0.00 0.00 3.67
143 144 9.454859 AATGAAAAGTTAATGTTGGAAAACCAA 57.545 25.926 0.00 0.00 0.00 3.67
144 145 8.848474 TGAAAAGTTAATGTTGGAAAACCAAA 57.152 26.923 3.20 0.00 0.00 3.28
145 146 9.284968 TGAAAAGTTAATGTTGGAAAACCAAAA 57.715 25.926 3.20 0.00 0.00 2.44
146 147 9.767684 GAAAAGTTAATGTTGGAAAACCAAAAG 57.232 29.630 3.20 0.00 0.00 2.27
147 148 9.508642 AAAAGTTAATGTTGGAAAACCAAAAGA 57.491 25.926 3.20 0.00 0.00 2.52
148 149 9.679661 AAAGTTAATGTTGGAAAACCAAAAGAT 57.320 25.926 3.20 0.00 0.00 2.40
150 151 9.758651 AGTTAATGTTGGAAAACCAAAAGATAC 57.241 29.630 3.20 1.34 0.00 2.24
151 152 9.535878 GTTAATGTTGGAAAACCAAAAGATACA 57.464 29.630 3.20 0.00 0.00 2.29
153 154 8.831715 AATGTTGGAAAACCAAAAGATACATC 57.168 30.769 3.20 0.00 0.00 3.06
154 155 7.353414 TGTTGGAAAACCAAAAGATACATCA 57.647 32.000 3.20 0.00 0.00 3.07
155 156 7.786030 TGTTGGAAAACCAAAAGATACATCAA 58.214 30.769 3.20 0.00 0.00 2.57
156 157 7.708752 TGTTGGAAAACCAAAAGATACATCAAC 59.291 33.333 3.20 0.00 0.00 3.18
157 158 6.754193 TGGAAAACCAAAAGATACATCAACC 58.246 36.000 0.00 0.00 0.00 3.77
158 159 6.163476 GGAAAACCAAAAGATACATCAACCC 58.837 40.000 0.00 0.00 0.00 4.11
159 160 5.385509 AAACCAAAAGATACATCAACCCG 57.614 39.130 0.00 0.00 0.00 5.28
160 161 3.352648 ACCAAAAGATACATCAACCCGG 58.647 45.455 0.00 0.00 0.00 5.73
161 162 2.687935 CCAAAAGATACATCAACCCGGG 59.312 50.000 22.25 22.25 0.00 5.73
162 163 3.616219 CAAAAGATACATCAACCCGGGA 58.384 45.455 32.02 4.68 0.00 5.14
163 164 3.277142 AAAGATACATCAACCCGGGAC 57.723 47.619 32.02 6.41 0.00 4.46
164 165 1.874129 AGATACATCAACCCGGGACA 58.126 50.000 32.02 10.79 0.00 4.02
165 166 1.485066 AGATACATCAACCCGGGACAC 59.515 52.381 32.02 7.48 0.00 3.67
166 167 0.544697 ATACATCAACCCGGGACACC 59.455 55.000 32.02 0.00 0.00 4.16
177 178 2.491291 GGGACACCGTCTCTCTACC 58.509 63.158 0.00 0.00 32.47 3.18
178 179 1.036481 GGGACACCGTCTCTCTACCC 61.036 65.000 0.00 0.00 32.47 3.69
179 180 1.036481 GGACACCGTCTCTCTACCCC 61.036 65.000 0.00 0.00 32.47 4.95
180 181 1.000107 ACACCGTCTCTCTACCCCC 60.000 63.158 0.00 0.00 0.00 5.40
181 182 1.000019 CACCGTCTCTCTACCCCCA 60.000 63.158 0.00 0.00 0.00 4.96
182 183 1.038130 CACCGTCTCTCTACCCCCAG 61.038 65.000 0.00 0.00 0.00 4.45
183 184 2.128507 CCGTCTCTCTACCCCCAGC 61.129 68.421 0.00 0.00 0.00 4.85
184 185 2.128507 CGTCTCTCTACCCCCAGCC 61.129 68.421 0.00 0.00 0.00 4.85
185 186 1.311747 GTCTCTCTACCCCCAGCCT 59.688 63.158 0.00 0.00 0.00 4.58
186 187 0.325765 GTCTCTCTACCCCCAGCCTT 60.326 60.000 0.00 0.00 0.00 4.35
187 188 0.417841 TCTCTCTACCCCCAGCCTTT 59.582 55.000 0.00 0.00 0.00 3.11
188 189 0.833949 CTCTCTACCCCCAGCCTTTC 59.166 60.000 0.00 0.00 0.00 2.62
189 190 0.118346 TCTCTACCCCCAGCCTTTCA 59.882 55.000 0.00 0.00 0.00 2.69
190 191 0.253327 CTCTACCCCCAGCCTTTCAC 59.747 60.000 0.00 0.00 0.00 3.18
191 192 0.474854 TCTACCCCCAGCCTTTCACA 60.475 55.000 0.00 0.00 0.00 3.58
192 193 0.322546 CTACCCCCAGCCTTTCACAC 60.323 60.000 0.00 0.00 0.00 3.82
193 194 1.063070 TACCCCCAGCCTTTCACACA 61.063 55.000 0.00 0.00 0.00 3.72
194 195 1.077265 CCCCCAGCCTTTCACACAT 59.923 57.895 0.00 0.00 0.00 3.21
195 196 0.967380 CCCCCAGCCTTTCACACATC 60.967 60.000 0.00 0.00 0.00 3.06
196 197 0.251297 CCCCAGCCTTTCACACATCA 60.251 55.000 0.00 0.00 0.00 3.07
197 198 1.171308 CCCAGCCTTTCACACATCAG 58.829 55.000 0.00 0.00 0.00 2.90
198 199 0.524862 CCAGCCTTTCACACATCAGC 59.475 55.000 0.00 0.00 0.00 4.26
199 200 1.531423 CAGCCTTTCACACATCAGCT 58.469 50.000 0.00 0.00 0.00 4.24
200 201 1.884579 CAGCCTTTCACACATCAGCTT 59.115 47.619 0.00 0.00 0.00 3.74
201 202 2.295349 CAGCCTTTCACACATCAGCTTT 59.705 45.455 0.00 0.00 0.00 3.51
202 203 2.555757 AGCCTTTCACACATCAGCTTTC 59.444 45.455 0.00 0.00 0.00 2.62
203 204 2.352127 GCCTTTCACACATCAGCTTTCC 60.352 50.000 0.00 0.00 0.00 3.13
204 205 3.152341 CCTTTCACACATCAGCTTTCCT 58.848 45.455 0.00 0.00 0.00 3.36
205 206 3.571401 CCTTTCACACATCAGCTTTCCTT 59.429 43.478 0.00 0.00 0.00 3.36
206 207 4.320788 CCTTTCACACATCAGCTTTCCTTC 60.321 45.833 0.00 0.00 0.00 3.46
207 208 3.490439 TCACACATCAGCTTTCCTTCA 57.510 42.857 0.00 0.00 0.00 3.02
208 209 3.141398 TCACACATCAGCTTTCCTTCAC 58.859 45.455 0.00 0.00 0.00 3.18
209 210 2.227388 CACACATCAGCTTTCCTTCACC 59.773 50.000 0.00 0.00 0.00 4.02
210 211 1.466167 CACATCAGCTTTCCTTCACCG 59.534 52.381 0.00 0.00 0.00 4.94
211 212 0.449388 CATCAGCTTTCCTTCACCGC 59.551 55.000 0.00 0.00 0.00 5.68
212 213 0.326264 ATCAGCTTTCCTTCACCGCT 59.674 50.000 0.00 0.00 0.00 5.52
213 214 0.108585 TCAGCTTTCCTTCACCGCTT 59.891 50.000 0.00 0.00 0.00 4.68
214 215 0.954452 CAGCTTTCCTTCACCGCTTT 59.046 50.000 0.00 0.00 0.00 3.51
215 216 0.954452 AGCTTTCCTTCACCGCTTTG 59.046 50.000 0.00 0.00 0.00 2.77
216 217 0.039165 GCTTTCCTTCACCGCTTTGG 60.039 55.000 0.00 0.00 46.41 3.28
228 229 1.937899 CCGCTTTGGTAGGATTTACCG 59.062 52.381 0.00 0.00 44.74 4.02
229 230 2.419021 CCGCTTTGGTAGGATTTACCGA 60.419 50.000 0.00 0.00 44.74 4.69
230 231 2.606272 CGCTTTGGTAGGATTTACCGAC 59.394 50.000 0.00 0.00 44.74 4.79
231 232 3.602483 GCTTTGGTAGGATTTACCGACA 58.398 45.455 0.00 0.00 44.32 4.35
232 233 3.373130 GCTTTGGTAGGATTTACCGACAC 59.627 47.826 0.00 0.00 44.32 3.67
233 234 4.828829 CTTTGGTAGGATTTACCGACACT 58.171 43.478 0.00 0.00 44.32 3.55
234 235 3.880047 TGGTAGGATTTACCGACACTG 57.120 47.619 0.00 0.00 44.32 3.66
235 236 3.167485 TGGTAGGATTTACCGACACTGT 58.833 45.455 0.00 0.00 44.32 3.55
236 237 3.579586 TGGTAGGATTTACCGACACTGTT 59.420 43.478 0.00 0.00 44.32 3.16
237 238 4.040706 TGGTAGGATTTACCGACACTGTTT 59.959 41.667 0.00 0.00 44.32 2.83
238 239 4.999311 GGTAGGATTTACCGACACTGTTTT 59.001 41.667 0.00 0.00 44.32 2.43
239 240 5.106830 GGTAGGATTTACCGACACTGTTTTG 60.107 44.000 0.00 0.00 44.32 2.44
240 241 4.710324 AGGATTTACCGACACTGTTTTGA 58.290 39.130 0.00 0.00 44.74 2.69
241 242 5.127491 AGGATTTACCGACACTGTTTTGAA 58.873 37.500 0.00 0.00 44.74 2.69
242 243 5.768164 AGGATTTACCGACACTGTTTTGAAT 59.232 36.000 0.00 0.00 44.74 2.57
243 244 6.938030 AGGATTTACCGACACTGTTTTGAATA 59.062 34.615 0.00 0.00 44.74 1.75
244 245 7.119262 AGGATTTACCGACACTGTTTTGAATAG 59.881 37.037 0.00 0.00 44.74 1.73
245 246 5.600908 TTACCGACACTGTTTTGAATAGC 57.399 39.130 0.00 0.00 0.00 2.97
246 247 3.740115 ACCGACACTGTTTTGAATAGCT 58.260 40.909 0.00 0.00 0.00 3.32
247 248 4.134563 ACCGACACTGTTTTGAATAGCTT 58.865 39.130 0.00 0.00 0.00 3.74
248 249 5.302360 ACCGACACTGTTTTGAATAGCTTA 58.698 37.500 0.00 0.00 0.00 3.09
249 250 5.178809 ACCGACACTGTTTTGAATAGCTTAC 59.821 40.000 0.00 0.00 0.00 2.34
250 251 5.178623 CCGACACTGTTTTGAATAGCTTACA 59.821 40.000 0.00 0.00 0.00 2.41
251 252 6.128282 CCGACACTGTTTTGAATAGCTTACAT 60.128 38.462 0.00 0.00 0.00 2.29
252 253 6.738200 CGACACTGTTTTGAATAGCTTACATG 59.262 38.462 0.00 0.00 0.00 3.21
253 254 7.360017 CGACACTGTTTTGAATAGCTTACATGA 60.360 37.037 0.00 0.00 0.00 3.07
254 255 7.810658 ACACTGTTTTGAATAGCTTACATGAG 58.189 34.615 0.00 0.00 0.00 2.90
255 256 7.445402 ACACTGTTTTGAATAGCTTACATGAGT 59.555 33.333 0.00 0.00 0.00 3.41
256 257 8.935844 CACTGTTTTGAATAGCTTACATGAGTA 58.064 33.333 0.00 0.00 0.00 2.59
257 258 8.936864 ACTGTTTTGAATAGCTTACATGAGTAC 58.063 33.333 0.00 0.00 0.00 2.73
258 259 8.263940 TGTTTTGAATAGCTTACATGAGTACC 57.736 34.615 0.00 0.00 0.00 3.34
259 260 7.335924 TGTTTTGAATAGCTTACATGAGTACCC 59.664 37.037 0.00 0.00 0.00 3.69
260 261 5.546621 TGAATAGCTTACATGAGTACCCC 57.453 43.478 0.00 0.00 0.00 4.95
261 262 4.966168 TGAATAGCTTACATGAGTACCCCA 59.034 41.667 0.00 0.00 0.00 4.96
262 263 5.606749 TGAATAGCTTACATGAGTACCCCAT 59.393 40.000 0.00 0.00 0.00 4.00
263 264 5.746990 ATAGCTTACATGAGTACCCCATC 57.253 43.478 0.00 0.00 0.00 3.51
264 265 2.706190 AGCTTACATGAGTACCCCATCC 59.294 50.000 0.00 0.00 0.00 3.51
265 266 2.706190 GCTTACATGAGTACCCCATCCT 59.294 50.000 0.00 0.00 0.00 3.24
266 267 3.495100 GCTTACATGAGTACCCCATCCTG 60.495 52.174 0.00 0.00 0.00 3.86
267 268 1.511613 ACATGAGTACCCCATCCTGG 58.488 55.000 0.00 0.00 37.25 4.45
280 281 3.759581 CCATCCTGGGACCATAAGATTG 58.240 50.000 0.00 0.00 32.67 2.67
281 282 3.139025 CCATCCTGGGACCATAAGATTGT 59.861 47.826 0.00 0.00 32.67 2.71
282 283 4.386761 CCATCCTGGGACCATAAGATTGTT 60.387 45.833 0.00 0.00 32.67 2.83
283 284 4.235079 TCCTGGGACCATAAGATTGTTG 57.765 45.455 0.00 0.00 0.00 3.33
284 285 3.053693 TCCTGGGACCATAAGATTGTTGG 60.054 47.826 0.00 0.00 36.56 3.77
285 286 3.290710 CTGGGACCATAAGATTGTTGGG 58.709 50.000 0.00 0.00 34.72 4.12
286 287 2.922955 TGGGACCATAAGATTGTTGGGA 59.077 45.455 0.00 0.00 34.72 4.37
287 288 3.288092 GGGACCATAAGATTGTTGGGAC 58.712 50.000 0.00 0.00 34.72 4.46
288 289 3.053619 GGGACCATAAGATTGTTGGGACT 60.054 47.826 0.00 0.00 34.72 3.85
289 290 4.569865 GGGACCATAAGATTGTTGGGACTT 60.570 45.833 0.00 0.00 34.72 3.01
290 291 4.640647 GGACCATAAGATTGTTGGGACTTC 59.359 45.833 0.00 0.00 34.72 3.01
291 292 5.501156 GACCATAAGATTGTTGGGACTTCT 58.499 41.667 0.00 0.00 34.72 2.85
292 293 5.892348 ACCATAAGATTGTTGGGACTTCTT 58.108 37.500 0.00 0.00 35.03 2.52
293 294 6.314917 ACCATAAGATTGTTGGGACTTCTTT 58.685 36.000 0.00 0.00 33.75 2.52
294 295 6.782494 ACCATAAGATTGTTGGGACTTCTTTT 59.218 34.615 0.00 0.00 33.75 2.27
295 296 7.092716 CCATAAGATTGTTGGGACTTCTTTTG 58.907 38.462 0.00 0.00 33.75 2.44
296 297 5.535753 AAGATTGTTGGGACTTCTTTTGG 57.464 39.130 0.00 0.00 30.12 3.28
297 298 3.321968 AGATTGTTGGGACTTCTTTTGGC 59.678 43.478 0.00 0.00 0.00 4.52
298 299 2.452600 TGTTGGGACTTCTTTTGGCT 57.547 45.000 0.00 0.00 0.00 4.75
299 300 2.031120 TGTTGGGACTTCTTTTGGCTG 58.969 47.619 0.00 0.00 0.00 4.85
300 301 1.341209 GTTGGGACTTCTTTTGGCTGG 59.659 52.381 0.00 0.00 0.00 4.85
301 302 0.827507 TGGGACTTCTTTTGGCTGGC 60.828 55.000 0.00 0.00 0.00 4.85
302 303 0.827507 GGGACTTCTTTTGGCTGGCA 60.828 55.000 0.00 0.00 0.00 4.92
303 304 1.039856 GGACTTCTTTTGGCTGGCAA 58.960 50.000 13.06 13.06 0.00 4.52
304 305 1.620323 GGACTTCTTTTGGCTGGCAAT 59.380 47.619 17.75 1.04 0.00 3.56
305 306 2.611224 GGACTTCTTTTGGCTGGCAATG 60.611 50.000 17.75 13.17 0.00 2.82
306 307 1.270465 ACTTCTTTTGGCTGGCAATGC 60.270 47.619 17.75 0.00 0.00 3.56
332 333 5.754890 AGGACACAATTTTCAAACAATCTGC 59.245 36.000 0.00 0.00 0.00 4.26
344 345 4.627611 AACAATCTGCATATCACACAGC 57.372 40.909 0.00 0.00 0.00 4.40
419 432 4.866224 CGGCACACCACCACCACA 62.866 66.667 0.00 0.00 34.57 4.17
420 433 2.441164 GGCACACCACCACCACAA 60.441 61.111 0.00 0.00 35.26 3.33
421 434 2.489275 GGCACACCACCACCACAAG 61.489 63.158 0.00 0.00 35.26 3.16
422 435 2.489275 GCACACCACCACCACAAGG 61.489 63.158 0.00 0.00 42.21 3.61
432 445 4.263572 CCACAAGGTGCCACCCGA 62.264 66.667 11.06 0.00 39.75 5.14
433 446 2.669569 CACAAGGTGCCACCCGAG 60.670 66.667 11.06 3.09 39.75 4.63
434 447 4.643387 ACAAGGTGCCACCCGAGC 62.643 66.667 11.06 0.00 39.75 5.03
435 448 4.641645 CAAGGTGCCACCCGAGCA 62.642 66.667 11.06 0.00 39.75 4.26
440 453 2.124109 TGCCACCCGAGCACAAAA 60.124 55.556 0.00 0.00 34.69 2.44
441 454 2.335011 GCCACCCGAGCACAAAAC 59.665 61.111 0.00 0.00 0.00 2.43
442 455 2.485795 GCCACCCGAGCACAAAACA 61.486 57.895 0.00 0.00 0.00 2.83
443 456 1.358759 CCACCCGAGCACAAAACAC 59.641 57.895 0.00 0.00 0.00 3.32
446 459 1.101049 ACCCGAGCACAAAACACAGG 61.101 55.000 0.00 0.00 0.00 4.00
462 475 0.740149 CAGGAGCACAGCAAACACAA 59.260 50.000 0.00 0.00 0.00 3.33
467 480 1.147557 GCACAGCAAACACAACAGGC 61.148 55.000 0.00 0.00 0.00 4.85
471 484 0.675633 AGCAAACACAACAGGCCATC 59.324 50.000 5.01 0.00 0.00 3.51
472 485 0.388659 GCAAACACAACAGGCCATCA 59.611 50.000 5.01 0.00 0.00 3.07
473 486 1.603678 GCAAACACAACAGGCCATCAG 60.604 52.381 5.01 0.00 0.00 2.90
474 487 1.955778 CAAACACAACAGGCCATCAGA 59.044 47.619 5.01 0.00 0.00 3.27
475 488 2.361757 CAAACACAACAGGCCATCAGAA 59.638 45.455 5.01 0.00 0.00 3.02
476 489 1.609208 ACACAACAGGCCATCAGAAC 58.391 50.000 5.01 0.00 0.00 3.01
477 490 1.143684 ACACAACAGGCCATCAGAACT 59.856 47.619 5.01 0.00 0.00 3.01
478 491 2.233271 CACAACAGGCCATCAGAACTT 58.767 47.619 5.01 0.00 0.00 2.66
479 492 2.227388 CACAACAGGCCATCAGAACTTC 59.773 50.000 5.01 0.00 0.00 3.01
480 493 1.815003 CAACAGGCCATCAGAACTTCC 59.185 52.381 5.01 0.00 0.00 3.46
481 494 1.067295 ACAGGCCATCAGAACTTCCA 58.933 50.000 5.01 0.00 0.00 3.53
482 495 1.004044 ACAGGCCATCAGAACTTCCAG 59.996 52.381 5.01 0.00 0.00 3.86
483 496 1.280133 CAGGCCATCAGAACTTCCAGA 59.720 52.381 5.01 0.00 0.00 3.86
484 497 1.280421 AGGCCATCAGAACTTCCAGAC 59.720 52.381 5.01 0.00 0.00 3.51
485 498 1.280421 GGCCATCAGAACTTCCAGACT 59.720 52.381 0.00 0.00 0.00 3.24
486 499 2.626840 GCCATCAGAACTTCCAGACTC 58.373 52.381 0.00 0.00 0.00 3.36
487 500 2.027745 GCCATCAGAACTTCCAGACTCA 60.028 50.000 0.00 0.00 0.00 3.41
488 501 3.557898 GCCATCAGAACTTCCAGACTCAA 60.558 47.826 0.00 0.00 0.00 3.02
489 502 4.645535 CCATCAGAACTTCCAGACTCAAA 58.354 43.478 0.00 0.00 0.00 2.69
490 503 4.694509 CCATCAGAACTTCCAGACTCAAAG 59.305 45.833 0.00 0.00 0.00 2.77
522 535 2.048597 CGAGCAACGCACACCCTA 60.049 61.111 0.00 0.00 34.51 3.53
523 536 2.094659 CGAGCAACGCACACCCTAG 61.095 63.158 0.00 0.00 34.51 3.02
524 537 2.358737 AGCAACGCACACCCTAGC 60.359 61.111 0.00 0.00 0.00 3.42
542 555 1.064946 CGGTCTCGCTGATCTGGTC 59.935 63.158 1.46 0.00 0.00 4.02
551 564 0.036952 CTGATCTGGTCGTGGTTGCT 60.037 55.000 0.00 0.00 0.00 3.91
560 573 2.358003 GTGGTTGCTCGCAGCTCT 60.358 61.111 5.75 0.00 42.97 4.09
567 580 2.715005 CTCGCAGCTCTCTCCTCG 59.285 66.667 0.00 0.00 0.00 4.63
576 589 3.878519 CTCTCCTCGCCGTCGTCC 61.879 72.222 0.00 0.00 36.96 4.79
658 672 1.078567 CAGGCAAGGAGAGTGAGCC 60.079 63.158 0.00 0.00 45.54 4.70
777 793 4.426313 CTGTTCGGGGAAGGGGCC 62.426 72.222 0.00 0.00 0.00 5.80
778 794 4.995058 TGTTCGGGGAAGGGGCCT 62.995 66.667 0.84 0.00 0.00 5.19
1543 1699 0.108804 GCTTCCGGTGAGTTCGATCA 60.109 55.000 0.00 0.00 0.00 2.92
1594 1774 1.135699 GGCGATTGCGAATTGTGCTG 61.136 55.000 0.00 0.00 44.10 4.41
1829 2021 0.619255 TCGCCATGACCCCCTTCTTA 60.619 55.000 0.00 0.00 0.00 2.10
1876 2070 2.536803 GCTTATTCGGCGTCGTTCATTA 59.463 45.455 10.18 0.00 37.69 1.90
1880 2074 2.572191 TCGGCGTCGTTCATTAGAAT 57.428 45.000 10.18 0.00 35.92 2.40
1896 2090 8.846943 TCATTAGAATTGCAGTTCTGTTCTTA 57.153 30.769 28.88 9.75 38.79 2.10
1982 2369 2.045047 ACTCTCCCAAGATTCCTCTCCA 59.955 50.000 0.00 0.00 0.00 3.86
2351 2802 9.974980 TGAATTTGTTATCCATGATCAATGATG 57.025 29.630 16.53 4.24 38.72 3.07
2455 4009 7.936847 ACAATAATCTGAAACTGTTGTGGTCTA 59.063 33.333 0.00 0.00 0.00 2.59
2527 4337 8.934023 ATGGAACTTAAAACTCCAAATCAGTA 57.066 30.769 4.44 0.00 42.41 2.74
2545 4355 8.961294 AATCAGTAGATTCATCTCTTTTCAGG 57.039 34.615 0.00 0.00 40.39 3.86
2614 4426 9.767684 TTTTACTTGCGTTGAATAATATGTGAG 57.232 29.630 0.00 0.00 0.00 3.51
2630 4442 3.565307 TGTGAGCAAAATTCAGGTTCCT 58.435 40.909 0.00 0.00 0.00 3.36
2682 4515 3.981211 TGAGCTGCAATTTTGGTCTTTC 58.019 40.909 1.02 0.00 0.00 2.62
2731 4584 1.230324 GTTCGTCTGCTTTCCTGCTT 58.770 50.000 0.00 0.00 0.00 3.91
2775 4855 6.094742 TGTTCTTGAATCTGTTAGCAACAACA 59.905 34.615 0.00 0.00 41.61 3.33
2942 5104 0.255890 ATGGTAGGTGGCATGTGGAC 59.744 55.000 0.00 0.00 0.00 4.02
3092 5287 6.317857 GCCAAATCAAGTTCAGTCATCTTAC 58.682 40.000 0.00 0.00 0.00 2.34
3098 5293 4.442375 AGTTCAGTCATCTTACTCACCG 57.558 45.455 0.00 0.00 0.00 4.94
3115 5312 2.926200 CACCGTTGCAGAGAAGATACTG 59.074 50.000 0.00 0.00 37.22 2.74
3122 5322 6.091305 CGTTGCAGAGAAGATACTGATTTTCA 59.909 38.462 0.00 0.00 36.38 2.69
3287 5604 0.665670 CAGCCTACGATGATCTGCGG 60.666 60.000 11.41 0.00 0.00 5.69
3360 5688 3.199946 AGTTCACAAGTTTCTCCACCTCA 59.800 43.478 0.00 0.00 0.00 3.86
3362 5690 3.038280 TCACAAGTTTCTCCACCTCAGA 58.962 45.455 0.00 0.00 0.00 3.27
3434 5775 2.175878 TTCAGAAACTCAGCAGCTCC 57.824 50.000 0.00 0.00 0.00 4.70
3442 5783 2.031012 CAGCAGCTCCCGTGTTCA 59.969 61.111 0.00 0.00 0.00 3.18
3493 5846 1.076485 GGGTCCAATGGCTGAGCAT 60.076 57.895 6.82 0.00 0.00 3.79
3506 5859 6.173427 TGGCTGAGCATTATTGTAGTGATA 57.827 37.500 6.82 0.00 0.00 2.15
3555 5909 1.597797 CCCTGCGATGTGTTTGCCAT 61.598 55.000 0.00 0.00 33.31 4.40
3592 5950 3.072330 TGCATTTCACTGTAGGGTTCTCA 59.928 43.478 0.00 0.00 0.00 3.27
3611 5969 6.796785 TCTCACAATGAGTTGATGATCCTA 57.203 37.500 5.77 0.00 44.58 2.94
3683 6052 4.813027 TGCAATGAGCTTCATTCCTTTTC 58.187 39.130 8.01 0.00 43.03 2.29
3756 6126 6.083630 GCGCTGTTGATCATGTTTTTAGTTA 58.916 36.000 0.00 0.00 0.00 2.24
3758 6128 7.273381 GCGCTGTTGATCATGTTTTTAGTTATT 59.727 33.333 0.00 0.00 0.00 1.40
3769 6149 9.848172 CATGTTTTTAGTTATTCTGTTTTGTGC 57.152 29.630 0.00 0.00 0.00 4.57
3772 6152 8.588789 GTTTTTAGTTATTCTGTTTTGTGCGTT 58.411 29.630 0.00 0.00 0.00 4.84
3779 6159 8.800031 GTTATTCTGTTTTGTGCGTTTTTAGAA 58.200 29.630 0.00 0.00 0.00 2.10
3898 6298 8.483758 TGTTAAAAAGGAGGGAGTATCATCTAC 58.516 37.037 0.00 0.00 36.25 2.59
3899 6299 8.706521 GTTAAAAAGGAGGGAGTATCATCTACT 58.293 37.037 0.00 0.00 33.42 2.57
3900 6300 6.987403 AAAAGGAGGGAGTATCATCTACTC 57.013 41.667 4.22 4.22 42.28 2.59
3921 6321 2.521126 CCCCCGTTCCAAAATACTTGT 58.479 47.619 0.00 0.00 0.00 3.16
3922 6322 2.490509 CCCCCGTTCCAAAATACTTGTC 59.509 50.000 0.00 0.00 0.00 3.18
3923 6323 2.160813 CCCCGTTCCAAAATACTTGTCG 59.839 50.000 0.00 0.00 0.00 4.35
3924 6324 2.809696 CCCGTTCCAAAATACTTGTCGT 59.190 45.455 0.00 0.00 0.00 4.34
3925 6325 3.364565 CCCGTTCCAAAATACTTGTCGTG 60.365 47.826 0.00 0.00 0.00 4.35
3926 6326 3.364565 CCGTTCCAAAATACTTGTCGTGG 60.365 47.826 0.00 0.00 0.00 4.94
3927 6327 3.249080 CGTTCCAAAATACTTGTCGTGGT 59.751 43.478 0.00 0.00 0.00 4.16
3928 6328 4.260866 CGTTCCAAAATACTTGTCGTGGTT 60.261 41.667 0.00 0.00 0.00 3.67
3929 6329 5.050227 CGTTCCAAAATACTTGTCGTGGTTA 60.050 40.000 0.00 0.00 0.00 2.85
3930 6330 5.927954 TCCAAAATACTTGTCGTGGTTAC 57.072 39.130 0.00 0.00 0.00 2.50
3931 6331 5.366460 TCCAAAATACTTGTCGTGGTTACA 58.634 37.500 0.00 0.00 0.00 2.41
3932 6332 5.821470 TCCAAAATACTTGTCGTGGTTACAA 59.179 36.000 0.00 0.00 35.61 2.41
3933 6333 6.318144 TCCAAAATACTTGTCGTGGTTACAAA 59.682 34.615 0.00 0.00 36.46 2.83
3934 6334 7.013464 TCCAAAATACTTGTCGTGGTTACAAAT 59.987 33.333 0.00 0.00 36.46 2.32
3935 6335 7.650104 CCAAAATACTTGTCGTGGTTACAAATT 59.350 33.333 0.00 0.00 36.46 1.82
3936 6336 9.026074 CAAAATACTTGTCGTGGTTACAAATTT 57.974 29.630 0.00 0.00 36.46 1.82
3937 6337 8.568732 AAATACTTGTCGTGGTTACAAATTTG 57.431 30.769 16.67 16.67 36.46 2.32
3938 6338 5.570234 ACTTGTCGTGGTTACAAATTTGT 57.430 34.783 25.99 25.99 44.86 2.83
3939 6339 6.680874 ACTTGTCGTGGTTACAAATTTGTA 57.319 33.333 23.91 23.91 42.35 2.41
3940 6340 6.488817 ACTTGTCGTGGTTACAAATTTGTAC 58.511 36.000 26.72 20.68 42.84 2.90
3941 6341 6.316890 ACTTGTCGTGGTTACAAATTTGTACT 59.683 34.615 26.72 7.68 42.84 2.73
3942 6342 7.495279 ACTTGTCGTGGTTACAAATTTGTACTA 59.505 33.333 26.72 17.56 42.84 1.82
3943 6343 7.783090 TGTCGTGGTTACAAATTTGTACTAA 57.217 32.000 26.72 14.38 42.84 2.24
3944 6344 8.206325 TGTCGTGGTTACAAATTTGTACTAAA 57.794 30.769 26.72 14.05 42.84 1.85
3945 6345 8.671921 TGTCGTGGTTACAAATTTGTACTAAAA 58.328 29.630 26.72 13.71 42.84 1.52
3946 6346 8.946935 GTCGTGGTTACAAATTTGTACTAAAAC 58.053 33.333 26.72 22.43 42.84 2.43
3947 6347 8.127954 TCGTGGTTACAAATTTGTACTAAAACC 58.872 33.333 29.69 29.69 42.84 3.27
3948 6348 7.914346 CGTGGTTACAAATTTGTACTAAAACCA 59.086 33.333 32.59 32.59 45.36 3.67
3950 6350 7.914346 TGGTTACAAATTTGTACTAAAACCACG 59.086 33.333 32.59 6.29 43.97 4.94
3951 6351 8.127954 GGTTACAAATTTGTACTAAAACCACGA 58.872 33.333 30.58 14.05 42.84 4.35
3952 6352 8.946935 GTTACAAATTTGTACTAAAACCACGAC 58.053 33.333 26.72 15.34 42.84 4.34
3953 6353 7.086230 ACAAATTTGTACTAAAACCACGACA 57.914 32.000 22.10 0.00 40.16 4.35
3954 6354 7.536855 ACAAATTTGTACTAAAACCACGACAA 58.463 30.769 22.10 0.00 40.16 3.18
3955 6355 7.698970 ACAAATTTGTACTAAAACCACGACAAG 59.301 33.333 22.10 0.00 40.16 3.16
3956 6356 6.930667 ATTTGTACTAAAACCACGACAAGT 57.069 33.333 0.00 0.00 0.00 3.16
3957 6357 8.436046 AATTTGTACTAAAACCACGACAAGTA 57.564 30.769 0.00 0.00 0.00 2.24
3958 6358 8.611654 ATTTGTACTAAAACCACGACAAGTAT 57.388 30.769 0.00 0.00 0.00 2.12
3959 6359 8.436046 TTTGTACTAAAACCACGACAAGTATT 57.564 30.769 0.00 0.00 0.00 1.89
3960 6360 8.436046 TTGTACTAAAACCACGACAAGTATTT 57.564 30.769 0.00 0.00 0.00 1.40
3961 6361 8.436046 TGTACTAAAACCACGACAAGTATTTT 57.564 30.769 0.00 0.00 35.65 1.82
3962 6362 8.336806 TGTACTAAAACCACGACAAGTATTTTG 58.663 33.333 0.00 0.00 34.30 2.44
3963 6363 6.731164 ACTAAAACCACGACAAGTATTTTGG 58.269 36.000 0.00 0.00 36.03 3.28
3964 6364 5.838531 AAAACCACGACAAGTATTTTGGA 57.161 34.783 0.00 0.00 32.41 3.53
3965 6365 5.838531 AAACCACGACAAGTATTTTGGAA 57.161 34.783 0.00 0.00 0.00 3.53
3966 6366 4.823790 ACCACGACAAGTATTTTGGAAC 57.176 40.909 0.00 0.00 0.00 3.62
3967 6367 3.249080 ACCACGACAAGTATTTTGGAACG 59.751 43.478 0.00 0.00 0.00 3.95
3968 6368 3.364565 CCACGACAAGTATTTTGGAACGG 60.365 47.826 0.00 0.00 0.00 4.44
3969 6369 3.495377 CACGACAAGTATTTTGGAACGGA 59.505 43.478 0.00 0.00 0.00 4.69
3970 6370 3.744426 ACGACAAGTATTTTGGAACGGAG 59.256 43.478 0.00 0.00 0.00 4.63
3971 6371 3.124636 CGACAAGTATTTTGGAACGGAGG 59.875 47.826 0.00 0.00 0.00 4.30
3972 6372 3.418047 ACAAGTATTTTGGAACGGAGGG 58.582 45.455 0.00 0.00 0.00 4.30
3973 6373 3.073356 ACAAGTATTTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 0.00 4.20
3974 6374 3.629142 AGTATTTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
3975 6375 2.910977 AGTATTTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
3976 6376 4.098894 AGTATTTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
3977 6377 4.720273 AGTATTTTGGAACGGAGGGAGTAT 59.280 41.667 0.00 0.00 0.00 2.12
3978 6378 4.586306 ATTTTGGAACGGAGGGAGTATT 57.414 40.909 0.00 0.00 0.00 1.89
3992 6392 7.363094 CGGAGGGAGTATTTATGTTATCTCTCC 60.363 44.444 8.57 8.57 46.56 3.71
3994 6394 9.095700 GAGGGAGTATTTATGTTATCTCTCCTT 57.904 37.037 0.00 0.00 39.77 3.36
4004 6404 5.181009 TGTTATCTCTCCTTTGTGCAGATG 58.819 41.667 0.00 0.00 0.00 2.90
4025 6425 6.835488 AGATGGTTTCCAAACATATATGCAGT 59.165 34.615 12.79 0.00 40.63 4.40
4077 6477 1.005450 TGGCACCCCCTCTGAAAATAC 59.995 52.381 0.00 0.00 0.00 1.89
4222 6627 0.768221 TTGGTCAAGCTCTGGGTCCT 60.768 55.000 0.00 0.00 0.00 3.85
4223 6628 1.194781 TGGTCAAGCTCTGGGTCCTC 61.195 60.000 0.00 0.00 0.00 3.71
4224 6629 1.194781 GGTCAAGCTCTGGGTCCTCA 61.195 60.000 0.00 0.00 0.00 3.86
4226 6631 1.072331 GTCAAGCTCTGGGTCCTCAAA 59.928 52.381 0.00 0.00 0.00 2.69
4228 6633 2.376518 TCAAGCTCTGGGTCCTCAAATT 59.623 45.455 0.00 0.00 0.00 1.82
4229 6634 3.160269 CAAGCTCTGGGTCCTCAAATTT 58.840 45.455 0.00 0.00 0.00 1.82
4230 6635 2.800250 AGCTCTGGGTCCTCAAATTTG 58.200 47.619 12.15 12.15 0.00 2.32
4287 6734 2.415090 GCCAAGTTGCACATTAGAGCAG 60.415 50.000 0.00 0.00 42.24 4.24
4299 6746 4.582656 ACATTAGAGCAGCTCTAGTCGAAT 59.417 41.667 27.42 18.77 42.92 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.346395 TGTGTTGCCTCCACTAATCGT 59.654 47.619 0.00 0.00 33.92 3.73
2 3 3.057526 GGTTTGTGTTGCCTCCACTAATC 60.058 47.826 0.00 0.00 31.97 1.75
3 4 2.890945 GGTTTGTGTTGCCTCCACTAAT 59.109 45.455 0.00 0.00 31.97 1.73
4 5 2.303175 GGTTTGTGTTGCCTCCACTAA 58.697 47.619 0.00 0.00 33.92 2.24
5 6 1.213182 TGGTTTGTGTTGCCTCCACTA 59.787 47.619 0.00 0.00 33.92 2.74
6 7 0.033601 TGGTTTGTGTTGCCTCCACT 60.034 50.000 0.00 0.00 33.92 4.00
7 8 0.820871 TTGGTTTGTGTTGCCTCCAC 59.179 50.000 0.00 0.00 0.00 4.02
8 9 1.686052 GATTGGTTTGTGTTGCCTCCA 59.314 47.619 0.00 0.00 0.00 3.86
9 10 1.335872 CGATTGGTTTGTGTTGCCTCC 60.336 52.381 0.00 0.00 0.00 4.30
10 11 1.606668 TCGATTGGTTTGTGTTGCCTC 59.393 47.619 0.00 0.00 0.00 4.70
11 12 1.336755 GTCGATTGGTTTGTGTTGCCT 59.663 47.619 0.00 0.00 0.00 4.75
12 13 1.066303 TGTCGATTGGTTTGTGTTGCC 59.934 47.619 0.00 0.00 0.00 4.52
13 14 2.483583 TGTCGATTGGTTTGTGTTGC 57.516 45.000 0.00 0.00 0.00 4.17
14 15 4.148166 CGTATGTCGATTGGTTTGTGTTG 58.852 43.478 0.00 0.00 42.86 3.33
15 16 3.187637 CCGTATGTCGATTGGTTTGTGTT 59.812 43.478 0.00 0.00 42.86 3.32
16 17 2.739913 CCGTATGTCGATTGGTTTGTGT 59.260 45.455 0.00 0.00 42.86 3.72
17 18 2.095213 CCCGTATGTCGATTGGTTTGTG 59.905 50.000 0.00 0.00 42.86 3.33
18 19 2.289819 ACCCGTATGTCGATTGGTTTGT 60.290 45.455 0.00 0.00 42.86 2.83
19 20 2.095213 CACCCGTATGTCGATTGGTTTG 59.905 50.000 0.00 0.00 42.86 2.93
20 21 2.352388 CACCCGTATGTCGATTGGTTT 58.648 47.619 0.00 0.00 42.86 3.27
21 22 1.406341 CCACCCGTATGTCGATTGGTT 60.406 52.381 0.00 0.00 42.86 3.67
22 23 0.177141 CCACCCGTATGTCGATTGGT 59.823 55.000 0.00 0.00 42.86 3.67
23 24 0.462375 TCCACCCGTATGTCGATTGG 59.538 55.000 0.00 0.00 42.86 3.16
24 25 2.303163 TTCCACCCGTATGTCGATTG 57.697 50.000 0.00 0.00 42.86 2.67
25 26 3.553828 ATTTCCACCCGTATGTCGATT 57.446 42.857 0.00 0.00 42.86 3.34
26 27 3.553828 AATTTCCACCCGTATGTCGAT 57.446 42.857 0.00 0.00 42.86 3.59
27 28 4.081531 AGTTAATTTCCACCCGTATGTCGA 60.082 41.667 0.00 0.00 42.86 4.20
28 29 4.186159 AGTTAATTTCCACCCGTATGTCG 58.814 43.478 0.00 0.00 39.52 4.35
29 30 5.220529 CGAAGTTAATTTCCACCCGTATGTC 60.221 44.000 5.24 0.00 0.00 3.06
30 31 4.632688 CGAAGTTAATTTCCACCCGTATGT 59.367 41.667 5.24 0.00 0.00 2.29
31 32 4.495184 GCGAAGTTAATTTCCACCCGTATG 60.495 45.833 5.24 0.00 0.00 2.39
32 33 3.624410 GCGAAGTTAATTTCCACCCGTAT 59.376 43.478 5.24 0.00 0.00 3.06
33 34 3.002102 GCGAAGTTAATTTCCACCCGTA 58.998 45.455 5.24 0.00 0.00 4.02
34 35 1.808343 GCGAAGTTAATTTCCACCCGT 59.192 47.619 5.24 0.00 0.00 5.28
35 36 1.201987 CGCGAAGTTAATTTCCACCCG 60.202 52.381 0.00 0.73 0.00 5.28
36 37 2.078392 TCGCGAAGTTAATTTCCACCC 58.922 47.619 6.20 0.00 0.00 4.61
37 38 2.473376 CGTCGCGAAGTTAATTTCCACC 60.473 50.000 12.06 0.00 0.00 4.61
38 39 2.473376 CCGTCGCGAAGTTAATTTCCAC 60.473 50.000 20.36 0.00 0.00 4.02
39 40 1.727880 CCGTCGCGAAGTTAATTTCCA 59.272 47.619 20.36 0.00 0.00 3.53
40 41 1.728425 ACCGTCGCGAAGTTAATTTCC 59.272 47.619 20.36 0.00 0.00 3.13
41 42 2.754478 CACCGTCGCGAAGTTAATTTC 58.246 47.619 20.36 0.76 0.00 2.17
42 43 1.136169 GCACCGTCGCGAAGTTAATTT 60.136 47.619 20.36 0.00 0.00 1.82
43 44 0.441145 GCACCGTCGCGAAGTTAATT 59.559 50.000 20.36 0.00 0.00 1.40
44 45 1.356527 GGCACCGTCGCGAAGTTAAT 61.357 55.000 20.36 0.70 0.00 1.40
45 46 2.023223 GGCACCGTCGCGAAGTTAA 61.023 57.895 20.36 0.00 0.00 2.01
46 47 2.431260 GGCACCGTCGCGAAGTTA 60.431 61.111 20.36 0.00 0.00 2.24
47 48 4.295119 AGGCACCGTCGCGAAGTT 62.295 61.111 20.36 3.38 0.00 2.66
48 49 4.719369 GAGGCACCGTCGCGAAGT 62.719 66.667 20.36 13.87 0.00 3.01
58 59 0.680061 CTAGGGTTATCGGAGGCACC 59.320 60.000 0.00 0.00 0.00 5.01
59 60 0.680061 CCTAGGGTTATCGGAGGCAC 59.320 60.000 0.00 0.00 0.00 5.01
60 61 3.143010 CCTAGGGTTATCGGAGGCA 57.857 57.895 0.00 0.00 0.00 4.75
61 62 1.672320 GCCTAGGGTTATCGGAGGC 59.328 63.158 11.72 0.00 45.48 4.70
62 63 1.550976 GATGCCTAGGGTTATCGGAGG 59.449 57.143 11.72 0.00 0.00 4.30
63 64 2.248248 TGATGCCTAGGGTTATCGGAG 58.752 52.381 11.72 0.00 0.00 4.63
64 65 2.391926 TGATGCCTAGGGTTATCGGA 57.608 50.000 11.72 0.00 0.00 4.55
65 66 3.428999 CGTATGATGCCTAGGGTTATCGG 60.429 52.174 11.72 0.00 0.00 4.18
66 67 3.442625 TCGTATGATGCCTAGGGTTATCG 59.557 47.826 11.72 0.00 0.00 2.92
67 68 4.463186 AGTCGTATGATGCCTAGGGTTATC 59.537 45.833 11.72 0.00 0.00 1.75
68 69 4.220821 CAGTCGTATGATGCCTAGGGTTAT 59.779 45.833 11.72 0.00 0.00 1.89
69 70 3.572682 CAGTCGTATGATGCCTAGGGTTA 59.427 47.826 11.72 0.00 0.00 2.85
70 71 2.365617 CAGTCGTATGATGCCTAGGGTT 59.634 50.000 11.72 0.00 0.00 4.11
71 72 1.964223 CAGTCGTATGATGCCTAGGGT 59.036 52.381 11.72 0.00 0.00 4.34
72 73 2.239400 TCAGTCGTATGATGCCTAGGG 58.761 52.381 11.72 0.00 0.00 3.53
73 74 4.527509 ATTCAGTCGTATGATGCCTAGG 57.472 45.455 3.67 3.67 0.00 3.02
74 75 5.292765 ACAATTCAGTCGTATGATGCCTAG 58.707 41.667 0.00 0.00 0.00 3.02
75 76 5.276461 ACAATTCAGTCGTATGATGCCTA 57.724 39.130 0.00 0.00 0.00 3.93
76 77 4.142609 ACAATTCAGTCGTATGATGCCT 57.857 40.909 0.00 0.00 0.00 4.75
77 78 4.882671 AACAATTCAGTCGTATGATGCC 57.117 40.909 0.00 0.00 0.00 4.40
78 79 5.904080 GCTAAACAATTCAGTCGTATGATGC 59.096 40.000 0.00 0.00 0.00 3.91
79 80 7.010460 TCAGCTAAACAATTCAGTCGTATGATG 59.990 37.037 0.00 0.00 0.00 3.07
80 81 7.041721 TCAGCTAAACAATTCAGTCGTATGAT 58.958 34.615 0.00 0.00 0.00 2.45
81 82 6.394809 TCAGCTAAACAATTCAGTCGTATGA 58.605 36.000 0.00 0.00 0.00 2.15
82 83 6.647212 TCAGCTAAACAATTCAGTCGTATG 57.353 37.500 0.00 0.00 0.00 2.39
83 84 5.292101 GCTCAGCTAAACAATTCAGTCGTAT 59.708 40.000 0.00 0.00 0.00 3.06
84 85 4.625742 GCTCAGCTAAACAATTCAGTCGTA 59.374 41.667 0.00 0.00 0.00 3.43
85 86 3.433615 GCTCAGCTAAACAATTCAGTCGT 59.566 43.478 0.00 0.00 0.00 4.34
86 87 3.433274 TGCTCAGCTAAACAATTCAGTCG 59.567 43.478 0.00 0.00 0.00 4.18
87 88 5.557891 ATGCTCAGCTAAACAATTCAGTC 57.442 39.130 0.00 0.00 0.00 3.51
88 89 6.314896 GTCTATGCTCAGCTAAACAATTCAGT 59.685 38.462 0.00 0.00 0.00 3.41
89 90 6.314648 TGTCTATGCTCAGCTAAACAATTCAG 59.685 38.462 0.00 0.00 0.00 3.02
90 91 6.172630 TGTCTATGCTCAGCTAAACAATTCA 58.827 36.000 0.00 0.00 0.00 2.57
91 92 6.668541 TGTCTATGCTCAGCTAAACAATTC 57.331 37.500 0.00 0.00 0.00 2.17
92 93 7.452880 TTTGTCTATGCTCAGCTAAACAATT 57.547 32.000 0.00 0.00 0.00 2.32
93 94 7.452880 TTTTGTCTATGCTCAGCTAAACAAT 57.547 32.000 0.00 0.00 0.00 2.71
94 95 6.875948 TTTTGTCTATGCTCAGCTAAACAA 57.124 33.333 0.00 0.76 0.00 2.83
95 96 6.875948 TTTTTGTCTATGCTCAGCTAAACA 57.124 33.333 0.00 0.00 0.00 2.83
96 97 7.530010 TCATTTTTGTCTATGCTCAGCTAAAC 58.470 34.615 0.00 0.00 0.00 2.01
97 98 7.686438 TCATTTTTGTCTATGCTCAGCTAAA 57.314 32.000 0.00 0.00 0.00 1.85
98 99 7.686438 TTCATTTTTGTCTATGCTCAGCTAA 57.314 32.000 0.00 0.00 0.00 3.09
99 100 7.686438 TTTCATTTTTGTCTATGCTCAGCTA 57.314 32.000 0.00 0.00 0.00 3.32
100 101 6.579666 TTTCATTTTTGTCTATGCTCAGCT 57.420 33.333 0.00 0.00 0.00 4.24
101 102 6.865205 ACTTTTCATTTTTGTCTATGCTCAGC 59.135 34.615 0.00 0.00 0.00 4.26
102 103 8.807667 AACTTTTCATTTTTGTCTATGCTCAG 57.192 30.769 0.00 0.00 0.00 3.35
110 111 9.883142 TCCAACATTAACTTTTCATTTTTGTCT 57.117 25.926 0.00 0.00 0.00 3.41
134 135 6.163476 GGGTTGATGTATCTTTTGGTTTTCC 58.837 40.000 0.00 0.00 41.14 3.13
135 136 5.861787 CGGGTTGATGTATCTTTTGGTTTTC 59.138 40.000 0.00 0.00 0.00 2.29
136 137 5.279256 CCGGGTTGATGTATCTTTTGGTTTT 60.279 40.000 0.00 0.00 0.00 2.43
137 138 4.219725 CCGGGTTGATGTATCTTTTGGTTT 59.780 41.667 0.00 0.00 0.00 3.27
138 139 3.761752 CCGGGTTGATGTATCTTTTGGTT 59.238 43.478 0.00 0.00 0.00 3.67
139 140 3.352648 CCGGGTTGATGTATCTTTTGGT 58.647 45.455 0.00 0.00 0.00 3.67
140 141 2.687935 CCCGGGTTGATGTATCTTTTGG 59.312 50.000 14.18 0.00 0.00 3.28
141 142 3.377172 GTCCCGGGTTGATGTATCTTTTG 59.623 47.826 22.86 0.00 0.00 2.44
142 143 3.009695 TGTCCCGGGTTGATGTATCTTTT 59.990 43.478 22.86 0.00 0.00 2.27
143 144 2.574369 TGTCCCGGGTTGATGTATCTTT 59.426 45.455 22.86 0.00 0.00 2.52
144 145 2.093128 GTGTCCCGGGTTGATGTATCTT 60.093 50.000 22.86 0.00 0.00 2.40
145 146 1.485066 GTGTCCCGGGTTGATGTATCT 59.515 52.381 22.86 0.00 0.00 1.98
146 147 1.474498 GGTGTCCCGGGTTGATGTATC 60.474 57.143 22.86 2.08 0.00 2.24
147 148 0.544697 GGTGTCCCGGGTTGATGTAT 59.455 55.000 22.86 0.00 0.00 2.29
148 149 1.984817 GGTGTCCCGGGTTGATGTA 59.015 57.895 22.86 0.00 0.00 2.29
149 150 2.754375 GGTGTCCCGGGTTGATGT 59.246 61.111 22.86 0.00 0.00 3.06
159 160 1.036481 GGGTAGAGAGACGGTGTCCC 61.036 65.000 1.13 0.00 32.18 4.46
160 161 1.036481 GGGGTAGAGAGACGGTGTCC 61.036 65.000 1.13 0.00 32.18 4.02
161 162 1.036481 GGGGGTAGAGAGACGGTGTC 61.036 65.000 0.00 0.00 0.00 3.67
162 163 1.000107 GGGGGTAGAGAGACGGTGT 60.000 63.158 0.00 0.00 0.00 4.16
163 164 1.000019 TGGGGGTAGAGAGACGGTG 60.000 63.158 0.00 0.00 0.00 4.94
164 165 1.306970 CTGGGGGTAGAGAGACGGT 59.693 63.158 0.00 0.00 0.00 4.83
165 166 2.128507 GCTGGGGGTAGAGAGACGG 61.129 68.421 0.00 0.00 0.00 4.79
166 167 2.128507 GGCTGGGGGTAGAGAGACG 61.129 68.421 0.00 0.00 0.00 4.18
167 168 0.325765 AAGGCTGGGGGTAGAGAGAC 60.326 60.000 0.00 0.00 0.00 3.36
168 169 0.417841 AAAGGCTGGGGGTAGAGAGA 59.582 55.000 0.00 0.00 0.00 3.10
169 170 0.833949 GAAAGGCTGGGGGTAGAGAG 59.166 60.000 0.00 0.00 0.00 3.20
170 171 0.118346 TGAAAGGCTGGGGGTAGAGA 59.882 55.000 0.00 0.00 0.00 3.10
171 172 0.253327 GTGAAAGGCTGGGGGTAGAG 59.747 60.000 0.00 0.00 0.00 2.43
172 173 0.474854 TGTGAAAGGCTGGGGGTAGA 60.475 55.000 0.00 0.00 0.00 2.59
173 174 0.322546 GTGTGAAAGGCTGGGGGTAG 60.323 60.000 0.00 0.00 0.00 3.18
174 175 1.063070 TGTGTGAAAGGCTGGGGGTA 61.063 55.000 0.00 0.00 0.00 3.69
175 176 1.729267 ATGTGTGAAAGGCTGGGGGT 61.729 55.000 0.00 0.00 0.00 4.95
176 177 0.967380 GATGTGTGAAAGGCTGGGGG 60.967 60.000 0.00 0.00 0.00 5.40
177 178 0.251297 TGATGTGTGAAAGGCTGGGG 60.251 55.000 0.00 0.00 0.00 4.96
178 179 1.171308 CTGATGTGTGAAAGGCTGGG 58.829 55.000 0.00 0.00 0.00 4.45
179 180 0.524862 GCTGATGTGTGAAAGGCTGG 59.475 55.000 0.00 0.00 0.00 4.85
180 181 1.531423 AGCTGATGTGTGAAAGGCTG 58.469 50.000 0.00 0.00 0.00 4.85
181 182 2.283145 AAGCTGATGTGTGAAAGGCT 57.717 45.000 0.00 0.00 0.00 4.58
182 183 2.352127 GGAAAGCTGATGTGTGAAAGGC 60.352 50.000 0.00 0.00 0.00 4.35
183 184 3.152341 AGGAAAGCTGATGTGTGAAAGG 58.848 45.455 0.00 0.00 0.00 3.11
184 185 4.276678 TGAAGGAAAGCTGATGTGTGAAAG 59.723 41.667 0.00 0.00 0.00 2.62
185 186 4.036734 GTGAAGGAAAGCTGATGTGTGAAA 59.963 41.667 0.00 0.00 0.00 2.69
186 187 3.565482 GTGAAGGAAAGCTGATGTGTGAA 59.435 43.478 0.00 0.00 0.00 3.18
187 188 3.141398 GTGAAGGAAAGCTGATGTGTGA 58.859 45.455 0.00 0.00 0.00 3.58
188 189 2.227388 GGTGAAGGAAAGCTGATGTGTG 59.773 50.000 0.00 0.00 0.00 3.82
189 190 2.508526 GGTGAAGGAAAGCTGATGTGT 58.491 47.619 0.00 0.00 0.00 3.72
190 191 1.466167 CGGTGAAGGAAAGCTGATGTG 59.534 52.381 0.00 0.00 0.00 3.21
191 192 1.813513 CGGTGAAGGAAAGCTGATGT 58.186 50.000 0.00 0.00 0.00 3.06
192 193 0.449388 GCGGTGAAGGAAAGCTGATG 59.551 55.000 0.00 0.00 0.00 3.07
193 194 0.326264 AGCGGTGAAGGAAAGCTGAT 59.674 50.000 0.00 0.00 36.73 2.90
194 195 0.108585 AAGCGGTGAAGGAAAGCTGA 59.891 50.000 0.00 0.00 38.28 4.26
195 196 0.954452 AAAGCGGTGAAGGAAAGCTG 59.046 50.000 0.00 0.00 38.28 4.24
196 197 0.954452 CAAAGCGGTGAAGGAAAGCT 59.046 50.000 0.00 0.00 40.20 3.74
197 198 0.039165 CCAAAGCGGTGAAGGAAAGC 60.039 55.000 0.00 0.00 0.00 3.51
208 209 1.937899 CGGTAAATCCTACCAAAGCGG 59.062 52.381 2.10 0.00 37.44 5.52
209 210 2.606272 GTCGGTAAATCCTACCAAAGCG 59.394 50.000 2.10 0.00 37.44 4.68
210 211 3.373130 GTGTCGGTAAATCCTACCAAAGC 59.627 47.826 2.10 0.00 37.44 3.51
211 212 4.630069 CAGTGTCGGTAAATCCTACCAAAG 59.370 45.833 2.10 0.00 37.44 2.77
212 213 4.040706 ACAGTGTCGGTAAATCCTACCAAA 59.959 41.667 0.00 0.00 37.44 3.28
213 214 3.579586 ACAGTGTCGGTAAATCCTACCAA 59.420 43.478 0.00 0.00 37.44 3.67
214 215 3.167485 ACAGTGTCGGTAAATCCTACCA 58.833 45.455 0.00 0.00 37.44 3.25
215 216 3.881937 ACAGTGTCGGTAAATCCTACC 57.118 47.619 0.00 0.00 31.75 3.18
216 217 5.697633 TCAAAACAGTGTCGGTAAATCCTAC 59.302 40.000 0.00 0.00 33.17 3.18
217 218 5.856156 TCAAAACAGTGTCGGTAAATCCTA 58.144 37.500 0.00 0.00 0.00 2.94
218 219 4.710324 TCAAAACAGTGTCGGTAAATCCT 58.290 39.130 0.00 0.00 0.00 3.24
219 220 5.427036 TTCAAAACAGTGTCGGTAAATCC 57.573 39.130 0.00 0.00 0.00 3.01
220 221 6.741358 GCTATTCAAAACAGTGTCGGTAAATC 59.259 38.462 0.00 0.00 0.00 2.17
221 222 6.430000 AGCTATTCAAAACAGTGTCGGTAAAT 59.570 34.615 0.00 0.00 0.00 1.40
222 223 5.761234 AGCTATTCAAAACAGTGTCGGTAAA 59.239 36.000 0.00 0.00 0.00 2.01
223 224 5.302360 AGCTATTCAAAACAGTGTCGGTAA 58.698 37.500 0.00 0.00 0.00 2.85
224 225 4.890088 AGCTATTCAAAACAGTGTCGGTA 58.110 39.130 0.00 0.00 0.00 4.02
225 226 3.740115 AGCTATTCAAAACAGTGTCGGT 58.260 40.909 0.00 0.00 0.00 4.69
226 227 4.749245 AAGCTATTCAAAACAGTGTCGG 57.251 40.909 0.00 0.00 0.00 4.79
227 228 6.223138 TGTAAGCTATTCAAAACAGTGTCG 57.777 37.500 0.00 0.00 0.00 4.35
228 229 7.806690 TCATGTAAGCTATTCAAAACAGTGTC 58.193 34.615 0.00 0.00 0.00 3.67
229 230 7.445402 ACTCATGTAAGCTATTCAAAACAGTGT 59.555 33.333 0.00 0.00 0.00 3.55
230 231 7.810658 ACTCATGTAAGCTATTCAAAACAGTG 58.189 34.615 0.00 0.00 0.00 3.66
231 232 7.986085 ACTCATGTAAGCTATTCAAAACAGT 57.014 32.000 0.00 0.00 0.00 3.55
232 233 8.391106 GGTACTCATGTAAGCTATTCAAAACAG 58.609 37.037 0.00 0.00 0.00 3.16
233 234 7.335924 GGGTACTCATGTAAGCTATTCAAAACA 59.664 37.037 0.00 0.00 0.00 2.83
234 235 7.201705 GGGGTACTCATGTAAGCTATTCAAAAC 60.202 40.741 0.00 0.00 0.00 2.43
235 236 6.826741 GGGGTACTCATGTAAGCTATTCAAAA 59.173 38.462 0.00 0.00 0.00 2.44
236 237 6.069905 TGGGGTACTCATGTAAGCTATTCAAA 60.070 38.462 0.00 0.00 0.00 2.69
237 238 5.427157 TGGGGTACTCATGTAAGCTATTCAA 59.573 40.000 0.00 0.00 0.00 2.69
238 239 4.966168 TGGGGTACTCATGTAAGCTATTCA 59.034 41.667 0.00 0.00 0.00 2.57
239 240 5.546621 TGGGGTACTCATGTAAGCTATTC 57.453 43.478 0.00 0.00 0.00 1.75
240 241 5.013183 GGATGGGGTACTCATGTAAGCTATT 59.987 44.000 0.00 0.00 0.00 1.73
241 242 4.532521 GGATGGGGTACTCATGTAAGCTAT 59.467 45.833 0.00 0.00 0.00 2.97
242 243 3.901844 GGATGGGGTACTCATGTAAGCTA 59.098 47.826 0.00 0.00 0.00 3.32
243 244 2.706190 GGATGGGGTACTCATGTAAGCT 59.294 50.000 0.00 0.00 0.00 3.74
244 245 2.706190 AGGATGGGGTACTCATGTAAGC 59.294 50.000 0.00 0.00 0.00 3.09
245 246 4.342862 CAGGATGGGGTACTCATGTAAG 57.657 50.000 0.00 0.00 0.00 2.34
260 261 4.443978 ACAATCTTATGGTCCCAGGATG 57.556 45.455 0.00 0.00 0.00 3.51
261 262 4.386761 CCAACAATCTTATGGTCCCAGGAT 60.387 45.833 0.00 0.00 0.00 3.24
262 263 3.053693 CCAACAATCTTATGGTCCCAGGA 60.054 47.826 0.00 0.00 0.00 3.86
263 264 3.290710 CCAACAATCTTATGGTCCCAGG 58.709 50.000 0.00 0.00 0.00 4.45
264 265 3.053693 TCCCAACAATCTTATGGTCCCAG 60.054 47.826 0.00 0.00 32.13 4.45
265 266 2.922955 TCCCAACAATCTTATGGTCCCA 59.077 45.455 0.00 0.00 32.13 4.37
266 267 3.053619 AGTCCCAACAATCTTATGGTCCC 60.054 47.826 0.00 0.00 32.13 4.46
267 268 4.236527 AGTCCCAACAATCTTATGGTCC 57.763 45.455 0.00 0.00 32.13 4.46
268 269 5.501156 AGAAGTCCCAACAATCTTATGGTC 58.499 41.667 0.00 0.00 32.13 4.02
269 270 5.520748 AGAAGTCCCAACAATCTTATGGT 57.479 39.130 0.00 0.00 32.13 3.55
270 271 6.840780 AAAGAAGTCCCAACAATCTTATGG 57.159 37.500 0.00 0.00 34.58 2.74
271 272 7.092716 CCAAAAGAAGTCCCAACAATCTTATG 58.907 38.462 0.00 0.00 34.58 1.90
272 273 6.295292 GCCAAAAGAAGTCCCAACAATCTTAT 60.295 38.462 0.00 0.00 34.58 1.73
273 274 5.010617 GCCAAAAGAAGTCCCAACAATCTTA 59.989 40.000 0.00 0.00 34.58 2.10
274 275 4.202253 GCCAAAAGAAGTCCCAACAATCTT 60.202 41.667 0.00 0.00 36.16 2.40
275 276 3.321968 GCCAAAAGAAGTCCCAACAATCT 59.678 43.478 0.00 0.00 0.00 2.40
276 277 3.321968 AGCCAAAAGAAGTCCCAACAATC 59.678 43.478 0.00 0.00 0.00 2.67
277 278 3.070015 CAGCCAAAAGAAGTCCCAACAAT 59.930 43.478 0.00 0.00 0.00 2.71
278 279 2.430332 CAGCCAAAAGAAGTCCCAACAA 59.570 45.455 0.00 0.00 0.00 2.83
279 280 2.031120 CAGCCAAAAGAAGTCCCAACA 58.969 47.619 0.00 0.00 0.00 3.33
280 281 1.341209 CCAGCCAAAAGAAGTCCCAAC 59.659 52.381 0.00 0.00 0.00 3.77
281 282 1.703411 CCAGCCAAAAGAAGTCCCAA 58.297 50.000 0.00 0.00 0.00 4.12
282 283 0.827507 GCCAGCCAAAAGAAGTCCCA 60.828 55.000 0.00 0.00 0.00 4.37
283 284 0.827507 TGCCAGCCAAAAGAAGTCCC 60.828 55.000 0.00 0.00 0.00 4.46
284 285 1.039856 TTGCCAGCCAAAAGAAGTCC 58.960 50.000 0.00 0.00 0.00 3.85
285 286 2.680577 CATTGCCAGCCAAAAGAAGTC 58.319 47.619 0.00 0.00 36.92 3.01
286 287 1.270465 GCATTGCCAGCCAAAAGAAGT 60.270 47.619 0.00 0.00 36.92 3.01
287 288 1.001633 AGCATTGCCAGCCAAAAGAAG 59.998 47.619 4.70 0.00 36.92 2.85
288 289 1.050204 AGCATTGCCAGCCAAAAGAA 58.950 45.000 4.70 0.00 36.92 2.52
289 290 1.820519 CTAGCATTGCCAGCCAAAAGA 59.179 47.619 4.70 0.00 36.92 2.52
290 291 1.134907 CCTAGCATTGCCAGCCAAAAG 60.135 52.381 4.70 0.00 36.92 2.27
291 292 0.896923 CCTAGCATTGCCAGCCAAAA 59.103 50.000 4.70 0.00 36.92 2.44
292 293 0.039472 TCCTAGCATTGCCAGCCAAA 59.961 50.000 4.70 0.00 36.92 3.28
293 294 0.680921 GTCCTAGCATTGCCAGCCAA 60.681 55.000 4.70 0.00 37.94 4.52
294 295 1.077501 GTCCTAGCATTGCCAGCCA 60.078 57.895 4.70 0.00 0.00 4.75
295 296 1.077501 TGTCCTAGCATTGCCAGCC 60.078 57.895 4.70 0.00 0.00 4.85
296 297 0.677731 TGTGTCCTAGCATTGCCAGC 60.678 55.000 4.70 0.00 0.00 4.85
297 298 1.825090 TTGTGTCCTAGCATTGCCAG 58.175 50.000 4.70 0.25 0.00 4.85
298 299 2.512692 ATTGTGTCCTAGCATTGCCA 57.487 45.000 4.70 0.00 0.00 4.92
299 300 3.874392 AAATTGTGTCCTAGCATTGCC 57.126 42.857 4.70 0.00 0.00 4.52
300 301 4.808558 TGAAAATTGTGTCCTAGCATTGC 58.191 39.130 0.00 0.00 0.00 3.56
301 302 6.700960 TGTTTGAAAATTGTGTCCTAGCATTG 59.299 34.615 0.00 0.00 0.00 2.82
302 303 6.815089 TGTTTGAAAATTGTGTCCTAGCATT 58.185 32.000 0.00 0.00 0.00 3.56
303 304 6.403866 TGTTTGAAAATTGTGTCCTAGCAT 57.596 33.333 0.00 0.00 0.00 3.79
304 305 5.843673 TGTTTGAAAATTGTGTCCTAGCA 57.156 34.783 0.00 0.00 0.00 3.49
305 306 7.115378 CAGATTGTTTGAAAATTGTGTCCTAGC 59.885 37.037 0.00 0.00 0.00 3.42
306 307 7.115378 GCAGATTGTTTGAAAATTGTGTCCTAG 59.885 37.037 0.00 0.00 0.00 3.02
332 333 7.201556 CCTTGTGTAACTAAGCTGTGTGATATG 60.202 40.741 0.00 0.00 38.04 1.78
344 345 6.371809 TTCACTTTGCCTTGTGTAACTAAG 57.628 37.500 0.00 0.00 38.04 2.18
391 404 2.755876 TGTGCCGGTGTTTGCCAA 60.756 55.556 1.90 0.00 0.00 4.52
416 429 2.669569 CTCGGGTGGCACCTTGTG 60.670 66.667 33.87 22.63 38.64 3.33
417 430 4.643387 GCTCGGGTGGCACCTTGT 62.643 66.667 33.87 0.00 38.64 3.16
418 431 4.641645 TGCTCGGGTGGCACCTTG 62.642 66.667 33.87 25.90 38.64 3.61
423 436 2.124109 TTTTGTGCTCGGGTGGCA 60.124 55.556 0.00 0.00 37.36 4.92
424 437 2.335011 GTTTTGTGCTCGGGTGGC 59.665 61.111 0.00 0.00 0.00 5.01
425 438 1.358759 GTGTTTTGTGCTCGGGTGG 59.641 57.895 0.00 0.00 0.00 4.61
426 439 0.029300 CTGTGTTTTGTGCTCGGGTG 59.971 55.000 0.00 0.00 0.00 4.61
427 440 1.101049 CCTGTGTTTTGTGCTCGGGT 61.101 55.000 0.00 0.00 0.00 5.28
428 441 0.817634 TCCTGTGTTTTGTGCTCGGG 60.818 55.000 0.00 0.00 0.00 5.14
429 442 0.588252 CTCCTGTGTTTTGTGCTCGG 59.412 55.000 0.00 0.00 0.00 4.63
430 443 0.040958 GCTCCTGTGTTTTGTGCTCG 60.041 55.000 0.00 0.00 0.00 5.03
431 444 1.024271 TGCTCCTGTGTTTTGTGCTC 58.976 50.000 0.00 0.00 0.00 4.26
432 445 0.740737 GTGCTCCTGTGTTTTGTGCT 59.259 50.000 0.00 0.00 0.00 4.40
433 446 0.455410 TGTGCTCCTGTGTTTTGTGC 59.545 50.000 0.00 0.00 0.00 4.57
434 447 1.534595 GCTGTGCTCCTGTGTTTTGTG 60.535 52.381 0.00 0.00 0.00 3.33
435 448 0.740737 GCTGTGCTCCTGTGTTTTGT 59.259 50.000 0.00 0.00 0.00 2.83
436 449 0.740149 TGCTGTGCTCCTGTGTTTTG 59.260 50.000 0.00 0.00 0.00 2.44
437 450 1.473258 TTGCTGTGCTCCTGTGTTTT 58.527 45.000 0.00 0.00 0.00 2.43
438 451 1.134946 GTTTGCTGTGCTCCTGTGTTT 59.865 47.619 0.00 0.00 0.00 2.83
439 452 0.740737 GTTTGCTGTGCTCCTGTGTT 59.259 50.000 0.00 0.00 0.00 3.32
440 453 0.394216 TGTTTGCTGTGCTCCTGTGT 60.394 50.000 0.00 0.00 0.00 3.72
441 454 0.029834 GTGTTTGCTGTGCTCCTGTG 59.970 55.000 0.00 0.00 0.00 3.66
442 455 0.394216 TGTGTTTGCTGTGCTCCTGT 60.394 50.000 0.00 0.00 0.00 4.00
443 456 0.740149 TTGTGTTTGCTGTGCTCCTG 59.260 50.000 0.00 0.00 0.00 3.86
446 459 1.534595 CCTGTTGTGTTTGCTGTGCTC 60.535 52.381 0.00 0.00 0.00 4.26
462 475 1.004044 CTGGAAGTTCTGATGGCCTGT 59.996 52.381 3.32 0.00 0.00 4.00
467 480 3.969287 TGAGTCTGGAAGTTCTGATGG 57.031 47.619 2.25 0.00 33.76 3.51
471 484 2.478134 CGCTTTGAGTCTGGAAGTTCTG 59.522 50.000 2.25 0.00 33.76 3.02
472 485 2.548920 CCGCTTTGAGTCTGGAAGTTCT 60.549 50.000 2.25 0.00 33.76 3.01
473 486 1.801178 CCGCTTTGAGTCTGGAAGTTC 59.199 52.381 0.00 0.00 33.76 3.01
474 487 1.884235 CCGCTTTGAGTCTGGAAGTT 58.116 50.000 0.00 0.00 33.76 2.66
475 488 0.603975 GCCGCTTTGAGTCTGGAAGT 60.604 55.000 0.00 0.00 33.76 3.01
476 489 0.603707 TGCCGCTTTGAGTCTGGAAG 60.604 55.000 0.00 0.00 0.00 3.46
477 490 0.179032 TTGCCGCTTTGAGTCTGGAA 60.179 50.000 0.00 0.00 0.00 3.53
478 491 0.603707 CTTGCCGCTTTGAGTCTGGA 60.604 55.000 0.00 0.00 0.00 3.86
479 492 1.871772 CTTGCCGCTTTGAGTCTGG 59.128 57.895 0.00 0.00 0.00 3.86
480 493 1.208614 GCTTGCCGCTTTGAGTCTG 59.791 57.895 0.00 0.00 35.14 3.51
481 494 1.968540 GGCTTGCCGCTTTGAGTCT 60.969 57.895 0.00 0.00 39.13 3.24
482 495 2.563427 GGCTTGCCGCTTTGAGTC 59.437 61.111 0.00 0.00 39.13 3.36
483 496 3.357079 CGGCTTGCCGCTTTGAGT 61.357 61.111 21.17 0.00 39.13 3.41
524 537 1.064946 GACCAGATCAGCGAGACCG 59.935 63.158 0.00 0.00 39.16 4.79
525 538 1.064946 CGACCAGATCAGCGAGACC 59.935 63.158 0.00 0.00 0.00 3.85
542 555 3.782244 GAGCTGCGAGCAACCACG 61.782 66.667 10.16 0.00 45.56 4.94
551 564 3.513438 GCGAGGAGAGAGCTGCGA 61.513 66.667 0.00 0.00 37.57 5.10
635 649 2.438075 CTCTCCTTGCCTGGCTGC 60.438 66.667 21.03 0.00 0.00 5.25
636 650 1.376942 CACTCTCCTTGCCTGGCTG 60.377 63.158 21.03 12.36 0.00 4.85
644 658 0.747283 GGCATGGCTCACTCTCCTTG 60.747 60.000 12.86 0.00 0.00 3.61
758 774 2.990479 CCCCTTCCCCGAACAGAG 59.010 66.667 0.00 0.00 0.00 3.35
1452 1605 1.915489 ACCCAGTGCATCATGGAGTTA 59.085 47.619 15.07 0.00 39.02 2.24
1543 1699 1.819632 GAAGCGGGTCATGGCGATT 60.820 57.895 0.00 0.00 0.00 3.34
1691 1873 2.557920 GAATCTCATTCCTGGGCGAT 57.442 50.000 0.00 0.00 33.17 4.58
1772 1954 3.474570 GCATGCCCGACTCTCCCT 61.475 66.667 6.36 0.00 0.00 4.20
1801 1989 3.068064 TCATGGCGAGCTCACCGA 61.068 61.111 15.86 5.35 0.00 4.69
1829 2021 4.855715 TCGCTCAATCGATAGGAGAATT 57.144 40.909 23.77 0.00 33.02 2.17
1876 2070 5.376625 TGGTAAGAACAGAACTGCAATTCT 58.623 37.500 4.20 4.20 39.60 2.40
1880 2074 6.463995 AATTTGGTAAGAACAGAACTGCAA 57.536 33.333 1.46 0.00 0.00 4.08
1896 2090 4.338118 TCAAGAACTGCTCGAAAATTTGGT 59.662 37.500 0.00 0.00 0.00 3.67
1982 2369 1.671054 CCGGCTCCGTGAACATGTT 60.671 57.895 11.78 11.78 37.81 2.71
2337 2762 5.347620 ACCCAAAACATCATTGATCATGG 57.652 39.130 0.00 0.00 33.07 3.66
2351 2802 4.580995 CCCCACCAAAATAAAACCCAAAAC 59.419 41.667 0.00 0.00 0.00 2.43
2455 4009 4.911514 ATTCGCAACACCTAACAGTTTT 57.088 36.364 0.00 0.00 0.00 2.43
2527 4337 7.170965 TGTTAAGCCTGAAAAGAGATGAATCT 58.829 34.615 0.00 0.00 40.50 2.40
2545 4355 2.420687 CCCACCATCCTCTCTGTTAAGC 60.421 54.545 0.00 0.00 0.00 3.09
2682 4515 5.831702 ATCTCAGAGCCTTGCAAAATAAG 57.168 39.130 0.00 0.00 0.00 1.73
2748 4617 7.094508 TGTTGCTAACAGATTCAAGAACAAA 57.905 32.000 0.00 0.00 36.25 2.83
2775 4855 4.828939 AGACCACAAACATCATGTTCATGT 59.171 37.500 2.74 2.59 40.14 3.21
2858 4969 2.165437 CCAGACAGCTCTCAAGTCCTAC 59.835 54.545 0.00 0.00 32.82 3.18
2912 5030 4.215109 GCCACCTACCATTTACATCCAAT 58.785 43.478 0.00 0.00 0.00 3.16
2925 5081 0.328258 AAGTCCACATGCCACCTACC 59.672 55.000 0.00 0.00 0.00 3.18
3092 5287 2.376808 ATCTTCTCTGCAACGGTGAG 57.623 50.000 3.55 0.00 0.00 3.51
3098 5293 7.369803 TGAAAATCAGTATCTTCTCTGCAAC 57.630 36.000 0.00 0.00 0.00 4.17
3122 5322 8.475639 ACACTACCTGAGTTTCATTAACGATAT 58.524 33.333 0.00 0.00 41.78 1.63
3287 5604 2.016704 CGCGTCGATATCTGGGTGC 61.017 63.158 0.00 0.00 0.00 5.01
3360 5688 2.169352 AGTTCTGCTGCCATCGTATTCT 59.831 45.455 0.00 0.00 0.00 2.40
3362 5690 2.283298 CAGTTCTGCTGCCATCGTATT 58.717 47.619 0.00 0.00 38.52 1.89
3506 5859 5.712446 TGTCAGAAGAGCTACTACATTCAGT 59.288 40.000 0.00 0.00 0.00 3.41
3548 5902 1.271108 TGTCTACGAAGCCATGGCAAA 60.271 47.619 37.18 16.53 44.88 3.68
3555 5909 2.401583 ATGCATTGTCTACGAAGCCA 57.598 45.000 0.00 0.00 0.00 4.75
3592 5950 8.585471 AAATTGTAGGATCATCAACTCATTGT 57.415 30.769 0.00 0.00 37.11 2.71
3683 6052 1.755161 ATACGCGAAGTGCATAGTCG 58.245 50.000 15.93 11.07 46.97 4.18
3756 6126 7.516627 GCATTCTAAAAACGCACAAAACAGAAT 60.517 33.333 0.00 0.00 32.04 2.40
3758 6128 5.231147 GCATTCTAAAAACGCACAAAACAGA 59.769 36.000 0.00 0.00 0.00 3.41
3769 6149 2.867429 CAGGCCAGCATTCTAAAAACG 58.133 47.619 5.01 0.00 0.00 3.60
3772 6152 1.921982 TGCAGGCCAGCATTCTAAAA 58.078 45.000 20.27 0.00 40.11 1.52
3901 6301 2.490509 GACAAGTATTTTGGAACGGGGG 59.509 50.000 0.00 0.00 0.00 5.40
3902 6302 2.160813 CGACAAGTATTTTGGAACGGGG 59.839 50.000 0.00 0.00 0.00 5.73
3903 6303 2.809696 ACGACAAGTATTTTGGAACGGG 59.190 45.455 0.00 0.00 0.00 5.28
3904 6304 3.364565 CCACGACAAGTATTTTGGAACGG 60.365 47.826 0.00 0.00 0.00 4.44
3905 6305 3.249080 ACCACGACAAGTATTTTGGAACG 59.751 43.478 0.00 0.00 0.00 3.95
3906 6306 4.823790 ACCACGACAAGTATTTTGGAAC 57.176 40.909 0.00 0.00 0.00 3.62
3907 6307 5.821470 TGTAACCACGACAAGTATTTTGGAA 59.179 36.000 0.00 0.00 0.00 3.53
3908 6308 5.366460 TGTAACCACGACAAGTATTTTGGA 58.634 37.500 0.00 0.00 0.00 3.53
3909 6309 5.676532 TGTAACCACGACAAGTATTTTGG 57.323 39.130 0.00 0.00 0.00 3.28
3910 6310 8.568732 AATTTGTAACCACGACAAGTATTTTG 57.431 30.769 0.00 0.00 38.03 2.44
3911 6311 9.026074 CAAATTTGTAACCACGACAAGTATTTT 57.974 29.630 10.15 0.00 38.03 1.82
3912 6312 8.192110 ACAAATTTGTAACCACGACAAGTATTT 58.808 29.630 22.10 0.00 40.16 1.40
3913 6313 7.708998 ACAAATTTGTAACCACGACAAGTATT 58.291 30.769 22.10 0.00 40.16 1.89
3914 6314 7.266922 ACAAATTTGTAACCACGACAAGTAT 57.733 32.000 22.10 0.00 40.16 2.12
3915 6315 6.680874 ACAAATTTGTAACCACGACAAGTA 57.319 33.333 22.10 0.00 40.16 2.24
3916 6316 5.570234 ACAAATTTGTAACCACGACAAGT 57.430 34.783 22.10 0.00 40.16 3.16
3917 6317 6.721321 AGTACAAATTTGTAACCACGACAAG 58.279 36.000 28.05 0.00 44.46 3.16
3918 6318 6.680874 AGTACAAATTTGTAACCACGACAA 57.319 33.333 28.05 5.88 44.46 3.18
3919 6319 7.783090 TTAGTACAAATTTGTAACCACGACA 57.217 32.000 28.05 6.58 44.46 4.35
3920 6320 8.946935 GTTTTAGTACAAATTTGTAACCACGAC 58.053 33.333 28.05 18.24 44.46 4.34
3921 6321 8.127954 GGTTTTAGTACAAATTTGTAACCACGA 58.872 33.333 30.58 18.44 44.46 4.35
3922 6322 7.914346 TGGTTTTAGTACAAATTTGTAACCACG 59.086 33.333 32.59 8.41 43.97 4.94
3924 6324 7.914346 CGTGGTTTTAGTACAAATTTGTAACCA 59.086 33.333 32.59 32.59 45.36 3.67
3925 6325 8.127954 TCGTGGTTTTAGTACAAATTTGTAACC 58.872 33.333 29.69 29.69 44.46 2.85
3926 6326 8.946935 GTCGTGGTTTTAGTACAAATTTGTAAC 58.053 33.333 28.05 23.06 44.46 2.50
3927 6327 8.671921 TGTCGTGGTTTTAGTACAAATTTGTAA 58.328 29.630 28.05 15.18 44.46 2.41
3928 6328 8.206325 TGTCGTGGTTTTAGTACAAATTTGTA 57.794 30.769 23.91 23.91 42.35 2.41
3929 6329 7.086230 TGTCGTGGTTTTAGTACAAATTTGT 57.914 32.000 25.99 25.99 44.86 2.83
3930 6330 7.698970 ACTTGTCGTGGTTTTAGTACAAATTTG 59.301 33.333 16.67 16.67 0.00 2.32
3931 6331 7.764331 ACTTGTCGTGGTTTTAGTACAAATTT 58.236 30.769 0.00 0.00 0.00 1.82
3932 6332 7.324354 ACTTGTCGTGGTTTTAGTACAAATT 57.676 32.000 0.00 0.00 0.00 1.82
3933 6333 6.930667 ACTTGTCGTGGTTTTAGTACAAAT 57.069 33.333 0.00 0.00 0.00 2.32
3934 6334 8.436046 AATACTTGTCGTGGTTTTAGTACAAA 57.564 30.769 0.00 0.00 0.00 2.83
3935 6335 8.436046 AAATACTTGTCGTGGTTTTAGTACAA 57.564 30.769 0.00 0.00 0.00 2.41
3936 6336 8.336806 CAAAATACTTGTCGTGGTTTTAGTACA 58.663 33.333 0.00 0.00 0.00 2.90
3937 6337 7.799914 CCAAAATACTTGTCGTGGTTTTAGTAC 59.200 37.037 0.00 0.00 0.00 2.73
3938 6338 7.714377 TCCAAAATACTTGTCGTGGTTTTAGTA 59.286 33.333 0.00 0.00 0.00 1.82
3939 6339 6.543100 TCCAAAATACTTGTCGTGGTTTTAGT 59.457 34.615 0.00 0.00 0.00 2.24
3940 6340 6.961576 TCCAAAATACTTGTCGTGGTTTTAG 58.038 36.000 0.00 0.00 0.00 1.85
3941 6341 6.939132 TCCAAAATACTTGTCGTGGTTTTA 57.061 33.333 0.00 0.00 0.00 1.52
3942 6342 5.838531 TCCAAAATACTTGTCGTGGTTTT 57.161 34.783 0.00 0.00 0.00 2.43
3943 6343 5.584442 GTTCCAAAATACTTGTCGTGGTTT 58.416 37.500 0.00 0.00 0.00 3.27
3944 6344 4.260866 CGTTCCAAAATACTTGTCGTGGTT 60.261 41.667 0.00 0.00 0.00 3.67
3945 6345 3.249080 CGTTCCAAAATACTTGTCGTGGT 59.751 43.478 0.00 0.00 0.00 4.16
3946 6346 3.364565 CCGTTCCAAAATACTTGTCGTGG 60.365 47.826 0.00 0.00 0.00 4.94
3947 6347 3.495377 TCCGTTCCAAAATACTTGTCGTG 59.505 43.478 0.00 0.00 0.00 4.35
3948 6348 3.731089 TCCGTTCCAAAATACTTGTCGT 58.269 40.909 0.00 0.00 0.00 4.34
3949 6349 3.124636 CCTCCGTTCCAAAATACTTGTCG 59.875 47.826 0.00 0.00 0.00 4.35
3950 6350 3.439129 CCCTCCGTTCCAAAATACTTGTC 59.561 47.826 0.00 0.00 0.00 3.18
3951 6351 3.073356 TCCCTCCGTTCCAAAATACTTGT 59.927 43.478 0.00 0.00 0.00 3.16
3952 6352 3.681593 TCCCTCCGTTCCAAAATACTTG 58.318 45.455 0.00 0.00 0.00 3.16
3953 6353 3.329814 ACTCCCTCCGTTCCAAAATACTT 59.670 43.478 0.00 0.00 0.00 2.24
3954 6354 2.910977 ACTCCCTCCGTTCCAAAATACT 59.089 45.455 0.00 0.00 0.00 2.12
3955 6355 3.345508 ACTCCCTCCGTTCCAAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
3956 6356 5.703730 AATACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
3957 6357 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
3958 6358 4.376225 AAATACTCCCTCCGTTCCAAAA 57.624 40.909 0.00 0.00 0.00 2.44
3959 6359 5.045432 ACATAAATACTCCCTCCGTTCCAAA 60.045 40.000 0.00 0.00 0.00 3.28
3960 6360 4.472108 ACATAAATACTCCCTCCGTTCCAA 59.528 41.667 0.00 0.00 0.00 3.53
3961 6361 4.035112 ACATAAATACTCCCTCCGTTCCA 58.965 43.478 0.00 0.00 0.00 3.53
3962 6362 4.684484 ACATAAATACTCCCTCCGTTCC 57.316 45.455 0.00 0.00 0.00 3.62
3963 6363 7.668492 AGATAACATAAATACTCCCTCCGTTC 58.332 38.462 0.00 0.00 0.00 3.95
3964 6364 7.509659 AGAGATAACATAAATACTCCCTCCGTT 59.490 37.037 0.00 0.00 0.00 4.44
3965 6365 7.011382 AGAGATAACATAAATACTCCCTCCGT 58.989 38.462 0.00 0.00 0.00 4.69
3966 6366 7.363094 GGAGAGATAACATAAATACTCCCTCCG 60.363 44.444 0.00 0.00 37.34 4.63
3967 6367 7.676468 AGGAGAGATAACATAAATACTCCCTCC 59.324 40.741 0.00 0.00 42.20 4.30
3968 6368 8.658840 AGGAGAGATAACATAAATACTCCCTC 57.341 38.462 0.00 0.00 42.20 4.30
3969 6369 9.453830 AAAGGAGAGATAACATAAATACTCCCT 57.546 33.333 0.00 0.00 42.20 4.20
3970 6370 9.495572 CAAAGGAGAGATAACATAAATACTCCC 57.504 37.037 0.00 0.00 42.20 4.30
3973 6373 9.331282 GCACAAAGGAGAGATAACATAAATACT 57.669 33.333 0.00 0.00 0.00 2.12
3974 6374 9.109393 TGCACAAAGGAGAGATAACATAAATAC 57.891 33.333 0.00 0.00 0.00 1.89
3975 6375 9.330063 CTGCACAAAGGAGAGATAACATAAATA 57.670 33.333 0.00 0.00 38.04 1.40
3976 6376 8.049117 TCTGCACAAAGGAGAGATAACATAAAT 58.951 33.333 0.00 0.00 40.06 1.40
3977 6377 7.394016 TCTGCACAAAGGAGAGATAACATAAA 58.606 34.615 0.00 0.00 40.06 1.40
3978 6378 6.946340 TCTGCACAAAGGAGAGATAACATAA 58.054 36.000 0.00 0.00 40.06 1.90
3992 6392 3.731652 TTGGAAACCATCTGCACAAAG 57.268 42.857 0.00 0.00 31.53 2.77
3994 6394 2.762887 TGTTTGGAAACCATCTGCACAA 59.237 40.909 0.00 0.00 38.11 3.33
4004 6404 5.591099 CCACTGCATATATGTTTGGAAACC 58.409 41.667 17.84 0.61 38.11 3.27
4170 6574 6.250819 CAACCTTATCACGCACAATAGAAAG 58.749 40.000 0.00 0.00 0.00 2.62
4208 6613 2.503895 ATTTGAGGACCCAGAGCTTG 57.496 50.000 0.00 0.00 0.00 4.01
4256 6703 2.358898 GTGCAACTTGGCGGATGATTAT 59.641 45.455 0.00 0.00 36.28 1.28
4287 6734 4.116238 CCTTTTGAGGATTCGACTAGAGC 58.884 47.826 0.00 0.00 0.00 4.09



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.