Multiple sequence alignment - TraesCS2D01G132400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G132400 chr2D 100.000 3116 0 0 1 3116 77182632 77185747 0.000000e+00 5755.0
1 TraesCS2D01G132400 chr2D 92.918 706 34 7 3 702 600313665 600312970 0.000000e+00 1013.0
2 TraesCS2D01G132400 chr2D 92.504 707 39 5 3 704 590029177 590028480 0.000000e+00 1000.0
3 TraesCS2D01G132400 chr2D 91.465 703 44 5 8 705 58736248 58736939 0.000000e+00 952.0
4 TraesCS2D01G132400 chr2B 93.875 1551 68 9 843 2371 119183420 119184965 0.000000e+00 2313.0
5 TraesCS2D01G132400 chr2B 91.678 709 46 4 3 706 232451857 232452557 0.000000e+00 970.0
6 TraesCS2D01G132400 chr4D 93.191 705 35 4 3 703 28487988 28488683 0.000000e+00 1024.0
7 TraesCS2D01G132400 chr7B 92.504 707 40 4 3 704 632802287 632802985 0.000000e+00 1000.0
8 TraesCS2D01G132400 chr7B 70.783 1150 262 44 991 2103 634559046 634560158 8.820000e-46 195.0
9 TraesCS2D01G132400 chr7B 100.000 28 0 0 2547 2574 687410240 687410267 6.000000e-03 52.8
10 TraesCS2D01G132400 chr5D 92.614 704 39 5 3 702 152736432 152737126 0.000000e+00 1000.0
11 TraesCS2D01G132400 chr5D 90.986 710 39 6 3 704 39038440 39039132 0.000000e+00 933.0
12 TraesCS2D01G132400 chr2A 91.020 735 65 1 1329 2062 78190098 78190832 0.000000e+00 990.0
13 TraesCS2D01G132400 chr2A 92.835 642 34 4 3 640 44180238 44179605 0.000000e+00 920.0
14 TraesCS2D01G132400 chr2A 90.022 451 36 1 843 1284 78189636 78190086 2.700000e-160 575.0
15 TraesCS2D01G132400 chr2A 86.784 227 21 6 2050 2275 78216228 78216446 8.630000e-61 244.0
16 TraesCS2D01G132400 chr2A 97.436 39 1 0 1652 1690 191899210 191899172 2.010000e-07 67.6
17 TraesCS2D01G132400 chr1D 92.340 705 41 6 5 704 461900431 461901127 0.000000e+00 990.0
18 TraesCS2D01G132400 chr7D 91.926 706 44 4 3 704 321046157 321045461 0.000000e+00 976.0
19 TraesCS2D01G132400 chr7D 89.776 313 23 3 393 704 505591805 505591501 2.910000e-105 392.0
20 TraesCS2D01G132400 chr7D 76.316 532 103 16 1584 2099 574759076 574759600 2.380000e-66 263.0
21 TraesCS2D01G132400 chr1B 91.926 706 44 5 3 704 72710999 72711695 0.000000e+00 976.0
22 TraesCS2D01G132400 chr6D 91.808 708 39 4 1 704 51193468 51192776 0.000000e+00 968.0
23 TraesCS2D01G132400 chr6D 92.625 678 36 5 3 675 351142803 351143471 0.000000e+00 963.0
24 TraesCS2D01G132400 chr4B 91.655 707 46 5 3 704 604539905 604539207 0.000000e+00 966.0
25 TraesCS2D01G132400 chr5B 86.634 202 19 1 510 711 434929010 434928817 1.880000e-52 217.0
26 TraesCS2D01G132400 chr7A 97.436 39 1 0 1652 1690 577689902 577689940 2.010000e-07 67.6
27 TraesCS2D01G132400 chr5A 97.436 39 1 0 1652 1690 648814218 648814256 2.010000e-07 67.6
28 TraesCS2D01G132400 chr5A 100.000 28 0 0 2544 2571 332221050 332221077 6.000000e-03 52.8
29 TraesCS2D01G132400 chr1A 97.436 39 1 0 1652 1690 309700229 309700191 2.010000e-07 67.6
30 TraesCS2D01G132400 chr1A 97.436 39 1 0 1652 1690 456472603 456472565 2.010000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G132400 chr2D 77182632 77185747 3115 False 5755.0 5755 100.000 1 3116 1 chr2D.!!$F2 3115
1 TraesCS2D01G132400 chr2D 600312970 600313665 695 True 1013.0 1013 92.918 3 702 1 chr2D.!!$R2 699
2 TraesCS2D01G132400 chr2D 590028480 590029177 697 True 1000.0 1000 92.504 3 704 1 chr2D.!!$R1 701
3 TraesCS2D01G132400 chr2D 58736248 58736939 691 False 952.0 952 91.465 8 705 1 chr2D.!!$F1 697
4 TraesCS2D01G132400 chr2B 119183420 119184965 1545 False 2313.0 2313 93.875 843 2371 1 chr2B.!!$F1 1528
5 TraesCS2D01G132400 chr2B 232451857 232452557 700 False 970.0 970 91.678 3 706 1 chr2B.!!$F2 703
6 TraesCS2D01G132400 chr4D 28487988 28488683 695 False 1024.0 1024 93.191 3 703 1 chr4D.!!$F1 700
7 TraesCS2D01G132400 chr7B 632802287 632802985 698 False 1000.0 1000 92.504 3 704 1 chr7B.!!$F1 701
8 TraesCS2D01G132400 chr5D 152736432 152737126 694 False 1000.0 1000 92.614 3 702 1 chr5D.!!$F2 699
9 TraesCS2D01G132400 chr5D 39038440 39039132 692 False 933.0 933 90.986 3 704 1 chr5D.!!$F1 701
10 TraesCS2D01G132400 chr2A 44179605 44180238 633 True 920.0 920 92.835 3 640 1 chr2A.!!$R1 637
11 TraesCS2D01G132400 chr2A 78189636 78190832 1196 False 782.5 990 90.521 843 2062 2 chr2A.!!$F2 1219
12 TraesCS2D01G132400 chr1D 461900431 461901127 696 False 990.0 990 92.340 5 704 1 chr1D.!!$F1 699
13 TraesCS2D01G132400 chr7D 321045461 321046157 696 True 976.0 976 91.926 3 704 1 chr7D.!!$R1 701
14 TraesCS2D01G132400 chr7D 574759076 574759600 524 False 263.0 263 76.316 1584 2099 1 chr7D.!!$F1 515
15 TraesCS2D01G132400 chr1B 72710999 72711695 696 False 976.0 976 91.926 3 704 1 chr1B.!!$F1 701
16 TraesCS2D01G132400 chr6D 51192776 51193468 692 True 968.0 968 91.808 1 704 1 chr6D.!!$R1 703
17 TraesCS2D01G132400 chr6D 351142803 351143471 668 False 963.0 963 92.625 3 675 1 chr6D.!!$F1 672
18 TraesCS2D01G132400 chr4B 604539207 604539905 698 True 966.0 966 91.655 3 704 1 chr4B.!!$R1 701

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
820 830 0.03716 GAAGGAGGCCCCGTAAAACA 59.963 55.0 0.0 0.0 40.87 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2412 2456 0.039437 GACTTCGTTCAGCTCGGTCA 60.039 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 9.798994 GATGACAATGCTGAATAAAGATTCTTT 57.201 29.630 15.57 15.57 41.87 2.52
143 144 4.285863 TGGATTTGGAAACCAGTCTGTTT 58.714 39.130 0.00 0.04 40.99 2.83
352 359 3.117888 GGCAGATATGGTTTCCTCCTTCA 60.118 47.826 0.00 0.00 0.00 3.02
577 586 4.315588 CGGAGGTAGGTGACGAGT 57.684 61.111 0.00 0.00 0.00 4.18
584 593 4.202441 GAGGTAGGTGACGAGTATTGGTA 58.798 47.826 0.00 0.00 0.00 3.25
585 594 4.603131 AGGTAGGTGACGAGTATTGGTAA 58.397 43.478 0.00 0.00 0.00 2.85
586 595 5.018809 AGGTAGGTGACGAGTATTGGTAAA 58.981 41.667 0.00 0.00 0.00 2.01
587 596 5.481473 AGGTAGGTGACGAGTATTGGTAAAA 59.519 40.000 0.00 0.00 0.00 1.52
588 597 6.014327 AGGTAGGTGACGAGTATTGGTAAAAA 60.014 38.462 0.00 0.00 0.00 1.94
627 636 7.608308 AGATGTTCTGCTATCTTTTCAGTTC 57.392 36.000 0.00 0.00 29.64 3.01
720 730 4.419522 AAAAACGGATTTCACGGATGAG 57.580 40.909 0.00 0.00 35.83 2.90
721 731 2.762535 AACGGATTTCACGGATGAGT 57.237 45.000 0.00 0.00 35.83 3.41
722 732 2.762535 ACGGATTTCACGGATGAGTT 57.237 45.000 0.00 0.00 35.83 3.01
723 733 2.346803 ACGGATTTCACGGATGAGTTG 58.653 47.619 0.00 0.00 35.83 3.16
724 734 2.028476 ACGGATTTCACGGATGAGTTGA 60.028 45.455 0.00 0.00 35.83 3.18
725 735 2.604914 CGGATTTCACGGATGAGTTGAG 59.395 50.000 0.00 0.00 35.83 3.02
726 736 2.939103 GGATTTCACGGATGAGTTGAGG 59.061 50.000 0.00 0.00 35.83 3.86
727 737 3.600388 GATTTCACGGATGAGTTGAGGT 58.400 45.455 0.00 0.00 35.83 3.85
728 738 2.455674 TTCACGGATGAGTTGAGGTG 57.544 50.000 0.00 0.00 35.83 4.00
729 739 0.608130 TCACGGATGAGTTGAGGTGG 59.392 55.000 0.00 0.00 0.00 4.61
730 740 0.608130 CACGGATGAGTTGAGGTGGA 59.392 55.000 0.00 0.00 0.00 4.02
731 741 0.608640 ACGGATGAGTTGAGGTGGAC 59.391 55.000 0.00 0.00 0.00 4.02
732 742 0.108138 CGGATGAGTTGAGGTGGACC 60.108 60.000 0.00 0.00 0.00 4.46
733 743 0.984230 GGATGAGTTGAGGTGGACCA 59.016 55.000 0.00 0.00 38.89 4.02
734 744 1.351017 GGATGAGTTGAGGTGGACCAA 59.649 52.381 0.00 0.00 38.89 3.67
735 745 2.025887 GGATGAGTTGAGGTGGACCAAT 60.026 50.000 0.00 0.00 38.89 3.16
736 746 3.199946 GGATGAGTTGAGGTGGACCAATA 59.800 47.826 0.00 0.00 38.89 1.90
737 747 3.981071 TGAGTTGAGGTGGACCAATAG 57.019 47.619 0.00 0.00 38.89 1.73
738 748 3.516586 TGAGTTGAGGTGGACCAATAGA 58.483 45.455 0.00 0.00 38.89 1.98
739 749 3.907474 TGAGTTGAGGTGGACCAATAGAA 59.093 43.478 0.00 0.00 38.89 2.10
740 750 4.536090 TGAGTTGAGGTGGACCAATAGAAT 59.464 41.667 0.00 0.00 38.89 2.40
741 751 5.014123 TGAGTTGAGGTGGACCAATAGAATT 59.986 40.000 0.00 0.00 38.89 2.17
742 752 5.256474 AGTTGAGGTGGACCAATAGAATTG 58.744 41.667 0.00 0.00 38.89 2.32
743 753 3.620488 TGAGGTGGACCAATAGAATTGC 58.380 45.455 0.00 0.00 38.89 3.56
744 754 2.614057 GAGGTGGACCAATAGAATTGCG 59.386 50.000 0.00 0.00 38.89 4.85
745 755 2.238646 AGGTGGACCAATAGAATTGCGA 59.761 45.455 0.00 0.00 38.89 5.10
746 756 3.013921 GGTGGACCAATAGAATTGCGAA 58.986 45.455 0.00 0.00 35.64 4.70
747 757 3.632145 GGTGGACCAATAGAATTGCGAAT 59.368 43.478 0.00 0.00 35.64 3.34
748 758 4.097892 GGTGGACCAATAGAATTGCGAATT 59.902 41.667 0.00 0.00 35.64 2.17
749 759 5.298276 GGTGGACCAATAGAATTGCGAATTA 59.702 40.000 0.00 0.00 35.64 1.40
750 760 6.430451 GTGGACCAATAGAATTGCGAATTAG 58.570 40.000 0.00 0.00 0.00 1.73
751 761 5.530915 TGGACCAATAGAATTGCGAATTAGG 59.469 40.000 0.00 0.00 0.00 2.69
752 762 5.763204 GGACCAATAGAATTGCGAATTAGGA 59.237 40.000 0.00 0.00 0.00 2.94
753 763 6.073003 GGACCAATAGAATTGCGAATTAGGAG 60.073 42.308 0.00 0.00 0.00 3.69
754 764 6.591935 ACCAATAGAATTGCGAATTAGGAGA 58.408 36.000 0.00 0.00 0.00 3.71
755 765 6.483640 ACCAATAGAATTGCGAATTAGGAGAC 59.516 38.462 0.00 0.00 0.00 3.36
756 766 6.346919 CCAATAGAATTGCGAATTAGGAGACG 60.347 42.308 0.00 0.00 0.00 4.18
757 767 4.386867 AGAATTGCGAATTAGGAGACGA 57.613 40.909 0.00 0.00 0.00 4.20
758 768 4.755411 AGAATTGCGAATTAGGAGACGAA 58.245 39.130 0.00 0.00 0.00 3.85
759 769 4.806247 AGAATTGCGAATTAGGAGACGAAG 59.194 41.667 0.00 0.00 0.00 3.79
760 770 2.579207 TGCGAATTAGGAGACGAAGG 57.421 50.000 0.00 0.00 0.00 3.46
761 771 1.136305 TGCGAATTAGGAGACGAAGGG 59.864 52.381 0.00 0.00 0.00 3.95
762 772 1.854227 CGAATTAGGAGACGAAGGGC 58.146 55.000 0.00 0.00 0.00 5.19
763 773 1.538419 CGAATTAGGAGACGAAGGGCC 60.538 57.143 0.00 0.00 0.00 5.80
764 774 0.837940 AATTAGGAGACGAAGGGCCC 59.162 55.000 16.46 16.46 0.00 5.80
765 775 1.400530 ATTAGGAGACGAAGGGCCCG 61.401 60.000 18.44 7.33 0.00 6.13
768 778 4.162690 GAGACGAAGGGCCCGCAT 62.163 66.667 18.44 6.84 0.00 4.73
769 779 4.162690 AGACGAAGGGCCCGCATC 62.163 66.667 18.44 15.45 0.00 3.91
777 787 4.440829 GGCCCGCATCCCCTGAAA 62.441 66.667 0.00 0.00 0.00 2.69
778 788 2.362375 GCCCGCATCCCCTGAAAA 60.362 61.111 0.00 0.00 0.00 2.29
779 789 1.758122 GCCCGCATCCCCTGAAAAT 60.758 57.895 0.00 0.00 0.00 1.82
780 790 1.738346 GCCCGCATCCCCTGAAAATC 61.738 60.000 0.00 0.00 0.00 2.17
781 791 0.395586 CCCGCATCCCCTGAAAATCA 60.396 55.000 0.00 0.00 0.00 2.57
782 792 1.027357 CCGCATCCCCTGAAAATCAG 58.973 55.000 0.32 0.32 43.91 2.90
791 801 2.795231 CTGAAAATCAGGGGCAGAGA 57.205 50.000 0.00 0.00 40.71 3.10
792 802 2.641305 CTGAAAATCAGGGGCAGAGAG 58.359 52.381 0.00 0.00 40.71 3.20
793 803 2.238144 CTGAAAATCAGGGGCAGAGAGA 59.762 50.000 0.00 0.00 40.71 3.10
794 804 2.848694 TGAAAATCAGGGGCAGAGAGAT 59.151 45.455 0.00 0.00 0.00 2.75
795 805 3.267812 TGAAAATCAGGGGCAGAGAGATT 59.732 43.478 0.00 0.00 0.00 2.40
796 806 4.264083 TGAAAATCAGGGGCAGAGAGATTT 60.264 41.667 0.00 0.00 39.74 2.17
797 807 3.294038 AATCAGGGGCAGAGAGATTTG 57.706 47.619 0.00 0.00 0.00 2.32
798 808 1.661463 TCAGGGGCAGAGAGATTTGT 58.339 50.000 0.00 0.00 0.00 2.83
799 809 1.988107 TCAGGGGCAGAGAGATTTGTT 59.012 47.619 0.00 0.00 0.00 2.83
800 810 3.181329 TCAGGGGCAGAGAGATTTGTTA 58.819 45.455 0.00 0.00 0.00 2.41
801 811 3.198635 TCAGGGGCAGAGAGATTTGTTAG 59.801 47.826 0.00 0.00 0.00 2.34
802 812 3.198635 CAGGGGCAGAGAGATTTGTTAGA 59.801 47.826 0.00 0.00 0.00 2.10
803 813 3.846588 AGGGGCAGAGAGATTTGTTAGAA 59.153 43.478 0.00 0.00 0.00 2.10
804 814 4.080638 AGGGGCAGAGAGATTTGTTAGAAG 60.081 45.833 0.00 0.00 0.00 2.85
805 815 4.195416 GGGCAGAGAGATTTGTTAGAAGG 58.805 47.826 0.00 0.00 0.00 3.46
806 816 4.080863 GGGCAGAGAGATTTGTTAGAAGGA 60.081 45.833 0.00 0.00 0.00 3.36
807 817 5.115480 GGCAGAGAGATTTGTTAGAAGGAG 58.885 45.833 0.00 0.00 0.00 3.69
808 818 5.115480 GCAGAGAGATTTGTTAGAAGGAGG 58.885 45.833 0.00 0.00 0.00 4.30
809 819 5.115480 CAGAGAGATTTGTTAGAAGGAGGC 58.885 45.833 0.00 0.00 0.00 4.70
810 820 4.163268 AGAGAGATTTGTTAGAAGGAGGCC 59.837 45.833 0.00 0.00 0.00 5.19
811 821 3.201045 AGAGATTTGTTAGAAGGAGGCCC 59.799 47.826 0.00 0.00 0.00 5.80
812 822 2.242452 AGATTTGTTAGAAGGAGGCCCC 59.758 50.000 0.00 0.00 0.00 5.80
813 823 0.326927 TTTGTTAGAAGGAGGCCCCG 59.673 55.000 0.00 0.00 40.87 5.73
814 824 0.838987 TTGTTAGAAGGAGGCCCCGT 60.839 55.000 0.00 0.00 40.87 5.28
815 825 0.041535 TGTTAGAAGGAGGCCCCGTA 59.958 55.000 0.00 0.00 40.87 4.02
816 826 1.197812 GTTAGAAGGAGGCCCCGTAA 58.802 55.000 0.00 0.00 40.87 3.18
817 827 1.556451 GTTAGAAGGAGGCCCCGTAAA 59.444 52.381 0.00 0.00 40.87 2.01
818 828 1.955451 TAGAAGGAGGCCCCGTAAAA 58.045 50.000 0.00 0.00 40.87 1.52
819 829 0.327259 AGAAGGAGGCCCCGTAAAAC 59.673 55.000 0.00 0.00 40.87 2.43
820 830 0.037160 GAAGGAGGCCCCGTAAAACA 59.963 55.000 0.00 0.00 40.87 2.83
821 831 0.251033 AAGGAGGCCCCGTAAAACAC 60.251 55.000 0.00 0.00 40.87 3.32
822 832 1.676635 GGAGGCCCCGTAAAACACC 60.677 63.158 0.00 0.00 0.00 4.16
823 833 1.676635 GAGGCCCCGTAAAACACCC 60.677 63.158 0.00 0.00 0.00 4.61
824 834 3.057548 GGCCCCGTAAAACACCCG 61.058 66.667 0.00 0.00 0.00 5.28
825 835 2.281692 GCCCCGTAAAACACCCGT 60.282 61.111 0.00 0.00 0.00 5.28
826 836 2.619165 GCCCCGTAAAACACCCGTG 61.619 63.158 0.00 0.00 0.00 4.94
827 837 1.071128 CCCCGTAAAACACCCGTGA 59.929 57.895 0.96 0.00 0.00 4.35
828 838 0.321830 CCCCGTAAAACACCCGTGAT 60.322 55.000 0.96 0.00 0.00 3.06
829 839 1.525941 CCCGTAAAACACCCGTGATT 58.474 50.000 0.96 0.00 0.00 2.57
830 840 1.465777 CCCGTAAAACACCCGTGATTC 59.534 52.381 0.96 0.00 0.00 2.52
831 841 2.419667 CCGTAAAACACCCGTGATTCT 58.580 47.619 0.96 0.00 0.00 2.40
832 842 2.414138 CCGTAAAACACCCGTGATTCTC 59.586 50.000 0.96 0.00 0.00 2.87
833 843 2.414138 CGTAAAACACCCGTGATTCTCC 59.586 50.000 0.96 0.00 0.00 3.71
834 844 1.519408 AAAACACCCGTGATTCTCCG 58.481 50.000 0.96 0.00 0.00 4.63
835 845 0.395312 AAACACCCGTGATTCTCCGT 59.605 50.000 0.96 0.00 0.00 4.69
836 846 0.320421 AACACCCGTGATTCTCCGTG 60.320 55.000 0.96 0.00 0.00 4.94
837 847 1.447838 CACCCGTGATTCTCCGTGG 60.448 63.158 0.00 0.00 0.00 4.94
838 848 1.911766 ACCCGTGATTCTCCGTGGT 60.912 57.895 0.00 0.00 0.00 4.16
839 849 1.153628 CCCGTGATTCTCCGTGGTC 60.154 63.158 0.00 0.00 0.00 4.02
840 850 1.605058 CCCGTGATTCTCCGTGGTCT 61.605 60.000 0.00 0.00 0.00 3.85
841 851 1.100510 CCGTGATTCTCCGTGGTCTA 58.899 55.000 0.00 0.00 0.00 2.59
894 904 4.103357 CAGGTTGATCTTACGGACTAACG 58.897 47.826 0.00 0.00 40.31 3.18
923 933 0.106894 GTGATTCCCCCGTGATCTCC 59.893 60.000 0.00 0.00 0.00 3.71
933 943 0.529992 CGTGATCTCCGGCTAAACCC 60.530 60.000 0.00 0.00 33.26 4.11
968 978 2.427245 CCACGATCGGCTCCTCCTT 61.427 63.158 20.98 0.00 0.00 3.36
1101 1120 0.601841 GGTCACACGTGTTCCGGATT 60.602 55.000 20.79 0.00 42.24 3.01
1254 1273 4.078922 TCCATCTCTCTCTACCTCAACCAT 60.079 45.833 0.00 0.00 0.00 3.55
1350 1369 2.605823 GCCATCGTGGACTAGATTCTCG 60.606 54.545 8.04 0.00 40.96 4.04
1499 1518 2.821366 CGTCACAGCTGGGATGCC 60.821 66.667 24.65 10.08 0.00 4.40
1771 1805 1.302351 GTGTGCAAGGCTCTGCTCT 60.302 57.895 18.03 0.00 43.07 4.09
1772 1806 1.302271 TGTGCAAGGCTCTGCTCTG 60.302 57.895 18.03 0.95 43.07 3.35
1784 1818 3.737663 GCTCTGCTCTGGTTCATCTACAG 60.738 52.174 0.00 0.00 0.00 2.74
1889 1926 0.512085 GAGCTGAAGCAGATATGCGC 59.488 55.000 6.68 0.00 45.16 6.09
2109 2147 2.513204 CAGATGGTGCGGCTGGAG 60.513 66.667 0.00 0.00 0.00 3.86
2140 2178 0.179200 CGGCGCAATGTACCAACTTC 60.179 55.000 10.83 0.00 0.00 3.01
2147 2185 5.519722 CGCAATGTACCAACTTCTTTTTCT 58.480 37.500 0.00 0.00 0.00 2.52
2148 2186 5.977129 CGCAATGTACCAACTTCTTTTTCTT 59.023 36.000 0.00 0.00 0.00 2.52
2155 2193 9.990360 TGTACCAACTTCTTTTTCTTTTCTTTT 57.010 25.926 0.00 0.00 0.00 2.27
2201 2244 3.120199 CCACGCACTTGACCTAATCTTTG 60.120 47.826 0.00 0.00 0.00 2.77
2263 2306 7.147672 GGATGTTCCTCCCATGTAATTTGATTT 60.148 37.037 0.00 0.00 32.53 2.17
2265 2308 6.953520 TGTTCCTCCCATGTAATTTGATTTCT 59.046 34.615 0.00 0.00 0.00 2.52
2333 2377 6.208599 CCCAAATAGAACACATGTTGTACCTT 59.791 38.462 1.07 0.00 37.51 3.50
2340 2384 7.231467 AGAACACATGTTGTACCTTCCTAATT 58.769 34.615 1.07 0.00 37.51 1.40
2347 2391 9.757227 CATGTTGTACCTTCCTAATTTTTGAAA 57.243 29.630 0.00 0.00 0.00 2.69
2360 2404 9.161629 CCTAATTTTTGAAACCCATTATTGTCC 57.838 33.333 0.00 0.00 0.00 4.02
2367 2411 6.498538 TGAAACCCATTATTGTCCCATTAGT 58.501 36.000 0.00 0.00 0.00 2.24
2371 2415 9.500701 AAACCCATTATTGTCCCATTAGTATTT 57.499 29.630 0.00 0.00 0.00 1.40
2372 2416 9.500701 AACCCATTATTGTCCCATTAGTATTTT 57.499 29.630 0.00 0.00 0.00 1.82
2373 2417 9.500701 ACCCATTATTGTCCCATTAGTATTTTT 57.499 29.630 0.00 0.00 0.00 1.94
2374 2418 9.762933 CCCATTATTGTCCCATTAGTATTTTTG 57.237 33.333 0.00 0.00 0.00 2.44
2380 2424 9.705290 ATTGTCCCATTAGTATTTTTGTTGAAC 57.295 29.630 0.00 0.00 0.00 3.18
2381 2425 7.364200 TGTCCCATTAGTATTTTTGTTGAACG 58.636 34.615 0.00 0.00 0.00 3.95
2382 2426 6.307077 GTCCCATTAGTATTTTTGTTGAACGC 59.693 38.462 0.00 0.00 0.00 4.84
2383 2427 5.575218 CCCATTAGTATTTTTGTTGAACGCC 59.425 40.000 0.00 0.00 0.00 5.68
2384 2428 6.153067 CCATTAGTATTTTTGTTGAACGCCA 58.847 36.000 0.00 0.00 0.00 5.69
2385 2429 6.307800 CCATTAGTATTTTTGTTGAACGCCAG 59.692 38.462 0.00 0.00 0.00 4.85
2386 2430 3.638484 AGTATTTTTGTTGAACGCCAGC 58.362 40.909 0.00 0.00 0.00 4.85
2387 2431 1.864565 ATTTTTGTTGAACGCCAGCC 58.135 45.000 0.00 0.00 0.00 4.85
2388 2432 0.179097 TTTTTGTTGAACGCCAGCCC 60.179 50.000 0.00 0.00 0.00 5.19
2389 2433 1.323271 TTTTGTTGAACGCCAGCCCA 61.323 50.000 0.00 0.00 0.00 5.36
2390 2434 1.112315 TTTGTTGAACGCCAGCCCAT 61.112 50.000 0.00 0.00 0.00 4.00
2391 2435 0.250945 TTGTTGAACGCCAGCCCATA 60.251 50.000 0.00 0.00 0.00 2.74
2392 2436 0.250945 TGTTGAACGCCAGCCCATAA 60.251 50.000 0.00 0.00 0.00 1.90
2393 2437 0.885196 GTTGAACGCCAGCCCATAAA 59.115 50.000 0.00 0.00 0.00 1.40
2394 2438 1.135402 GTTGAACGCCAGCCCATAAAG 60.135 52.381 0.00 0.00 0.00 1.85
2395 2439 0.326595 TGAACGCCAGCCCATAAAGA 59.673 50.000 0.00 0.00 0.00 2.52
2396 2440 1.017387 GAACGCCAGCCCATAAAGAG 58.983 55.000 0.00 0.00 0.00 2.85
2397 2441 1.032114 AACGCCAGCCCATAAAGAGC 61.032 55.000 0.00 0.00 0.00 4.09
2398 2442 2.537560 CGCCAGCCCATAAAGAGCG 61.538 63.158 0.00 0.00 35.82 5.03
2399 2443 1.153168 GCCAGCCCATAAAGAGCGA 60.153 57.895 0.00 0.00 0.00 4.93
2400 2444 1.162800 GCCAGCCCATAAAGAGCGAG 61.163 60.000 0.00 0.00 0.00 5.03
2401 2445 0.179000 CCAGCCCATAAAGAGCGAGT 59.821 55.000 0.00 0.00 0.00 4.18
2402 2446 1.412710 CCAGCCCATAAAGAGCGAGTA 59.587 52.381 0.00 0.00 0.00 2.59
2403 2447 2.546795 CCAGCCCATAAAGAGCGAGTAG 60.547 54.545 0.00 0.00 0.00 2.57
2404 2448 1.689273 AGCCCATAAAGAGCGAGTAGG 59.311 52.381 0.00 0.00 0.00 3.18
2405 2449 1.270358 GCCCATAAAGAGCGAGTAGGG 60.270 57.143 0.00 0.00 38.10 3.53
2406 2450 1.270358 CCCATAAAGAGCGAGTAGGGC 60.270 57.143 0.00 0.00 0.00 5.19
2407 2451 1.689273 CCATAAAGAGCGAGTAGGGCT 59.311 52.381 0.00 0.00 45.00 5.19
2413 2457 3.768633 AGCGAGTAGGGCTCAATTG 57.231 52.632 0.00 0.00 44.33 2.32
2414 2458 1.195115 AGCGAGTAGGGCTCAATTGA 58.805 50.000 8.12 8.12 44.33 2.57
2415 2459 1.134670 AGCGAGTAGGGCTCAATTGAC 60.135 52.381 3.38 1.87 44.33 3.18
2416 2460 1.941325 CGAGTAGGGCTCAATTGACC 58.059 55.000 3.38 10.82 44.33 4.02
2417 2461 1.802880 CGAGTAGGGCTCAATTGACCG 60.803 57.143 3.38 0.00 44.33 4.79
2418 2462 1.480954 GAGTAGGGCTCAATTGACCGA 59.519 52.381 3.38 0.00 43.58 4.69
2419 2463 1.482593 AGTAGGGCTCAATTGACCGAG 59.517 52.381 3.38 0.00 0.00 4.63
2426 2470 1.391485 CTCAATTGACCGAGCTGAACG 59.609 52.381 3.38 0.00 0.00 3.95
2427 2471 1.000394 TCAATTGACCGAGCTGAACGA 60.000 47.619 3.38 0.00 0.00 3.85
2428 2472 1.798223 CAATTGACCGAGCTGAACGAA 59.202 47.619 0.00 0.00 0.00 3.85
2429 2473 1.714794 ATTGACCGAGCTGAACGAAG 58.285 50.000 0.00 0.00 0.00 3.79
2431 2475 0.039437 TGACCGAGCTGAACGAAGTC 60.039 55.000 0.00 0.00 45.00 3.01
2432 2476 0.241481 GACCGAGCTGAACGAAGTCT 59.759 55.000 0.00 0.00 45.00 3.24
2433 2477 0.241481 ACCGAGCTGAACGAAGTCTC 59.759 55.000 0.00 0.00 45.00 3.36
2434 2478 0.241213 CCGAGCTGAACGAAGTCTCA 59.759 55.000 0.00 0.00 45.00 3.27
2435 2479 1.612156 CGAGCTGAACGAAGTCTCAG 58.388 55.000 0.00 0.00 45.00 3.35
2436 2480 1.068885 CGAGCTGAACGAAGTCTCAGT 60.069 52.381 0.00 0.00 45.00 3.41
2437 2481 2.605823 CGAGCTGAACGAAGTCTCAGTT 60.606 50.000 0.00 0.00 45.00 3.16
2438 2482 2.728839 GAGCTGAACGAAGTCTCAGTTG 59.271 50.000 0.00 0.00 45.00 3.16
2439 2483 1.193426 GCTGAACGAAGTCTCAGTTGC 59.807 52.381 0.00 0.00 45.00 4.17
2440 2484 2.473816 CTGAACGAAGTCTCAGTTGCA 58.526 47.619 0.00 0.00 45.00 4.08
2441 2485 2.473816 TGAACGAAGTCTCAGTTGCAG 58.526 47.619 0.00 0.00 45.00 4.41
2442 2486 1.795286 GAACGAAGTCTCAGTTGCAGG 59.205 52.381 0.00 0.00 45.00 4.85
2443 2487 1.040646 ACGAAGTCTCAGTTGCAGGA 58.959 50.000 0.00 0.00 29.74 3.86
2444 2488 1.269831 ACGAAGTCTCAGTTGCAGGAC 60.270 52.381 0.00 0.00 29.74 3.85
2445 2489 1.423395 GAAGTCTCAGTTGCAGGACG 58.577 55.000 0.00 0.00 34.34 4.79
2446 2490 0.753262 AAGTCTCAGTTGCAGGACGT 59.247 50.000 0.00 0.00 34.34 4.34
2447 2491 0.753262 AGTCTCAGTTGCAGGACGTT 59.247 50.000 0.00 0.00 34.34 3.99
2448 2492 1.961394 AGTCTCAGTTGCAGGACGTTA 59.039 47.619 0.00 0.00 34.34 3.18
2449 2493 2.059541 GTCTCAGTTGCAGGACGTTAC 58.940 52.381 0.00 0.00 0.00 2.50
2450 2494 1.000506 TCTCAGTTGCAGGACGTTACC 59.999 52.381 0.00 0.00 0.00 2.85
2451 2495 1.000955 CTCAGTTGCAGGACGTTACCT 59.999 52.381 0.00 0.00 41.43 3.08
2452 2496 2.230508 CTCAGTTGCAGGACGTTACCTA 59.769 50.000 0.00 0.00 38.32 3.08
2453 2497 2.829720 TCAGTTGCAGGACGTTACCTAT 59.170 45.455 0.00 0.00 38.32 2.57
2454 2498 3.259876 TCAGTTGCAGGACGTTACCTATT 59.740 43.478 0.00 0.00 38.32 1.73
2455 2499 4.000988 CAGTTGCAGGACGTTACCTATTT 58.999 43.478 0.00 0.00 38.32 1.40
2456 2500 4.454504 CAGTTGCAGGACGTTACCTATTTT 59.545 41.667 0.00 0.00 38.32 1.82
2457 2501 5.640357 CAGTTGCAGGACGTTACCTATTTTA 59.360 40.000 0.00 0.00 38.32 1.52
2458 2502 5.640783 AGTTGCAGGACGTTACCTATTTTAC 59.359 40.000 0.00 0.00 38.32 2.01
2459 2503 5.149973 TGCAGGACGTTACCTATTTTACA 57.850 39.130 0.00 0.00 38.32 2.41
2460 2504 5.736813 TGCAGGACGTTACCTATTTTACAT 58.263 37.500 0.00 0.00 38.32 2.29
2461 2505 6.174760 TGCAGGACGTTACCTATTTTACATT 58.825 36.000 0.00 0.00 38.32 2.71
2462 2506 7.329499 TGCAGGACGTTACCTATTTTACATTA 58.671 34.615 0.00 0.00 38.32 1.90
2463 2507 7.823310 TGCAGGACGTTACCTATTTTACATTAA 59.177 33.333 0.00 0.00 38.32 1.40
2464 2508 8.667463 GCAGGACGTTACCTATTTTACATTAAA 58.333 33.333 0.00 0.00 38.32 1.52
2467 2511 9.773328 GGACGTTACCTATTTTACATTAAAACC 57.227 33.333 0.00 0.00 40.12 3.27
2468 2512 9.773328 GACGTTACCTATTTTACATTAAAACCC 57.227 33.333 0.00 0.00 40.12 4.11
2469 2513 8.739039 ACGTTACCTATTTTACATTAAAACCCC 58.261 33.333 0.00 0.00 40.12 4.95
2470 2514 8.959548 CGTTACCTATTTTACATTAAAACCCCT 58.040 33.333 0.00 0.00 40.12 4.79
2479 2523 7.733402 TTACATTAAAACCCCTATATGACGC 57.267 36.000 0.00 0.00 0.00 5.19
2480 2524 5.686753 ACATTAAAACCCCTATATGACGCA 58.313 37.500 0.00 0.00 0.00 5.24
2481 2525 6.303839 ACATTAAAACCCCTATATGACGCAT 58.696 36.000 0.00 0.00 0.00 4.73
2482 2526 6.775629 ACATTAAAACCCCTATATGACGCATT 59.224 34.615 0.00 0.00 0.00 3.56
2483 2527 7.286775 ACATTAAAACCCCTATATGACGCATTT 59.713 33.333 0.00 0.00 0.00 2.32
2484 2528 7.648039 TTAAAACCCCTATATGACGCATTTT 57.352 32.000 0.00 0.00 0.00 1.82
2485 2529 5.514274 AAACCCCTATATGACGCATTTTG 57.486 39.130 0.00 0.00 0.00 2.44
2486 2530 2.884639 ACCCCTATATGACGCATTTTGC 59.115 45.455 0.00 0.00 40.69 3.68
2487 2531 2.884012 CCCCTATATGACGCATTTTGCA 59.116 45.455 0.00 0.00 45.36 4.08
2488 2532 3.304659 CCCCTATATGACGCATTTTGCAC 60.305 47.826 0.00 0.00 45.36 4.57
2489 2533 3.544651 CCTATATGACGCATTTTGCACG 58.455 45.455 0.00 0.00 45.36 5.34
2490 2534 1.826327 ATATGACGCATTTTGCACGC 58.174 45.000 0.00 0.00 45.36 5.34
2491 2535 0.519077 TATGACGCATTTTGCACGCA 59.481 45.000 0.00 0.00 45.36 5.24
2492 2536 1.003262 ATGACGCATTTTGCACGCAC 61.003 50.000 0.00 0.00 45.36 5.34
2493 2537 2.696521 GACGCATTTTGCACGCACG 61.697 57.895 0.00 0.00 45.36 5.34
2494 2538 2.725450 CGCATTTTGCACGCACGT 60.725 55.556 0.00 0.00 45.36 4.49
2495 2539 2.696521 CGCATTTTGCACGCACGTC 61.697 57.895 0.00 0.00 45.36 4.34
2496 2540 2.696521 GCATTTTGCACGCACGTCG 61.697 57.895 0.00 5.97 44.26 5.12
2497 2541 2.074353 CATTTTGCACGCACGTCGG 61.074 57.895 11.13 0.00 43.86 4.79
2498 2542 3.872409 ATTTTGCACGCACGTCGGC 62.872 57.895 11.13 11.09 43.86 5.54
2512 2556 3.289128 TCGGCCATCGAGCAATTAG 57.711 52.632 2.24 0.00 43.74 1.73
2513 2557 0.880278 TCGGCCATCGAGCAATTAGC 60.880 55.000 2.24 0.00 43.74 3.09
2530 2574 4.247781 CTGGGCCAGCCAGTTATG 57.752 61.111 22.68 0.00 37.98 1.90
2540 2584 3.575506 CCAGTTATGGCTTCCAGCA 57.424 52.632 0.00 0.00 44.75 4.41
2541 2585 1.838112 CCAGTTATGGCTTCCAGCAA 58.162 50.000 0.00 0.00 44.75 3.91
2542 2586 2.381911 CCAGTTATGGCTTCCAGCAAT 58.618 47.619 0.00 0.00 44.75 3.56
2543 2587 2.360165 CCAGTTATGGCTTCCAGCAATC 59.640 50.000 0.00 0.00 44.75 2.67
2544 2588 2.360165 CAGTTATGGCTTCCAGCAATCC 59.640 50.000 0.00 0.00 44.75 3.01
2545 2589 1.683385 GTTATGGCTTCCAGCAATCCC 59.317 52.381 0.00 0.00 44.75 3.85
2546 2590 0.179020 TATGGCTTCCAGCAATCCCG 60.179 55.000 0.00 0.00 44.75 5.14
2547 2591 2.830370 GGCTTCCAGCAATCCCGG 60.830 66.667 0.00 0.00 44.75 5.73
2548 2592 2.044946 GCTTCCAGCAATCCCGGT 60.045 61.111 0.00 0.00 41.89 5.28
2549 2593 1.678970 GCTTCCAGCAATCCCGGTT 60.679 57.895 0.00 0.00 41.89 4.44
2550 2594 1.250840 GCTTCCAGCAATCCCGGTTT 61.251 55.000 0.00 0.00 41.89 3.27
2551 2595 1.256812 CTTCCAGCAATCCCGGTTTT 58.743 50.000 0.00 0.00 0.00 2.43
2552 2596 0.965439 TTCCAGCAATCCCGGTTTTG 59.035 50.000 0.00 4.88 0.00 2.44
2553 2597 0.897863 TCCAGCAATCCCGGTTTTGG 60.898 55.000 13.63 7.10 0.00 3.28
2565 2609 4.216411 CCGGTTTTGGGAATCTTCTAGA 57.784 45.455 0.00 0.00 0.00 2.43
2566 2610 4.585879 CCGGTTTTGGGAATCTTCTAGAA 58.414 43.478 4.81 4.81 0.00 2.10
2567 2611 4.636206 CCGGTTTTGGGAATCTTCTAGAAG 59.364 45.833 24.10 24.10 39.71 2.85
2568 2612 4.636206 CGGTTTTGGGAATCTTCTAGAAGG 59.364 45.833 28.09 12.77 38.88 3.46
2569 2613 5.571285 GGTTTTGGGAATCTTCTAGAAGGT 58.429 41.667 28.09 21.31 38.88 3.50
2570 2614 6.010850 GGTTTTGGGAATCTTCTAGAAGGTT 58.989 40.000 27.34 27.34 43.87 3.50
2571 2615 6.493802 GGTTTTGGGAATCTTCTAGAAGGTTT 59.506 38.462 27.59 21.64 41.47 3.27
2572 2616 7.015292 GGTTTTGGGAATCTTCTAGAAGGTTTT 59.985 37.037 27.59 19.56 41.47 2.43
2573 2617 7.761038 TTTGGGAATCTTCTAGAAGGTTTTC 57.239 36.000 27.59 24.47 41.47 2.29
2574 2618 6.448369 TGGGAATCTTCTAGAAGGTTTTCA 57.552 37.500 27.59 23.80 41.47 2.69
2575 2619 6.848069 TGGGAATCTTCTAGAAGGTTTTCAA 58.152 36.000 27.59 16.00 41.47 2.69
2576 2620 6.942576 TGGGAATCTTCTAGAAGGTTTTCAAG 59.057 38.462 27.59 4.37 41.47 3.02
2577 2621 6.127869 GGGAATCTTCTAGAAGGTTTTCAAGC 60.128 42.308 27.59 15.66 41.47 4.01
2578 2622 6.657117 GGAATCTTCTAGAAGGTTTTCAAGCT 59.343 38.462 27.59 7.17 41.47 3.74
2579 2623 7.361628 GGAATCTTCTAGAAGGTTTTCAAGCTG 60.362 40.741 27.59 3.21 41.47 4.24
2580 2624 5.308825 TCTTCTAGAAGGTTTTCAAGCTGG 58.691 41.667 28.09 2.86 39.57 4.85
2581 2625 4.706842 TCTAGAAGGTTTTCAAGCTGGT 57.293 40.909 0.00 0.00 39.57 4.00
2582 2626 5.048846 TCTAGAAGGTTTTCAAGCTGGTT 57.951 39.130 0.00 0.00 39.57 3.67
2583 2627 5.445964 TCTAGAAGGTTTTCAAGCTGGTTT 58.554 37.500 0.00 0.00 39.57 3.27
2584 2628 5.891551 TCTAGAAGGTTTTCAAGCTGGTTTT 59.108 36.000 0.00 0.00 39.57 2.43
2585 2629 5.420725 AGAAGGTTTTCAAGCTGGTTTTT 57.579 34.783 0.00 0.00 39.57 1.94
2586 2630 6.538945 AGAAGGTTTTCAAGCTGGTTTTTA 57.461 33.333 0.00 0.00 39.57 1.52
2587 2631 6.338146 AGAAGGTTTTCAAGCTGGTTTTTAC 58.662 36.000 0.00 0.00 39.57 2.01
2588 2632 5.018539 AGGTTTTCAAGCTGGTTTTTACC 57.981 39.130 0.00 0.00 37.93 2.85
2589 2633 4.124238 GGTTTTCAAGCTGGTTTTTACCC 58.876 43.478 0.00 0.00 0.00 3.69
2590 2634 4.141801 GGTTTTCAAGCTGGTTTTTACCCT 60.142 41.667 0.00 0.00 0.00 4.34
2591 2635 5.424757 GTTTTCAAGCTGGTTTTTACCCTT 58.575 37.500 0.00 0.00 0.00 3.95
2592 2636 5.685520 TTTCAAGCTGGTTTTTACCCTTT 57.314 34.783 0.00 0.00 0.00 3.11
2593 2637 5.685520 TTCAAGCTGGTTTTTACCCTTTT 57.314 34.783 0.00 0.00 0.00 2.27
2594 2638 5.270893 TCAAGCTGGTTTTTACCCTTTTC 57.729 39.130 0.00 0.00 0.00 2.29
2595 2639 4.048504 CAAGCTGGTTTTTACCCTTTTCG 58.951 43.478 0.00 0.00 0.00 3.46
2596 2640 2.626266 AGCTGGTTTTTACCCTTTTCGG 59.374 45.455 0.00 0.00 0.00 4.30
2630 2674 1.557099 GTTCCTGAACCATTTCCCCC 58.443 55.000 0.00 0.00 35.36 5.40
2631 2675 1.077169 GTTCCTGAACCATTTCCCCCT 59.923 52.381 0.00 0.00 35.36 4.79
2632 2676 1.466858 TCCTGAACCATTTCCCCCTT 58.533 50.000 0.00 0.00 0.00 3.95
2633 2677 1.792651 TCCTGAACCATTTCCCCCTTT 59.207 47.619 0.00 0.00 0.00 3.11
2634 2678 2.181196 TCCTGAACCATTTCCCCCTTTT 59.819 45.455 0.00 0.00 0.00 2.27
2635 2679 3.403051 TCCTGAACCATTTCCCCCTTTTA 59.597 43.478 0.00 0.00 0.00 1.52
2636 2680 3.513912 CCTGAACCATTTCCCCCTTTTAC 59.486 47.826 0.00 0.00 0.00 2.01
2637 2681 4.416516 CTGAACCATTTCCCCCTTTTACT 58.583 43.478 0.00 0.00 0.00 2.24
2638 2682 4.156477 TGAACCATTTCCCCCTTTTACTG 58.844 43.478 0.00 0.00 0.00 2.74
2639 2683 3.184382 ACCATTTCCCCCTTTTACTGG 57.816 47.619 0.00 0.00 0.00 4.00
2640 2684 2.453212 ACCATTTCCCCCTTTTACTGGT 59.547 45.455 0.00 0.00 0.00 4.00
2641 2685 3.116512 ACCATTTCCCCCTTTTACTGGTT 60.117 43.478 0.00 0.00 31.94 3.67
2642 2686 3.907474 CCATTTCCCCCTTTTACTGGTTT 59.093 43.478 0.00 0.00 0.00 3.27
2643 2687 4.349636 CCATTTCCCCCTTTTACTGGTTTT 59.650 41.667 0.00 0.00 0.00 2.43
2644 2688 5.163141 CCATTTCCCCCTTTTACTGGTTTTT 60.163 40.000 0.00 0.00 0.00 1.94
2645 2689 6.043358 CCATTTCCCCCTTTTACTGGTTTTTA 59.957 38.462 0.00 0.00 0.00 1.52
2646 2690 7.256871 CCATTTCCCCCTTTTACTGGTTTTTAT 60.257 37.037 0.00 0.00 0.00 1.40
2647 2691 6.921486 TTCCCCCTTTTACTGGTTTTTATC 57.079 37.500 0.00 0.00 0.00 1.75
2648 2692 5.335261 TCCCCCTTTTACTGGTTTTTATCC 58.665 41.667 0.00 0.00 0.00 2.59
2649 2693 4.468510 CCCCCTTTTACTGGTTTTTATCCC 59.531 45.833 0.00 0.00 0.00 3.85
2650 2694 4.468510 CCCCTTTTACTGGTTTTTATCCCC 59.531 45.833 0.00 0.00 0.00 4.81
2651 2695 5.338632 CCCTTTTACTGGTTTTTATCCCCT 58.661 41.667 0.00 0.00 0.00 4.79
2652 2696 5.421056 CCCTTTTACTGGTTTTTATCCCCTC 59.579 44.000 0.00 0.00 0.00 4.30
2653 2697 6.014012 CCTTTTACTGGTTTTTATCCCCTCA 58.986 40.000 0.00 0.00 0.00 3.86
2654 2698 6.667848 CCTTTTACTGGTTTTTATCCCCTCAT 59.332 38.462 0.00 0.00 0.00 2.90
2655 2699 7.180229 CCTTTTACTGGTTTTTATCCCCTCATT 59.820 37.037 0.00 0.00 0.00 2.57
2656 2700 8.499288 TTTTACTGGTTTTTATCCCCTCATTT 57.501 30.769 0.00 0.00 0.00 2.32
2657 2701 9.603189 TTTTACTGGTTTTTATCCCCTCATTTA 57.397 29.630 0.00 0.00 0.00 1.40
2658 2702 9.777008 TTTACTGGTTTTTATCCCCTCATTTAT 57.223 29.630 0.00 0.00 0.00 1.40
2659 2703 9.777008 TTACTGGTTTTTATCCCCTCATTTATT 57.223 29.630 0.00 0.00 0.00 1.40
2660 2704 8.679344 ACTGGTTTTTATCCCCTCATTTATTT 57.321 30.769 0.00 0.00 0.00 1.40
2661 2705 8.539544 ACTGGTTTTTATCCCCTCATTTATTTG 58.460 33.333 0.00 0.00 0.00 2.32
2662 2706 8.442660 TGGTTTTTATCCCCTCATTTATTTGT 57.557 30.769 0.00 0.00 0.00 2.83
2663 2707 8.885346 TGGTTTTTATCCCCTCATTTATTTGTT 58.115 29.630 0.00 0.00 0.00 2.83
2664 2708 9.733556 GGTTTTTATCCCCTCATTTATTTGTTT 57.266 29.630 0.00 0.00 0.00 2.83
2671 2715 8.669946 TCCCCTCATTTATTTGTTTTGTTTTC 57.330 30.769 0.00 0.00 0.00 2.29
2672 2716 8.490311 TCCCCTCATTTATTTGTTTTGTTTTCT 58.510 29.630 0.00 0.00 0.00 2.52
2673 2717 8.773645 CCCCTCATTTATTTGTTTTGTTTTCTC 58.226 33.333 0.00 0.00 0.00 2.87
2674 2718 9.546428 CCCTCATTTATTTGTTTTGTTTTCTCT 57.454 29.630 0.00 0.00 0.00 3.10
2760 2804 9.750125 AAACAATCCAGAATTTAAGACTTGTTC 57.250 29.630 0.00 0.40 34.30 3.18
2761 2805 8.463930 ACAATCCAGAATTTAAGACTTGTTCA 57.536 30.769 0.00 0.00 0.00 3.18
2762 2806 8.571336 ACAATCCAGAATTTAAGACTTGTTCAG 58.429 33.333 0.00 0.00 0.00 3.02
2763 2807 8.786898 CAATCCAGAATTTAAGACTTGTTCAGA 58.213 33.333 0.00 2.58 0.00 3.27
2764 2808 8.924511 ATCCAGAATTTAAGACTTGTTCAGAA 57.075 30.769 0.00 0.00 0.00 3.02
2765 2809 8.154649 TCCAGAATTTAAGACTTGTTCAGAAC 57.845 34.615 6.32 6.32 0.00 3.01
2766 2810 7.993183 TCCAGAATTTAAGACTTGTTCAGAACT 59.007 33.333 14.51 0.00 0.00 3.01
2767 2811 8.624776 CCAGAATTTAAGACTTGTTCAGAACTT 58.375 33.333 14.51 2.76 0.00 2.66
2816 2860 8.880878 AAGTGTTGTTGTCTTTTAAAAACTGT 57.119 26.923 1.66 0.00 0.00 3.55
2817 2861 8.880878 AGTGTTGTTGTCTTTTAAAAACTGTT 57.119 26.923 1.66 0.00 0.00 3.16
2818 2862 8.974408 AGTGTTGTTGTCTTTTAAAAACTGTTC 58.026 29.630 1.66 0.00 0.00 3.18
2819 2863 7.942538 GTGTTGTTGTCTTTTAAAAACTGTTCG 59.057 33.333 1.66 0.00 0.00 3.95
2820 2864 6.620253 TGTTGTCTTTTAAAAACTGTTCGC 57.380 33.333 1.66 0.00 0.00 4.70
2821 2865 6.150318 TGTTGTCTTTTAAAAACTGTTCGCA 58.850 32.000 1.66 0.00 0.00 5.10
2822 2866 6.809196 TGTTGTCTTTTAAAAACTGTTCGCAT 59.191 30.769 1.66 0.00 0.00 4.73
2823 2867 7.329717 TGTTGTCTTTTAAAAACTGTTCGCATT 59.670 29.630 1.66 0.00 0.00 3.56
2824 2868 7.820044 TGTCTTTTAAAAACTGTTCGCATTT 57.180 28.000 1.66 0.00 0.00 2.32
2825 2869 8.245701 TGTCTTTTAAAAACTGTTCGCATTTT 57.754 26.923 1.66 0.00 32.39 1.82
2826 2870 8.165428 TGTCTTTTAAAAACTGTTCGCATTTTG 58.835 29.630 1.66 0.00 31.62 2.44
2827 2871 7.634432 GTCTTTTAAAAACTGTTCGCATTTTGG 59.366 33.333 1.66 0.00 31.62 3.28
2828 2872 7.545965 TCTTTTAAAAACTGTTCGCATTTTGGA 59.454 29.630 1.66 0.00 31.62 3.53
2829 2873 7.596749 TTTAAAAACTGTTCGCATTTTGGAA 57.403 28.000 0.00 0.00 31.62 3.53
2830 2874 7.596749 TTAAAAACTGTTCGCATTTTGGAAA 57.403 28.000 0.00 0.00 31.62 3.13
2831 2875 6.487689 AAAAACTGTTCGCATTTTGGAAAA 57.512 29.167 0.00 0.00 31.62 2.29
2832 2876 6.487689 AAAACTGTTCGCATTTTGGAAAAA 57.512 29.167 0.00 0.00 31.62 1.94
2872 2916 7.678947 TTTTTGGAAATTTCAAAAGTGCTCA 57.321 28.000 17.95 2.98 42.59 4.26
2873 2917 6.660887 TTTGGAAATTTCAAAAGTGCTCAC 57.339 33.333 19.49 0.00 32.01 3.51
2874 2918 5.336150 TGGAAATTTCAAAAGTGCTCACA 57.664 34.783 19.49 1.40 0.00 3.58
2875 2919 5.916318 TGGAAATTTCAAAAGTGCTCACAT 58.084 33.333 19.49 0.00 0.00 3.21
2876 2920 6.347696 TGGAAATTTCAAAAGTGCTCACATT 58.652 32.000 19.49 0.00 0.00 2.71
2877 2921 6.822676 TGGAAATTTCAAAAGTGCTCACATTT 59.177 30.769 19.49 0.27 33.14 2.32
2878 2922 7.336427 TGGAAATTTCAAAAGTGCTCACATTTT 59.664 29.630 19.49 4.19 37.32 1.82
2879 2923 8.183536 GGAAATTTCAAAAGTGCTCACATTTTT 58.816 29.630 19.49 0.00 43.93 1.94
2880 2924 9.213819 GAAATTTCAAAAGTGCTCACATTTTTC 57.786 29.630 13.40 0.92 41.98 2.29
2881 2925 7.846644 ATTTCAAAAGTGCTCACATTTTTCA 57.153 28.000 2.63 0.00 41.98 2.69
2882 2926 7.664082 TTTCAAAAGTGCTCACATTTTTCAA 57.336 28.000 2.63 0.00 41.98 2.69
2883 2927 7.664082 TTCAAAAGTGCTCACATTTTTCAAA 57.336 28.000 2.63 0.00 41.98 2.69
2884 2928 7.664082 TCAAAAGTGCTCACATTTTTCAAAA 57.336 28.000 2.63 0.00 41.98 2.44
2885 2929 8.092521 TCAAAAGTGCTCACATTTTTCAAAAA 57.907 26.923 0.00 0.00 41.98 1.94
2886 2930 8.728833 TCAAAAGTGCTCACATTTTTCAAAAAT 58.271 25.926 1.98 1.98 41.98 1.82
2887 2931 9.344309 CAAAAGTGCTCACATTTTTCAAAAATT 57.656 25.926 5.29 0.00 41.98 1.82
2888 2932 8.898983 AAAGTGCTCACATTTTTCAAAAATTG 57.101 26.923 5.29 8.02 32.31 2.32
2889 2933 7.614124 AGTGCTCACATTTTTCAAAAATTGT 57.386 28.000 5.29 8.48 40.85 2.71
2890 2934 8.042944 AGTGCTCACATTTTTCAAAAATTGTT 57.957 26.923 5.29 0.00 39.23 2.83
2891 2935 8.177013 AGTGCTCACATTTTTCAAAAATTGTTC 58.823 29.630 5.29 5.67 39.23 3.18
2892 2936 7.429051 GTGCTCACATTTTTCAAAAATTGTTCC 59.571 33.333 5.29 0.00 39.23 3.62
2893 2937 6.912051 GCTCACATTTTTCAAAAATTGTTCCC 59.088 34.615 5.29 0.53 39.23 3.97
2894 2938 7.414984 GCTCACATTTTTCAAAAATTGTTCCCA 60.415 33.333 5.29 0.00 39.23 4.37
2895 2939 7.983307 TCACATTTTTCAAAAATTGTTCCCAG 58.017 30.769 5.29 0.00 39.23 4.45
2896 2940 7.609532 TCACATTTTTCAAAAATTGTTCCCAGT 59.390 29.630 5.29 0.00 39.23 4.00
2897 2941 8.242739 CACATTTTTCAAAAATTGTTCCCAGTT 58.757 29.630 5.29 0.00 39.23 3.16
2898 2942 8.801299 ACATTTTTCAAAAATTGTTCCCAGTTT 58.199 25.926 5.29 0.00 38.56 2.66
2905 2949 9.898152 TCAAAAATTGTTCCCAGTTTAATTTCT 57.102 25.926 0.00 0.00 31.11 2.52
2911 2955 9.898152 ATTGTTCCCAGTTTAATTTCTTTTTCA 57.102 25.926 0.00 0.00 0.00 2.69
2912 2956 9.898152 TTGTTCCCAGTTTAATTTCTTTTTCAT 57.102 25.926 0.00 0.00 0.00 2.57
2913 2957 9.323985 TGTTCCCAGTTTAATTTCTTTTTCATG 57.676 29.630 0.00 0.00 0.00 3.07
2914 2958 9.541143 GTTCCCAGTTTAATTTCTTTTTCATGA 57.459 29.630 0.00 0.00 0.00 3.07
2949 2993 7.712264 TGTTGCATTTTCTAAATTGTTCAGG 57.288 32.000 0.00 0.00 0.00 3.86
2950 2994 7.495901 TGTTGCATTTTCTAAATTGTTCAGGA 58.504 30.769 0.00 0.00 0.00 3.86
2951 2995 7.984050 TGTTGCATTTTCTAAATTGTTCAGGAA 59.016 29.630 0.00 0.00 0.00 3.36
2952 2996 8.992073 GTTGCATTTTCTAAATTGTTCAGGAAT 58.008 29.630 0.00 0.00 0.00 3.01
2953 2997 9.558396 TTGCATTTTCTAAATTGTTCAGGAATT 57.442 25.926 0.00 0.00 0.00 2.17
2954 2998 9.558396 TGCATTTTCTAAATTGTTCAGGAATTT 57.442 25.926 0.00 0.00 36.98 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
143 144 1.748879 GCCACGCCATCCTTGCTTA 60.749 57.895 0.00 0.00 0.00 3.09
352 359 1.613255 CCCCACCATGACTAAAACGCT 60.613 52.381 0.00 0.00 0.00 5.07
481 488 4.251760 CGGCTCCATCGCTGATAC 57.748 61.111 0.00 0.00 38.57 2.24
503 510 0.324368 ATCACCACCTCACCGAGCTA 60.324 55.000 0.00 0.00 0.00 3.32
587 596 6.976925 CAGAACATCTTTGAGCTTGACTTTTT 59.023 34.615 0.00 0.00 0.00 1.94
588 597 6.501781 CAGAACATCTTTGAGCTTGACTTTT 58.498 36.000 0.00 0.00 0.00 2.27
589 598 5.506982 GCAGAACATCTTTGAGCTTGACTTT 60.507 40.000 0.00 0.00 0.00 2.66
590 599 4.023365 GCAGAACATCTTTGAGCTTGACTT 60.023 41.667 0.00 0.00 0.00 3.01
591 600 3.501445 GCAGAACATCTTTGAGCTTGACT 59.499 43.478 0.00 0.00 0.00 3.41
627 636 2.661675 CACGTAAAGACCGACATGACAG 59.338 50.000 0.00 0.00 0.00 3.51
704 714 2.604914 CTCAACTCATCCGTGAAATCCG 59.395 50.000 0.00 0.00 33.05 4.18
705 715 2.939103 CCTCAACTCATCCGTGAAATCC 59.061 50.000 0.00 0.00 33.05 3.01
707 717 3.338249 CACCTCAACTCATCCGTGAAAT 58.662 45.455 0.00 0.00 33.05 2.17
708 718 2.549992 CCACCTCAACTCATCCGTGAAA 60.550 50.000 0.00 0.00 33.05 2.69
709 719 1.001974 CCACCTCAACTCATCCGTGAA 59.998 52.381 0.00 0.00 33.05 3.18
710 720 0.608130 CCACCTCAACTCATCCGTGA 59.392 55.000 0.00 0.00 0.00 4.35
711 721 0.608130 TCCACCTCAACTCATCCGTG 59.392 55.000 0.00 0.00 0.00 4.94
712 722 0.608640 GTCCACCTCAACTCATCCGT 59.391 55.000 0.00 0.00 0.00 4.69
713 723 0.108138 GGTCCACCTCAACTCATCCG 60.108 60.000 0.00 0.00 0.00 4.18
714 724 0.984230 TGGTCCACCTCAACTCATCC 59.016 55.000 0.00 0.00 36.82 3.51
715 725 2.859165 TTGGTCCACCTCAACTCATC 57.141 50.000 0.00 0.00 36.82 2.92
716 726 4.104086 TCTATTGGTCCACCTCAACTCAT 58.896 43.478 0.00 0.00 36.82 2.90
717 727 3.516586 TCTATTGGTCCACCTCAACTCA 58.483 45.455 0.00 0.00 36.82 3.41
718 728 4.553330 TTCTATTGGTCCACCTCAACTC 57.447 45.455 0.00 0.00 36.82 3.01
719 729 5.256474 CAATTCTATTGGTCCACCTCAACT 58.744 41.667 0.00 0.00 36.82 3.16
720 730 4.142381 GCAATTCTATTGGTCCACCTCAAC 60.142 45.833 0.00 0.00 36.82 3.18
721 731 4.016444 GCAATTCTATTGGTCCACCTCAA 58.984 43.478 0.00 0.00 36.82 3.02
722 732 3.620488 GCAATTCTATTGGTCCACCTCA 58.380 45.455 0.00 0.00 36.82 3.86
723 733 2.614057 CGCAATTCTATTGGTCCACCTC 59.386 50.000 0.00 0.00 36.82 3.85
724 734 2.238646 TCGCAATTCTATTGGTCCACCT 59.761 45.455 0.00 0.00 36.82 4.00
725 735 2.639065 TCGCAATTCTATTGGTCCACC 58.361 47.619 0.00 0.00 0.00 4.61
726 736 4.900635 ATTCGCAATTCTATTGGTCCAC 57.099 40.909 0.00 0.00 0.00 4.02
727 737 5.530915 CCTAATTCGCAATTCTATTGGTCCA 59.469 40.000 0.00 0.00 32.38 4.02
728 738 5.763204 TCCTAATTCGCAATTCTATTGGTCC 59.237 40.000 1.99 0.00 32.38 4.46
729 739 6.706270 TCTCCTAATTCGCAATTCTATTGGTC 59.294 38.462 1.99 0.00 32.38 4.02
730 740 6.483640 GTCTCCTAATTCGCAATTCTATTGGT 59.516 38.462 1.99 0.00 32.38 3.67
731 741 6.346919 CGTCTCCTAATTCGCAATTCTATTGG 60.347 42.308 1.99 0.00 32.38 3.16
732 742 6.420903 TCGTCTCCTAATTCGCAATTCTATTG 59.579 38.462 0.00 0.00 32.38 1.90
733 743 6.513180 TCGTCTCCTAATTCGCAATTCTATT 58.487 36.000 0.00 0.00 32.38 1.73
734 744 6.085555 TCGTCTCCTAATTCGCAATTCTAT 57.914 37.500 0.00 0.00 32.38 1.98
735 745 5.509716 TCGTCTCCTAATTCGCAATTCTA 57.490 39.130 0.00 0.00 32.38 2.10
736 746 4.386867 TCGTCTCCTAATTCGCAATTCT 57.613 40.909 0.00 0.00 32.38 2.40
737 747 4.025647 CCTTCGTCTCCTAATTCGCAATTC 60.026 45.833 0.00 0.00 32.38 2.17
738 748 3.871594 CCTTCGTCTCCTAATTCGCAATT 59.128 43.478 0.00 0.00 34.90 2.32
739 749 3.458189 CCTTCGTCTCCTAATTCGCAAT 58.542 45.455 0.00 0.00 0.00 3.56
740 750 2.418197 CCCTTCGTCTCCTAATTCGCAA 60.418 50.000 0.00 0.00 0.00 4.85
741 751 1.136305 CCCTTCGTCTCCTAATTCGCA 59.864 52.381 0.00 0.00 0.00 5.10
742 752 1.854227 CCCTTCGTCTCCTAATTCGC 58.146 55.000 0.00 0.00 0.00 4.70
743 753 1.538419 GGCCCTTCGTCTCCTAATTCG 60.538 57.143 0.00 0.00 0.00 3.34
744 754 1.202663 GGGCCCTTCGTCTCCTAATTC 60.203 57.143 17.04 0.00 0.00 2.17
745 755 0.837940 GGGCCCTTCGTCTCCTAATT 59.162 55.000 17.04 0.00 0.00 1.40
746 756 1.400530 CGGGCCCTTCGTCTCCTAAT 61.401 60.000 22.43 0.00 0.00 1.73
747 757 2.056223 CGGGCCCTTCGTCTCCTAA 61.056 63.158 22.43 0.00 0.00 2.69
748 758 2.441532 CGGGCCCTTCGTCTCCTA 60.442 66.667 22.43 0.00 0.00 2.94
751 761 4.162690 ATGCGGGCCCTTCGTCTC 62.163 66.667 22.43 0.24 0.00 3.36
752 762 4.162690 GATGCGGGCCCTTCGTCT 62.163 66.667 22.43 0.00 0.00 4.18
760 770 3.955543 TTTTCAGGGGATGCGGGCC 62.956 63.158 0.00 0.00 0.00 5.80
761 771 1.738346 GATTTTCAGGGGATGCGGGC 61.738 60.000 0.00 0.00 0.00 6.13
762 772 0.395586 TGATTTTCAGGGGATGCGGG 60.396 55.000 0.00 0.00 0.00 6.13
763 773 1.027357 CTGATTTTCAGGGGATGCGG 58.973 55.000 0.00 0.00 40.71 5.69
772 782 2.238144 TCTCTCTGCCCCTGATTTTCAG 59.762 50.000 0.00 0.00 43.91 3.02
773 783 2.269023 TCTCTCTGCCCCTGATTTTCA 58.731 47.619 0.00 0.00 0.00 2.69
774 784 3.574354 ATCTCTCTGCCCCTGATTTTC 57.426 47.619 0.00 0.00 0.00 2.29
775 785 4.021916 CAAATCTCTCTGCCCCTGATTTT 58.978 43.478 0.00 0.00 35.84 1.82
776 786 3.011032 ACAAATCTCTCTGCCCCTGATTT 59.989 43.478 0.00 0.00 37.70 2.17
777 787 2.579860 ACAAATCTCTCTGCCCCTGATT 59.420 45.455 0.00 0.00 0.00 2.57
778 788 2.203584 ACAAATCTCTCTGCCCCTGAT 58.796 47.619 0.00 0.00 0.00 2.90
779 789 1.661463 ACAAATCTCTCTGCCCCTGA 58.339 50.000 0.00 0.00 0.00 3.86
780 790 2.503895 AACAAATCTCTCTGCCCCTG 57.496 50.000 0.00 0.00 0.00 4.45
781 791 3.454858 TCTAACAAATCTCTCTGCCCCT 58.545 45.455 0.00 0.00 0.00 4.79
782 792 3.914426 TCTAACAAATCTCTCTGCCCC 57.086 47.619 0.00 0.00 0.00 5.80
783 793 4.080863 TCCTTCTAACAAATCTCTCTGCCC 60.081 45.833 0.00 0.00 0.00 5.36
784 794 5.091261 TCCTTCTAACAAATCTCTCTGCC 57.909 43.478 0.00 0.00 0.00 4.85
785 795 5.115480 CCTCCTTCTAACAAATCTCTCTGC 58.885 45.833 0.00 0.00 0.00 4.26
786 796 5.115480 GCCTCCTTCTAACAAATCTCTCTG 58.885 45.833 0.00 0.00 0.00 3.35
787 797 4.163268 GGCCTCCTTCTAACAAATCTCTCT 59.837 45.833 0.00 0.00 0.00 3.10
788 798 4.447290 GGCCTCCTTCTAACAAATCTCTC 58.553 47.826 0.00 0.00 0.00 3.20
789 799 3.201045 GGGCCTCCTTCTAACAAATCTCT 59.799 47.826 0.84 0.00 0.00 3.10
790 800 3.546724 GGGCCTCCTTCTAACAAATCTC 58.453 50.000 0.84 0.00 0.00 2.75
791 801 2.242452 GGGGCCTCCTTCTAACAAATCT 59.758 50.000 0.84 0.00 0.00 2.40
792 802 2.656002 GGGGCCTCCTTCTAACAAATC 58.344 52.381 0.84 0.00 0.00 2.17
793 803 1.064685 CGGGGCCTCCTTCTAACAAAT 60.065 52.381 0.84 0.00 0.00 2.32
794 804 0.326927 CGGGGCCTCCTTCTAACAAA 59.673 55.000 0.84 0.00 0.00 2.83
795 805 0.838987 ACGGGGCCTCCTTCTAACAA 60.839 55.000 0.84 0.00 0.00 2.83
796 806 0.041535 TACGGGGCCTCCTTCTAACA 59.958 55.000 0.84 0.00 0.00 2.41
797 807 1.197812 TTACGGGGCCTCCTTCTAAC 58.802 55.000 0.84 0.00 0.00 2.34
798 808 1.955451 TTTACGGGGCCTCCTTCTAA 58.045 50.000 0.84 0.00 0.00 2.10
799 809 1.556451 GTTTTACGGGGCCTCCTTCTA 59.444 52.381 0.84 0.00 0.00 2.10
800 810 0.327259 GTTTTACGGGGCCTCCTTCT 59.673 55.000 0.84 0.00 0.00 2.85
801 811 0.037160 TGTTTTACGGGGCCTCCTTC 59.963 55.000 0.84 0.00 0.00 3.46
802 812 0.251033 GTGTTTTACGGGGCCTCCTT 60.251 55.000 0.84 0.00 0.00 3.36
803 813 1.377612 GTGTTTTACGGGGCCTCCT 59.622 57.895 0.84 0.00 0.00 3.69
804 814 1.676635 GGTGTTTTACGGGGCCTCC 60.677 63.158 0.84 0.51 0.00 4.30
805 815 1.676635 GGGTGTTTTACGGGGCCTC 60.677 63.158 0.84 0.00 0.00 4.70
806 816 2.437449 GGGTGTTTTACGGGGCCT 59.563 61.111 0.84 0.00 0.00 5.19
807 817 3.057548 CGGGTGTTTTACGGGGCC 61.058 66.667 0.00 0.00 0.00 5.80
808 818 2.281692 ACGGGTGTTTTACGGGGC 60.282 61.111 0.00 0.00 0.00 5.80
809 819 0.321830 ATCACGGGTGTTTTACGGGG 60.322 55.000 0.00 0.00 0.00 5.73
810 820 1.465777 GAATCACGGGTGTTTTACGGG 59.534 52.381 0.00 0.00 0.00 5.28
811 821 2.414138 GAGAATCACGGGTGTTTTACGG 59.586 50.000 0.00 0.00 33.17 4.02
812 822 2.414138 GGAGAATCACGGGTGTTTTACG 59.586 50.000 0.00 0.00 36.25 3.18
813 823 2.414138 CGGAGAATCACGGGTGTTTTAC 59.586 50.000 0.00 0.00 36.25 2.01
814 824 2.037511 ACGGAGAATCACGGGTGTTTTA 59.962 45.455 0.00 0.00 36.25 1.52
815 825 1.202722 ACGGAGAATCACGGGTGTTTT 60.203 47.619 0.00 0.00 36.25 2.43
816 826 0.395312 ACGGAGAATCACGGGTGTTT 59.605 50.000 0.00 0.00 36.25 2.83
817 827 0.320421 CACGGAGAATCACGGGTGTT 60.320 55.000 0.00 0.00 36.25 3.32
818 828 1.292223 CACGGAGAATCACGGGTGT 59.708 57.895 0.00 0.00 36.25 4.16
819 829 1.447838 CCACGGAGAATCACGGGTG 60.448 63.158 2.79 0.00 36.25 4.61
820 830 1.885163 GACCACGGAGAATCACGGGT 61.885 60.000 9.04 9.04 36.20 5.28
821 831 1.153628 GACCACGGAGAATCACGGG 60.154 63.158 2.79 0.00 36.25 5.28
822 832 1.100510 TAGACCACGGAGAATCACGG 58.899 55.000 2.79 0.00 36.25 4.94
823 833 1.471287 TGTAGACCACGGAGAATCACG 59.529 52.381 0.00 0.00 36.25 4.35
824 834 3.587797 TTGTAGACCACGGAGAATCAC 57.412 47.619 0.00 0.00 36.25 3.06
825 835 4.610605 TTTTGTAGACCACGGAGAATCA 57.389 40.909 0.00 0.00 36.25 2.57
826 836 5.673818 GCATTTTTGTAGACCACGGAGAATC 60.674 44.000 0.00 0.00 0.00 2.52
827 837 4.156008 GCATTTTTGTAGACCACGGAGAAT 59.844 41.667 0.00 0.00 0.00 2.40
828 838 3.500680 GCATTTTTGTAGACCACGGAGAA 59.499 43.478 0.00 0.00 0.00 2.87
829 839 3.071479 GCATTTTTGTAGACCACGGAGA 58.929 45.455 0.00 0.00 0.00 3.71
830 840 3.074412 AGCATTTTTGTAGACCACGGAG 58.926 45.455 0.00 0.00 0.00 4.63
831 841 3.134574 AGCATTTTTGTAGACCACGGA 57.865 42.857 0.00 0.00 0.00 4.69
832 842 5.151389 GTTTAGCATTTTTGTAGACCACGG 58.849 41.667 0.00 0.00 0.00 4.94
833 843 5.151389 GGTTTAGCATTTTTGTAGACCACG 58.849 41.667 0.00 0.00 0.00 4.94
834 844 5.010213 TGGGTTTAGCATTTTTGTAGACCAC 59.990 40.000 0.00 0.00 0.00 4.16
835 845 5.141182 TGGGTTTAGCATTTTTGTAGACCA 58.859 37.500 0.00 0.00 0.00 4.02
836 846 5.336451 CCTGGGTTTAGCATTTTTGTAGACC 60.336 44.000 0.00 0.00 0.00 3.85
837 847 5.709966 CCTGGGTTTAGCATTTTTGTAGAC 58.290 41.667 0.00 0.00 0.00 2.59
838 848 4.219725 GCCTGGGTTTAGCATTTTTGTAGA 59.780 41.667 0.00 0.00 0.00 2.59
839 849 4.021544 TGCCTGGGTTTAGCATTTTTGTAG 60.022 41.667 0.00 0.00 0.00 2.74
840 850 3.898123 TGCCTGGGTTTAGCATTTTTGTA 59.102 39.130 0.00 0.00 0.00 2.41
841 851 2.703007 TGCCTGGGTTTAGCATTTTTGT 59.297 40.909 0.00 0.00 0.00 2.83
868 878 5.733620 AGTCCGTAAGATCAACCTGTAAA 57.266 39.130 0.00 0.00 43.02 2.01
894 904 1.814169 GGGAATCACGGCGGAGTTC 60.814 63.158 13.24 11.55 0.00 3.01
923 933 2.186125 GGAGGTCGGGTTTAGCCG 59.814 66.667 13.83 13.83 38.44 5.52
933 943 2.125350 GCTTGCAGGAGGAGGTCG 60.125 66.667 0.00 0.00 0.00 4.79
939 949 1.817099 GATCGTGGCTTGCAGGAGG 60.817 63.158 0.00 0.00 0.00 4.30
1101 1120 2.257371 GCCTGAGCGTACGTGTCA 59.743 61.111 17.90 17.84 0.00 3.58
1254 1273 2.595463 GTCTTGCTGTGGCTGGCA 60.595 61.111 0.00 0.00 39.59 4.92
1350 1369 4.475135 GAGAAGAGGCGCACCCCC 62.475 72.222 10.83 0.00 36.11 5.40
1520 1539 2.133742 CTCAGGTTTTGGCGTGGCAG 62.134 60.000 0.00 0.00 0.00 4.85
1771 1805 0.391130 GTGCCGCTGTAGATGAACCA 60.391 55.000 0.00 0.00 0.00 3.67
1772 1806 1.421410 CGTGCCGCTGTAGATGAACC 61.421 60.000 0.00 0.00 0.00 3.62
1957 1994 2.750350 CCTCAGTTCGGGGCAACT 59.250 61.111 0.00 0.00 37.05 3.16
1991 2028 3.366052 AGTTGCCGGGAAAAGATATGT 57.634 42.857 11.08 0.00 0.00 2.29
2156 2194 9.442047 GTGGAGCAGCTGATAAAGTTTATATAT 57.558 33.333 20.43 0.00 0.00 0.86
2236 2279 3.492102 ATTACATGGGAGGAACATCCG 57.508 47.619 0.00 0.00 42.75 4.18
2308 2352 5.710099 AGGTACAACATGTGTTCTATTTGGG 59.290 40.000 0.00 0.00 41.98 4.12
2314 2358 5.818678 AGGAAGGTACAACATGTGTTCTA 57.181 39.130 0.00 0.00 41.98 2.10
2333 2377 9.936759 GACAATAATGGGTTTCAAAAATTAGGA 57.063 29.630 0.00 0.00 0.00 2.94
2360 2404 6.153067 TGGCGTTCAACAAAAATACTAATGG 58.847 36.000 0.00 0.00 0.00 3.16
2367 2411 2.288518 GGGCTGGCGTTCAACAAAAATA 60.289 45.455 0.00 0.00 0.00 1.40
2371 2415 1.112315 ATGGGCTGGCGTTCAACAAA 61.112 50.000 0.00 0.00 0.00 2.83
2372 2416 0.250945 TATGGGCTGGCGTTCAACAA 60.251 50.000 0.00 0.00 0.00 2.83
2373 2417 0.250945 TTATGGGCTGGCGTTCAACA 60.251 50.000 0.00 0.00 0.00 3.33
2374 2418 0.885196 TTTATGGGCTGGCGTTCAAC 59.115 50.000 0.00 0.00 0.00 3.18
2375 2419 1.173043 CTTTATGGGCTGGCGTTCAA 58.827 50.000 0.00 0.00 0.00 2.69
2376 2420 0.326595 TCTTTATGGGCTGGCGTTCA 59.673 50.000 0.00 0.00 0.00 3.18
2377 2421 1.017387 CTCTTTATGGGCTGGCGTTC 58.983 55.000 0.00 0.00 0.00 3.95
2378 2422 1.032114 GCTCTTTATGGGCTGGCGTT 61.032 55.000 0.00 0.00 0.00 4.84
2379 2423 1.452108 GCTCTTTATGGGCTGGCGT 60.452 57.895 0.00 0.00 0.00 5.68
2380 2424 2.537560 CGCTCTTTATGGGCTGGCG 61.538 63.158 0.00 0.00 35.54 5.69
2381 2425 1.153168 TCGCTCTTTATGGGCTGGC 60.153 57.895 0.00 0.00 0.00 4.85
2382 2426 0.179000 ACTCGCTCTTTATGGGCTGG 59.821 55.000 0.00 0.00 0.00 4.85
2383 2427 2.546795 CCTACTCGCTCTTTATGGGCTG 60.547 54.545 0.00 0.00 0.00 4.85
2384 2428 1.689273 CCTACTCGCTCTTTATGGGCT 59.311 52.381 0.00 0.00 0.00 5.19
2385 2429 1.270358 CCCTACTCGCTCTTTATGGGC 60.270 57.143 0.00 0.00 0.00 5.36
2386 2430 1.270358 GCCCTACTCGCTCTTTATGGG 60.270 57.143 0.00 0.00 36.63 4.00
2387 2431 1.689273 AGCCCTACTCGCTCTTTATGG 59.311 52.381 0.00 0.00 0.00 2.74
2398 2442 1.480954 TCGGTCAATTGAGCCCTACTC 59.519 52.381 27.21 6.04 46.45 2.59
2399 2443 1.482593 CTCGGTCAATTGAGCCCTACT 59.517 52.381 27.21 0.00 39.23 2.57
2400 2444 1.941325 CTCGGTCAATTGAGCCCTAC 58.059 55.000 27.21 7.96 39.23 3.18
2406 2450 1.391485 CGTTCAGCTCGGTCAATTGAG 59.609 52.381 8.80 0.00 35.30 3.02
2407 2451 1.000394 TCGTTCAGCTCGGTCAATTGA 60.000 47.619 3.38 3.38 0.00 2.57
2408 2452 1.428448 TCGTTCAGCTCGGTCAATTG 58.572 50.000 0.00 0.00 0.00 2.32
2409 2453 2.069273 CTTCGTTCAGCTCGGTCAATT 58.931 47.619 0.00 0.00 0.00 2.32
2410 2454 1.000955 ACTTCGTTCAGCTCGGTCAAT 59.999 47.619 0.00 0.00 0.00 2.57
2411 2455 0.387929 ACTTCGTTCAGCTCGGTCAA 59.612 50.000 0.00 0.00 0.00 3.18
2412 2456 0.039437 GACTTCGTTCAGCTCGGTCA 60.039 55.000 0.00 0.00 0.00 4.02
2413 2457 0.241481 AGACTTCGTTCAGCTCGGTC 59.759 55.000 0.00 0.00 0.00 4.79
2414 2458 0.241481 GAGACTTCGTTCAGCTCGGT 59.759 55.000 0.00 0.00 0.00 4.69
2415 2459 0.241213 TGAGACTTCGTTCAGCTCGG 59.759 55.000 0.00 0.00 0.00 4.63
2416 2460 1.068885 ACTGAGACTTCGTTCAGCTCG 60.069 52.381 1.66 0.00 43.59 5.03
2417 2461 2.715737 ACTGAGACTTCGTTCAGCTC 57.284 50.000 1.66 0.00 43.59 4.09
2418 2462 2.748605 CAACTGAGACTTCGTTCAGCT 58.251 47.619 1.66 0.00 43.59 4.24
2419 2463 1.193426 GCAACTGAGACTTCGTTCAGC 59.807 52.381 1.66 0.00 43.59 4.26
2420 2464 2.473816 TGCAACTGAGACTTCGTTCAG 58.526 47.619 0.27 0.27 44.93 3.02
2421 2465 2.473816 CTGCAACTGAGACTTCGTTCA 58.526 47.619 0.00 0.00 0.00 3.18
2422 2466 1.795286 CCTGCAACTGAGACTTCGTTC 59.205 52.381 0.00 0.00 0.00 3.95
2423 2467 1.412710 TCCTGCAACTGAGACTTCGTT 59.587 47.619 0.00 0.00 0.00 3.85
2424 2468 1.040646 TCCTGCAACTGAGACTTCGT 58.959 50.000 0.00 0.00 0.00 3.85
2425 2469 1.423395 GTCCTGCAACTGAGACTTCG 58.577 55.000 0.00 0.00 0.00 3.79
2426 2470 1.269831 ACGTCCTGCAACTGAGACTTC 60.270 52.381 0.00 0.00 0.00 3.01
2427 2471 0.753262 ACGTCCTGCAACTGAGACTT 59.247 50.000 0.00 0.00 0.00 3.01
2428 2472 0.753262 AACGTCCTGCAACTGAGACT 59.247 50.000 0.00 0.00 0.00 3.24
2429 2473 2.059541 GTAACGTCCTGCAACTGAGAC 58.940 52.381 0.00 0.00 0.00 3.36
2430 2474 1.000506 GGTAACGTCCTGCAACTGAGA 59.999 52.381 0.00 0.00 0.00 3.27
2431 2475 1.000955 AGGTAACGTCCTGCAACTGAG 59.999 52.381 0.00 0.00 46.39 3.35
2432 2476 1.045407 AGGTAACGTCCTGCAACTGA 58.955 50.000 0.00 0.00 46.39 3.41
2433 2477 2.736144 TAGGTAACGTCCTGCAACTG 57.264 50.000 6.07 0.00 46.39 3.16
2434 2478 3.975168 AATAGGTAACGTCCTGCAACT 57.025 42.857 6.07 0.00 46.39 3.16
2435 2479 5.409214 TGTAAAATAGGTAACGTCCTGCAAC 59.591 40.000 6.07 0.00 46.39 4.17
2436 2480 5.549347 TGTAAAATAGGTAACGTCCTGCAA 58.451 37.500 6.07 0.00 46.39 4.08
2437 2481 5.149973 TGTAAAATAGGTAACGTCCTGCA 57.850 39.130 6.07 0.00 46.39 4.41
2438 2482 6.673154 AATGTAAAATAGGTAACGTCCTGC 57.327 37.500 6.07 0.00 46.39 4.85
2441 2485 9.773328 GGTTTTAATGTAAAATAGGTAACGTCC 57.227 33.333 0.00 0.00 39.95 4.79
2442 2486 9.773328 GGGTTTTAATGTAAAATAGGTAACGTC 57.227 33.333 0.00 0.00 39.95 4.34
2443 2487 8.739039 GGGGTTTTAATGTAAAATAGGTAACGT 58.261 33.333 0.00 0.00 39.95 3.99
2444 2488 8.959548 AGGGGTTTTAATGTAAAATAGGTAACG 58.040 33.333 0.00 0.00 39.95 3.18
2453 2497 8.623030 GCGTCATATAGGGGTTTTAATGTAAAA 58.377 33.333 0.00 0.00 35.45 1.52
2454 2498 7.774157 TGCGTCATATAGGGGTTTTAATGTAAA 59.226 33.333 0.00 0.00 0.00 2.01
2455 2499 7.281098 TGCGTCATATAGGGGTTTTAATGTAA 58.719 34.615 0.00 0.00 0.00 2.41
2456 2500 6.828788 TGCGTCATATAGGGGTTTTAATGTA 58.171 36.000 0.00 0.00 0.00 2.29
2457 2501 5.686753 TGCGTCATATAGGGGTTTTAATGT 58.313 37.500 0.00 0.00 0.00 2.71
2458 2502 6.817765 ATGCGTCATATAGGGGTTTTAATG 57.182 37.500 0.00 0.00 0.00 1.90
2459 2503 7.833285 AAATGCGTCATATAGGGGTTTTAAT 57.167 32.000 0.00 0.00 0.00 1.40
2460 2504 7.484975 CAAAATGCGTCATATAGGGGTTTTAA 58.515 34.615 0.00 0.00 0.00 1.52
2461 2505 6.460399 GCAAAATGCGTCATATAGGGGTTTTA 60.460 38.462 0.00 0.00 31.71 1.52
2462 2506 5.681179 GCAAAATGCGTCATATAGGGGTTTT 60.681 40.000 0.00 0.00 31.71 2.43
2463 2507 4.202111 GCAAAATGCGTCATATAGGGGTTT 60.202 41.667 0.00 0.00 31.71 3.27
2464 2508 3.317993 GCAAAATGCGTCATATAGGGGTT 59.682 43.478 0.00 0.00 31.71 4.11
2465 2509 2.884639 GCAAAATGCGTCATATAGGGGT 59.115 45.455 0.00 0.00 31.71 4.95
2466 2510 3.559238 GCAAAATGCGTCATATAGGGG 57.441 47.619 0.00 0.00 31.71 4.79
2478 2522 2.696521 CGACGTGCGTGCAAAATGC 61.697 57.895 0.67 0.00 45.29 3.56
2479 2523 2.074353 CCGACGTGCGTGCAAAATG 61.074 57.895 0.67 0.00 38.67 2.32
2480 2524 2.251075 CCGACGTGCGTGCAAAAT 59.749 55.556 0.67 0.00 38.67 1.82
2481 2525 4.599434 GCCGACGTGCGTGCAAAA 62.599 61.111 0.67 0.00 38.67 2.44
2490 2534 4.794439 TGCTCGATGGCCGACGTG 62.794 66.667 18.18 16.80 43.23 4.49
2491 2535 2.852495 AATTGCTCGATGGCCGACGT 62.852 55.000 18.18 0.00 43.23 4.34
2492 2536 0.874175 TAATTGCTCGATGGCCGACG 60.874 55.000 13.90 13.90 43.23 5.12
2493 2537 0.861837 CTAATTGCTCGATGGCCGAC 59.138 55.000 0.00 0.00 43.23 4.79
2494 2538 0.880278 GCTAATTGCTCGATGGCCGA 60.880 55.000 0.00 0.00 46.35 5.54
2495 2539 1.571460 GCTAATTGCTCGATGGCCG 59.429 57.895 0.00 0.00 38.95 6.13
2514 2558 2.682846 CCATAACTGGCTGGCCCA 59.317 61.111 9.28 0.00 42.79 5.36
2532 2576 1.067635 CAAAACCGGGATTGCTGGAAG 60.068 52.381 10.40 0.00 0.00 3.46
2533 2577 0.965439 CAAAACCGGGATTGCTGGAA 59.035 50.000 10.40 0.00 0.00 3.53
2534 2578 0.897863 CCAAAACCGGGATTGCTGGA 60.898 55.000 10.40 0.00 0.00 3.86
2535 2579 1.591183 CCAAAACCGGGATTGCTGG 59.409 57.895 6.32 0.74 0.00 4.85
2541 2585 9.698201 CTTCTAGAAGATTCCCAAAACCGGGAT 62.698 44.444 25.55 0.00 46.62 3.85
2542 2586 8.487249 CTTCTAGAAGATTCCCAAAACCGGGA 62.487 46.154 25.55 0.00 46.17 5.14
2543 2587 6.376209 CTTCTAGAAGATTCCCAAAACCGGG 61.376 48.000 25.55 0.00 43.29 5.73
2544 2588 4.216411 TCTAGAAGATTCCCAAAACCGG 57.784 45.455 0.00 0.00 0.00 5.28
2545 2589 4.636206 CCTTCTAGAAGATTCCCAAAACCG 59.364 45.833 30.17 7.90 40.79 4.44
2546 2590 5.571285 ACCTTCTAGAAGATTCCCAAAACC 58.429 41.667 30.17 0.00 40.79 3.27
2547 2591 7.526142 AAACCTTCTAGAAGATTCCCAAAAC 57.474 36.000 30.17 0.00 40.79 2.43
2548 2592 7.782644 TGAAAACCTTCTAGAAGATTCCCAAAA 59.217 33.333 30.17 13.38 40.79 2.44
2549 2593 7.294584 TGAAAACCTTCTAGAAGATTCCCAAA 58.705 34.615 30.17 13.66 40.79 3.28
2550 2594 6.848069 TGAAAACCTTCTAGAAGATTCCCAA 58.152 36.000 30.17 13.93 40.79 4.12
2551 2595 6.448369 TGAAAACCTTCTAGAAGATTCCCA 57.552 37.500 30.17 18.54 40.79 4.37
2552 2596 6.127869 GCTTGAAAACCTTCTAGAAGATTCCC 60.128 42.308 30.17 16.47 40.79 3.97
2553 2597 6.657117 AGCTTGAAAACCTTCTAGAAGATTCC 59.343 38.462 30.17 16.78 40.79 3.01
2554 2598 7.361628 CCAGCTTGAAAACCTTCTAGAAGATTC 60.362 40.741 30.17 26.47 40.79 2.52
2555 2599 6.432472 CCAGCTTGAAAACCTTCTAGAAGATT 59.568 38.462 30.17 19.60 40.79 2.40
2556 2600 5.942826 CCAGCTTGAAAACCTTCTAGAAGAT 59.057 40.000 30.17 14.20 40.79 2.40
2557 2601 5.163195 ACCAGCTTGAAAACCTTCTAGAAGA 60.163 40.000 30.17 9.39 40.79 2.87
2558 2602 5.066593 ACCAGCTTGAAAACCTTCTAGAAG 58.933 41.667 23.31 23.31 36.77 2.85
2559 2603 5.048846 ACCAGCTTGAAAACCTTCTAGAA 57.951 39.130 4.81 4.81 36.77 2.10
2560 2604 4.706842 ACCAGCTTGAAAACCTTCTAGA 57.293 40.909 0.00 0.00 36.77 2.43
2561 2605 5.774498 AAACCAGCTTGAAAACCTTCTAG 57.226 39.130 0.00 0.00 37.44 2.43
2562 2606 6.538945 AAAAACCAGCTTGAAAACCTTCTA 57.461 33.333 0.00 0.00 32.33 2.10
2563 2607 5.420725 AAAAACCAGCTTGAAAACCTTCT 57.579 34.783 0.00 0.00 32.33 2.85
2564 2608 5.522460 GGTAAAAACCAGCTTGAAAACCTTC 59.478 40.000 0.00 0.00 0.00 3.46
2565 2609 5.424757 GGTAAAAACCAGCTTGAAAACCTT 58.575 37.500 0.00 0.00 0.00 3.50
2566 2610 4.141801 GGGTAAAAACCAGCTTGAAAACCT 60.142 41.667 0.00 0.00 0.00 3.50
2567 2611 4.124238 GGGTAAAAACCAGCTTGAAAACC 58.876 43.478 0.00 0.00 0.00 3.27
2568 2612 5.018539 AGGGTAAAAACCAGCTTGAAAAC 57.981 39.130 0.00 0.00 0.00 2.43
2569 2613 5.685520 AAGGGTAAAAACCAGCTTGAAAA 57.314 34.783 0.00 0.00 0.00 2.29
2570 2614 5.685520 AAAGGGTAAAAACCAGCTTGAAA 57.314 34.783 0.00 0.00 0.00 2.69
2571 2615 5.666462 GAAAAGGGTAAAAACCAGCTTGAA 58.334 37.500 0.00 0.00 0.00 2.69
2572 2616 4.202070 CGAAAAGGGTAAAAACCAGCTTGA 60.202 41.667 0.00 0.00 0.00 3.02
2573 2617 4.048504 CGAAAAGGGTAAAAACCAGCTTG 58.951 43.478 0.00 0.00 0.00 4.01
2574 2618 3.069016 CCGAAAAGGGTAAAAACCAGCTT 59.931 43.478 0.00 0.00 35.97 3.74
2575 2619 2.626266 CCGAAAAGGGTAAAAACCAGCT 59.374 45.455 0.00 0.00 35.97 4.24
2576 2620 3.021269 CCGAAAAGGGTAAAAACCAGC 57.979 47.619 0.00 0.00 35.97 4.85
2588 2632 4.095334 CCGTATAAAAGGTTCCCGAAAAGG 59.905 45.833 0.00 0.00 40.63 3.11
2589 2633 4.696877 ACCGTATAAAAGGTTCCCGAAAAG 59.303 41.667 0.00 0.00 37.49 2.27
2590 2634 4.650734 ACCGTATAAAAGGTTCCCGAAAA 58.349 39.130 0.00 0.00 37.49 2.29
2591 2635 4.284829 ACCGTATAAAAGGTTCCCGAAA 57.715 40.909 0.00 0.00 37.49 3.46
2592 2636 3.979101 ACCGTATAAAAGGTTCCCGAA 57.021 42.857 0.00 0.00 37.49 4.30
2593 2637 3.979101 AACCGTATAAAAGGTTCCCGA 57.021 42.857 3.48 0.00 46.87 5.14
2611 2655 1.077169 AGGGGGAAATGGTTCAGGAAC 59.923 52.381 3.58 3.58 40.45 3.62
2612 2656 1.466858 AGGGGGAAATGGTTCAGGAA 58.533 50.000 0.00 0.00 35.25 3.36
2613 2657 1.466858 AAGGGGGAAATGGTTCAGGA 58.533 50.000 0.00 0.00 35.25 3.86
2614 2658 2.325661 AAAGGGGGAAATGGTTCAGG 57.674 50.000 0.00 0.00 35.25 3.86
2615 2659 4.220602 CAGTAAAAGGGGGAAATGGTTCAG 59.779 45.833 0.00 0.00 35.25 3.02
2616 2660 4.156477 CAGTAAAAGGGGGAAATGGTTCA 58.844 43.478 0.00 0.00 35.25 3.18
2617 2661 3.513912 CCAGTAAAAGGGGGAAATGGTTC 59.486 47.826 0.00 0.00 0.00 3.62
2618 2662 3.116512 ACCAGTAAAAGGGGGAAATGGTT 60.117 43.478 0.00 0.00 36.41 3.67
2619 2663 2.453212 ACCAGTAAAAGGGGGAAATGGT 59.547 45.455 0.00 0.00 35.03 3.55
2620 2664 3.184382 ACCAGTAAAAGGGGGAAATGG 57.816 47.619 0.00 0.00 0.00 3.16
2621 2665 5.560722 AAAACCAGTAAAAGGGGGAAATG 57.439 39.130 0.00 0.00 0.00 2.32
2622 2666 7.037873 GGATAAAAACCAGTAAAAGGGGGAAAT 60.038 37.037 0.00 0.00 0.00 2.17
2623 2667 6.270463 GGATAAAAACCAGTAAAAGGGGGAAA 59.730 38.462 0.00 0.00 0.00 3.13
2624 2668 5.781306 GGATAAAAACCAGTAAAAGGGGGAA 59.219 40.000 0.00 0.00 0.00 3.97
2625 2669 5.335261 GGATAAAAACCAGTAAAAGGGGGA 58.665 41.667 0.00 0.00 0.00 4.81
2626 2670 4.468510 GGGATAAAAACCAGTAAAAGGGGG 59.531 45.833 0.00 0.00 0.00 5.40
2627 2671 4.468510 GGGGATAAAAACCAGTAAAAGGGG 59.531 45.833 0.00 0.00 0.00 4.79
2628 2672 5.338632 AGGGGATAAAAACCAGTAAAAGGG 58.661 41.667 0.00 0.00 0.00 3.95
2629 2673 6.014012 TGAGGGGATAAAAACCAGTAAAAGG 58.986 40.000 0.00 0.00 0.00 3.11
2630 2674 7.718334 ATGAGGGGATAAAAACCAGTAAAAG 57.282 36.000 0.00 0.00 0.00 2.27
2631 2675 8.499288 AAATGAGGGGATAAAAACCAGTAAAA 57.501 30.769 0.00 0.00 0.00 1.52
2632 2676 9.777008 ATAAATGAGGGGATAAAAACCAGTAAA 57.223 29.630 0.00 0.00 0.00 2.01
2633 2677 9.777008 AATAAATGAGGGGATAAAAACCAGTAA 57.223 29.630 0.00 0.00 0.00 2.24
2634 2678 9.777008 AAATAAATGAGGGGATAAAAACCAGTA 57.223 29.630 0.00 0.00 0.00 2.74
2635 2679 8.539544 CAAATAAATGAGGGGATAAAAACCAGT 58.460 33.333 0.00 0.00 0.00 4.00
2636 2680 8.539544 ACAAATAAATGAGGGGATAAAAACCAG 58.460 33.333 0.00 0.00 0.00 4.00
2637 2681 8.442660 ACAAATAAATGAGGGGATAAAAACCA 57.557 30.769 0.00 0.00 0.00 3.67
2638 2682 9.733556 AAACAAATAAATGAGGGGATAAAAACC 57.266 29.630 0.00 0.00 0.00 3.27
2645 2689 9.283768 GAAAACAAAACAAATAAATGAGGGGAT 57.716 29.630 0.00 0.00 0.00 3.85
2646 2690 8.490311 AGAAAACAAAACAAATAAATGAGGGGA 58.510 29.630 0.00 0.00 0.00 4.81
2647 2691 8.675705 AGAAAACAAAACAAATAAATGAGGGG 57.324 30.769 0.00 0.00 0.00 4.79
2648 2692 9.546428 AGAGAAAACAAAACAAATAAATGAGGG 57.454 29.630 0.00 0.00 0.00 4.30
2734 2778 9.750125 GAACAAGTCTTAAATTCTGGATTGTTT 57.250 29.630 0.00 0.00 38.17 2.83
2735 2779 8.912988 TGAACAAGTCTTAAATTCTGGATTGTT 58.087 29.630 0.00 0.00 40.08 2.83
2736 2780 8.463930 TGAACAAGTCTTAAATTCTGGATTGT 57.536 30.769 0.00 0.00 0.00 2.71
2737 2781 8.786898 TCTGAACAAGTCTTAAATTCTGGATTG 58.213 33.333 8.90 0.00 0.00 2.67
2738 2782 8.924511 TCTGAACAAGTCTTAAATTCTGGATT 57.075 30.769 8.90 0.00 0.00 3.01
2739 2783 8.787852 GTTCTGAACAAGTCTTAAATTCTGGAT 58.212 33.333 15.34 0.00 0.00 3.41
2740 2784 7.993183 AGTTCTGAACAAGTCTTAAATTCTGGA 59.007 33.333 21.50 1.54 0.00 3.86
2741 2785 8.159344 AGTTCTGAACAAGTCTTAAATTCTGG 57.841 34.615 21.50 0.00 0.00 3.86
2790 2834 9.320352 ACAGTTTTTAAAAGACAACAACACTTT 57.680 25.926 0.14 0.00 35.74 2.66
2791 2835 8.880878 ACAGTTTTTAAAAGACAACAACACTT 57.119 26.923 0.14 0.00 0.00 3.16
2792 2836 8.880878 AACAGTTTTTAAAAGACAACAACACT 57.119 26.923 0.14 0.00 0.00 3.55
2793 2837 7.942538 CGAACAGTTTTTAAAAGACAACAACAC 59.057 33.333 0.14 0.00 0.00 3.32
2794 2838 7.358517 GCGAACAGTTTTTAAAAGACAACAACA 60.359 33.333 0.14 0.00 0.00 3.33
2795 2839 6.946037 GCGAACAGTTTTTAAAAGACAACAAC 59.054 34.615 0.14 0.00 0.00 3.32
2796 2840 6.641314 TGCGAACAGTTTTTAAAAGACAACAA 59.359 30.769 0.14 0.00 0.00 2.83
2797 2841 6.150318 TGCGAACAGTTTTTAAAAGACAACA 58.850 32.000 0.14 0.00 0.00 3.33
2798 2842 6.620253 TGCGAACAGTTTTTAAAAGACAAC 57.380 33.333 0.14 0.00 0.00 3.32
2799 2843 7.820044 AATGCGAACAGTTTTTAAAAGACAA 57.180 28.000 0.14 0.00 0.00 3.18
2800 2844 7.820044 AAATGCGAACAGTTTTTAAAAGACA 57.180 28.000 0.14 0.00 27.36 3.41
2801 2845 7.634432 CCAAAATGCGAACAGTTTTTAAAAGAC 59.366 33.333 0.14 3.48 41.00 3.01
2802 2846 7.545965 TCCAAAATGCGAACAGTTTTTAAAAGA 59.454 29.630 0.14 0.00 41.00 2.52
2803 2847 7.680062 TCCAAAATGCGAACAGTTTTTAAAAG 58.320 30.769 0.14 0.00 41.00 2.27
2804 2848 7.596749 TCCAAAATGCGAACAGTTTTTAAAA 57.403 28.000 0.00 0.00 41.00 1.52
2805 2849 7.596749 TTCCAAAATGCGAACAGTTTTTAAA 57.403 28.000 0.00 0.00 41.00 1.52
2806 2850 7.596749 TTTCCAAAATGCGAACAGTTTTTAA 57.403 28.000 0.00 0.00 41.00 1.52
2807 2851 7.596749 TTTTCCAAAATGCGAACAGTTTTTA 57.403 28.000 0.00 0.00 41.00 1.52
2808 2852 6.487689 TTTTCCAAAATGCGAACAGTTTTT 57.512 29.167 0.00 0.00 41.00 1.94
2809 2853 6.487689 TTTTTCCAAAATGCGAACAGTTTT 57.512 29.167 0.00 0.00 41.00 2.43
2848 2892 7.173907 TGTGAGCACTTTTGAAATTTCCAAAAA 59.826 29.630 15.48 14.01 41.28 1.94
2849 2893 6.652481 TGTGAGCACTTTTGAAATTTCCAAAA 59.348 30.769 15.48 17.57 40.09 2.44
2850 2894 6.169094 TGTGAGCACTTTTGAAATTTCCAAA 58.831 32.000 15.48 15.02 0.00 3.28
2851 2895 5.728471 TGTGAGCACTTTTGAAATTTCCAA 58.272 33.333 15.48 8.13 0.00 3.53
2852 2896 5.336150 TGTGAGCACTTTTGAAATTTCCA 57.664 34.783 15.48 1.42 0.00 3.53
2853 2897 6.849588 AATGTGAGCACTTTTGAAATTTCC 57.150 33.333 15.48 0.00 0.00 3.13
2854 2898 9.213819 GAAAAATGTGAGCACTTTTGAAATTTC 57.786 29.630 11.41 11.41 38.27 2.17
2855 2899 8.728833 TGAAAAATGTGAGCACTTTTGAAATTT 58.271 25.926 13.13 0.00 38.27 1.82
2856 2900 8.266392 TGAAAAATGTGAGCACTTTTGAAATT 57.734 26.923 13.13 6.03 38.27 1.82
2857 2901 7.846644 TGAAAAATGTGAGCACTTTTGAAAT 57.153 28.000 13.13 3.68 38.27 2.17
2858 2902 7.664082 TTGAAAAATGTGAGCACTTTTGAAA 57.336 28.000 13.13 7.33 38.27 2.69
2859 2903 7.664082 TTTGAAAAATGTGAGCACTTTTGAA 57.336 28.000 13.13 5.84 38.27 2.69
2860 2904 7.664082 TTTTGAAAAATGTGAGCACTTTTGA 57.336 28.000 13.13 0.76 38.27 2.69
2861 2905 8.898983 ATTTTTGAAAAATGTGAGCACTTTTG 57.101 26.923 14.50 0.00 38.27 2.44
2862 2906 9.344309 CAATTTTTGAAAAATGTGAGCACTTTT 57.656 25.926 15.79 8.22 39.41 2.27
2863 2907 8.513774 ACAATTTTTGAAAAATGTGAGCACTTT 58.486 25.926 15.79 0.00 39.72 2.66
2864 2908 8.042944 ACAATTTTTGAAAAATGTGAGCACTT 57.957 26.923 15.79 0.00 39.72 3.16
2865 2909 7.614124 ACAATTTTTGAAAAATGTGAGCACT 57.386 28.000 15.79 0.00 39.72 4.40
2866 2910 7.429051 GGAACAATTTTTGAAAAATGTGAGCAC 59.571 33.333 15.79 5.51 40.16 4.40
2867 2911 7.414984 GGGAACAATTTTTGAAAAATGTGAGCA 60.415 33.333 15.79 0.00 40.16 4.26
2868 2912 6.912051 GGGAACAATTTTTGAAAAATGTGAGC 59.088 34.615 15.79 12.05 40.16 4.26
2869 2913 7.983307 TGGGAACAATTTTTGAAAAATGTGAG 58.017 30.769 15.79 9.39 40.16 3.51
2870 2914 7.609532 ACTGGGAACAATTTTTGAAAAATGTGA 59.390 29.630 15.79 0.00 40.16 3.58
2871 2915 7.760437 ACTGGGAACAATTTTTGAAAAATGTG 58.240 30.769 15.79 16.26 40.16 3.21
2872 2916 7.936496 ACTGGGAACAATTTTTGAAAAATGT 57.064 28.000 15.79 12.70 42.16 2.71
2879 2923 9.898152 AGAAATTAAACTGGGAACAATTTTTGA 57.102 25.926 0.00 0.00 36.10 2.69
2885 2929 9.898152 TGAAAAAGAAATTAAACTGGGAACAAT 57.102 25.926 0.00 0.00 42.06 2.71
2886 2930 9.898152 ATGAAAAAGAAATTAAACTGGGAACAA 57.102 25.926 0.00 0.00 42.06 2.83
2887 2931 9.323985 CATGAAAAAGAAATTAAACTGGGAACA 57.676 29.630 0.00 0.00 39.59 3.18
2888 2932 9.541143 TCATGAAAAAGAAATTAAACTGGGAAC 57.459 29.630 0.00 0.00 0.00 3.62
2923 2967 8.776470 CCTGAACAATTTAGAAAATGCAACATT 58.224 29.630 0.00 0.00 0.00 2.71
2924 2968 8.149647 TCCTGAACAATTTAGAAAATGCAACAT 58.850 29.630 0.00 0.00 0.00 2.71
2925 2969 7.495901 TCCTGAACAATTTAGAAAATGCAACA 58.504 30.769 0.00 0.00 0.00 3.33
2926 2970 7.945033 TCCTGAACAATTTAGAAAATGCAAC 57.055 32.000 0.00 0.00 0.00 4.17
2927 2971 9.558396 AATTCCTGAACAATTTAGAAAATGCAA 57.442 25.926 0.00 0.00 0.00 4.08
2928 2972 9.558396 AAATTCCTGAACAATTTAGAAAATGCA 57.442 25.926 0.00 0.00 32.74 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.