AutoCloner

Multiple sequence alignment - TraesCS2D01G121900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2D01G121900	chr2D	100.000	3229	0	0	1	3229	71202810	71206038	0.000000e+00	5963.0
1	TraesCS2D01G121900	chr2D	92.699	1082	49	12	1674	2745	71258386	71259447	0.000000e+00	1533.0
2	TraesCS2D01G121900	chr2D	92.421	1082	53	11	1674	2745	71384541	71385603	0.000000e+00	1517.0
3	TraesCS2D01G121900	chr2D	88.845	502	41	7	1187	1686	71257868	71258356	1.280000e-168	603.0
4	TraesCS2D01G121900	chr2D	86.905	504	48	8	1187	1686	71384027	71384516	1.690000e-152	549.0
5	TraesCS2D01G121900	chr2D	93.863	277	17	0	2950	3226	71387321	71387597	4.980000e-113	418.0
6	TraesCS2D01G121900	chr2D	82.773	238	30	8	2547	2775	70820256	70820021	5.460000e-48	202.0
7	TraesCS2D01G121900	chr2D	98.214	56	1	0	827	882	71203582	71203637	7.370000e-17	99.0
8	TraesCS2D01G121900	chr2D	98.214	56	1	0	773	828	71203636	71203691	7.370000e-17	99.0
9	TraesCS2D01G121900	chr2D	92.647	68	4	1	1071	1137	644097871	644097938	2.650000e-16	97.1
10	TraesCS2D01G121900	chr2D	100.000	29	0	0	990	1018	302645445	302645417	2.000000e-03	54.7
11	TraesCS2D01G121900	chr2D	96.970	33	0	1	987	1018	596985150	596985118	2.000000e-03	54.7
12	TraesCS2D01G121900	chr2B	95.916	2106	64	13	1135	3229	107525010	107527104	0.000000e+00	3393.0
13	TraesCS2D01G121900	chr2B	86.207	841	94	16	1604	2439	107499140	107499963	0.000000e+00	891.0
14	TraesCS2D01G121900	chr2B	81.472	788	121	13	1769	2544	107117864	107117090	9.840000e-175	623.0
15	TraesCS2D01G121900	chr2B	90.591	372	32	3	2440	2808	107500115	107500486	1.040000e-134	490.0
16	TraesCS2D01G121900	chr2B	82.353	238	31	8	2547	2775	107117131	107116896	2.540000e-46	196.0
17	TraesCS2D01G121900	chr2B	80.090	221	43	1	1198	1418	107118496	107118277	2.580000e-36	163.0
18	TraesCS2D01G121900	chr2B	88.235	68	4	4	1031	1094	702727775	702727708	9.600000e-11	78.7
19	TraesCS2D01G121900	chr2A	88.587	1288	105	16	1606	2860	70187064	70188342	0.000000e+00	1526.0
20	TraesCS2D01G121900	chr2A	82.826	460	66	10	266	719	25351046	25350594	1.800000e-107	399.0
21	TraesCS2D01G121900	chr2A	79.821	223	40	5	1198	1418	70183997	70183778	1.200000e-34	158.0
22	TraesCS2D01G121900	chr2A	97.297	37	1	0	220	256	3601112	3601148	2.690000e-06	63.9
23	TraesCS2D01G121900	chr1D	84.764	466	58	6	262	720	459832770	459833229	3.800000e-124	455.0
24	TraesCS2D01G121900	chr1D	84.862	436	57	8	265	692	103741203	103741637	6.400000e-117	431.0
25	TraesCS2D01G121900	chr1D	96.970	33	0	1	987	1018	141715537	141715505	2.000000e-03	54.7
26	TraesCS2D01G121900	chr3A	86.632	389	47	2	266	654	683683286	683683669	2.980000e-115	425.0
27	TraesCS2D01G121900	chr3A	82.646	461	67	10	265	719	580560165	580560618	2.330000e-106	396.0
28	TraesCS2D01G121900	chr5B	82.646	461	70	7	264	720	700230715	700230261	1.800000e-107	399.0
29	TraesCS2D01G121900	chr5B	82.646	461	66	11	266	719	72093166	72093619	2.330000e-106	396.0
30	TraesCS2D01G121900	chr5B	90.110	91	8	1	1048	1137	512982552	512982642	2.040000e-22	117.0
31	TraesCS2D01G121900	chr5B	84.615	91	13	1	1048	1137	272165936	272165846	4.440000e-14	89.8
32	TraesCS2D01G121900	chr5B	86.667	60	7	1	209	267	580438032	580437973	7.480000e-07	65.8
33	TraesCS2D01G121900	chr5B	96.970	33	1	0	990	1022	422627653	422627685	4.500000e-04	56.5
34	TraesCS2D01G121900	chr5B	96.970	33	1	0	217	249	604227426	604227458	4.500000e-04	56.5
35	TraesCS2D01G121900	chr4A	82.721	463	66	11	264	719	674355890	674355435	1.800000e-107	399.0
36	TraesCS2D01G121900	chr4A	96.875	32	1	0	987	1018	101660358	101660389	2.000000e-03	54.7
37	TraesCS2D01G121900	chr1B	82.441	467	68	11	265	725	277964997	277964539	2.330000e-106	396.0
38	TraesCS2D01G121900	chr1B	90.385	52	5	0	216	267	595341742	595341691	5.780000e-08	69.4
39	TraesCS2D01G121900	chr3D	92.308	91	6	1	1048	1137	560269807	560269717	9.400000e-26	128.0
40	TraesCS2D01G121900	chr3D	96.970	33	0	1	987	1018	143780629	143780661	2.000000e-03	54.7
41	TraesCS2D01G121900	chr3D	96.970	33	0	1	987	1018	304034013	304033981	2.000000e-03	54.7
42	TraesCS2D01G121900	chr7A	91.209	91	7	1	1048	1137	575439128	575439038	4.370000e-24	122.0
43	TraesCS2D01G121900	chr7A	91.837	49	4	0	215	263	183718750	183718798	5.780000e-08	69.4
44	TraesCS2D01G121900	chr7A	92.683	41	3	0	216	256	94702087	94702127	3.480000e-05	60.2
45	TraesCS2D01G121900	chr7D	87.356	87	11	0	1048	1134	629866778	629866864	2.050000e-17	100.0
46	TraesCS2D01G121900	chr6B	88.372	86	7	2	1051	1134	40646818	40646734	2.050000e-17	100.0
47	TraesCS2D01G121900	chr3B	90.411	73	7	0	1048	1120	7192804	7192876	2.650000e-16	97.1
48	TraesCS2D01G121900	chr3B	91.489	47	4	0	221	267	99121378	99121332	7.480000e-07	65.8
49	TraesCS2D01G121900	chr6A	84.783	92	12	2	1031	1120	59675451	59675542	1.230000e-14	91.6
50	TraesCS2D01G121900	chr6A	86.842	76	9	1	900	974	2867505	2867430	2.060000e-12	84.2
51	TraesCS2D01G121900	chr6A	88.235	51	6	0	213	263	199589301	199589251	9.670000e-06	62.1
52	TraesCS2D01G121900	chr6A	83.871	62	10	0	833	894	611657221	611657282	3.480000e-05	60.2
53	TraesCS2D01G121900	chr6D	86.957	69	8	1	827	894	34307633	34307565	3.450000e-10	76.8
54	TraesCS2D01G121900	chr5D	95.000	40	2	0	217	256	418625822	418625861	2.690000e-06	63.9
55	TraesCS2D01G121900	chr5D	96.970	33	0	1	987	1018	34052144	34052176	2.000000e-03	54.7
56	TraesCS2D01G121900	chr4B	96.970	33	0	1	987	1018	188754696	188754664	2.000000e-03	54.7

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2D01G121900	chr2D	71202810	71206038	3228	False	2053.666667	5963	98.809333	1	3229	3	chr2D.!!$F2	3228
1	TraesCS2D01G121900	chr2D	71257868	71259447	1579	False	1068.000000	1533	90.772000	1187	2745	2	chr2D.!!$F3	1558
2	TraesCS2D01G121900	chr2D	71384027	71387597	3570	False	828.000000	1517	91.063000	1187	3226	3	chr2D.!!$F4	2039
3	TraesCS2D01G121900	chr2B	107525010	107527104	2094	False	3393.000000	3393	95.916000	1135	3229	1	chr2B.!!$F1	2094
4	TraesCS2D01G121900	chr2B	107499140	107500486	1346	False	690.500000	891	88.399000	1604	2808	2	chr2B.!!$F2	1204
5	TraesCS2D01G121900	chr2B	107116896	107118496	1600	True	327.333333	623	81.305000	1198	2775	3	chr2B.!!$R2	1577
6	TraesCS2D01G121900	chr2A	70187064	70188342	1278	False	1526.000000	1526	88.587000	1606	2860	1	chr2A.!!$F2	1254

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	End Stability	Orientation
741	742	0.026285	CTACGCTAATTGTGCCACGC	59.974	55.0	0.00	5.34	F
779	780	0.027586	GCATGTTTACTAAGCGGGCG	59.972	55.0	0.00	6.13	F
865	866	0.029300	CCACGTGTTGCACCTTCAAG	59.971	55.0	15.65	3.02	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1763	1835	0.460987	GGGTCCTTGAGCATCGACAG	60.461	60.000	0.00	0.00	38.61	3.51	R
2029	2176	0.489567	AGGTGGACAGAGAAGAGGGT	59.510	55.000	0.00	0.00	0.00	4.34	R
2362	2529	3.119743	CGACTGAACATGGACAATGCATT	60.120	43.478	5.99	5.99	40.22	3.56	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
23	24	2.171003	GGGGGAGAAAGAAATGTGTGG	58.829	52.381	0.00	0.00	0.00	4.17
24	25	2.225017	GGGGGAGAAAGAAATGTGTGGA	60.225	50.000	0.00	0.00	0.00	4.02
25	26	3.084786	GGGGAGAAAGAAATGTGTGGAG	58.915	50.000	0.00	0.00	0.00	3.86
26	27	3.244911	GGGGAGAAAGAAATGTGTGGAGA	60.245	47.826	0.00	0.00	0.00	3.71
27	28	4.006319	GGGAGAAAGAAATGTGTGGAGAG	58.994	47.826	0.00	0.00	0.00	3.20
28	29	4.263068	GGGAGAAAGAAATGTGTGGAGAGA	60.263	45.833	0.00	0.00	0.00	3.10
29	30	4.934602	GGAGAAAGAAATGTGTGGAGAGAG	59.065	45.833	0.00	0.00	0.00	3.20
30	31	4.322567	AGAAAGAAATGTGTGGAGAGAGC	58.677	43.478	0.00	0.00	0.00	4.09
31	32	4.041444	AGAAAGAAATGTGTGGAGAGAGCT	59.959	41.667	0.00	0.00	0.00	4.09
32	33	5.247110	AGAAAGAAATGTGTGGAGAGAGCTA	59.753	40.000	0.00	0.00	0.00	3.32
33	34	4.464069	AGAAATGTGTGGAGAGAGCTAC	57.536	45.455	0.00	0.00	0.00	3.58
34	35	2.949451	AATGTGTGGAGAGAGCTACG	57.051	50.000	0.00	0.00	0.00	3.51
35	36	1.840737	ATGTGTGGAGAGAGCTACGT	58.159	50.000	0.00	0.00	0.00	3.57
36	37	2.484742	TGTGTGGAGAGAGCTACGTA	57.515	50.000	0.00	0.00	0.00	3.57
37	38	2.786777	TGTGTGGAGAGAGCTACGTAA	58.213	47.619	0.00	0.00	0.00	3.18
39	40	3.008330	GTGTGGAGAGAGCTACGTAAGA	58.992	50.000	0.00	0.00	43.62	2.10
40	41	3.064271	GTGTGGAGAGAGCTACGTAAGAG	59.936	52.174	0.00	0.00	43.62	2.85
41	42	2.614983	GTGGAGAGAGCTACGTAAGAGG	59.385	54.545	0.00	0.00	43.62	3.69
42	43	2.504585	TGGAGAGAGCTACGTAAGAGGA	59.495	50.000	0.00	0.00	43.62	3.71
43	44	3.136809	TGGAGAGAGCTACGTAAGAGGAT	59.863	47.826	0.00	0.00	43.62	3.24
44	45	4.347292	TGGAGAGAGCTACGTAAGAGGATA	59.653	45.833	0.00	0.00	43.62	2.59
45	46	5.163227	TGGAGAGAGCTACGTAAGAGGATAA	60.163	44.000	0.00	0.00	43.62	1.75
46	47	5.410439	GGAGAGAGCTACGTAAGAGGATAAG	59.590	48.000	0.00	0.00	43.62	1.73
47	48	6.177310	AGAGAGCTACGTAAGAGGATAAGA	57.823	41.667	0.00	0.00	43.62	2.10
48	49	6.775708	AGAGAGCTACGTAAGAGGATAAGAT	58.224	40.000	0.00	0.00	43.62	2.40
49	50	7.228590	AGAGAGCTACGTAAGAGGATAAGATT	58.771	38.462	0.00	0.00	43.62	2.40
50	51	7.174253	AGAGAGCTACGTAAGAGGATAAGATTG	59.826	40.741	0.00	0.00	43.62	2.67
51	52	6.999272	AGAGCTACGTAAGAGGATAAGATTGA	59.001	38.462	0.00	0.00	43.62	2.57
52	53	7.174253	AGAGCTACGTAAGAGGATAAGATTGAG	59.826	40.741	0.00	0.00	43.62	3.02
53	54	6.207810	AGCTACGTAAGAGGATAAGATTGAGG	59.792	42.308	0.00	0.00	43.62	3.86
54	55	6.207025	GCTACGTAAGAGGATAAGATTGAGGA	59.793	42.308	0.00	0.00	43.62	3.71
55	56	6.642707	ACGTAAGAGGATAAGATTGAGGAG	57.357	41.667	0.00	0.00	43.62	3.69
56	57	5.010213	ACGTAAGAGGATAAGATTGAGGAGC	59.990	44.000	0.00	0.00	43.62	4.70
57	58	5.010112	CGTAAGAGGATAAGATTGAGGAGCA	59.990	44.000	0.00	0.00	43.02	4.26
58	59	5.549742	AAGAGGATAAGATTGAGGAGCAG	57.450	43.478	0.00	0.00	0.00	4.24
59	60	4.555689	AGAGGATAAGATTGAGGAGCAGT	58.444	43.478	0.00	0.00	0.00	4.40
60	61	4.968080	AGAGGATAAGATTGAGGAGCAGTT	59.032	41.667	0.00	0.00	0.00	3.16
61	62	5.428131	AGAGGATAAGATTGAGGAGCAGTTT	59.572	40.000	0.00	0.00	0.00	2.66
62	63	5.435291	AGGATAAGATTGAGGAGCAGTTTG	58.565	41.667	0.00	0.00	0.00	2.93
63	64	5.045286	AGGATAAGATTGAGGAGCAGTTTGT	60.045	40.000	0.00	0.00	0.00	2.83
64	65	5.649831	GGATAAGATTGAGGAGCAGTTTGTT	59.350	40.000	0.00	0.00	0.00	2.83
65	66	4.843220	AAGATTGAGGAGCAGTTTGTTG	57.157	40.909	0.00	0.00	0.00	3.33
66	67	3.825328	AGATTGAGGAGCAGTTTGTTGT	58.175	40.909	0.00	0.00	0.00	3.32
67	68	3.567164	AGATTGAGGAGCAGTTTGTTGTG	59.433	43.478	0.00	0.00	0.00	3.33
68	69	2.418368	TGAGGAGCAGTTTGTTGTGT	57.582	45.000	0.00	0.00	0.00	3.72
69	70	2.016318	TGAGGAGCAGTTTGTTGTGTG	58.984	47.619	0.00	0.00	0.00	3.82
70	71	2.017049	GAGGAGCAGTTTGTTGTGTGT	58.983	47.619	0.00	0.00	0.00	3.72
71	72	1.745087	AGGAGCAGTTTGTTGTGTGTG	59.255	47.619	0.00	0.00	0.00	3.82
72	73	1.202290	GGAGCAGTTTGTTGTGTGTGG	60.202	52.381	0.00	0.00	0.00	4.17
73	74	0.817013	AGCAGTTTGTTGTGTGTGGG	59.183	50.000	0.00	0.00	0.00	4.61
74	75	0.179113	GCAGTTTGTTGTGTGTGGGG	60.179	55.000	0.00	0.00	0.00	4.96
75	76	0.459489	CAGTTTGTTGTGTGTGGGGG	59.541	55.000	0.00	0.00	0.00	5.40
103	104	4.988598	ACGTGGCGTGCAAGGAGG	62.989	66.667	0.79	0.00	39.18	4.30
109	110	2.047655	CGTGCAAGGAGGCGGTTA	60.048	61.111	0.00	0.00	36.28	2.85
110	111	1.669760	CGTGCAAGGAGGCGGTTAA	60.670	57.895	0.00	0.00	36.28	2.01
111	112	1.873863	GTGCAAGGAGGCGGTTAAC	59.126	57.895	0.00	0.00	36.28	2.01
113	114	2.396157	GCAAGGAGGCGGTTAACGG	61.396	63.158	8.71	8.71	44.51	4.44
114	115	1.743995	CAAGGAGGCGGTTAACGGG	60.744	63.158	14.24	3.40	44.51	5.28
115	116	2.963101	AAGGAGGCGGTTAACGGGG	61.963	63.158	14.24	0.99	44.51	5.73
116	117	3.393106	GGAGGCGGTTAACGGGGA	61.393	66.667	14.24	0.00	44.51	4.81
117	118	2.186125	GAGGCGGTTAACGGGGAG	59.814	66.667	14.24	0.00	44.51	4.30
118	119	2.284112	AGGCGGTTAACGGGGAGA	60.284	61.111	14.24	0.00	44.51	3.71
119	120	1.891722	GAGGCGGTTAACGGGGAGAA	61.892	60.000	14.24	0.00	44.51	2.87
120	121	1.003476	GGCGGTTAACGGGGAGAAA	60.003	57.895	14.24	0.00	44.51	2.52
121	122	0.606130	GGCGGTTAACGGGGAGAAAA	60.606	55.000	14.24	0.00	44.51	2.29
122	123	0.800631	GCGGTTAACGGGGAGAAAAG	59.199	55.000	14.24	0.00	44.51	2.27
123	124	1.608801	GCGGTTAACGGGGAGAAAAGA	60.609	52.381	14.24	0.00	44.51	2.52
124	125	2.938314	GCGGTTAACGGGGAGAAAAGAT	60.938	50.000	14.24	0.00	44.51	2.40
125	126	2.934553	CGGTTAACGGGGAGAAAAGATC	59.065	50.000	5.30	0.00	39.42	2.75
126	127	3.618019	CGGTTAACGGGGAGAAAAGATCA	60.618	47.826	5.30	0.00	39.42	2.92
127	128	3.688185	GGTTAACGGGGAGAAAAGATCAC	59.312	47.826	0.00	0.00	0.00	3.06
128	129	4.565028	GGTTAACGGGGAGAAAAGATCACT	60.565	45.833	0.00	0.00	0.00	3.41
129	130	3.336138	AACGGGGAGAAAAGATCACTC	57.664	47.619	0.00	0.00	0.00	3.51
130	131	1.204941	ACGGGGAGAAAAGATCACTCG	59.795	52.381	0.00	0.00	37.25	4.18
131	132	1.476891	CGGGGAGAAAAGATCACTCGA	59.523	52.381	0.00	0.00	34.31	4.04
132	133	2.480416	CGGGGAGAAAAGATCACTCGAG	60.480	54.545	11.84	11.84	34.31	4.04
133	134	2.498078	GGGGAGAAAAGATCACTCGAGT	59.502	50.000	13.58	13.58	0.00	4.18
134	135	3.516615	GGGAGAAAAGATCACTCGAGTG	58.483	50.000	34.76	34.76	46.91	3.51
135	136	3.056465	GGGAGAAAAGATCACTCGAGTGT	60.056	47.826	37.21	26.87	45.76	3.55
136	137	4.561105	GGAGAAAAGATCACTCGAGTGTT	58.439	43.478	37.21	31.45	45.76	3.32
137	138	4.991687	GGAGAAAAGATCACTCGAGTGTTT	59.008	41.667	37.21	30.14	45.76	2.83
138	139	5.467063	GGAGAAAAGATCACTCGAGTGTTTT	59.533	40.000	37.21	33.24	45.76	2.43
139	140	6.346999	GGAGAAAAGATCACTCGAGTGTTTTC	60.347	42.308	36.31	36.31	45.76	2.29
140	141	6.049149	AGAAAAGATCACTCGAGTGTTTTCA	58.951	36.000	39.52	28.06	43.44	2.69
141	142	6.538742	AGAAAAGATCACTCGAGTGTTTTCAA	59.461	34.615	39.52	27.55	43.44	2.69
142	143	5.914085	AAGATCACTCGAGTGTTTTCAAG	57.086	39.130	37.21	15.88	45.76	3.02
143	144	5.201713	AGATCACTCGAGTGTTTTCAAGA	57.798	39.130	37.21	20.81	45.76	3.02
144	145	5.226396	AGATCACTCGAGTGTTTTCAAGAG	58.774	41.667	37.21	14.50	45.76	2.85
145	146	4.386867	TCACTCGAGTGTTTTCAAGAGT	57.613	40.909	37.21	2.30	45.76	3.24
146	147	4.755411	TCACTCGAGTGTTTTCAAGAGTT	58.245	39.130	37.21	0.90	45.76	3.01
147	148	5.175859	TCACTCGAGTGTTTTCAAGAGTTT	58.824	37.500	37.21	0.22	45.76	2.66
148	149	5.642063	TCACTCGAGTGTTTTCAAGAGTTTT	59.358	36.000	37.21	0.00	45.76	2.43
149	150	5.960105	CACTCGAGTGTTTTCAAGAGTTTTC	59.040	40.000	32.77	0.00	40.96	2.29
150	151	5.064834	ACTCGAGTGTTTTCAAGAGTTTTCC	59.935	40.000	19.30	0.00	37.74	3.13
151	152	4.938832	TCGAGTGTTTTCAAGAGTTTTCCA	59.061	37.500	0.00	0.00	0.00	3.53
152	153	5.413213	TCGAGTGTTTTCAAGAGTTTTCCAA	59.587	36.000	0.00	0.00	0.00	3.53
153	154	6.094881	TCGAGTGTTTTCAAGAGTTTTCCAAT	59.905	34.615	0.00	0.00	0.00	3.16
154	155	7.281324	TCGAGTGTTTTCAAGAGTTTTCCAATA	59.719	33.333	0.00	0.00	0.00	1.90
155	156	7.913297	CGAGTGTTTTCAAGAGTTTTCCAATAA	59.087	33.333	0.00	0.00	0.00	1.40
156	157	9.581099	GAGTGTTTTCAAGAGTTTTCCAATAAA	57.419	29.630	0.00	0.00	0.00	1.40
159	160	8.825745	TGTTTTCAAGAGTTTTCCAATAAATGC	58.174	29.630	0.00	0.00	0.00	3.56
160	161	9.045223	GTTTTCAAGAGTTTTCCAATAAATGCT	57.955	29.630	0.00	0.00	0.00	3.79
161	162	8.592105	TTTCAAGAGTTTTCCAATAAATGCTG	57.408	30.769	0.00	0.00	0.00	4.41
162	163	7.523293	TCAAGAGTTTTCCAATAAATGCTGA	57.477	32.000	0.00	0.00	0.00	4.26
163	164	7.370383	TCAAGAGTTTTCCAATAAATGCTGAC	58.630	34.615	0.00	0.00	0.00	3.51
164	165	6.272822	AGAGTTTTCCAATAAATGCTGACC	57.727	37.500	0.00	0.00	0.00	4.02
165	166	6.012745	AGAGTTTTCCAATAAATGCTGACCT	58.987	36.000	0.00	0.00	0.00	3.85
166	167	7.175104	AGAGTTTTCCAATAAATGCTGACCTA	58.825	34.615	0.00	0.00	0.00	3.08
167	168	7.337942	AGAGTTTTCCAATAAATGCTGACCTAG	59.662	37.037	0.00	0.00	0.00	3.02
168	169	6.378280	AGTTTTCCAATAAATGCTGACCTAGG	59.622	38.462	7.41	7.41	0.00	3.02
169	170	3.820557	TCCAATAAATGCTGACCTAGGC	58.179	45.455	9.30	2.11	0.00	3.93
170	171	2.887152	CCAATAAATGCTGACCTAGGCC	59.113	50.000	9.30	0.00	0.00	5.19
171	172	2.549754	CAATAAATGCTGACCTAGGCCG	59.450	50.000	9.30	0.00	0.00	6.13
172	173	0.179056	TAAATGCTGACCTAGGCCGC	60.179	55.000	9.30	9.63	0.00	6.53
173	174	2.196997	AAATGCTGACCTAGGCCGCA	62.197	55.000	18.81	18.81	34.83	5.69
174	175	2.599645	AATGCTGACCTAGGCCGCAG	62.600	60.000	20.45	19.21	33.72	5.18
175	176	3.775654	GCTGACCTAGGCCGCAGT	61.776	66.667	21.24	0.00	0.00	4.40
176	177	2.496817	CTGACCTAGGCCGCAGTC	59.503	66.667	9.30	13.31	0.00	3.51
177	178	2.283604	TGACCTAGGCCGCAGTCA	60.284	61.111	17.48	17.48	32.18	3.41
178	179	2.184579	GACCTAGGCCGCAGTCAC	59.815	66.667	9.30	0.44	0.00	3.67
179	180	2.603473	ACCTAGGCCGCAGTCACA	60.603	61.111	9.30	0.00	0.00	3.58
180	181	2.125512	CCTAGGCCGCAGTCACAC	60.126	66.667	0.00	0.00	0.00	3.82
181	182	2.650116	CCTAGGCCGCAGTCACACT	61.650	63.158	0.00	0.00	0.00	3.55
182	183	1.153745	CTAGGCCGCAGTCACACTC	60.154	63.158	0.00	0.00	0.00	3.51
183	184	1.877576	CTAGGCCGCAGTCACACTCA	61.878	60.000	0.00	0.00	0.00	3.41
184	185	2.154798	TAGGCCGCAGTCACACTCAC	62.155	60.000	0.00	0.00	0.00	3.51
185	186	2.280119	GCCGCAGTCACACTCACA	60.280	61.111	0.00	0.00	0.00	3.58
186	187	2.598632	GCCGCAGTCACACTCACAC	61.599	63.158	0.00	0.00	0.00	3.82
187	188	1.956170	CCGCAGTCACACTCACACC	60.956	63.158	0.00	0.00	0.00	4.16
188	189	2.302952	CGCAGTCACACTCACACCG	61.303	63.158	0.00	0.00	0.00	4.94
189	190	1.227263	GCAGTCACACTCACACCGT	60.227	57.895	0.00	0.00	0.00	4.83
190	191	0.031585	GCAGTCACACTCACACCGTA	59.968	55.000	0.00	0.00	0.00	4.02
191	192	1.537348	GCAGTCACACTCACACCGTAA	60.537	52.381	0.00	0.00	0.00	3.18
192	193	2.394708	CAGTCACACTCACACCGTAAG	58.605	52.381	0.00	0.00	0.00	2.34
213	214	4.832741	CCGTTTGGGACCCAATCA	57.167	55.556	26.78	10.33	43.55	2.57
214	215	3.043998	CCGTTTGGGACCCAATCAA	57.956	52.632	26.78	9.52	43.55	2.57
215	216	0.601057	CCGTTTGGGACCCAATCAAC	59.399	55.000	26.78	19.83	43.55	3.18
216	217	0.601057	CGTTTGGGACCCAATCAACC	59.399	55.000	26.78	11.18	43.55	3.77
217	218	1.710816	GTTTGGGACCCAATCAACCA	58.289	50.000	26.78	7.92	43.55	3.67
218	219	2.043227	GTTTGGGACCCAATCAACCAA	58.957	47.619	26.78	7.14	43.55	3.67
219	220	2.436173	GTTTGGGACCCAATCAACCAAA	59.564	45.455	26.78	6.34	43.55	3.28
220	221	1.710816	TGGGACCCAATCAACCAAAC	58.289	50.000	12.05	0.00	0.00	2.93
221	222	0.973632	GGGACCCAATCAACCAAACC	59.026	55.000	5.33	0.00	0.00	3.27
222	223	1.482365	GGGACCCAATCAACCAAACCT	60.482	52.381	5.33	0.00	0.00	3.50
223	224	1.618343	GGACCCAATCAACCAAACCTG	59.382	52.381	0.00	0.00	0.00	4.00
232	233	2.733945	CCAAACCTGGCCAAACGG	59.266	61.111	7.01	7.56	35.39	4.44
233	234	2.733945	CAAACCTGGCCAAACGGG	59.266	61.111	7.01	7.12	42.81	5.28
261	262	4.468769	ATGGCCCGACCCGACCTA	62.469	66.667	0.00	0.00	37.83	3.08
262	263	3.768833	ATGGCCCGACCCGACCTAT	62.769	63.158	0.00	0.00	37.83	2.57
263	264	3.925090	GGCCCGACCCGACCTATG	61.925	72.222	0.00	0.00	0.00	2.23
264	265	4.603946	GCCCGACCCGACCTATGC	62.604	72.222	0.00	0.00	0.00	3.14
265	266	2.838225	CCCGACCCGACCTATGCT	60.838	66.667	0.00	0.00	0.00	3.79
266	267	1.529948	CCCGACCCGACCTATGCTA	60.530	63.158	0.00	0.00	0.00	3.49
267	268	0.898789	CCCGACCCGACCTATGCTAT	60.899	60.000	0.00	0.00	0.00	2.97
268	269	1.615116	CCCGACCCGACCTATGCTATA	60.615	57.143	0.00	0.00	0.00	1.31
269	270	1.743958	CCGACCCGACCTATGCTATAG	59.256	57.143	0.00	0.00	0.00	1.31
270	271	2.434428	CGACCCGACCTATGCTATAGT	58.566	52.381	0.84	0.00	0.00	2.12
271	272	2.818432	CGACCCGACCTATGCTATAGTT	59.182	50.000	0.84	0.00	0.00	2.24
272	273	3.366070	CGACCCGACCTATGCTATAGTTG	60.366	52.174	0.84	0.00	0.00	3.16
273	274	2.897969	ACCCGACCTATGCTATAGTTGG	59.102	50.000	0.84	1.84	34.10	3.77
274	275	2.353803	CCCGACCTATGCTATAGTTGGC	60.354	54.545	0.84	0.00	33.13	4.52
275	276	2.353803	CCGACCTATGCTATAGTTGGCC	60.354	54.545	0.00	0.00	0.00	5.36
276	277	2.299013	CGACCTATGCTATAGTTGGCCA	59.701	50.000	0.00	0.00	0.00	5.36
277	278	3.244078	CGACCTATGCTATAGTTGGCCAA	60.244	47.826	16.05	16.05	0.00	4.52
278	279	4.714632	GACCTATGCTATAGTTGGCCAAA	58.285	43.478	22.47	5.91	0.00	3.28
279	280	5.316987	GACCTATGCTATAGTTGGCCAAAT	58.683	41.667	23.58	23.58	0.00	2.32
280	281	5.072741	ACCTATGCTATAGTTGGCCAAATG	58.927	41.667	27.93	12.79	0.00	2.32
281	282	4.460382	CCTATGCTATAGTTGGCCAAATGG	59.540	45.833	27.93	17.61	38.53	3.16
282	283	2.665165	TGCTATAGTTGGCCAAATGGG	58.335	47.619	27.93	17.24	40.85	4.00
342	343	4.408821	GCCATGGGCCAGACACGA	62.409	66.667	15.13	0.00	44.06	4.35
343	344	2.436646	CCATGGGCCAGACACGAC	60.437	66.667	13.78	0.00	0.00	4.34
344	345	2.347114	CATGGGCCAGACACGACA	59.653	61.111	13.78	0.00	0.00	4.35
345	346	1.302431	CATGGGCCAGACACGACAA	60.302	57.895	13.78	0.00	0.00	3.18
346	347	1.003355	ATGGGCCAGACACGACAAG	60.003	57.895	13.78	0.00	0.00	3.16
347	348	2.358737	GGGCCAGACACGACAAGG	60.359	66.667	4.39	0.00	0.00	3.61
348	349	2.358737	GGCCAGACACGACAAGGG	60.359	66.667	0.00	0.00	0.00	3.95
349	350	3.050275	GCCAGACACGACAAGGGC	61.050	66.667	0.00	0.00	0.00	5.19
350	351	2.743718	CCAGACACGACAAGGGCT	59.256	61.111	0.00	0.00	0.00	5.19
351	352	1.972198	CCAGACACGACAAGGGCTA	59.028	57.895	0.00	0.00	0.00	3.93
352	353	0.320374	CCAGACACGACAAGGGCTAA	59.680	55.000	0.00	0.00	0.00	3.09
353	354	1.270625	CCAGACACGACAAGGGCTAAA	60.271	52.381	0.00	0.00	0.00	1.85
354	355	1.798813	CAGACACGACAAGGGCTAAAC	59.201	52.381	0.00	0.00	0.00	2.01
355	356	0.788391	GACACGACAAGGGCTAAACG	59.212	55.000	0.00	0.00	0.00	3.60
356	357	0.601841	ACACGACAAGGGCTAAACGG	60.602	55.000	0.00	0.00	0.00	4.44
357	358	1.004200	ACGACAAGGGCTAAACGGG	60.004	57.895	0.00	0.00	0.00	5.28
358	359	2.396157	CGACAAGGGCTAAACGGGC	61.396	63.158	0.00	0.00	0.00	6.13
384	385	4.771356	GCACGCTGCATGCACTGG	62.771	66.667	18.46	8.85	44.26	4.00
385	386	4.111016	CACGCTGCATGCACTGGG	62.111	66.667	18.46	18.58	43.06	4.45
392	393	2.985282	CATGCACTGGGCCGTGTT	60.985	61.111	22.92	12.58	43.89	3.32
393	394	2.203480	ATGCACTGGGCCGTGTTT	60.203	55.556	22.92	12.32	43.89	2.83
394	395	2.563798	ATGCACTGGGCCGTGTTTG	61.564	57.895	22.92	7.58	43.89	2.93
395	396	3.977244	GCACTGGGCCGTGTTTGG	61.977	66.667	22.92	5.88	37.24	3.28
396	397	3.294493	CACTGGGCCGTGTTTGGG	61.294	66.667	16.88	0.00	0.00	4.12
397	398	4.596585	ACTGGGCCGTGTTTGGGG	62.597	66.667	0.00	0.00	0.00	4.96
398	399	4.596585	CTGGGCCGTGTTTGGGGT	62.597	66.667	0.00	0.00	0.00	4.95
399	400	4.904590	TGGGCCGTGTTTGGGGTG	62.905	66.667	0.00	0.00	0.00	4.61
402	403	2.281900	GCCGTGTTTGGGGTGCTA	60.282	61.111	0.00	0.00	0.00	3.49
403	404	2.332654	GCCGTGTTTGGGGTGCTAG	61.333	63.158	0.00	0.00	0.00	3.42
404	405	1.674322	CCGTGTTTGGGGTGCTAGG	60.674	63.158	0.00	0.00	0.00	3.02
405	406	2.332654	CGTGTTTGGGGTGCTAGGC	61.333	63.158	0.00	0.00	0.00	3.93
406	407	1.074951	GTGTTTGGGGTGCTAGGCT	59.925	57.895	0.00	0.00	0.00	4.58
407	408	1.074775	TGTTTGGGGTGCTAGGCTG	59.925	57.895	0.00	0.00	0.00	4.85
408	409	1.378762	GTTTGGGGTGCTAGGCTGA	59.621	57.895	0.00	0.00	0.00	4.26
409	410	0.678048	GTTTGGGGTGCTAGGCTGAG	60.678	60.000	0.00	0.00	0.00	3.35
410	411	2.484287	TTTGGGGTGCTAGGCTGAGC	62.484	60.000	0.00	0.00	43.16	4.26
417	418	4.880537	CTAGGCTGAGCACGCGGG	62.881	72.222	12.47	7.92	0.00	6.13
439	440	4.488136	CACAGCATGGCCCGCCTA	62.488	66.667	10.49	0.00	43.62	3.93
440	441	3.727258	ACAGCATGGCCCGCCTAA	61.727	61.111	10.49	0.00	43.62	2.69
441	442	2.203394	CAGCATGGCCCGCCTAAT	60.203	61.111	10.49	0.00	36.94	1.73
442	443	1.829533	CAGCATGGCCCGCCTAATT	60.830	57.895	10.49	0.00	36.94	1.40
443	444	0.537143	CAGCATGGCCCGCCTAATTA	60.537	55.000	10.49	0.00	36.94	1.40
444	445	0.405585	AGCATGGCCCGCCTAATTAT	59.594	50.000	10.49	0.00	36.94	1.28
445	446	0.811281	GCATGGCCCGCCTAATTATC	59.189	55.000	7.35	0.00	36.94	1.75
446	447	1.614317	GCATGGCCCGCCTAATTATCT	60.614	52.381	7.35	0.00	36.94	1.98
447	448	2.795329	CATGGCCCGCCTAATTATCTT	58.205	47.619	7.35	0.00	36.94	2.40
448	449	3.157087	CATGGCCCGCCTAATTATCTTT	58.843	45.455	7.35	0.00	36.94	2.52
449	450	3.306472	TGGCCCGCCTAATTATCTTTT	57.694	42.857	7.35	0.00	36.94	2.27
450	451	3.637769	TGGCCCGCCTAATTATCTTTTT	58.362	40.909	7.35	0.00	36.94	1.94
485	486	6.898171	ATATCTCTATATGGCCCAACATGT	57.102	37.500	0.00	0.00	32.39	3.21
486	487	7.995052	ATATCTCTATATGGCCCAACATGTA	57.005	36.000	0.00	0.00	32.39	2.29
487	488	6.702449	ATCTCTATATGGCCCAACATGTAA	57.298	37.500	0.00	0.00	32.39	2.41
488	489	6.508030	TCTCTATATGGCCCAACATGTAAA	57.492	37.500	0.00	0.00	32.39	2.01
489	490	6.905736	TCTCTATATGGCCCAACATGTAAAA	58.094	36.000	0.00	0.00	32.39	1.52
490	491	7.350382	TCTCTATATGGCCCAACATGTAAAAA	58.650	34.615	0.00	0.00	32.39	1.94
491	492	8.004215	TCTCTATATGGCCCAACATGTAAAAAT	58.996	33.333	0.00	0.00	32.39	1.82
492	493	9.295825	CTCTATATGGCCCAACATGTAAAAATA	57.704	33.333	0.00	0.00	32.39	1.40
493	494	9.295825	TCTATATGGCCCAACATGTAAAAATAG	57.704	33.333	0.00	0.01	32.39	1.73
494	495	9.295825	CTATATGGCCCAACATGTAAAAATAGA	57.704	33.333	0.00	0.00	32.39	1.98
495	496	5.652994	TGGCCCAACATGTAAAAATAGAC	57.347	39.130	0.00	0.00	0.00	2.59
496	497	5.329399	TGGCCCAACATGTAAAAATAGACT	58.671	37.500	0.00	0.00	0.00	3.24
497	498	6.486056	TGGCCCAACATGTAAAAATAGACTA	58.514	36.000	0.00	0.00	0.00	2.59
498	499	6.948886	TGGCCCAACATGTAAAAATAGACTAA	59.051	34.615	0.00	0.00	0.00	2.24
499	500	7.451877	TGGCCCAACATGTAAAAATAGACTAAA	59.548	33.333	0.00	0.00	0.00	1.85
500	501	8.308207	GGCCCAACATGTAAAAATAGACTAAAA	58.692	33.333	0.00	0.00	0.00	1.52
501	502	9.699703	GCCCAACATGTAAAAATAGACTAAAAA	57.300	29.630	0.00	0.00	0.00	1.94
505	506	8.959734	ACATGTAAAAATAGACTAAAAACGCC	57.040	30.769	0.00	0.00	0.00	5.68
506	507	8.024865	ACATGTAAAAATAGACTAAAAACGCCC	58.975	33.333	0.00	0.00	0.00	6.13
507	508	7.507733	TGTAAAAATAGACTAAAAACGCCCA	57.492	32.000	0.00	0.00	0.00	5.36
508	509	7.586747	TGTAAAAATAGACTAAAAACGCCCAG	58.413	34.615	0.00	0.00	0.00	4.45
509	510	6.644248	AAAAATAGACTAAAAACGCCCAGT	57.356	33.333	0.00	0.00	0.00	4.00
510	511	5.622770	AAATAGACTAAAAACGCCCAGTG	57.377	39.130	0.00	0.00	0.00	3.66
511	512	1.235724	AGACTAAAAACGCCCAGTGC	58.764	50.000	0.00	0.00	0.00	4.40
520	521	4.792106	GCCCAGTGCGCAAAATAG	57.208	55.556	14.00	0.75	0.00	1.73
521	522	1.517039	GCCCAGTGCGCAAAATAGC	60.517	57.895	14.00	8.44	0.00	2.97
522	523	1.882311	CCCAGTGCGCAAAATAGCA	59.118	52.632	14.00	0.00	41.55	3.49
523	524	0.179156	CCCAGTGCGCAAAATAGCAG	60.179	55.000	14.00	0.00	44.70	4.24
524	525	0.523072	CCAGTGCGCAAAATAGCAGT	59.477	50.000	14.00	0.00	46.74	4.40
525	526	1.466360	CCAGTGCGCAAAATAGCAGTC	60.466	52.381	14.00	0.00	44.30	3.51
526	527	1.197492	CAGTGCGCAAAATAGCAGTCA	59.803	47.619	14.00	0.00	44.30	3.41
527	528	1.466167	AGTGCGCAAAATAGCAGTCAG	59.534	47.619	14.00	0.00	42.75	3.51
528	529	1.464608	GTGCGCAAAATAGCAGTCAGA	59.535	47.619	14.00	0.00	44.70	3.27
529	530	1.464608	TGCGCAAAATAGCAGTCAGAC	59.535	47.619	8.16	0.00	38.59	3.51
530	531	1.734465	GCGCAAAATAGCAGTCAGACT	59.266	47.619	0.30	0.00	0.00	3.24
531	532	2.930040	GCGCAAAATAGCAGTCAGACTA	59.070	45.455	0.30	0.00	0.00	2.59
532	533	3.000724	GCGCAAAATAGCAGTCAGACTAG	59.999	47.826	0.30	0.00	0.00	2.57
533	534	3.000724	CGCAAAATAGCAGTCAGACTAGC	59.999	47.826	1.67	9.56	0.00	3.42
534	535	3.000724	GCAAAATAGCAGTCAGACTAGCG	59.999	47.826	1.67	0.00	30.98	4.26
535	536	4.177026	CAAAATAGCAGTCAGACTAGCGT	58.823	43.478	1.67	2.19	30.98	5.07
536	537	3.428746	AATAGCAGTCAGACTAGCGTG	57.571	47.619	1.67	0.00	30.98	5.34
537	538	0.452184	TAGCAGTCAGACTAGCGTGC	59.548	55.000	1.67	3.04	30.98	5.34
538	539	1.807573	GCAGTCAGACTAGCGTGCC	60.808	63.158	1.67	0.00	0.00	5.01
539	540	1.886585	CAGTCAGACTAGCGTGCCT	59.113	57.895	1.67	0.00	0.00	4.75
540	541	0.457509	CAGTCAGACTAGCGTGCCTG	60.458	60.000	1.67	0.00	0.00	4.85
541	542	1.153745	GTCAGACTAGCGTGCCTGG	60.154	63.158	0.00	0.00	0.00	4.45
542	543	2.510238	CAGACTAGCGTGCCTGGC	60.510	66.667	12.87	12.87	0.00	4.85
543	544	4.135153	AGACTAGCGTGCCTGGCG	62.135	66.667	14.98	1.19	35.00	5.69
544	545	4.436998	GACTAGCGTGCCTGGCGT	62.437	66.667	14.98	4.09	35.00	5.68
545	546	4.742201	ACTAGCGTGCCTGGCGTG	62.742	66.667	14.98	9.93	35.00	5.34
546	547	4.742201	CTAGCGTGCCTGGCGTGT	62.742	66.667	14.98	0.90	35.00	4.49
547	548	4.735132	TAGCGTGCCTGGCGTGTC	62.735	66.667	14.98	3.10	35.00	3.67
569	570	2.592861	GGCCAGCCCGATTAGCAG	60.593	66.667	0.00	0.00	0.00	4.24
570	571	3.282920	GCCAGCCCGATTAGCAGC	61.283	66.667	0.00	0.00	0.00	5.25
571	572	2.592861	CCAGCCCGATTAGCAGCC	60.593	66.667	0.00	0.00	0.00	4.85
572	573	2.969238	CAGCCCGATTAGCAGCCG	60.969	66.667	0.00	0.00	0.00	5.52
573	574	4.241555	AGCCCGATTAGCAGCCGG	62.242	66.667	0.00	0.00	42.64	6.13
578	579	4.547367	GATTAGCAGCCGGGCCGT	62.547	66.667	26.32	8.37	0.00	5.68
579	580	4.856801	ATTAGCAGCCGGGCCGTG	62.857	66.667	26.32	18.62	0.00	4.94
635	636	2.676342	GGCAAGGCCCGTATAATAATCG	59.324	50.000	0.00	0.00	44.06	3.34
636	637	3.332034	GCAAGGCCCGTATAATAATCGT	58.668	45.455	0.00	0.00	0.00	3.73
637	638	3.124636	GCAAGGCCCGTATAATAATCGTG	59.875	47.826	0.00	0.00	0.00	4.35
638	639	2.968675	AGGCCCGTATAATAATCGTGC	58.031	47.619	0.00	0.00	0.00	5.34
639	640	2.004733	GGCCCGTATAATAATCGTGCC	58.995	52.381	0.00	0.00	40.23	5.01
640	641	2.354403	GGCCCGTATAATAATCGTGCCT	60.354	50.000	0.00	0.00	42.74	4.75
641	642	3.119029	GGCCCGTATAATAATCGTGCCTA	60.119	47.826	0.00	0.00	42.74	3.93
642	643	4.110482	GCCCGTATAATAATCGTGCCTAG	58.890	47.826	0.00	0.00	0.00	3.02
643	644	4.679662	CCCGTATAATAATCGTGCCTAGG	58.320	47.826	3.67	3.67	0.00	3.02
644	645	4.110482	CCGTATAATAATCGTGCCTAGGC	58.890	47.826	27.71	27.71	42.35	3.93
645	646	3.789756	CGTATAATAATCGTGCCTAGGCG	59.210	47.826	28.28	15.51	45.51	5.52
646	647	2.736144	TAATAATCGTGCCTAGGCGG	57.264	50.000	28.28	21.97	45.51	6.13
647	648	0.034896	AATAATCGTGCCTAGGCGGG	59.965	55.000	28.28	21.60	45.51	6.13
675	676	3.658351	GTGCCAGACACGATTACAATC	57.342	47.619	0.00	0.00	40.07	2.67
683	684	3.340789	GATTACAATCGGCCGGGC	58.659	61.111	27.83	20.04	0.00	6.13
684	685	2.203294	ATTACAATCGGCCGGGCC	60.203	61.111	28.61	28.61	46.75	5.80
709	710	4.362476	GCAGGGCCGGCTTGTTTG	62.362	66.667	28.56	17.53	0.00	2.93
710	711	3.683937	CAGGGCCGGCTTGTTTGG	61.684	66.667	28.56	5.39	0.00	3.28
721	722	2.813779	CTTGTTTGGCGAGCTATGAC	57.186	50.000	0.00	0.00	0.00	3.06
722	723	1.398390	CTTGTTTGGCGAGCTATGACC	59.602	52.381	0.00	0.00	0.00	4.02
723	724	0.613260	TGTTTGGCGAGCTATGACCT	59.387	50.000	0.00	0.00	0.00	3.85
724	725	1.828595	TGTTTGGCGAGCTATGACCTA	59.171	47.619	0.00	0.00	0.00	3.08
725	726	2.202566	GTTTGGCGAGCTATGACCTAC	58.797	52.381	0.00	0.00	0.00	3.18
726	727	0.384309	TTGGCGAGCTATGACCTACG	59.616	55.000	0.00	0.00	0.00	3.51
727	728	1.371881	GGCGAGCTATGACCTACGC	60.372	63.158	0.00	0.00	44.18	4.42
728	729	1.655329	GCGAGCTATGACCTACGCT	59.345	57.895	0.00	0.00	42.19	5.07
729	730	0.873054	GCGAGCTATGACCTACGCTA	59.127	55.000	0.00	0.00	42.19	4.26
730	731	1.266175	GCGAGCTATGACCTACGCTAA	59.734	52.381	0.00	0.00	42.19	3.09
731	732	2.095161	GCGAGCTATGACCTACGCTAAT	60.095	50.000	0.00	0.00	42.19	1.73
732	733	3.612004	GCGAGCTATGACCTACGCTAATT	60.612	47.826	0.00	0.00	42.19	1.40
733	734	3.914966	CGAGCTATGACCTACGCTAATTG	59.085	47.826	0.00	0.00	31.96	2.32
734	735	4.556898	CGAGCTATGACCTACGCTAATTGT	60.557	45.833	0.00	0.00	31.96	2.71
735	736	4.621991	AGCTATGACCTACGCTAATTGTG	58.378	43.478	0.00	0.00	0.00	3.33
736	737	3.184581	GCTATGACCTACGCTAATTGTGC	59.815	47.826	0.00	0.00	0.00	4.57
737	738	2.018542	TGACCTACGCTAATTGTGCC	57.981	50.000	0.00	0.00	0.00	5.01
738	739	1.276705	TGACCTACGCTAATTGTGCCA	59.723	47.619	0.00	0.00	0.00	4.92
739	740	1.664151	GACCTACGCTAATTGTGCCAC	59.336	52.381	0.00	0.00	0.00	5.01
740	741	0.650512	CCTACGCTAATTGTGCCACG	59.349	55.000	0.00	0.00	0.00	4.94
741	742	0.026285	CTACGCTAATTGTGCCACGC	59.974	55.000	0.00	0.00	0.00	5.34
742	743	0.670854	TACGCTAATTGTGCCACGCA	60.671	50.000	0.00	0.00	35.60	5.24
754	755	4.934942	CACGCACGACACGACCCA	62.935	66.667	0.00	0.00	0.00	4.51
755	756	3.986006	ACGCACGACACGACCCAT	61.986	61.111	0.00	0.00	0.00	4.00
756	757	3.478394	CGCACGACACGACCCATG	61.478	66.667	0.00	0.00	0.00	3.66
757	758	2.048597	GCACGACACGACCCATGA	60.049	61.111	0.00	0.00	0.00	3.07
758	759	2.094659	GCACGACACGACCCATGAG	61.095	63.158	0.00	0.00	0.00	2.90
759	760	1.446099	CACGACACGACCCATGAGG	60.446	63.158	0.00	0.00	43.78	3.86
774	775	4.558538	CATGAGGGCATGTTTACTAAGC	57.441	45.455	0.00	0.00	45.41	3.09
775	776	2.627945	TGAGGGCATGTTTACTAAGCG	58.372	47.619	0.00	0.00	0.00	4.68
776	777	1.940613	GAGGGCATGTTTACTAAGCGG	59.059	52.381	0.00	0.00	0.00	5.52
777	778	1.021968	GGGCATGTTTACTAAGCGGG	58.978	55.000	0.00	0.00	0.00	6.13
778	779	0.380733	GGCATGTTTACTAAGCGGGC	59.619	55.000	0.00	0.00	0.00	6.13
779	780	0.027586	GCATGTTTACTAAGCGGGCG	59.972	55.000	0.00	0.00	0.00	6.13
780	781	1.365699	CATGTTTACTAAGCGGGCGT	58.634	50.000	0.00	0.00	0.00	5.68
781	782	1.062002	CATGTTTACTAAGCGGGCGTG	59.938	52.381	0.00	0.00	0.00	5.34
782	783	0.033781	TGTTTACTAAGCGGGCGTGT	59.966	50.000	0.00	0.00	0.00	4.49
783	784	0.717784	GTTTACTAAGCGGGCGTGTC	59.282	55.000	0.00	0.00	0.00	3.67
784	785	0.733566	TTTACTAAGCGGGCGTGTCG	60.734	55.000	0.00	0.00	0.00	4.35
785	786	1.865788	TTACTAAGCGGGCGTGTCGT	61.866	55.000	0.00	0.00	0.00	4.34
786	787	2.531927	TACTAAGCGGGCGTGTCGTG	62.532	60.000	0.00	0.00	0.00	4.35
808	809	3.357079	CCCACGTGCTGCACCTTC	61.357	66.667	25.61	2.43	0.00	3.46
809	810	2.591429	CCACGTGCTGCACCTTCA	60.591	61.111	25.61	0.00	0.00	3.02
810	811	2.186160	CCACGTGCTGCACCTTCAA	61.186	57.895	25.61	0.00	0.00	2.69
811	812	1.280746	CACGTGCTGCACCTTCAAG	59.719	57.895	25.61	13.51	0.00	3.02
812	813	2.253452	CGTGCTGCACCTTCAAGC	59.747	61.111	25.61	0.00	0.00	4.01
813	814	2.647297	GTGCTGCACCTTCAAGCC	59.353	61.111	21.78	0.00	0.00	4.35
814	815	2.598394	TGCTGCACCTTCAAGCCC	60.598	61.111	0.00	0.00	0.00	5.19
815	816	2.598394	GCTGCACCTTCAAGCCCA	60.598	61.111	0.00	0.00	0.00	5.36
816	817	2.633509	GCTGCACCTTCAAGCCCAG	61.634	63.158	0.00	0.00	0.00	4.45
817	818	1.975407	CTGCACCTTCAAGCCCAGG	60.975	63.158	0.00	0.00	36.10	4.45
818	819	3.376918	GCACCTTCAAGCCCAGGC	61.377	66.667	0.00	0.00	42.33	4.85
819	820	2.115910	CACCTTCAAGCCCAGGCA	59.884	61.111	12.03	0.00	44.88	4.75
820	821	2.116125	ACCTTCAAGCCCAGGCAC	59.884	61.111	12.03	0.00	44.88	5.01
821	822	3.058160	CCTTCAAGCCCAGGCACG	61.058	66.667	12.03	0.93	44.88	5.34
822	823	2.032528	CTTCAAGCCCAGGCACGA	59.967	61.111	12.03	3.61	44.88	4.35
823	824	2.281484	TTCAAGCCCAGGCACGAC	60.281	61.111	12.03	0.00	44.88	4.34
824	825	3.842925	TTCAAGCCCAGGCACGACC	62.843	63.158	12.03	0.00	44.88	4.79
838	839	4.849329	GACCTAGCGGGCGTGTCG	62.849	72.222	0.00	0.00	39.10	4.35
855	856	3.964875	GTGCCAGCCCACGTGTTG	61.965	66.667	15.65	9.64	0.00	3.33
858	859	3.964875	CCAGCCCACGTGTTGCAC	61.965	66.667	23.85	6.31	0.00	4.57
859	860	3.964875	CAGCCCACGTGTTGCACC	61.965	66.667	23.85	3.80	0.00	5.01
860	861	4.189580	AGCCCACGTGTTGCACCT	62.190	61.111	23.85	6.03	0.00	4.00
861	862	3.216292	GCCCACGTGTTGCACCTT	61.216	61.111	15.65	0.00	0.00	3.50
862	863	3.030652	CCCACGTGTTGCACCTTC	58.969	61.111	15.65	0.00	0.00	3.46
863	864	1.821759	CCCACGTGTTGCACCTTCA	60.822	57.895	15.65	0.00	0.00	3.02
864	865	1.380403	CCCACGTGTTGCACCTTCAA	61.380	55.000	15.65	0.00	0.00	2.69
865	866	0.029300	CCACGTGTTGCACCTTCAAG	59.971	55.000	15.65	0.00	0.00	3.02
866	867	0.592247	CACGTGTTGCACCTTCAAGC	60.592	55.000	7.58	0.00	0.00	4.01
867	868	1.008538	CGTGTTGCACCTTCAAGCC	60.009	57.895	0.00	0.00	0.00	4.35
868	869	1.363807	GTGTTGCACCTTCAAGCCC	59.636	57.895	0.00	0.00	0.00	5.19
869	870	1.076412	TGTTGCACCTTCAAGCCCA	60.076	52.632	0.00	0.00	0.00	5.36
870	871	1.108727	TGTTGCACCTTCAAGCCCAG	61.109	55.000	0.00	0.00	0.00	4.45
871	872	1.531365	TTGCACCTTCAAGCCCAGG	60.531	57.895	0.00	0.00	36.10	4.45
872	873	3.376918	GCACCTTCAAGCCCAGGC	61.377	66.667	0.00	0.00	42.33	4.85
873	874	2.115910	CACCTTCAAGCCCAGGCA	59.884	61.111	12.03	0.00	44.88	4.75
874	875	2.116125	ACCTTCAAGCCCAGGCAC	59.884	61.111	12.03	0.00	44.88	5.01
875	876	3.058160	CCTTCAAGCCCAGGCACG	61.058	66.667	12.03	0.93	44.88	5.34
876	877	2.032528	CTTCAAGCCCAGGCACGA	59.967	61.111	12.03	3.61	44.88	4.35
877	878	2.281484	TTCAAGCCCAGGCACGAC	60.281	61.111	12.03	0.00	44.88	4.34
878	879	3.842925	TTCAAGCCCAGGCACGACC	62.843	63.158	12.03	0.00	44.88	4.79
891	892	3.174375	GGCACGACCTAGTTAGTAAACG	58.826	50.000	0.00	0.00	36.66	3.60
892	893	3.174375	GCACGACCTAGTTAGTAAACGG	58.826	50.000	0.00	0.00	40.73	4.44
893	894	3.762779	CACGACCTAGTTAGTAAACGGG	58.237	50.000	0.00	0.00	40.73	5.28
894	895	2.164422	ACGACCTAGTTAGTAAACGGGC	59.836	50.000	0.00	0.00	40.73	6.13
895	896	2.424956	CGACCTAGTTAGTAAACGGGCT	59.575	50.000	0.00	0.00	40.73	5.19
896	897	3.733077	CGACCTAGTTAGTAAACGGGCTG	60.733	52.174	0.00	0.00	40.73	4.85
897	898	3.434309	ACCTAGTTAGTAAACGGGCTGA	58.566	45.455	0.00	0.00	40.73	4.26
898	899	3.194329	ACCTAGTTAGTAAACGGGCTGAC	59.806	47.826	0.00	0.00	40.73	3.51
899	900	3.194116	CCTAGTTAGTAAACGGGCTGACA	59.806	47.826	0.00	0.00	40.73	3.58
900	901	3.036075	AGTTAGTAAACGGGCTGACAC	57.964	47.619	0.00	0.00	40.73	3.67
901	902	1.723003	GTTAGTAAACGGGCTGACACG	59.277	52.381	0.00	0.00	0.00	4.49
902	903	0.388907	TAGTAAACGGGCTGACACGC	60.389	55.000	0.00	0.00	0.00	5.34
903	904	1.666872	GTAAACGGGCTGACACGCT	60.667	57.895	0.00	0.00	0.00	5.07
904	905	1.666553	TAAACGGGCTGACACGCTG	60.667	57.895	0.00	0.00	0.00	5.18
905	906	4.988598	AACGGGCTGACACGCTGG	62.989	66.667	0.00	0.00	0.00	4.85
911	912	4.994471	CTGACACGCTGGGCTGCA	62.994	66.667	0.50	0.00	0.00	4.41
914	915	4.648626	ACACGCTGGGCTGCACAT	62.649	61.111	4.43	0.00	0.00	3.21
915	916	3.367743	CACGCTGGGCTGCACATT	61.368	61.111	4.43	0.00	0.00	2.71
916	917	2.598394	ACGCTGGGCTGCACATTT	60.598	55.556	4.43	0.00	0.00	2.32
917	918	2.202395	ACGCTGGGCTGCACATTTT	61.202	52.632	4.43	0.00	0.00	1.82
918	919	1.444895	CGCTGGGCTGCACATTTTC	60.445	57.895	4.43	0.00	0.00	2.29
919	920	1.667151	GCTGGGCTGCACATTTTCA	59.333	52.632	4.43	0.00	0.00	2.69
920	921	0.033781	GCTGGGCTGCACATTTTCAA	59.966	50.000	4.43	0.00	0.00	2.69
921	922	1.338389	GCTGGGCTGCACATTTTCAAT	60.338	47.619	4.43	0.00	0.00	2.57
922	923	2.613691	CTGGGCTGCACATTTTCAATC	58.386	47.619	4.43	0.00	0.00	2.67
923	924	2.232941	CTGGGCTGCACATTTTCAATCT	59.767	45.455	4.43	0.00	0.00	2.40
924	925	2.028839	TGGGCTGCACATTTTCAATCTG	60.029	45.455	0.00	0.00	0.00	2.90
925	926	2.028748	GGGCTGCACATTTTCAATCTGT	60.029	45.455	0.50	0.00	0.00	3.41
926	927	3.555586	GGGCTGCACATTTTCAATCTGTT	60.556	43.478	0.50	0.00	0.00	3.16
927	928	3.430895	GGCTGCACATTTTCAATCTGTTG	59.569	43.478	0.50	0.00	36.65	3.33
928	929	3.430895	GCTGCACATTTTCAATCTGTTGG	59.569	43.478	0.00	0.00	35.99	3.77
929	930	3.991773	CTGCACATTTTCAATCTGTTGGG	59.008	43.478	0.00	0.00	35.99	4.12
930	931	2.738314	GCACATTTTCAATCTGTTGGGC	59.262	45.455	0.00	0.00	35.99	5.36
931	932	3.555586	GCACATTTTCAATCTGTTGGGCT	60.556	43.478	0.00	0.00	35.99	5.19
932	933	3.991773	CACATTTTCAATCTGTTGGGCTG	59.008	43.478	0.00	0.00	35.99	4.85
933	934	3.896888	ACATTTTCAATCTGTTGGGCTGA	59.103	39.130	0.00	0.00	35.99	4.26
934	935	4.529377	ACATTTTCAATCTGTTGGGCTGAT	59.471	37.500	0.00	0.00	37.36	2.90
935	936	5.012354	ACATTTTCAATCTGTTGGGCTGATT	59.988	36.000	0.00	0.00	43.55	2.57
936	937	5.549742	TTTTCAATCTGTTGGGCTGATTT	57.450	34.783	0.00	0.00	41.72	2.17
937	938	5.549742	TTTCAATCTGTTGGGCTGATTTT	57.450	34.783	0.00	0.00	41.72	1.82
938	939	5.549742	TTCAATCTGTTGGGCTGATTTTT	57.450	34.783	0.00	0.00	41.72	1.94
939	940	6.662865	TTCAATCTGTTGGGCTGATTTTTA	57.337	33.333	0.00	0.00	41.72	1.52
940	941	6.271488	TCAATCTGTTGGGCTGATTTTTAG	57.729	37.500	0.00	0.00	41.72	1.85
941	942	5.185635	TCAATCTGTTGGGCTGATTTTTAGG	59.814	40.000	0.00	0.00	41.72	2.69
942	943	2.825532	TCTGTTGGGCTGATTTTTAGGC	59.174	45.455	0.00	0.00	39.76	3.93
951	952	6.561737	GGCTGATTTTTAGGCCTATTAGAC	57.438	41.667	14.74	4.03	41.20	2.59
952	953	5.473846	GGCTGATTTTTAGGCCTATTAGACC	59.526	44.000	14.74	7.80	41.20	3.85
953	954	6.062095	GCTGATTTTTAGGCCTATTAGACCA	58.938	40.000	14.74	7.15	0.00	4.02
954	955	6.717084	GCTGATTTTTAGGCCTATTAGACCAT	59.283	38.462	14.74	0.00	0.00	3.55
955	956	7.883311	GCTGATTTTTAGGCCTATTAGACCATA	59.117	37.037	14.74	0.00	0.00	2.74
956	957	9.965902	CTGATTTTTAGGCCTATTAGACCATAT	57.034	33.333	14.74	0.00	0.00	1.78
996	997	9.832445	AATACTCACTTTGTTCTTTGTTCTAGA	57.168	29.630	0.00	0.00	0.00	2.43
999	1000	9.262358	ACTCACTTTGTTCTTTGTTCTAGATAC	57.738	33.333	0.00	0.00	0.00	2.24
1000	1001	9.261180	CTCACTTTGTTCTTTGTTCTAGATACA	57.739	33.333	0.00	0.00	0.00	2.29
1001	1002	9.778741	TCACTTTGTTCTTTGTTCTAGATACAT	57.221	29.630	0.00	0.00	0.00	2.29
1003	1004	9.220767	ACTTTGTTCTTTGTTCTAGATACATCC	57.779	33.333	0.00	0.00	0.00	3.51
1004	1005	9.442047	CTTTGTTCTTTGTTCTAGATACATCCT	57.558	33.333	0.00	0.00	0.00	3.24
1005	1006	9.793259	TTTGTTCTTTGTTCTAGATACATCCTT	57.207	29.630	0.00	0.00	0.00	3.36
1006	1007	9.793259	TTGTTCTTTGTTCTAGATACATCCTTT	57.207	29.630	0.00	0.00	0.00	3.11
1007	1008	9.793259	TGTTCTTTGTTCTAGATACATCCTTTT	57.207	29.630	0.00	0.00	0.00	2.27
1027	1028	9.075678	TCCTTTTTATCCATTTTTACGTTACCA	57.924	29.630	0.00	0.00	0.00	3.25
1028	1029	9.349145	CCTTTTTATCCATTTTTACGTTACCAG	57.651	33.333	0.00	0.00	0.00	4.00
1032	1033	6.753107	ATCCATTTTTACGTTACCAGAAGG	57.247	37.500	0.00	0.00	42.21	3.46
1033	1034	5.005094	TCCATTTTTACGTTACCAGAAGGG	58.995	41.667	0.00	0.00	44.81	3.95
1034	1035	4.380128	CCATTTTTACGTTACCAGAAGGGC	60.380	45.833	0.00	0.00	42.05	5.19
1035	1036	2.477845	TTTACGTTACCAGAAGGGCC	57.522	50.000	0.00	0.00	42.05	5.80
1036	1037	1.350071	TTACGTTACCAGAAGGGCCA	58.650	50.000	6.18	0.00	42.05	5.36
1037	1038	1.575419	TACGTTACCAGAAGGGCCAT	58.425	50.000	6.18	0.00	42.05	4.40
1038	1039	0.035439	ACGTTACCAGAAGGGCCATG	60.035	55.000	6.18	0.68	42.05	3.66
1039	1040	1.376609	CGTTACCAGAAGGGCCATGC	61.377	60.000	6.18	0.00	42.05	4.06
1088	1089	3.784412	CGTTTAGCCCGTGCCGTG	61.784	66.667	0.00	0.00	38.69	4.94
1089	1090	4.097863	GTTTAGCCCGTGCCGTGC	62.098	66.667	0.00	0.00	38.69	5.34
1173	1174	1.608717	CCCCGTCTTCCTCCTCACTG	61.609	65.000	0.00	0.00	0.00	3.66
1550	1563	2.077627	GAAGAACTTCCCTTTCGCCTC	58.922	52.381	3.46	0.00	33.64	4.70
1658	1683	7.818930	TGCCAATTCCAAATTAGAAATTGAGAC	59.181	33.333	15.53	8.82	0.00	3.36
1686	1711	3.658757	TTTCCTGAATTCAAAAGCGGG	57.341	42.857	9.88	6.22	0.00	6.13
1708	1776	5.515886	GGGTGCCCTTATATGTAAATGCCTA	60.516	44.000	0.00	0.00	0.00	3.93
1734	1806	4.555262	GCCTGTCTATCTTCAGAGCATAC	58.445	47.826	0.00	0.00	34.02	2.39
2072	2220	5.455056	TTGGTGCCACGTTATATGTTTTT	57.545	34.783	0.00	0.00	0.00	1.94
2244	2402	3.202829	AGAAAGTTTGGTTACTCGGCA	57.797	42.857	0.00	0.00	0.00	5.69
2362	2529	5.080337	AGATATCATCAGCGGAAACCTAGA	58.920	41.667	5.32	0.00	0.00	2.43
2819	4136	2.912967	CGCAAGTGCAATCTTTAGCAAG	59.087	45.455	3.87	0.00	43.20	4.01
2975	4838	2.165998	GATTCTTGCCTTCCAGCACTT	58.834	47.619	0.00	0.00	43.97	3.16
2982	4845	1.676014	GCCTTCCAGCACTTATCACGT	60.676	52.381	0.00	0.00	0.00	4.49
3045	4908	2.742372	GCAGCGGTTGATGGACGT	60.742	61.111	0.00	0.00	30.37	4.34
3056	4919	2.734591	TGGACGTCCACTGCAGAC	59.265	61.111	33.23	7.70	42.01	3.51

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
3	4	2.171003	CCACACATTTCTTTCTCCCCC	58.829	52.381	0.00	0.00	0.00	5.40
4	5	3.084786	CTCCACACATTTCTTTCTCCCC	58.915	50.000	0.00	0.00	0.00	4.81
5	6	4.006319	CTCTCCACACATTTCTTTCTCCC	58.994	47.826	0.00	0.00	0.00	4.30
6	7	4.899502	TCTCTCCACACATTTCTTTCTCC	58.100	43.478	0.00	0.00	0.00	3.71
7	8	4.391523	GCTCTCTCCACACATTTCTTTCTC	59.608	45.833	0.00	0.00	0.00	2.87
8	9	4.041444	AGCTCTCTCCACACATTTCTTTCT	59.959	41.667	0.00	0.00	0.00	2.52
9	10	4.322567	AGCTCTCTCCACACATTTCTTTC	58.677	43.478	0.00	0.00	0.00	2.62
10	11	4.363991	AGCTCTCTCCACACATTTCTTT	57.636	40.909	0.00	0.00	0.00	2.52
11	12	4.619394	CGTAGCTCTCTCCACACATTTCTT	60.619	45.833	0.00	0.00	0.00	2.52
12	13	3.119316	CGTAGCTCTCTCCACACATTTCT	60.119	47.826	0.00	0.00	0.00	2.52
13	14	3.182967	CGTAGCTCTCTCCACACATTTC	58.817	50.000	0.00	0.00	0.00	2.17
14	15	2.563179	ACGTAGCTCTCTCCACACATTT	59.437	45.455	0.00	0.00	0.00	2.32
15	16	2.171840	ACGTAGCTCTCTCCACACATT	58.828	47.619	0.00	0.00	0.00	2.71
16	17	1.840737	ACGTAGCTCTCTCCACACAT	58.159	50.000	0.00	0.00	0.00	3.21
17	18	2.484742	TACGTAGCTCTCTCCACACA	57.515	50.000	0.00	0.00	0.00	3.72
18	19	3.008330	TCTTACGTAGCTCTCTCCACAC	58.992	50.000	0.00	0.00	0.00	3.82
19	20	3.271729	CTCTTACGTAGCTCTCTCCACA	58.728	50.000	0.00	0.00	0.00	4.17
20	21	2.614983	CCTCTTACGTAGCTCTCTCCAC	59.385	54.545	0.00	0.00	0.00	4.02
21	22	2.504585	TCCTCTTACGTAGCTCTCTCCA	59.495	50.000	0.00	0.00	0.00	3.86
22	23	3.196939	TCCTCTTACGTAGCTCTCTCC	57.803	52.381	0.00	0.00	0.00	3.71
23	24	6.225318	TCTTATCCTCTTACGTAGCTCTCTC	58.775	44.000	0.00	0.00	0.00	3.20
24	25	6.177310	TCTTATCCTCTTACGTAGCTCTCT	57.823	41.667	0.00	0.00	0.00	3.10
25	26	7.173562	TCAATCTTATCCTCTTACGTAGCTCTC	59.826	40.741	0.00	0.00	0.00	3.20
26	27	6.999272	TCAATCTTATCCTCTTACGTAGCTCT	59.001	38.462	0.00	0.00	0.00	4.09
27	28	7.204496	TCAATCTTATCCTCTTACGTAGCTC	57.796	40.000	0.00	0.00	0.00	4.09
28	29	6.207810	CCTCAATCTTATCCTCTTACGTAGCT	59.792	42.308	0.00	0.00	0.00	3.32
29	30	6.207025	TCCTCAATCTTATCCTCTTACGTAGC	59.793	42.308	0.00	0.00	0.00	3.58
30	31	7.574217	GCTCCTCAATCTTATCCTCTTACGTAG	60.574	44.444	0.00	0.00	0.00	3.51
31	32	6.207025	GCTCCTCAATCTTATCCTCTTACGTA	59.793	42.308	0.00	0.00	0.00	3.57
32	33	5.010213	GCTCCTCAATCTTATCCTCTTACGT	59.990	44.000	0.00	0.00	0.00	3.57
33	34	5.010112	TGCTCCTCAATCTTATCCTCTTACG	59.990	44.000	0.00	0.00	0.00	3.18
34	35	6.041523	ACTGCTCCTCAATCTTATCCTCTTAC	59.958	42.308	0.00	0.00	0.00	2.34
35	36	6.139671	ACTGCTCCTCAATCTTATCCTCTTA	58.860	40.000	0.00	0.00	0.00	2.10
36	37	4.968080	ACTGCTCCTCAATCTTATCCTCTT	59.032	41.667	0.00	0.00	0.00	2.85
37	38	4.555689	ACTGCTCCTCAATCTTATCCTCT	58.444	43.478	0.00	0.00	0.00	3.69
38	39	4.953940	ACTGCTCCTCAATCTTATCCTC	57.046	45.455	0.00	0.00	0.00	3.71
39	40	5.045286	ACAAACTGCTCCTCAATCTTATCCT	60.045	40.000	0.00	0.00	0.00	3.24
40	41	5.189180	ACAAACTGCTCCTCAATCTTATCC	58.811	41.667	0.00	0.00	0.00	2.59
41	42	6.150140	ACAACAAACTGCTCCTCAATCTTATC	59.850	38.462	0.00	0.00	0.00	1.75
42	43	6.006449	ACAACAAACTGCTCCTCAATCTTAT	58.994	36.000	0.00	0.00	0.00	1.73
43	44	5.239306	CACAACAAACTGCTCCTCAATCTTA	59.761	40.000	0.00	0.00	0.00	2.10
44	45	4.037208	CACAACAAACTGCTCCTCAATCTT	59.963	41.667	0.00	0.00	0.00	2.40
45	46	3.567164	CACAACAAACTGCTCCTCAATCT	59.433	43.478	0.00	0.00	0.00	2.40
46	47	3.316308	ACACAACAAACTGCTCCTCAATC	59.684	43.478	0.00	0.00	0.00	2.67
47	48	3.067180	CACACAACAAACTGCTCCTCAAT	59.933	43.478	0.00	0.00	0.00	2.57
48	49	2.423185	CACACAACAAACTGCTCCTCAA	59.577	45.455	0.00	0.00	0.00	3.02
49	50	2.016318	CACACAACAAACTGCTCCTCA	58.984	47.619	0.00	0.00	0.00	3.86
50	51	2.017049	ACACACAACAAACTGCTCCTC	58.983	47.619	0.00	0.00	0.00	3.71
51	52	1.745087	CACACACAACAAACTGCTCCT	59.255	47.619	0.00	0.00	0.00	3.69
52	53	1.202290	CCACACACAACAAACTGCTCC	60.202	52.381	0.00	0.00	0.00	4.70
53	54	1.202290	CCCACACACAACAAACTGCTC	60.202	52.381	0.00	0.00	0.00	4.26
54	55	0.817013	CCCACACACAACAAACTGCT	59.183	50.000	0.00	0.00	0.00	4.24
55	56	0.179113	CCCCACACACAACAAACTGC	60.179	55.000	0.00	0.00	0.00	4.40
56	57	0.459489	CCCCCACACACAACAAACTG	59.541	55.000	0.00	0.00	0.00	3.16
57	58	2.894858	CCCCCACACACAACAAACT	58.105	52.632	0.00	0.00	0.00	2.66
86	87	4.988598	CCTCCTTGCACGCCACGT	62.989	66.667	0.00	0.00	42.36	4.49
92	93	1.669760	TTAACCGCCTCCTTGCACG	60.670	57.895	0.00	0.00	0.00	5.34
93	94	1.873863	GTTAACCGCCTCCTTGCAC	59.126	57.895	0.00	0.00	0.00	4.57
94	95	1.669760	CGTTAACCGCCTCCTTGCA	60.670	57.895	0.00	0.00	0.00	4.08
95	96	2.396157	CCGTTAACCGCCTCCTTGC	61.396	63.158	0.00	0.00	34.38	4.01
96	97	1.743995	CCCGTTAACCGCCTCCTTG	60.744	63.158	0.00	0.00	34.38	3.61
97	98	2.666812	CCCGTTAACCGCCTCCTT	59.333	61.111	0.00	0.00	34.38	3.36
98	99	3.396570	CCCCGTTAACCGCCTCCT	61.397	66.667	0.00	0.00	34.38	3.69
99	100	3.381333	CTCCCCGTTAACCGCCTCC	62.381	68.421	0.00	0.00	34.38	4.30
100	101	1.891722	TTCTCCCCGTTAACCGCCTC	61.892	60.000	0.00	0.00	34.38	4.70
101	102	1.482748	TTTCTCCCCGTTAACCGCCT	61.483	55.000	0.00	0.00	34.38	5.52
102	103	0.606130	TTTTCTCCCCGTTAACCGCC	60.606	55.000	0.00	0.00	34.38	6.13
103	104	0.800631	CTTTTCTCCCCGTTAACCGC	59.199	55.000	0.00	0.00	34.38	5.68
104	105	2.460757	TCTTTTCTCCCCGTTAACCG	57.539	50.000	0.00	0.00	0.00	4.44
105	106	3.688185	GTGATCTTTTCTCCCCGTTAACC	59.312	47.826	0.00	0.00	0.00	2.85
106	107	4.576879	AGTGATCTTTTCTCCCCGTTAAC	58.423	43.478	0.00	0.00	0.00	2.01
107	108	4.619863	CGAGTGATCTTTTCTCCCCGTTAA	60.620	45.833	0.00	0.00	0.00	2.01
108	109	3.119245	CGAGTGATCTTTTCTCCCCGTTA	60.119	47.826	0.00	0.00	0.00	3.18
109	110	2.353803	CGAGTGATCTTTTCTCCCCGTT	60.354	50.000	0.00	0.00	0.00	4.44
110	111	1.204941	CGAGTGATCTTTTCTCCCCGT	59.795	52.381	0.00	0.00	0.00	5.28
111	112	1.476891	TCGAGTGATCTTTTCTCCCCG	59.523	52.381	0.00	0.00	0.00	5.73
112	113	2.498078	ACTCGAGTGATCTTTTCTCCCC	59.502	50.000	19.30	0.00	0.00	4.81
113	114	3.878160	ACTCGAGTGATCTTTTCTCCC	57.122	47.619	19.30	0.00	0.00	4.30
126	127	5.064834	GGAAAACTCTTGAAAACACTCGAGT	59.935	40.000	13.58	13.58	33.54	4.18
127	128	5.064707	TGGAAAACTCTTGAAAACACTCGAG	59.935	40.000	11.84	11.84	0.00	4.04
128	129	4.938832	TGGAAAACTCTTGAAAACACTCGA	59.061	37.500	0.00	0.00	0.00	4.04
129	130	5.229921	TGGAAAACTCTTGAAAACACTCG	57.770	39.130	0.00	0.00	0.00	4.18
130	131	9.581099	TTTATTGGAAAACTCTTGAAAACACTC	57.419	29.630	0.00	0.00	0.00	3.51
133	134	8.825745	GCATTTATTGGAAAACTCTTGAAAACA	58.174	29.630	0.00	0.00	0.00	2.83
134	135	9.045223	AGCATTTATTGGAAAACTCTTGAAAAC	57.955	29.630	0.00	0.00	0.00	2.43
135	136	9.044150	CAGCATTTATTGGAAAACTCTTGAAAA	57.956	29.630	0.00	0.00	0.00	2.29
136	137	8.420222	TCAGCATTTATTGGAAAACTCTTGAAA	58.580	29.630	0.00	0.00	0.00	2.69
137	138	7.867403	GTCAGCATTTATTGGAAAACTCTTGAA	59.133	33.333	0.00	0.00	0.00	2.69
138	139	7.370383	GTCAGCATTTATTGGAAAACTCTTGA	58.630	34.615	0.00	0.00	0.00	3.02
139	140	6.587608	GGTCAGCATTTATTGGAAAACTCTTG	59.412	38.462	0.00	0.00	0.00	3.02
140	141	6.494835	AGGTCAGCATTTATTGGAAAACTCTT	59.505	34.615	0.00	0.00	0.00	2.85
141	142	6.012745	AGGTCAGCATTTATTGGAAAACTCT	58.987	36.000	0.00	0.00	0.00	3.24
142	143	6.272822	AGGTCAGCATTTATTGGAAAACTC	57.727	37.500	0.00	0.00	0.00	3.01
143	144	6.378280	CCTAGGTCAGCATTTATTGGAAAACT	59.622	38.462	0.00	0.00	0.00	2.66
144	145	6.564328	CCTAGGTCAGCATTTATTGGAAAAC	58.436	40.000	0.00	0.00	0.00	2.43
145	146	5.127031	GCCTAGGTCAGCATTTATTGGAAAA	59.873	40.000	11.31	0.00	0.00	2.29
146	147	4.644685	GCCTAGGTCAGCATTTATTGGAAA	59.355	41.667	11.31	0.00	0.00	3.13
147	148	4.207165	GCCTAGGTCAGCATTTATTGGAA	58.793	43.478	11.31	0.00	0.00	3.53
148	149	3.435026	GGCCTAGGTCAGCATTTATTGGA	60.435	47.826	9.01	0.00	0.00	3.53
149	150	2.887152	GGCCTAGGTCAGCATTTATTGG	59.113	50.000	9.01	0.00	0.00	3.16
150	151	2.549754	CGGCCTAGGTCAGCATTTATTG	59.450	50.000	15.12	0.00	0.00	1.90
151	152	2.851195	CGGCCTAGGTCAGCATTTATT	58.149	47.619	15.12	0.00	0.00	1.40
152	153	1.543429	GCGGCCTAGGTCAGCATTTAT	60.543	52.381	20.50	0.00	0.00	1.40
153	154	0.179056	GCGGCCTAGGTCAGCATTTA	60.179	55.000	20.50	0.00	0.00	1.40
154	155	1.452108	GCGGCCTAGGTCAGCATTT	60.452	57.895	20.50	0.00	0.00	2.32
155	156	2.190578	GCGGCCTAGGTCAGCATT	59.809	61.111	20.50	0.00	0.00	3.56
156	157	3.083349	TGCGGCCTAGGTCAGCAT	61.083	61.111	23.08	0.00	32.43	3.79
157	158	3.774528	CTGCGGCCTAGGTCAGCA	61.775	66.667	24.53	24.53	36.34	4.41
158	159	3.724914	GACTGCGGCCTAGGTCAGC	62.725	68.421	15.12	17.54	0.00	4.26
159	160	2.351244	TGACTGCGGCCTAGGTCAG	61.351	63.158	15.12	17.89	34.38	3.51
160	161	2.283604	TGACTGCGGCCTAGGTCA	60.284	61.111	15.12	14.57	36.52	4.02
161	162	2.184579	GTGACTGCGGCCTAGGTC	59.815	66.667	11.31	7.06	0.00	3.85
162	163	2.603473	TGTGACTGCGGCCTAGGT	60.603	61.111	11.31	0.00	0.00	3.08
163	164	2.125512	GTGTGACTGCGGCCTAGG	60.126	66.667	3.67	3.67	0.00	3.02
164	165	1.153745	GAGTGTGACTGCGGCCTAG	60.154	63.158	0.00	1.07	0.00	3.02
165	166	1.906333	TGAGTGTGACTGCGGCCTA	60.906	57.895	0.00	0.00	0.00	3.93
166	167	3.233980	TGAGTGTGACTGCGGCCT	61.234	61.111	0.00	0.00	0.00	5.19
167	168	3.044305	GTGAGTGTGACTGCGGCC	61.044	66.667	0.00	0.00	0.00	6.13
168	169	2.280119	TGTGAGTGTGACTGCGGC	60.280	61.111	0.00	0.00	0.00	6.53
169	170	1.956170	GGTGTGAGTGTGACTGCGG	60.956	63.158	0.00	0.00	0.00	5.69
170	171	2.302952	CGGTGTGAGTGTGACTGCG	61.303	63.158	0.00	0.00	0.00	5.18
171	172	0.031585	TACGGTGTGAGTGTGACTGC	59.968	55.000	0.00	0.00	0.00	4.40
172	173	2.394708	CTTACGGTGTGAGTGTGACTG	58.605	52.381	0.00	0.00	0.00	3.51
173	174	1.340248	CCTTACGGTGTGAGTGTGACT	59.660	52.381	0.00	0.00	0.00	3.41
174	175	1.338973	TCCTTACGGTGTGAGTGTGAC	59.661	52.381	0.00	0.00	0.00	3.67
175	176	1.338973	GTCCTTACGGTGTGAGTGTGA	59.661	52.381	0.00	0.00	0.00	3.58
176	177	1.604693	GGTCCTTACGGTGTGAGTGTG	60.605	57.143	0.00	0.00	0.00	3.82
177	178	0.677842	GGTCCTTACGGTGTGAGTGT	59.322	55.000	0.00	0.00	0.00	3.55
178	179	0.037605	GGGTCCTTACGGTGTGAGTG	60.038	60.000	0.00	0.00	0.00	3.51
179	180	1.530013	CGGGTCCTTACGGTGTGAGT	61.530	60.000	0.00	0.00	0.00	3.41
180	181	1.214589	CGGGTCCTTACGGTGTGAG	59.785	63.158	0.00	0.00	0.00	3.51
181	182	1.114722	AACGGGTCCTTACGGTGTGA	61.115	55.000	0.00	0.00	0.00	3.58
182	183	0.249996	AAACGGGTCCTTACGGTGTG	60.250	55.000	0.00	0.00	0.00	3.82
183	184	0.249996	CAAACGGGTCCTTACGGTGT	60.250	55.000	0.00	0.00	0.00	4.16
184	185	0.952010	CCAAACGGGTCCTTACGGTG	60.952	60.000	0.00	0.00	0.00	4.94
185	186	1.372307	CCAAACGGGTCCTTACGGT	59.628	57.895	0.00	0.00	0.00	4.83
186	187	1.376295	CCCAAACGGGTCCTTACGG	60.376	63.158	0.00	0.00	39.13	4.02
187	188	0.671472	GTCCCAAACGGGTCCTTACG	60.671	60.000	0.00	0.00	45.04	3.18
188	189	0.321919	GGTCCCAAACGGGTCCTTAC	60.322	60.000	6.56	0.00	45.69	2.34
189	190	2.068915	GGTCCCAAACGGGTCCTTA	58.931	57.895	6.56	0.00	45.69	2.69
190	191	2.841317	GGTCCCAAACGGGTCCTT	59.159	61.111	6.56	0.00	45.69	3.36
193	194	2.516909	TTGGGTCCCAAACGGGTC	59.483	61.111	21.74	0.00	45.04	4.46
201	202	1.710816	GTTTGGTTGATTGGGTCCCA	58.289	50.000	6.47	6.47	0.00	4.37
202	203	0.973632	GGTTTGGTTGATTGGGTCCC	59.026	55.000	0.00	0.00	0.00	4.46
203	204	1.618343	CAGGTTTGGTTGATTGGGTCC	59.382	52.381	0.00	0.00	0.00	4.46
204	205	1.618343	CCAGGTTTGGTTGATTGGGTC	59.382	52.381	0.00	0.00	39.79	4.46
205	206	1.715785	CCAGGTTTGGTTGATTGGGT	58.284	50.000	0.00	0.00	39.79	4.51
206	207	0.321346	GCCAGGTTTGGTTGATTGGG	59.679	55.000	0.00	0.00	46.80	4.12
207	208	0.321346	GGCCAGGTTTGGTTGATTGG	59.679	55.000	0.00	0.00	46.80	3.16
208	209	1.047002	TGGCCAGGTTTGGTTGATTG	58.953	50.000	0.00	0.00	46.80	2.67
209	210	1.799933	TTGGCCAGGTTTGGTTGATT	58.200	45.000	5.11	0.00	46.80	2.57
210	211	1.416030	GTTTGGCCAGGTTTGGTTGAT	59.584	47.619	5.11	0.00	46.80	2.57
211	212	0.827368	GTTTGGCCAGGTTTGGTTGA	59.173	50.000	5.11	0.00	46.80	3.18
212	213	0.529555	CGTTTGGCCAGGTTTGGTTG	60.530	55.000	5.11	0.00	46.80	3.77
213	214	1.681486	CCGTTTGGCCAGGTTTGGTT	61.681	55.000	5.11	0.00	46.80	3.67
214	215	2.131067	CCGTTTGGCCAGGTTTGGT	61.131	57.895	5.11	0.00	46.80	3.67
216	217	2.733945	CCCGTTTGGCCAGGTTTG	59.266	61.111	5.11	0.00	0.00	2.93
244	245	3.768833	ATAGGTCGGGTCGGGCCAT	62.769	63.158	4.39	0.00	39.65	4.40
245	246	4.468769	ATAGGTCGGGTCGGGCCA	62.469	66.667	4.39	0.00	39.65	5.36
246	247	3.925090	CATAGGTCGGGTCGGGCC	61.925	72.222	0.00	0.00	0.00	5.80
247	248	4.603946	GCATAGGTCGGGTCGGGC	62.604	72.222	0.00	0.00	0.00	6.13
248	249	0.898789	ATAGCATAGGTCGGGTCGGG	60.899	60.000	0.00	0.00	0.00	5.14
249	250	1.743958	CTATAGCATAGGTCGGGTCGG	59.256	57.143	0.00	0.00	0.00	4.79
250	251	2.434428	ACTATAGCATAGGTCGGGTCG	58.566	52.381	0.00	0.00	0.00	4.79
251	252	3.056749	CCAACTATAGCATAGGTCGGGTC	60.057	52.174	0.00	0.00	0.00	4.46
252	253	2.897969	CCAACTATAGCATAGGTCGGGT	59.102	50.000	0.00	0.00	0.00	5.28
253	254	2.353803	GCCAACTATAGCATAGGTCGGG	60.354	54.545	0.00	2.42	0.00	5.14
254	255	2.353803	GGCCAACTATAGCATAGGTCGG	60.354	54.545	0.00	6.68	0.00	4.79
255	256	2.299013	TGGCCAACTATAGCATAGGTCG	59.701	50.000	0.61	0.00	0.00	4.79
256	257	4.351874	TTGGCCAACTATAGCATAGGTC	57.648	45.455	16.05	0.00	0.00	3.85
257	258	4.788925	TTTGGCCAACTATAGCATAGGT	57.211	40.909	20.35	0.00	0.00	3.08
258	259	4.460382	CCATTTGGCCAACTATAGCATAGG	59.540	45.833	20.35	3.84	0.00	2.57
259	260	4.460382	CCCATTTGGCCAACTATAGCATAG	59.540	45.833	20.35	0.00	0.00	2.23
260	261	4.406456	CCCATTTGGCCAACTATAGCATA	58.594	43.478	20.35	0.00	0.00	3.14
261	262	3.233507	CCCATTTGGCCAACTATAGCAT	58.766	45.455	20.35	3.89	0.00	3.79
262	263	2.665165	CCCATTTGGCCAACTATAGCA	58.335	47.619	20.35	0.97	0.00	3.49
326	327	2.436646	GTCGTGTCTGGCCCATGG	60.437	66.667	4.14	4.14	0.00	3.66
327	328	1.300971	CTTGTCGTGTCTGGCCCATG	61.301	60.000	0.00	0.00	0.00	3.66
328	329	1.003355	CTTGTCGTGTCTGGCCCAT	60.003	57.895	0.00	0.00	0.00	4.00
329	330	2.425592	CTTGTCGTGTCTGGCCCA	59.574	61.111	0.00	0.00	0.00	5.36
330	331	2.358737	CCTTGTCGTGTCTGGCCC	60.359	66.667	0.00	0.00	0.00	5.80
331	332	2.358737	CCCTTGTCGTGTCTGGCC	60.359	66.667	0.00	0.00	0.00	5.36
332	333	2.167398	TAGCCCTTGTCGTGTCTGGC	62.167	60.000	0.00	0.00	39.17	4.85
333	334	0.320374	TTAGCCCTTGTCGTGTCTGG	59.680	55.000	0.00	0.00	0.00	3.86
334	335	1.798813	GTTTAGCCCTTGTCGTGTCTG	59.201	52.381	0.00	0.00	0.00	3.51
335	336	1.604693	CGTTTAGCCCTTGTCGTGTCT	60.605	52.381	0.00	0.00	0.00	3.41
336	337	0.788391	CGTTTAGCCCTTGTCGTGTC	59.212	55.000	0.00	0.00	0.00	3.67
337	338	0.601841	CCGTTTAGCCCTTGTCGTGT	60.602	55.000	0.00	0.00	0.00	4.49
338	339	1.296056	CCCGTTTAGCCCTTGTCGTG	61.296	60.000	0.00	0.00	0.00	4.35
339	340	1.004200	CCCGTTTAGCCCTTGTCGT	60.004	57.895	0.00	0.00	0.00	4.34
340	341	2.396157	GCCCGTTTAGCCCTTGTCG	61.396	63.158	0.00	0.00	0.00	4.35
341	342	2.044555	GGCCCGTTTAGCCCTTGTC	61.045	63.158	0.00	0.00	45.16	3.18
342	343	2.035155	GGCCCGTTTAGCCCTTGT	59.965	61.111	0.00	0.00	45.16	3.16
375	376	2.563798	AAACACGGCCCAGTGCATG	61.564	57.895	10.38	0.00	45.45	4.06
376	377	2.203480	AAACACGGCCCAGTGCAT	60.203	55.556	10.38	0.00	45.45	3.96
377	378	3.215568	CAAACACGGCCCAGTGCA	61.216	61.111	10.38	0.00	45.45	4.57
378	379	3.977244	CCAAACACGGCCCAGTGC	61.977	66.667	10.38	0.00	45.45	4.40
379	380	3.294493	CCCAAACACGGCCCAGTG	61.294	66.667	9.03	9.03	46.83	3.66
380	381	4.596585	CCCCAAACACGGCCCAGT	62.597	66.667	0.00	0.00	0.00	4.00
381	382	4.596585	ACCCCAAACACGGCCCAG	62.597	66.667	0.00	0.00	0.00	4.45
382	383	4.904590	CACCCCAAACACGGCCCA	62.905	66.667	0.00	0.00	0.00	5.36
384	385	3.853698	TAGCACCCCAAACACGGCC	62.854	63.158	0.00	0.00	0.00	6.13
385	386	2.281900	TAGCACCCCAAACACGGC	60.282	61.111	0.00	0.00	0.00	5.68
386	387	1.674322	CCTAGCACCCCAAACACGG	60.674	63.158	0.00	0.00	0.00	4.94
387	388	2.332654	GCCTAGCACCCCAAACACG	61.333	63.158	0.00	0.00	0.00	4.49
388	389	1.074951	AGCCTAGCACCCCAAACAC	59.925	57.895	0.00	0.00	0.00	3.32
389	390	1.074775	CAGCCTAGCACCCCAAACA	59.925	57.895	0.00	0.00	0.00	2.83
390	391	0.678048	CTCAGCCTAGCACCCCAAAC	60.678	60.000	0.00	0.00	0.00	2.93
391	392	1.685224	CTCAGCCTAGCACCCCAAA	59.315	57.895	0.00	0.00	0.00	3.28
392	393	2.971598	GCTCAGCCTAGCACCCCAA	61.972	63.158	3.11	0.00	42.30	4.12
393	394	3.402681	GCTCAGCCTAGCACCCCA	61.403	66.667	3.11	0.00	42.30	4.96
400	401	4.880537	CCCGCGTGCTCAGCCTAG	62.881	72.222	4.92	0.00	0.00	3.02
422	423	3.993614	TTAGGCGGGCCATGCTGTG	62.994	63.158	17.54	0.00	38.92	3.66
423	424	2.572333	AATTAGGCGGGCCATGCTGT	62.572	55.000	17.54	8.96	38.92	4.40
424	425	0.537143	TAATTAGGCGGGCCATGCTG	60.537	55.000	17.54	0.00	38.92	4.41
425	426	0.405585	ATAATTAGGCGGGCCATGCT	59.594	50.000	17.54	7.56	38.92	3.79
426	427	0.811281	GATAATTAGGCGGGCCATGC	59.189	55.000	12.97	8.08	38.92	4.06
427	428	2.496899	AGATAATTAGGCGGGCCATG	57.503	50.000	12.97	0.00	38.92	3.66
428	429	3.525800	AAAGATAATTAGGCGGGCCAT	57.474	42.857	12.97	0.00	38.92	4.40
429	430	3.306472	AAAAGATAATTAGGCGGGCCA	57.694	42.857	12.97	0.00	38.92	5.36
459	460	9.674705	ACATGTTGGGCCATATAGAGATATATA	57.325	33.333	7.26	0.00	0.00	0.86
460	461	8.572884	ACATGTTGGGCCATATAGAGATATAT	57.427	34.615	7.26	0.00	0.00	0.86
461	462	7.995052	ACATGTTGGGCCATATAGAGATATA	57.005	36.000	7.26	0.00	0.00	0.86
462	463	6.898171	ACATGTTGGGCCATATAGAGATAT	57.102	37.500	7.26	0.00	0.00	1.63
463	464	7.806680	TTACATGTTGGGCCATATAGAGATA	57.193	36.000	7.26	0.00	0.00	1.98
464	465	6.702449	TTACATGTTGGGCCATATAGAGAT	57.298	37.500	7.26	0.00	0.00	2.75
465	466	6.508030	TTTACATGTTGGGCCATATAGAGA	57.492	37.500	7.26	0.00	0.00	3.10
466	467	7.581213	TTTTTACATGTTGGGCCATATAGAG	57.419	36.000	7.26	0.00	0.00	2.43
467	468	9.295825	CTATTTTTACATGTTGGGCCATATAGA	57.704	33.333	7.26	0.00	0.00	1.98
468	469	9.295825	TCTATTTTTACATGTTGGGCCATATAG	57.704	33.333	7.26	0.40	0.00	1.31
469	470	9.073475	GTCTATTTTTACATGTTGGGCCATATA	57.927	33.333	7.26	0.00	0.00	0.86
470	471	7.784550	AGTCTATTTTTACATGTTGGGCCATAT	59.215	33.333	7.26	1.89	0.00	1.78
471	472	7.122715	AGTCTATTTTTACATGTTGGGCCATA	58.877	34.615	7.26	0.00	0.00	2.74
472	473	5.957774	AGTCTATTTTTACATGTTGGGCCAT	59.042	36.000	7.26	0.00	0.00	4.40
473	474	5.329399	AGTCTATTTTTACATGTTGGGCCA	58.671	37.500	0.00	0.00	0.00	5.36
474	475	5.914898	AGTCTATTTTTACATGTTGGGCC	57.085	39.130	2.30	0.00	0.00	5.80
475	476	9.699703	TTTTTAGTCTATTTTTACATGTTGGGC	57.300	29.630	2.30	0.00	0.00	5.36
479	480	9.401873	GGCGTTTTTAGTCTATTTTTACATGTT	57.598	29.630	2.30	0.00	0.00	2.71
480	481	8.024865	GGGCGTTTTTAGTCTATTTTTACATGT	58.975	33.333	2.69	2.69	0.00	3.21
481	482	8.024285	TGGGCGTTTTTAGTCTATTTTTACATG	58.976	33.333	0.00	0.00	0.00	3.21
482	483	8.113173	TGGGCGTTTTTAGTCTATTTTTACAT	57.887	30.769	0.00	0.00	0.00	2.29
483	484	7.229106	ACTGGGCGTTTTTAGTCTATTTTTACA	59.771	33.333	0.00	0.00	0.00	2.41
484	485	7.536281	CACTGGGCGTTTTTAGTCTATTTTTAC	59.464	37.037	0.00	0.00	0.00	2.01
485	486	7.586747	CACTGGGCGTTTTTAGTCTATTTTTA	58.413	34.615	0.00	0.00	0.00	1.52
486	487	6.443792	CACTGGGCGTTTTTAGTCTATTTTT	58.556	36.000	0.00	0.00	0.00	1.94
487	488	5.564063	GCACTGGGCGTTTTTAGTCTATTTT	60.564	40.000	0.00	0.00	0.00	1.82
488	489	4.082949	GCACTGGGCGTTTTTAGTCTATTT	60.083	41.667	0.00	0.00	0.00	1.40
489	490	3.439129	GCACTGGGCGTTTTTAGTCTATT	59.561	43.478	0.00	0.00	0.00	1.73
490	491	3.007635	GCACTGGGCGTTTTTAGTCTAT	58.992	45.455	0.00	0.00	0.00	1.98
491	492	2.419667	GCACTGGGCGTTTTTAGTCTA	58.580	47.619	0.00	0.00	0.00	2.59
492	493	1.235724	GCACTGGGCGTTTTTAGTCT	58.764	50.000	0.00	0.00	0.00	3.24
493	494	3.767287	GCACTGGGCGTTTTTAGTC	57.233	52.632	0.00	0.00	0.00	2.59
503	504	1.517039	GCTATTTTGCGCACTGGGC	60.517	57.895	11.12	11.07	41.94	5.36
504	505	0.179156	CTGCTATTTTGCGCACTGGG	60.179	55.000	11.12	0.29	35.36	4.45
505	506	0.523072	ACTGCTATTTTGCGCACTGG	59.477	50.000	11.12	0.47	35.36	4.00
506	507	1.197492	TGACTGCTATTTTGCGCACTG	59.803	47.619	11.12	3.96	35.36	3.66
507	508	1.466167	CTGACTGCTATTTTGCGCACT	59.534	47.619	11.12	0.00	35.36	4.40
508	509	1.464608	TCTGACTGCTATTTTGCGCAC	59.535	47.619	11.12	0.00	35.36	5.34
509	510	1.464608	GTCTGACTGCTATTTTGCGCA	59.535	47.619	5.66	5.66	35.36	6.09
510	511	1.734465	AGTCTGACTGCTATTTTGCGC	59.266	47.619	10.00	0.00	35.36	6.09
511	512	3.000724	GCTAGTCTGACTGCTATTTTGCG	59.999	47.826	20.19	0.00	35.36	4.85
512	513	3.000724	CGCTAGTCTGACTGCTATTTTGC	59.999	47.826	20.19	9.68	0.00	3.68
513	514	4.032217	CACGCTAGTCTGACTGCTATTTTG	59.968	45.833	20.19	9.73	0.00	2.44
514	515	4.177026	CACGCTAGTCTGACTGCTATTTT	58.823	43.478	20.19	0.00	0.00	1.82
515	516	3.775202	CACGCTAGTCTGACTGCTATTT	58.225	45.455	20.19	4.34	0.00	1.40
516	517	2.480416	GCACGCTAGTCTGACTGCTATT	60.480	50.000	20.19	6.38	0.00	1.73
517	518	1.066303	GCACGCTAGTCTGACTGCTAT	59.934	52.381	20.19	9.46	0.00	2.97
518	519	0.452184	GCACGCTAGTCTGACTGCTA	59.548	55.000	20.19	0.00	0.00	3.49
519	520	1.214062	GCACGCTAGTCTGACTGCT	59.786	57.895	20.19	8.76	0.00	4.24
520	521	1.807573	GGCACGCTAGTCTGACTGC	60.808	63.158	20.19	18.25	0.00	4.40
521	522	0.457509	CAGGCACGCTAGTCTGACTG	60.458	60.000	20.19	9.49	0.00	3.51
522	523	1.599606	CCAGGCACGCTAGTCTGACT	61.600	60.000	15.57	15.57	0.00	3.41
523	524	1.153745	CCAGGCACGCTAGTCTGAC	60.154	63.158	8.26	0.00	0.00	3.51
524	525	3.006756	GCCAGGCACGCTAGTCTGA	62.007	63.158	6.55	0.00	0.00	3.27
525	526	2.510238	GCCAGGCACGCTAGTCTG	60.510	66.667	6.55	0.38	0.00	3.51
526	527	4.135153	CGCCAGGCACGCTAGTCT	62.135	66.667	13.30	0.00	0.00	3.24
527	528	4.436998	ACGCCAGGCACGCTAGTC	62.437	66.667	13.30	0.00	0.00	2.59
528	529	4.742201	CACGCCAGGCACGCTAGT	62.742	66.667	13.30	0.00	0.00	2.57
529	530	4.742201	ACACGCCAGGCACGCTAG	62.742	66.667	13.30	0.00	0.00	3.42
530	531	4.735132	GACACGCCAGGCACGCTA	62.735	66.667	13.30	0.00	0.00	4.26
552	553	2.592861	CTGCTAATCGGGCTGGCC	60.593	66.667	10.75	10.75	0.00	5.36
553	554	3.282920	GCTGCTAATCGGGCTGGC	61.283	66.667	0.00	0.00	0.00	4.85
554	555	2.592861	GGCTGCTAATCGGGCTGG	60.593	66.667	0.00	0.00	42.85	4.85
555	556	2.969238	CGGCTGCTAATCGGGCTG	60.969	66.667	0.00	0.00	43.89	4.85
556	557	4.241555	CCGGCTGCTAATCGGGCT	62.242	66.667	7.10	0.00	43.89	5.19
561	562	4.547367	ACGGCCCGGCTGCTAATC	62.547	66.667	18.81	0.00	38.71	1.75
562	563	4.856801	CACGGCCCGGCTGCTAAT	62.857	66.667	18.81	0.00	38.71	1.73
615	616	3.124636	CACGATTATTATACGGGCCTTGC	59.875	47.826	0.84	0.00	0.00	4.01
616	617	4.921470	CACGATTATTATACGGGCCTTG	57.079	45.455	0.84	0.00	0.00	3.61
621	622	4.679662	CCTAGGCACGATTATTATACGGG	58.320	47.826	0.00	0.00	0.00	5.28
622	623	4.110482	GCCTAGGCACGATTATTATACGG	58.890	47.826	29.33	0.00	41.49	4.02
623	624	3.789756	CGCCTAGGCACGATTATTATACG	59.210	47.826	32.47	7.82	42.06	3.06
624	625	4.110482	CCGCCTAGGCACGATTATTATAC	58.890	47.826	32.47	0.00	42.06	1.47
625	626	3.131577	CCCGCCTAGGCACGATTATTATA	59.868	47.826	32.47	0.00	42.06	0.98
626	627	2.093658	CCCGCCTAGGCACGATTATTAT	60.094	50.000	32.47	0.00	42.06	1.28
627	628	1.274167	CCCGCCTAGGCACGATTATTA	59.726	52.381	32.47	0.00	42.06	0.98
628	629	0.034896	CCCGCCTAGGCACGATTATT	59.965	55.000	32.47	0.00	42.06	1.40
629	630	1.671742	CCCGCCTAGGCACGATTAT	59.328	57.895	32.47	0.00	42.06	1.28
630	631	3.134879	CCCGCCTAGGCACGATTA	58.865	61.111	32.47	0.00	42.06	1.75
655	656	3.658351	GATTGTAATCGTGTCTGGCAC	57.342	47.619	1.45	1.45	44.36	5.01
666	667	2.258726	GGCCCGGCCGATTGTAATC	61.259	63.158	30.73	5.56	39.62	1.75
667	668	2.203294	GGCCCGGCCGATTGTAAT	60.203	61.111	30.73	0.00	39.62	1.89
692	693	4.362476	CAAACAAGCCGGCCCTGC	62.362	66.667	26.15	0.00	0.00	4.85
693	694	3.683937	CCAAACAAGCCGGCCCTG	61.684	66.667	26.15	23.36	0.00	4.45
697	698	4.404654	CTCGCCAAACAAGCCGGC	62.405	66.667	21.89	21.89	42.64	6.13
698	699	4.404654	GCTCGCCAAACAAGCCGG	62.405	66.667	0.00	0.00	0.00	6.13
699	700	1.369091	ATAGCTCGCCAAACAAGCCG	61.369	55.000	0.00	0.00	36.69	5.52
700	701	0.099436	CATAGCTCGCCAAACAAGCC	59.901	55.000	0.00	0.00	36.69	4.35
701	702	1.086696	TCATAGCTCGCCAAACAAGC	58.913	50.000	0.00	0.00	36.27	4.01
702	703	1.398390	GGTCATAGCTCGCCAAACAAG	59.602	52.381	0.00	0.00	0.00	3.16
703	704	1.003118	AGGTCATAGCTCGCCAAACAA	59.997	47.619	0.00	0.00	0.00	2.83
704	705	0.613260	AGGTCATAGCTCGCCAAACA	59.387	50.000	0.00	0.00	0.00	2.83
705	706	2.202566	GTAGGTCATAGCTCGCCAAAC	58.797	52.381	0.00	0.00	0.00	2.93
706	707	1.202371	CGTAGGTCATAGCTCGCCAAA	60.202	52.381	0.00	0.00	0.00	3.28
707	708	0.384309	CGTAGGTCATAGCTCGCCAA	59.616	55.000	0.00	0.00	0.00	4.52
708	709	2.030551	CGTAGGTCATAGCTCGCCA	58.969	57.895	0.00	0.00	0.00	5.69
709	710	1.371881	GCGTAGGTCATAGCTCGCC	60.372	63.158	0.00	0.00	36.78	5.54
710	711	0.873054	TAGCGTAGGTCATAGCTCGC	59.127	55.000	4.19	4.19	40.12	5.03
711	712	3.833545	ATTAGCGTAGGTCATAGCTCG	57.166	47.619	0.00	0.00	40.73	5.03
712	713	4.681942	CACAATTAGCGTAGGTCATAGCTC	59.318	45.833	0.00	0.00	40.73	4.09
713	714	4.621991	CACAATTAGCGTAGGTCATAGCT	58.378	43.478	0.00	0.00	43.07	3.32
714	715	3.184581	GCACAATTAGCGTAGGTCATAGC	59.815	47.826	0.00	0.00	40.68	2.97
715	716	3.741344	GGCACAATTAGCGTAGGTCATAG	59.259	47.826	0.00	0.00	40.68	2.23
716	717	3.133183	TGGCACAATTAGCGTAGGTCATA	59.867	43.478	0.00	0.00	34.90	2.15
717	718	2.093181	TGGCACAATTAGCGTAGGTCAT	60.093	45.455	0.00	0.00	34.90	3.06
718	719	1.276705	TGGCACAATTAGCGTAGGTCA	59.723	47.619	0.00	0.00	34.90	4.02
719	720	1.664151	GTGGCACAATTAGCGTAGGTC	59.336	52.381	13.86	0.00	44.16	3.85
720	721	1.734163	GTGGCACAATTAGCGTAGGT	58.266	50.000	13.86	0.00	44.16	3.08
721	722	0.650512	CGTGGCACAATTAGCGTAGG	59.349	55.000	19.09	0.00	44.16	3.18
722	723	0.026285	GCGTGGCACAATTAGCGTAG	59.974	55.000	19.09	0.00	44.16	3.51
723	724	0.670854	TGCGTGGCACAATTAGCGTA	60.671	50.000	19.09	0.00	44.16	4.42
724	725	1.963855	TGCGTGGCACAATTAGCGT	60.964	52.632	19.09	0.00	44.16	5.07
725	726	2.866750	TGCGTGGCACAATTAGCG	59.133	55.556	19.09	2.46	44.16	4.26
737	738	4.934942	TGGGTCGTGTCGTGCGTG	62.935	66.667	0.00	0.00	0.00	5.34
738	739	3.986006	ATGGGTCGTGTCGTGCGT	61.986	61.111	0.00	0.00	0.00	5.24
739	740	3.478394	CATGGGTCGTGTCGTGCG	61.478	66.667	0.00	0.00	0.00	5.34
740	741	2.048597	TCATGGGTCGTGTCGTGC	60.049	61.111	0.00	0.00	0.00	5.34
741	742	1.446099	CCTCATGGGTCGTGTCGTG	60.446	63.158	0.00	0.00	0.00	4.35
742	743	2.970639	CCTCATGGGTCGTGTCGT	59.029	61.111	0.00	0.00	0.00	4.34
754	755	3.206150	CGCTTAGTAAACATGCCCTCAT	58.794	45.455	0.00	0.00	0.00	2.90
755	756	2.627945	CGCTTAGTAAACATGCCCTCA	58.372	47.619	0.00	0.00	0.00	3.86
756	757	1.940613	CCGCTTAGTAAACATGCCCTC	59.059	52.381	0.00	0.00	0.00	4.30
757	758	1.408266	CCCGCTTAGTAAACATGCCCT	60.408	52.381	0.00	0.00	0.00	5.19
758	759	1.021968	CCCGCTTAGTAAACATGCCC	58.978	55.000	0.00	0.00	0.00	5.36
759	760	0.380733	GCCCGCTTAGTAAACATGCC	59.619	55.000	0.00	0.00	0.00	4.40
760	761	0.027586	CGCCCGCTTAGTAAACATGC	59.972	55.000	0.00	0.00	0.00	4.06
761	762	1.062002	CACGCCCGCTTAGTAAACATG	59.938	52.381	0.00	0.00	0.00	3.21
762	763	1.338389	ACACGCCCGCTTAGTAAACAT	60.338	47.619	0.00	0.00	0.00	2.71
763	764	0.033781	ACACGCCCGCTTAGTAAACA	59.966	50.000	0.00	0.00	0.00	2.83
764	765	0.717784	GACACGCCCGCTTAGTAAAC	59.282	55.000	0.00	0.00	0.00	2.01
765	766	0.733566	CGACACGCCCGCTTAGTAAA	60.734	55.000	0.00	0.00	0.00	2.01
766	767	1.153978	CGACACGCCCGCTTAGTAA	60.154	57.895	0.00	0.00	0.00	2.24
767	768	2.334946	ACGACACGCCCGCTTAGTA	61.335	57.895	0.00	0.00	0.00	1.82
768	769	3.677648	ACGACACGCCCGCTTAGT	61.678	61.111	0.00	0.00	0.00	2.24
769	770	3.179265	CACGACACGCCCGCTTAG	61.179	66.667	0.00	0.00	0.00	2.18
791	792	3.357079	GAAGGTGCAGCACGTGGG	61.357	66.667	21.10	0.00	34.83	4.61
792	793	2.121564	CTTGAAGGTGCAGCACGTGG	62.122	60.000	21.10	8.54	34.83	4.94
793	794	1.280746	CTTGAAGGTGCAGCACGTG	59.719	57.895	21.10	12.28	34.83	4.49
794	795	2.546494	GCTTGAAGGTGCAGCACGT	61.546	57.895	19.42	17.28	34.83	4.49
795	796	2.253452	GCTTGAAGGTGCAGCACG	59.747	61.111	19.42	5.49	34.83	5.34
796	797	2.647297	GGCTTGAAGGTGCAGCAC	59.353	61.111	17.97	17.97	0.00	4.40
797	798	2.598394	GGGCTTGAAGGTGCAGCA	60.598	61.111	19.63	0.00	0.00	4.41
798	799	2.598394	TGGGCTTGAAGGTGCAGC	60.598	61.111	8.11	8.11	0.00	5.25
799	800	1.975407	CCTGGGCTTGAAGGTGCAG	60.975	63.158	0.00	0.00	0.00	4.41
800	801	2.115910	CCTGGGCTTGAAGGTGCA	59.884	61.111	0.00	0.00	0.00	4.57
801	802	3.376918	GCCTGGGCTTGAAGGTGC	61.377	66.667	4.12	0.00	38.26	5.01
802	803	2.115910	TGCCTGGGCTTGAAGGTG	59.884	61.111	13.05	0.00	42.51	4.00
803	804	2.116125	GTGCCTGGGCTTGAAGGT	59.884	61.111	13.05	0.00	42.51	3.50
804	805	3.058160	CGTGCCTGGGCTTGAAGG	61.058	66.667	13.05	0.00	42.51	3.46
805	806	2.032528	TCGTGCCTGGGCTTGAAG	59.967	61.111	13.05	0.00	42.51	3.02
806	807	2.281484	GTCGTGCCTGGGCTTGAA	60.281	61.111	13.05	0.00	42.51	2.69
807	808	4.329545	GGTCGTGCCTGGGCTTGA	62.330	66.667	13.05	7.59	42.51	3.02
820	821	4.849329	GACACGCCCGCTAGGTCG	62.849	72.222	0.00	5.41	39.92	4.79
821	822	4.849329	CGACACGCCCGCTAGGTC	62.849	72.222	0.00	0.00	38.26	3.85
838	839	3.964875	CAACACGTGGGCTGGCAC	61.965	66.667	21.57	0.00	0.00	5.01
841	842	3.964875	GTGCAACACGTGGGCTGG	61.965	66.667	27.26	11.53	36.32	4.85
842	843	3.964875	GGTGCAACACGTGGGCTG	61.965	66.667	27.26	18.92	39.98	4.85
843	844	3.714487	AAGGTGCAACACGTGGGCT	62.714	57.895	27.26	11.14	39.98	5.19
844	845	3.194272	GAAGGTGCAACACGTGGGC	62.194	63.158	21.57	22.25	39.98	5.36
845	846	1.380403	TTGAAGGTGCAACACGTGGG	61.380	55.000	21.57	12.76	39.98	4.61
846	847	0.029300	CTTGAAGGTGCAACACGTGG	59.971	55.000	21.57	3.72	39.98	4.94
847	848	0.592247	GCTTGAAGGTGCAACACGTG	60.592	55.000	15.48	15.48	39.98	4.49
848	849	1.724582	GGCTTGAAGGTGCAACACGT	61.725	55.000	3.64	0.00	39.98	4.49
849	850	1.008538	GGCTTGAAGGTGCAACACG	60.009	57.895	3.64	0.00	39.98	4.49
850	851	1.363807	GGGCTTGAAGGTGCAACAC	59.636	57.895	3.64	0.00	39.98	3.32
851	852	1.076412	TGGGCTTGAAGGTGCAACA	60.076	52.632	3.64	0.00	39.98	3.33
852	853	1.662044	CTGGGCTTGAAGGTGCAAC	59.338	57.895	0.00	0.00	0.00	4.17
853	854	1.531365	CCTGGGCTTGAAGGTGCAA	60.531	57.895	0.00	0.00	0.00	4.08
854	855	2.115910	CCTGGGCTTGAAGGTGCA	59.884	61.111	0.00	0.00	0.00	4.57
855	856	3.376918	GCCTGGGCTTGAAGGTGC	61.377	66.667	4.12	0.00	38.26	5.01
856	857	2.115910	TGCCTGGGCTTGAAGGTG	59.884	61.111	13.05	0.00	42.51	4.00
857	858	2.116125	GTGCCTGGGCTTGAAGGT	59.884	61.111	13.05	0.00	42.51	3.50
858	859	3.058160	CGTGCCTGGGCTTGAAGG	61.058	66.667	13.05	0.00	42.51	3.46
859	860	2.032528	TCGTGCCTGGGCTTGAAG	59.967	61.111	13.05	0.00	42.51	3.02
860	861	2.281484	GTCGTGCCTGGGCTTGAA	60.281	61.111	13.05	0.00	42.51	2.69
861	862	4.329545	GGTCGTGCCTGGGCTTGA	62.330	66.667	13.05	7.59	42.51	3.02
870	871	3.174375	CGTTTACTAACTAGGTCGTGCC	58.826	50.000	0.00	0.00	32.78	5.01
871	872	3.174375	CCGTTTACTAACTAGGTCGTGC	58.826	50.000	0.00	0.00	31.89	5.34
872	873	3.762779	CCCGTTTACTAACTAGGTCGTG	58.237	50.000	0.00	0.00	31.89	4.35
873	874	2.164422	GCCCGTTTACTAACTAGGTCGT	59.836	50.000	0.00	0.00	31.45	4.34
874	875	2.424956	AGCCCGTTTACTAACTAGGTCG	59.575	50.000	0.00	0.00	31.45	4.79
875	876	3.445096	TCAGCCCGTTTACTAACTAGGTC	59.555	47.826	0.00	0.00	31.45	3.85
876	877	3.194329	GTCAGCCCGTTTACTAACTAGGT	59.806	47.826	0.00	0.00	31.45	3.08
877	878	3.194116	TGTCAGCCCGTTTACTAACTAGG	59.806	47.826	0.00	0.00	31.89	3.02
878	879	4.171754	GTGTCAGCCCGTTTACTAACTAG	58.828	47.826	0.00	0.00	31.89	2.57
879	880	3.366273	CGTGTCAGCCCGTTTACTAACTA	60.366	47.826	0.00	0.00	31.89	2.24
880	881	2.608752	CGTGTCAGCCCGTTTACTAACT	60.609	50.000	0.00	0.00	31.89	2.24
881	882	1.723003	CGTGTCAGCCCGTTTACTAAC	59.277	52.381	0.00	0.00	0.00	2.34
882	883	1.936203	GCGTGTCAGCCCGTTTACTAA	60.936	52.381	0.00	0.00	0.00	2.24
883	884	0.388907	GCGTGTCAGCCCGTTTACTA	60.389	55.000	0.00	0.00	0.00	1.82
884	885	1.666872	GCGTGTCAGCCCGTTTACT	60.667	57.895	0.00	0.00	0.00	2.24
885	886	1.666872	AGCGTGTCAGCCCGTTTAC	60.667	57.895	0.00	0.00	38.01	2.01
886	887	1.666553	CAGCGTGTCAGCCCGTTTA	60.667	57.895	0.00	0.00	38.01	2.01
887	888	2.972505	CAGCGTGTCAGCCCGTTT	60.973	61.111	0.00	0.00	38.01	3.60
888	889	4.988598	CCAGCGTGTCAGCCCGTT	62.989	66.667	0.00	0.00	38.01	4.44
894	895	4.994471	TGCAGCCCAGCGTGTCAG	62.994	66.667	0.00	0.00	37.31	3.51
897	898	4.648626	ATGTGCAGCCCAGCGTGT	62.649	61.111	0.00	0.00	37.31	4.49
898	899	2.424705	AAAATGTGCAGCCCAGCGTG	62.425	55.000	0.00	0.00	37.31	5.34
899	900	2.146073	GAAAATGTGCAGCCCAGCGT	62.146	55.000	0.00	0.00	37.31	5.07
900	901	1.444895	GAAAATGTGCAGCCCAGCG	60.445	57.895	0.00	0.00	37.31	5.18
901	902	0.033781	TTGAAAATGTGCAGCCCAGC	59.966	50.000	0.00	0.00	0.00	4.85
902	903	2.232941	AGATTGAAAATGTGCAGCCCAG	59.767	45.455	0.00	0.00	0.00	4.45
903	904	2.028839	CAGATTGAAAATGTGCAGCCCA	60.029	45.455	0.00	0.00	0.00	5.36
904	905	2.028748	ACAGATTGAAAATGTGCAGCCC	60.029	45.455	0.00	0.00	0.00	5.19
905	906	3.308438	ACAGATTGAAAATGTGCAGCC	57.692	42.857	0.00	0.00	0.00	4.85
906	907	3.430895	CCAACAGATTGAAAATGTGCAGC	59.569	43.478	0.00	0.00	38.15	5.25
907	908	3.991773	CCCAACAGATTGAAAATGTGCAG	59.008	43.478	0.00	0.00	38.15	4.41
908	909	3.803021	GCCCAACAGATTGAAAATGTGCA	60.803	43.478	0.00	0.00	38.15	4.57
909	910	2.738314	GCCCAACAGATTGAAAATGTGC	59.262	45.455	0.00	0.00	38.15	4.57
910	911	3.991773	CAGCCCAACAGATTGAAAATGTG	59.008	43.478	0.00	0.00	38.15	3.21
911	912	3.896888	TCAGCCCAACAGATTGAAAATGT	59.103	39.130	0.00	0.00	38.15	2.71
912	913	4.524316	TCAGCCCAACAGATTGAAAATG	57.476	40.909	0.00	0.00	38.15	2.32
913	914	5.750352	AATCAGCCCAACAGATTGAAAAT	57.250	34.783	0.00	0.00	38.15	1.82
914	915	5.549742	AAATCAGCCCAACAGATTGAAAA	57.450	34.783	0.00	0.00	38.15	2.29
915	916	5.549742	AAAATCAGCCCAACAGATTGAAA	57.450	34.783	0.00	0.00	38.15	2.69
916	917	5.549742	AAAAATCAGCCCAACAGATTGAA	57.450	34.783	0.00	0.00	38.15	2.69
917	918	5.185635	CCTAAAAATCAGCCCAACAGATTGA	59.814	40.000	0.00	0.00	38.15	2.57
918	919	5.413499	CCTAAAAATCAGCCCAACAGATTG	58.587	41.667	0.00	0.00	34.95	2.67
919	920	4.081476	GCCTAAAAATCAGCCCAACAGATT	60.081	41.667	0.00	0.00	36.15	2.40
920	921	3.448660	GCCTAAAAATCAGCCCAACAGAT	59.551	43.478	0.00	0.00	0.00	2.90
921	922	2.825532	GCCTAAAAATCAGCCCAACAGA	59.174	45.455	0.00	0.00	0.00	3.41
922	923	2.094026	GGCCTAAAAATCAGCCCAACAG	60.094	50.000	0.00	0.00	39.60	3.16
923	924	1.899142	GGCCTAAAAATCAGCCCAACA	59.101	47.619	0.00	0.00	39.60	3.33
924	925	2.672961	GGCCTAAAAATCAGCCCAAC	57.327	50.000	0.00	0.00	39.60	3.77
928	929	5.473846	GGTCTAATAGGCCTAAAAATCAGCC	59.526	44.000	18.42	8.20	46.13	4.85
929	930	6.062095	TGGTCTAATAGGCCTAAAAATCAGC	58.938	40.000	18.42	9.02	41.63	4.26
930	931	9.965902	ATATGGTCTAATAGGCCTAAAAATCAG	57.034	33.333	18.42	7.80	41.63	2.90
970	971	9.832445	TCTAGAACAAAGAACAAAGTGAGTATT	57.168	29.630	0.00	0.00	0.00	1.89
973	974	9.262358	GTATCTAGAACAAAGAACAAAGTGAGT	57.738	33.333	0.00	0.00	0.00	3.41
974	975	9.261180	TGTATCTAGAACAAAGAACAAAGTGAG	57.739	33.333	0.00	0.00	0.00	3.51
975	976	9.778741	ATGTATCTAGAACAAAGAACAAAGTGA	57.221	29.630	0.00	0.00	0.00	3.41
977	978	9.220767	GGATGTATCTAGAACAAAGAACAAAGT	57.779	33.333	0.00	0.00	0.00	2.66
978	979	9.442047	AGGATGTATCTAGAACAAAGAACAAAG	57.558	33.333	0.00	0.00	0.00	2.77
979	980	9.793259	AAGGATGTATCTAGAACAAAGAACAAA	57.207	29.630	0.00	0.00	0.00	2.83
980	981	9.793259	AAAGGATGTATCTAGAACAAAGAACAA	57.207	29.630	0.00	0.00	0.00	2.83
981	982	9.793259	AAAAGGATGTATCTAGAACAAAGAACA	57.207	29.630	0.00	0.00	0.00	3.18
1001	1002	9.075678	TGGTAACGTAAAAATGGATAAAAAGGA	57.924	29.630	0.00	0.00	42.51	3.36
1002	1003	9.349145	CTGGTAACGTAAAAATGGATAAAAAGG	57.651	33.333	0.00	0.00	42.51	3.11
1006	1007	8.732531	CCTTCTGGTAACGTAAAAATGGATAAA	58.267	33.333	0.00	0.00	42.51	1.40
1007	1008	7.337436	CCCTTCTGGTAACGTAAAAATGGATAA	59.663	37.037	0.00	0.00	42.51	1.75
1008	1009	6.824704	CCCTTCTGGTAACGTAAAAATGGATA	59.175	38.462	0.00	0.00	42.51	2.59
1009	1010	5.650703	CCCTTCTGGTAACGTAAAAATGGAT	59.349	40.000	0.00	0.00	42.51	3.41
1010	1011	5.005094	CCCTTCTGGTAACGTAAAAATGGA	58.995	41.667	0.00	0.00	42.51	3.41
1011	1012	4.380128	GCCCTTCTGGTAACGTAAAAATGG	60.380	45.833	0.00	0.00	42.51	3.16
1012	1013	4.380128	GGCCCTTCTGGTAACGTAAAAATG	60.380	45.833	0.00	0.00	42.51	2.32
1013	1014	3.760151	GGCCCTTCTGGTAACGTAAAAAT	59.240	43.478	0.00	0.00	42.51	1.82
1014	1015	3.148412	GGCCCTTCTGGTAACGTAAAAA	58.852	45.455	0.00	0.00	42.51	1.94
1015	1016	2.106166	TGGCCCTTCTGGTAACGTAAAA	59.894	45.455	0.00	0.00	42.51	1.52
1016	1017	1.698532	TGGCCCTTCTGGTAACGTAAA	59.301	47.619	0.00	0.00	42.51	2.01
1017	1018	1.350071	TGGCCCTTCTGGTAACGTAA	58.650	50.000	0.00	0.00	42.51	3.18
1018	1019	1.208535	CATGGCCCTTCTGGTAACGTA	59.791	52.381	0.00	0.00	42.51	3.57
1019	1020	0.035439	CATGGCCCTTCTGGTAACGT	60.035	55.000	0.00	0.00	42.51	3.99
1020	1021	1.376609	GCATGGCCCTTCTGGTAACG	61.377	60.000	0.00	0.00	42.51	3.18
1021	1022	1.037579	GGCATGGCCCTTCTGGTAAC	61.038	60.000	8.35	0.00	44.06	2.50
1022	1023	1.306296	GGCATGGCCCTTCTGGTAA	59.694	57.895	8.35	0.00	44.06	2.85
1023	1024	3.006677	GGCATGGCCCTTCTGGTA	58.993	61.111	8.35	0.00	44.06	3.25
1123	1124	3.291383	TTTCAGCGGCCAAACGGG	61.291	61.111	2.24	0.00	40.85	5.28
1124	1125	2.050442	GTTTCAGCGGCCAAACGG	60.050	61.111	2.24	0.00	0.00	4.44
1125	1126	2.050442	GGTTTCAGCGGCCAAACG	60.050	61.111	2.24	0.00	33.94	3.60
1126	1127	2.338620	GGGTTTCAGCGGCCAAAC	59.661	61.111	2.24	13.95	0.00	2.93
1127	1128	2.915137	GGGGTTTCAGCGGCCAAA	60.915	61.111	2.24	0.00	0.00	3.28
1128	1129	4.986708	GGGGGTTTCAGCGGCCAA	62.987	66.667	2.24	0.00	0.00	4.52
1130	1131	4.986708	TTGGGGGTTTCAGCGGCC	62.987	66.667	0.00	0.00	0.00	6.13
1131	1132	2.915137	TTTGGGGGTTTCAGCGGC	60.915	61.111	0.00	0.00	0.00	6.53
1132	1133	2.931068	GCTTTGGGGGTTTCAGCGG	61.931	63.158	0.00	0.00	0.00	5.52
1133	1134	2.650778	GCTTTGGGGGTTTCAGCG	59.349	61.111	0.00	0.00	0.00	5.18
1134	1135	1.250840	ATCGCTTTGGGGGTTTCAGC	61.251	55.000	0.00	0.00	0.00	4.26
1135	1136	0.811281	GATCGCTTTGGGGGTTTCAG	59.189	55.000	0.00	0.00	0.00	3.02
1136	1137	0.610785	GGATCGCTTTGGGGGTTTCA	60.611	55.000	0.00	0.00	0.00	2.69
1173	1174	1.028330	GGTAGGTTGGGTTTAGCGGC	61.028	60.000	0.00	0.00	0.00	6.53
1326	1328	2.675423	AGGTACACCGCGCAGAGA	60.675	61.111	8.75	0.00	42.08	3.10
1485	1498	4.124351	TCGTACGGGGAGCGCAAG	62.124	66.667	16.52	0.00	43.44	4.01
1486	1499	4.424566	GTCGTACGGGGAGCGCAA	62.425	66.667	16.52	0.00	0.00	4.85
1489	1502	4.487412	GGTGTCGTACGGGGAGCG	62.487	72.222	16.52	0.00	0.00	5.03
1490	1503	3.376078	TGGTGTCGTACGGGGAGC	61.376	66.667	16.52	9.57	0.00	4.70
1491	1504	2.570181	GTGGTGTCGTACGGGGAG	59.430	66.667	16.52	0.00	0.00	4.30
1492	1505	2.990967	GGTGGTGTCGTACGGGGA	60.991	66.667	16.52	0.00	0.00	4.81
1493	1506	4.424566	CGGTGGTGTCGTACGGGG	62.425	72.222	16.52	0.00	0.00	5.73
1501	1514	3.343421	GTTGGCGTCGGTGGTGTC	61.343	66.667	0.00	0.00	0.00	3.67
1544	1557	4.758165	TCATACGTACATATTCAGAGGCGA	59.242	41.667	0.00	0.00	0.00	5.54
1550	1563	5.366829	TCGGGTCATACGTACATATTCAG	57.633	43.478	0.00	0.00	0.00	3.02
1658	1683	6.293571	GCTTTTGAATTCAGGAAAACAATGGG	60.294	38.462	8.41	0.00	0.00	4.00
1686	1711	6.404734	GCATAGGCATTTACATATAAGGGCAC	60.405	42.308	0.00	0.00	40.72	5.01
1708	1776	2.034878	TCTGAAGATAGACAGGCGCAT	58.965	47.619	10.83	0.00	35.20	4.73
1763	1835	0.460987	GGGTCCTTGAGCATCGACAG	60.461	60.000	0.00	0.00	38.61	3.51
2029	2176	0.489567	AGGTGGACAGAGAAGAGGGT	59.510	55.000	0.00	0.00	0.00	4.34
2072	2220	6.654582	TGAAACTAGAAACAGCATGCTCATAA	59.345	34.615	19.68	0.35	42.53	1.90
2137	2292	9.304731	TGTTACTCGGTTACATGTATAAATGAC	57.695	33.333	10.00	0.36	0.00	3.06
2244	2402	9.905713	TTTAGGAAAGCTAACATCTATCAACAT	57.094	29.630	0.00	0.00	0.00	2.71
2362	2529	3.119743	CGACTGAACATGGACAATGCATT	60.120	43.478	5.99	5.99	40.22	3.56
2896	4215	1.448985	GCAAAAGGACAGCGATACCA	58.551	50.000	0.00	0.00	0.00	3.25
3045	4908	0.969149	CTAGGTGTGTCTGCAGTGGA	59.031	55.000	14.67	0.00	0.00	4.02
3055	4918	3.682718	GCCACTGCATTATCTAGGTGTGT	60.683	47.826	0.00	0.00	37.47	3.72
3056	4919	2.874701	GCCACTGCATTATCTAGGTGTG	59.125	50.000	0.00	0.00	37.47	3.82

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.