Multiple sequence alignment - TraesCS2D01G121800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G121800 chr2D 100.000 4147 0 0 1 4147 70948934 70953080 0.000000e+00 7659.0
1 TraesCS2D01G121800 chr2B 95.286 1103 48 2 2070 3168 107380545 107379443 0.000000e+00 1746.0
2 TraesCS2D01G121800 chr2B 92.101 1190 47 18 574 1758 107382311 107381164 0.000000e+00 1633.0
3 TraesCS2D01G121800 chr2B 95.565 248 11 0 1749 1996 107380785 107380538 8.350000e-107 398.0
4 TraesCS2D01G121800 chr2B 91.813 171 12 2 3163 3332 107379310 107379141 1.930000e-58 237.0
5 TraesCS2D01G121800 chr2B 85.385 130 17 2 344 471 269378121 269378250 2.600000e-27 134.0
6 TraesCS2D01G121800 chr5D 95.108 695 34 0 3453 4147 216532584 216533278 0.000000e+00 1096.0
7 TraesCS2D01G121800 chr5D 84.831 356 45 4 1 347 104395817 104395462 2.370000e-92 350.0
8 TraesCS2D01G121800 chr5D 82.353 357 50 7 1 346 407011004 407010650 8.720000e-77 298.0
9 TraesCS2D01G121800 chr5D 83.959 293 40 2 58 346 458110299 458110010 1.470000e-69 274.0
10 TraesCS2D01G121800 chr5D 89.209 139 12 3 341 476 411794041 411793903 1.980000e-38 171.0
11 TraesCS2D01G121800 chr3D 95.108 695 34 0 3453 4147 380789959 380790653 0.000000e+00 1096.0
12 TraesCS2D01G121800 chr3D 94.820 695 34 2 3453 4147 414660137 414660829 0.000000e+00 1083.0
13 TraesCS2D01G121800 chr3D 79.155 355 40 13 1 346 518740360 518740031 9.030000e-52 215.0
14 TraesCS2D01G121800 chr3D 84.173 139 19 3 340 475 481597126 481597264 9.350000e-27 132.0
15 TraesCS2D01G121800 chr7D 94.964 695 35 0 3453 4147 34793937 34794631 0.000000e+00 1090.0
16 TraesCS2D01G121800 chr7D 83.206 131 21 1 344 473 154146900 154147030 7.280000e-23 119.0
17 TraesCS2D01G121800 chr6D 95.087 692 34 0 3456 4147 59705596 59704905 0.000000e+00 1090.0
18 TraesCS2D01G121800 chr6D 94.949 693 31 4 3456 4147 49620547 49619858 0.000000e+00 1083.0
19 TraesCS2D01G121800 chr4D 94.820 695 35 1 3453 4147 391075056 391075749 0.000000e+00 1083.0
20 TraesCS2D01G121800 chr4D 84.831 356 42 6 1 346 348293162 348293515 8.530000e-92 348.0
21 TraesCS2D01G121800 chr4D 85.926 135 17 2 340 472 29976616 29976482 4.320000e-30 143.0
22 TraesCS2D01G121800 chr3B 94.935 691 35 0 3453 4143 572085656 572086346 0.000000e+00 1083.0
23 TraesCS2D01G121800 chr3B 82.963 135 20 3 342 473 68871329 68871463 7.280000e-23 119.0
24 TraesCS2D01G121800 chr3B 88.889 81 9 0 1689 1769 751848366 751848446 2.640000e-17 100.0
25 TraesCS2D01G121800 chr3B 87.143 70 9 0 1689 1758 751824417 751824486 3.440000e-11 80.5
26 TraesCS2D01G121800 chr1D 94.692 697 36 1 3452 4147 392915245 392914549 0.000000e+00 1081.0
27 TraesCS2D01G121800 chr5B 84.548 343 45 2 12 346 113803087 113802745 2.390000e-87 333.0
28 TraesCS2D01G121800 chr5B 88.780 205 23 0 142 346 633746079 633745875 6.880000e-63 252.0
29 TraesCS2D01G121800 chr5B 88.618 123 12 2 353 473 658539565 658539443 9.290000e-32 148.0
30 TraesCS2D01G121800 chr5B 85.606 132 17 2 344 473 610298237 610298368 2.010000e-28 137.0
31 TraesCS2D01G121800 chr1B 82.621 351 55 6 1 346 470781552 470781901 5.210000e-79 305.0
32 TraesCS2D01G121800 chr7B 81.250 352 55 11 1 346 36911593 36911247 1.470000e-69 274.0
33 TraesCS2D01G121800 chr5A 81.571 331 45 16 27 345 538016620 538016294 4.110000e-65 259.0
34 TraesCS2D01G121800 chr5A 85.106 235 28 2 118 346 646018960 646019193 2.490000e-57 233.0
35 TraesCS2D01G121800 chr4B 79.155 355 47 16 1 346 65959624 65959288 1.940000e-53 220.0
36 TraesCS2D01G121800 chr6A 74.688 320 71 9 1162 1478 603691336 603691024 2.600000e-27 134.0
37 TraesCS2D01G121800 chr6B 84.444 135 18 3 342 473 55123302 55123168 3.360000e-26 130.0
38 TraesCS2D01G121800 chr7A 84.270 89 12 2 1691 1778 64782710 64782623 7.390000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G121800 chr2D 70948934 70953080 4146 False 7659.0 7659 100.00000 1 4147 1 chr2D.!!$F1 4146
1 TraesCS2D01G121800 chr2B 107379141 107382311 3170 True 1003.5 1746 93.69125 574 3332 4 chr2B.!!$R1 2758
2 TraesCS2D01G121800 chr5D 216532584 216533278 694 False 1096.0 1096 95.10800 3453 4147 1 chr5D.!!$F1 694
3 TraesCS2D01G121800 chr3D 380789959 380790653 694 False 1096.0 1096 95.10800 3453 4147 1 chr3D.!!$F1 694
4 TraesCS2D01G121800 chr3D 414660137 414660829 692 False 1083.0 1083 94.82000 3453 4147 1 chr3D.!!$F2 694
5 TraesCS2D01G121800 chr7D 34793937 34794631 694 False 1090.0 1090 94.96400 3453 4147 1 chr7D.!!$F1 694
6 TraesCS2D01G121800 chr6D 59704905 59705596 691 True 1090.0 1090 95.08700 3456 4147 1 chr6D.!!$R2 691
7 TraesCS2D01G121800 chr6D 49619858 49620547 689 True 1083.0 1083 94.94900 3456 4147 1 chr6D.!!$R1 691
8 TraesCS2D01G121800 chr4D 391075056 391075749 693 False 1083.0 1083 94.82000 3453 4147 1 chr4D.!!$F2 694
9 TraesCS2D01G121800 chr3B 572085656 572086346 690 False 1083.0 1083 94.93500 3453 4143 1 chr3B.!!$F2 690
10 TraesCS2D01G121800 chr1D 392914549 392915245 696 True 1081.0 1081 94.69200 3452 4147 1 chr1D.!!$R1 695

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
426 427 0.031994 CCAACCCAAACGGCAGAAAG 59.968 55.0 0.00 0.00 33.26 2.62 F
530 531 0.038892 CACATGCTCCAAACTGCCAC 60.039 55.0 0.00 0.00 0.00 5.01 F
1353 1359 0.179018 AGACCCTTGTTGTGCAGGTC 60.179 55.0 10.28 10.28 40.68 3.85 F
2019 2413 0.035630 CTGCTTGGCTAGAGTGGCTT 60.036 55.0 0.00 0.00 0.00 4.35 F
2020 2414 0.036010 TGCTTGGCTAGAGTGGCTTC 60.036 55.0 0.00 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2000 2394 0.035630 AAGCCACTCTAGCCAAGCAG 60.036 55.0 0.00 0.0 0.00 4.24 R
2001 2395 0.036010 GAAGCCACTCTAGCCAAGCA 60.036 55.0 0.00 0.0 0.00 3.91 R
2339 2733 0.179018 ACCCTTGAACGCTTGCTTCT 60.179 50.0 0.00 0.0 0.00 2.85 R
2935 3332 0.179179 GAGCTGTTTGGCGAGATTGC 60.179 55.0 0.00 0.0 37.29 3.56 R
3332 3868 0.465460 GACTGGCGGCCCAAATCATA 60.465 55.0 17.97 0.0 41.58 2.15 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.394712 CGCTCCTTTCCGGTGCCT 62.395 66.667 0.00 0.00 46.98 4.75
47 48 2.034221 GCTCCTTTCCGGTGCCTT 59.966 61.111 0.00 0.00 44.59 4.35
48 49 1.603739 GCTCCTTTCCGGTGCCTTT 60.604 57.895 0.00 0.00 44.59 3.11
49 50 1.866853 GCTCCTTTCCGGTGCCTTTG 61.867 60.000 0.00 0.00 44.59 2.77
50 51 1.866853 CTCCTTTCCGGTGCCTTTGC 61.867 60.000 0.00 0.00 38.26 3.68
51 52 2.650778 CTTTCCGGTGCCTTTGCC 59.349 61.111 0.00 0.00 36.33 4.52
52 53 2.123683 TTTCCGGTGCCTTTGCCA 60.124 55.556 0.00 0.00 36.33 4.92
53 54 2.146073 CTTTCCGGTGCCTTTGCCAG 62.146 60.000 0.00 0.00 36.33 4.85
56 57 4.047059 CGGTGCCTTTGCCAGCAG 62.047 66.667 0.00 0.00 40.28 4.24
58 59 4.368543 GTGCCTTTGCCAGCAGCC 62.369 66.667 0.00 0.00 42.71 4.85
62 63 4.047059 CTTTGCCAGCAGCCGGTG 62.047 66.667 1.90 0.89 42.71 4.94
87 88 4.766632 CCCCCTCCCCAAAGCTGC 62.767 72.222 0.00 0.00 0.00 5.25
88 89 4.766632 CCCCTCCCCAAAGCTGCC 62.767 72.222 0.00 0.00 0.00 4.85
89 90 3.983420 CCCTCCCCAAAGCTGCCA 61.983 66.667 0.00 0.00 0.00 4.92
90 91 2.677875 CCTCCCCAAAGCTGCCAC 60.678 66.667 0.00 0.00 0.00 5.01
91 92 2.677875 CTCCCCAAAGCTGCCACC 60.678 66.667 0.00 0.00 0.00 4.61
92 93 3.185203 TCCCCAAAGCTGCCACCT 61.185 61.111 0.00 0.00 0.00 4.00
93 94 2.677875 CCCCAAAGCTGCCACCTC 60.678 66.667 0.00 0.00 0.00 3.85
94 95 2.677875 CCCAAAGCTGCCACCTCC 60.678 66.667 0.00 0.00 0.00 4.30
95 96 2.437897 CCAAAGCTGCCACCTCCT 59.562 61.111 0.00 0.00 0.00 3.69
96 97 1.685224 CCAAAGCTGCCACCTCCTA 59.315 57.895 0.00 0.00 0.00 2.94
97 98 0.678048 CCAAAGCTGCCACCTCCTAC 60.678 60.000 0.00 0.00 0.00 3.18
98 99 1.021390 CAAAGCTGCCACCTCCTACG 61.021 60.000 0.00 0.00 0.00 3.51
99 100 1.481056 AAAGCTGCCACCTCCTACGT 61.481 55.000 0.00 0.00 0.00 3.57
100 101 1.889530 AAGCTGCCACCTCCTACGTC 61.890 60.000 0.00 0.00 0.00 4.34
101 102 2.490217 CTGCCACCTCCTACGTCG 59.510 66.667 0.00 0.00 0.00 5.12
102 103 3.701604 CTGCCACCTCCTACGTCGC 62.702 68.421 0.00 0.00 0.00 5.19
103 104 4.509737 GCCACCTCCTACGTCGCC 62.510 72.222 0.00 0.00 0.00 5.54
104 105 4.189188 CCACCTCCTACGTCGCCG 62.189 72.222 0.00 0.00 40.83 6.46
106 107 3.130160 ACCTCCTACGTCGCCGTC 61.130 66.667 0.00 0.00 46.28 4.79
107 108 3.129502 CCTCCTACGTCGCCGTCA 61.130 66.667 0.00 0.00 46.28 4.35
108 109 2.099831 CTCCTACGTCGCCGTCAC 59.900 66.667 0.00 0.00 46.28 3.67
109 110 3.392595 CTCCTACGTCGCCGTCACC 62.393 68.421 0.00 0.00 46.28 4.02
110 111 3.740397 CCTACGTCGCCGTCACCA 61.740 66.667 0.00 0.00 46.28 4.17
111 112 2.503375 CTACGTCGCCGTCACCAC 60.503 66.667 0.00 0.00 46.28 4.16
112 113 3.958822 CTACGTCGCCGTCACCACC 62.959 68.421 0.00 0.00 46.28 4.61
142 143 4.344865 GGGCACCGAAGCTTCCCA 62.345 66.667 20.62 0.00 40.86 4.37
143 144 3.056328 GGCACCGAAGCTTCCCAC 61.056 66.667 20.62 7.76 34.17 4.61
144 145 2.032681 GCACCGAAGCTTCCCACT 59.967 61.111 20.62 0.00 0.00 4.00
145 146 2.035442 GCACCGAAGCTTCCCACTC 61.035 63.158 20.62 3.07 0.00 3.51
146 147 1.376037 CACCGAAGCTTCCCACTCC 60.376 63.158 20.62 0.00 0.00 3.85
147 148 2.125512 CCGAAGCTTCCCACTCCG 60.126 66.667 20.62 7.64 0.00 4.63
148 149 2.646175 CCGAAGCTTCCCACTCCGA 61.646 63.158 20.62 0.00 0.00 4.55
149 150 1.446272 CGAAGCTTCCCACTCCGAC 60.446 63.158 20.62 0.00 0.00 4.79
150 151 1.446272 GAAGCTTCCCACTCCGACG 60.446 63.158 15.97 0.00 0.00 5.12
151 152 3.591254 AAGCTTCCCACTCCGACGC 62.591 63.158 0.00 0.00 0.00 5.19
153 154 4.796231 CTTCCCACTCCGACGCCG 62.796 72.222 0.00 0.00 0.00 6.46
177 178 4.811364 GCAGGAAGCTGCCTCCCC 62.811 72.222 11.65 0.00 43.99 4.81
178 179 4.479993 CAGGAAGCTGCCTCCCCG 62.480 72.222 11.65 0.00 35.66 5.73
195 196 4.243008 GCCCCGGCTAGCTCCTTC 62.243 72.222 15.72 0.00 38.26 3.46
196 197 3.917760 CCCCGGCTAGCTCCTTCG 61.918 72.222 15.72 9.02 0.00 3.79
197 198 3.148279 CCCGGCTAGCTCCTTCGT 61.148 66.667 15.72 0.00 0.00 3.85
198 199 2.722201 CCCGGCTAGCTCCTTCGTT 61.722 63.158 15.72 0.00 0.00 3.85
199 200 1.218316 CCGGCTAGCTCCTTCGTTT 59.782 57.895 15.72 0.00 0.00 3.60
200 201 1.084370 CCGGCTAGCTCCTTCGTTTG 61.084 60.000 15.72 0.00 0.00 2.93
201 202 0.108804 CGGCTAGCTCCTTCGTTTGA 60.109 55.000 15.72 0.00 0.00 2.69
202 203 1.360820 GGCTAGCTCCTTCGTTTGAC 58.639 55.000 15.72 0.00 0.00 3.18
203 204 1.337823 GGCTAGCTCCTTCGTTTGACA 60.338 52.381 15.72 0.00 0.00 3.58
204 205 1.727335 GCTAGCTCCTTCGTTTGACAC 59.273 52.381 7.70 0.00 0.00 3.67
205 206 2.338500 CTAGCTCCTTCGTTTGACACC 58.662 52.381 0.00 0.00 0.00 4.16
206 207 0.600255 AGCTCCTTCGTTTGACACCG 60.600 55.000 0.00 0.00 0.00 4.94
207 208 1.860078 CTCCTTCGTTTGACACCGC 59.140 57.895 0.00 0.00 0.00 5.68
208 209 1.566018 CTCCTTCGTTTGACACCGCC 61.566 60.000 0.00 0.00 0.00 6.13
209 210 2.613506 CCTTCGTTTGACACCGCCC 61.614 63.158 0.00 0.00 0.00 6.13
210 211 1.890041 CTTCGTTTGACACCGCCCA 60.890 57.895 0.00 0.00 0.00 5.36
211 212 2.113131 CTTCGTTTGACACCGCCCAC 62.113 60.000 0.00 0.00 0.00 4.61
212 213 2.590575 CGTTTGACACCGCCCACT 60.591 61.111 0.00 0.00 0.00 4.00
213 214 2.892334 CGTTTGACACCGCCCACTG 61.892 63.158 0.00 0.00 0.00 3.66
214 215 1.822186 GTTTGACACCGCCCACTGT 60.822 57.895 0.00 0.00 0.00 3.55
215 216 1.525077 TTTGACACCGCCCACTGTC 60.525 57.895 0.00 0.00 37.83 3.51
216 217 2.951475 TTTGACACCGCCCACTGTCC 62.951 60.000 0.00 0.00 36.70 4.02
217 218 3.626924 GACACCGCCCACTGTCCT 61.627 66.667 0.00 0.00 32.15 3.85
218 219 3.883744 GACACCGCCCACTGTCCTG 62.884 68.421 0.00 0.00 32.15 3.86
219 220 3.625897 CACCGCCCACTGTCCTGA 61.626 66.667 0.00 0.00 0.00 3.86
220 221 3.626924 ACCGCCCACTGTCCTGAC 61.627 66.667 0.00 0.00 0.00 3.51
221 222 4.742201 CCGCCCACTGTCCTGACG 62.742 72.222 0.00 0.00 0.00 4.35
224 225 4.742201 CCCACTGTCCTGACGCCG 62.742 72.222 0.00 0.00 0.00 6.46
225 226 4.742201 CCACTGTCCTGACGCCGG 62.742 72.222 0.00 0.00 0.00 6.13
228 229 4.457496 CTGTCCTGACGCCGGCAT 62.457 66.667 28.98 12.81 0.00 4.40
229 230 4.758251 TGTCCTGACGCCGGCATG 62.758 66.667 28.98 14.14 0.00 4.06
239 240 3.554692 CCGGCATGCTCGTCGAAC 61.555 66.667 18.92 0.00 35.58 3.95
240 241 3.902063 CGGCATGCTCGTCGAACG 61.902 66.667 18.92 5.96 44.19 3.95
241 242 4.210304 GGCATGCTCGTCGAACGC 62.210 66.667 18.92 0.00 42.21 4.84
242 243 4.210304 GCATGCTCGTCGAACGCC 62.210 66.667 11.37 0.00 42.21 5.68
243 244 3.902063 CATGCTCGTCGAACGCCG 61.902 66.667 4.25 0.00 42.21 6.46
267 268 2.034687 CAGCCACCTGGTCCAAGG 59.965 66.667 0.00 0.00 43.57 3.61
268 269 2.121963 AGCCACCTGGTCCAAGGA 60.122 61.111 12.72 0.00 40.02 3.36
269 270 1.774217 AGCCACCTGGTCCAAGGAA 60.774 57.895 12.72 0.00 40.02 3.36
270 271 1.303643 GCCACCTGGTCCAAGGAAG 60.304 63.158 12.72 5.96 40.02 3.46
271 272 1.380302 CCACCTGGTCCAAGGAAGG 59.620 63.158 12.72 5.48 40.02 3.46
272 273 1.303643 CACCTGGTCCAAGGAAGGC 60.304 63.158 12.72 0.00 40.02 4.35
273 274 2.045926 CCTGGTCCAAGGAAGGCG 60.046 66.667 0.00 0.00 40.02 5.52
274 275 2.747855 CTGGTCCAAGGAAGGCGC 60.748 66.667 0.00 0.00 0.00 6.53
275 276 3.551496 CTGGTCCAAGGAAGGCGCA 62.551 63.158 10.83 0.00 0.00 6.09
276 277 3.056328 GGTCCAAGGAAGGCGCAC 61.056 66.667 10.83 0.00 0.00 5.34
277 278 3.423154 GTCCAAGGAAGGCGCACG 61.423 66.667 10.83 0.00 0.00 5.34
278 279 3.936203 TCCAAGGAAGGCGCACGT 61.936 61.111 10.83 0.00 0.00 4.49
279 280 3.423154 CCAAGGAAGGCGCACGTC 61.423 66.667 10.83 6.50 0.00 4.34
280 281 2.357517 CAAGGAAGGCGCACGTCT 60.358 61.111 10.83 0.00 0.00 4.18
281 282 2.048127 AAGGAAGGCGCACGTCTC 60.048 61.111 10.83 0.00 0.00 3.36
282 283 2.574955 AAGGAAGGCGCACGTCTCT 61.575 57.895 10.83 3.75 0.00 3.10
283 284 2.048127 GGAAGGCGCACGTCTCTT 60.048 61.111 10.83 0.99 0.00 2.85
284 285 1.668151 GGAAGGCGCACGTCTCTTT 60.668 57.895 10.83 0.00 0.00 2.52
285 286 1.493311 GAAGGCGCACGTCTCTTTG 59.507 57.895 10.83 0.00 0.00 2.77
286 287 1.222115 GAAGGCGCACGTCTCTTTGT 61.222 55.000 10.83 0.00 0.00 2.83
287 288 1.222115 AAGGCGCACGTCTCTTTGTC 61.222 55.000 10.83 0.00 0.00 3.18
288 289 2.465920 GCGCACGTCTCTTTGTCG 59.534 61.111 0.30 0.00 0.00 4.35
289 290 3.000080 GCGCACGTCTCTTTGTCGG 62.000 63.158 0.30 0.00 0.00 4.79
290 291 2.853914 GCACGTCTCTTTGTCGGC 59.146 61.111 0.00 0.00 0.00 5.54
291 292 2.668280 GCACGTCTCTTTGTCGGCC 61.668 63.158 0.00 0.00 0.00 6.13
292 293 1.300620 CACGTCTCTTTGTCGGCCA 60.301 57.895 2.24 0.00 0.00 5.36
293 294 1.006102 ACGTCTCTTTGTCGGCCAG 60.006 57.895 2.24 0.00 0.00 4.85
294 295 2.383527 CGTCTCTTTGTCGGCCAGC 61.384 63.158 2.24 0.00 0.00 4.85
295 296 1.004440 GTCTCTTTGTCGGCCAGCT 60.004 57.895 2.24 0.00 0.00 4.24
296 297 0.603975 GTCTCTTTGTCGGCCAGCTT 60.604 55.000 2.24 0.00 0.00 3.74
297 298 0.320771 TCTCTTTGTCGGCCAGCTTC 60.321 55.000 2.24 0.00 0.00 3.86
298 299 0.321122 CTCTTTGTCGGCCAGCTTCT 60.321 55.000 2.24 0.00 0.00 2.85
299 300 0.108585 TCTTTGTCGGCCAGCTTCTT 59.891 50.000 2.24 0.00 0.00 2.52
300 301 0.519077 CTTTGTCGGCCAGCTTCTTC 59.481 55.000 2.24 0.00 0.00 2.87
301 302 1.227999 TTTGTCGGCCAGCTTCTTCG 61.228 55.000 2.24 0.00 0.00 3.79
302 303 2.048127 GTCGGCCAGCTTCTTCGT 60.048 61.111 2.24 0.00 0.00 3.85
303 304 2.095252 GTCGGCCAGCTTCTTCGTC 61.095 63.158 2.24 0.00 0.00 4.20
304 305 3.181967 CGGCCAGCTTCTTCGTCG 61.182 66.667 2.24 0.00 0.00 5.12
305 306 2.261671 GGCCAGCTTCTTCGTCGA 59.738 61.111 0.00 0.00 0.00 4.20
306 307 1.153549 GGCCAGCTTCTTCGTCGAT 60.154 57.895 0.00 0.00 0.00 3.59
307 308 1.424493 GGCCAGCTTCTTCGTCGATG 61.424 60.000 0.00 0.00 0.00 3.84
308 309 2.002127 CCAGCTTCTTCGTCGATGC 58.998 57.895 0.00 0.00 35.12 3.91
309 310 1.424493 CCAGCTTCTTCGTCGATGCC 61.424 60.000 0.00 0.00 35.39 4.40
310 311 1.153549 AGCTTCTTCGTCGATGCCC 60.154 57.895 0.00 0.00 35.39 5.36
311 312 2.517450 GCTTCTTCGTCGATGCCCG 61.517 63.158 0.00 0.00 40.25 6.13
312 313 2.508439 TTCTTCGTCGATGCCCGC 60.508 61.111 0.00 0.00 38.37 6.13
313 314 3.289704 TTCTTCGTCGATGCCCGCA 62.290 57.895 0.00 0.00 38.37 5.69
314 315 2.773397 TTCTTCGTCGATGCCCGCAA 62.773 55.000 0.00 0.00 38.37 4.85
315 316 2.802667 CTTCGTCGATGCCCGCAAG 61.803 63.158 0.00 0.00 38.37 4.01
318 319 3.869272 GTCGATGCCCGCAAGCTG 61.869 66.667 0.00 0.00 38.37 4.24
319 320 4.393155 TCGATGCCCGCAAGCTGT 62.393 61.111 0.00 0.00 38.37 4.40
320 321 3.434319 CGATGCCCGCAAGCTGTT 61.434 61.111 0.00 0.00 0.00 3.16
321 322 2.486966 GATGCCCGCAAGCTGTTC 59.513 61.111 0.00 0.00 0.00 3.18
322 323 3.386867 GATGCCCGCAAGCTGTTCG 62.387 63.158 0.00 0.00 0.00 3.95
323 324 3.899981 ATGCCCGCAAGCTGTTCGA 62.900 57.895 0.00 0.00 0.00 3.71
324 325 4.090057 GCCCGCAAGCTGTTCGAC 62.090 66.667 4.38 0.00 0.00 4.20
325 326 2.664851 CCCGCAAGCTGTTCGACA 60.665 61.111 4.38 0.00 0.00 4.35
332 333 0.663153 AAGCTGTTCGACAGTTTGCC 59.337 50.000 13.32 1.09 45.75 4.52
333 334 2.016604 AAGCTGTTCGACAGTTTGCCA 61.017 47.619 13.32 0.00 45.75 4.92
334 335 3.520381 AAGCTGTTCGACAGTTTGCCAA 61.520 45.455 13.32 0.00 45.75 4.52
335 336 2.389713 CTGTTCGACAGTTTGCCAAG 57.610 50.000 6.79 0.00 41.19 3.61
336 337 1.002468 CTGTTCGACAGTTTGCCAAGG 60.002 52.381 6.79 0.00 41.19 3.61
337 338 1.021968 GTTCGACAGTTTGCCAAGGT 58.978 50.000 0.00 0.00 0.00 3.50
338 339 2.215196 GTTCGACAGTTTGCCAAGGTA 58.785 47.619 0.00 0.00 0.00 3.08
339 340 1.873698 TCGACAGTTTGCCAAGGTAC 58.126 50.000 0.00 0.00 0.00 3.34
340 341 1.139256 TCGACAGTTTGCCAAGGTACA 59.861 47.619 0.00 0.00 0.00 2.90
341 342 1.944024 CGACAGTTTGCCAAGGTACAA 59.056 47.619 0.00 0.00 0.00 2.41
342 343 2.356382 CGACAGTTTGCCAAGGTACAAA 59.644 45.455 0.00 0.00 33.55 2.83
343 344 3.181495 CGACAGTTTGCCAAGGTACAAAA 60.181 43.478 0.00 0.00 37.50 2.44
344 345 4.499019 CGACAGTTTGCCAAGGTACAAAAT 60.499 41.667 0.00 0.00 37.50 1.82
347 348 5.200368 AGTTTGCCAAGGTACAAAATGAG 57.800 39.130 0.00 0.00 37.50 2.90
348 349 4.649218 AGTTTGCCAAGGTACAAAATGAGT 59.351 37.500 0.00 0.00 37.50 3.41
349 350 4.846779 TTGCCAAGGTACAAAATGAGTC 57.153 40.909 0.00 0.00 0.00 3.36
350 351 2.811431 TGCCAAGGTACAAAATGAGTCG 59.189 45.455 0.00 0.00 0.00 4.18
351 352 3.071479 GCCAAGGTACAAAATGAGTCGA 58.929 45.455 0.00 0.00 0.00 4.20
352 353 3.120304 GCCAAGGTACAAAATGAGTCGAC 60.120 47.826 7.70 7.70 0.00 4.20
353 354 3.122948 CCAAGGTACAAAATGAGTCGACG 59.877 47.826 10.46 0.00 0.00 5.12
354 355 2.334838 AGGTACAAAATGAGTCGACGC 58.665 47.619 12.80 12.80 0.00 5.19
355 356 1.058695 GGTACAAAATGAGTCGACGCG 59.941 52.381 14.68 3.53 0.00 6.01
356 357 1.717645 GTACAAAATGAGTCGACGCGT 59.282 47.619 13.85 13.85 0.00 6.01
357 358 1.214367 ACAAAATGAGTCGACGCGTT 58.786 45.000 19.38 19.38 0.00 4.84
358 359 1.070843 ACAAAATGAGTCGACGCGTTG 60.071 47.619 24.48 20.76 0.00 4.10
359 360 0.511221 AAAATGAGTCGACGCGTTGG 59.489 50.000 24.48 15.24 0.00 3.77
360 361 1.289109 AAATGAGTCGACGCGTTGGG 61.289 55.000 24.48 12.67 0.00 4.12
361 362 3.642778 ATGAGTCGACGCGTTGGGG 62.643 63.158 25.66 10.14 0.00 4.96
377 378 2.676471 GGCACTGCCGACCCAAAT 60.676 61.111 3.73 0.00 39.62 2.32
378 379 2.700773 GGCACTGCCGACCCAAATC 61.701 63.158 3.73 0.00 39.62 2.17
379 380 1.971167 GCACTGCCGACCCAAATCA 60.971 57.895 0.00 0.00 0.00 2.57
380 381 1.315257 GCACTGCCGACCCAAATCAT 61.315 55.000 0.00 0.00 0.00 2.45
381 382 2.016604 GCACTGCCGACCCAAATCATA 61.017 52.381 0.00 0.00 0.00 2.15
382 383 2.364632 CACTGCCGACCCAAATCATAA 58.635 47.619 0.00 0.00 0.00 1.90
383 384 2.752354 CACTGCCGACCCAAATCATAAA 59.248 45.455 0.00 0.00 0.00 1.40
384 385 3.381272 CACTGCCGACCCAAATCATAAAT 59.619 43.478 0.00 0.00 0.00 1.40
385 386 4.578516 CACTGCCGACCCAAATCATAAATA 59.421 41.667 0.00 0.00 0.00 1.40
386 387 4.821805 ACTGCCGACCCAAATCATAAATAG 59.178 41.667 0.00 0.00 0.00 1.73
387 388 4.141287 TGCCGACCCAAATCATAAATAGG 58.859 43.478 0.00 0.00 0.00 2.57
388 389 3.506067 GCCGACCCAAATCATAAATAGGG 59.494 47.826 0.00 0.00 42.07 3.53
389 390 3.506067 CCGACCCAAATCATAAATAGGGC 59.494 47.826 0.00 0.00 39.97 5.19
390 391 3.188460 CGACCCAAATCATAAATAGGGCG 59.812 47.826 0.00 0.00 39.97 6.13
391 392 3.496331 ACCCAAATCATAAATAGGGCGG 58.504 45.455 0.00 0.00 39.97 6.13
392 393 3.139397 ACCCAAATCATAAATAGGGCGGA 59.861 43.478 0.00 0.00 39.97 5.54
393 394 3.506067 CCCAAATCATAAATAGGGCGGAC 59.494 47.826 0.00 0.00 0.00 4.79
394 395 3.188460 CCAAATCATAAATAGGGCGGACG 59.812 47.826 0.00 0.00 0.00 4.79
395 396 2.094762 ATCATAAATAGGGCGGACGC 57.905 50.000 8.39 8.39 41.06 5.19
414 415 4.329545 GAGCGAGTGGCCAACCCA 62.330 66.667 7.24 0.00 45.17 4.51
423 424 2.909965 GCCAACCCAAACGGCAGA 60.910 61.111 0.00 0.00 45.52 4.26
424 425 2.494530 GCCAACCCAAACGGCAGAA 61.495 57.895 0.00 0.00 45.52 3.02
425 426 2.022240 GCCAACCCAAACGGCAGAAA 62.022 55.000 0.00 0.00 45.52 2.52
426 427 0.031994 CCAACCCAAACGGCAGAAAG 59.968 55.000 0.00 0.00 33.26 2.62
427 428 0.597377 CAACCCAAACGGCAGAAAGC 60.597 55.000 0.00 0.00 44.65 3.51
438 439 1.606606 GCAGAAAGCGGACAAAATCG 58.393 50.000 0.00 0.00 0.00 3.34
443 444 2.559330 GCGGACAAAATCGCCGTT 59.441 55.556 0.00 0.00 46.38 4.44
444 445 1.511254 GCGGACAAAATCGCCGTTC 60.511 57.895 0.00 0.00 46.38 3.95
445 446 1.225637 CGGACAAAATCGCCGTTCG 60.226 57.895 0.00 0.00 40.17 3.95
446 447 1.864176 GGACAAAATCGCCGTTCGT 59.136 52.632 0.00 0.00 39.67 3.85
447 448 0.236449 GGACAAAATCGCCGTTCGTT 59.764 50.000 0.00 0.00 39.67 3.85
448 449 1.334329 GGACAAAATCGCCGTTCGTTT 60.334 47.619 0.00 0.00 39.67 3.60
449 450 1.706597 GACAAAATCGCCGTTCGTTTG 59.293 47.619 8.04 8.04 38.97 2.93
450 451 1.049251 CAAAATCGCCGTTCGTTTGG 58.951 50.000 0.00 0.00 39.67 3.28
451 452 0.039888 AAAATCGCCGTTCGTTTGGG 60.040 50.000 0.00 0.00 39.67 4.12
452 453 1.167781 AAATCGCCGTTCGTTTGGGT 61.168 50.000 0.00 0.00 39.67 4.51
453 454 1.571215 AATCGCCGTTCGTTTGGGTC 61.571 55.000 0.00 0.00 39.67 4.46
454 455 4.067016 CGCCGTTCGTTTGGGTCG 62.067 66.667 0.00 0.00 0.00 4.79
455 456 3.719144 GCCGTTCGTTTGGGTCGG 61.719 66.667 0.00 0.00 43.37 4.79
456 457 3.719144 CCGTTCGTTTGGGTCGGC 61.719 66.667 0.00 0.00 35.01 5.54
457 458 4.067016 CGTTCGTTTGGGTCGGCG 62.067 66.667 0.00 0.00 0.00 6.46
458 459 4.379143 GTTCGTTTGGGTCGGCGC 62.379 66.667 0.00 0.00 0.00 6.53
459 460 4.912485 TTCGTTTGGGTCGGCGCA 62.912 61.111 10.83 1.19 35.68 6.09
460 461 4.690719 TCGTTTGGGTCGGCGCAT 62.691 61.111 7.88 0.00 37.40 4.73
461 462 3.732892 CGTTTGGGTCGGCGCATT 61.733 61.111 7.88 0.00 37.40 3.56
462 463 2.126502 GTTTGGGTCGGCGCATTG 60.127 61.111 7.88 0.00 37.40 2.82
463 464 3.369400 TTTGGGTCGGCGCATTGG 61.369 61.111 7.88 0.00 37.40 3.16
464 465 3.851897 TTTGGGTCGGCGCATTGGA 62.852 57.895 7.88 0.00 37.40 3.53
465 466 4.776322 TGGGTCGGCGCATTGGAG 62.776 66.667 10.83 0.00 32.36 3.86
466 467 4.778143 GGGTCGGCGCATTGGAGT 62.778 66.667 10.83 0.00 0.00 3.85
467 468 2.746277 GGTCGGCGCATTGGAGTT 60.746 61.111 10.83 0.00 0.00 3.01
468 469 2.480555 GTCGGCGCATTGGAGTTG 59.519 61.111 10.83 0.00 0.00 3.16
469 470 3.430862 TCGGCGCATTGGAGTTGC 61.431 61.111 10.83 0.00 36.74 4.17
470 471 3.434319 CGGCGCATTGGAGTTGCT 61.434 61.111 10.83 0.00 37.96 3.91
471 472 2.486966 GGCGCATTGGAGTTGCTC 59.513 61.111 10.83 0.00 37.96 4.26
472 473 2.042831 GGCGCATTGGAGTTGCTCT 61.043 57.895 10.83 0.00 37.96 4.09
473 474 1.589716 GGCGCATTGGAGTTGCTCTT 61.590 55.000 10.83 0.00 37.96 2.85
474 475 1.086696 GCGCATTGGAGTTGCTCTTA 58.913 50.000 0.30 0.00 37.96 2.10
475 476 1.672881 GCGCATTGGAGTTGCTCTTAT 59.327 47.619 0.30 0.00 37.96 1.73
476 477 2.286654 GCGCATTGGAGTTGCTCTTATC 60.287 50.000 0.30 0.00 37.96 1.75
477 478 2.938451 CGCATTGGAGTTGCTCTTATCA 59.062 45.455 0.00 0.00 37.96 2.15
478 479 3.242543 CGCATTGGAGTTGCTCTTATCAC 60.243 47.826 0.00 0.00 37.96 3.06
479 480 3.065925 GCATTGGAGTTGCTCTTATCACC 59.934 47.826 0.00 0.00 37.14 4.02
480 481 4.264253 CATTGGAGTTGCTCTTATCACCA 58.736 43.478 0.00 0.00 0.00 4.17
481 482 3.616956 TGGAGTTGCTCTTATCACCAG 57.383 47.619 0.00 0.00 0.00 4.00
482 483 2.284190 GGAGTTGCTCTTATCACCAGC 58.716 52.381 0.00 0.00 0.00 4.85
483 484 1.929836 GAGTTGCTCTTATCACCAGCG 59.070 52.381 0.00 0.00 35.81 5.18
484 485 1.276421 AGTTGCTCTTATCACCAGCGT 59.724 47.619 0.00 0.00 35.81 5.07
485 486 1.661112 GTTGCTCTTATCACCAGCGTC 59.339 52.381 0.00 0.00 35.81 5.19
486 487 0.175760 TGCTCTTATCACCAGCGTCC 59.824 55.000 0.00 0.00 35.81 4.79
487 488 0.175760 GCTCTTATCACCAGCGTCCA 59.824 55.000 0.00 0.00 0.00 4.02
488 489 1.405526 GCTCTTATCACCAGCGTCCAA 60.406 52.381 0.00 0.00 0.00 3.53
489 490 2.743183 GCTCTTATCACCAGCGTCCAAT 60.743 50.000 0.00 0.00 0.00 3.16
490 491 3.535561 CTCTTATCACCAGCGTCCAATT 58.464 45.455 0.00 0.00 0.00 2.32
491 492 3.941483 CTCTTATCACCAGCGTCCAATTT 59.059 43.478 0.00 0.00 0.00 1.82
492 493 4.331968 TCTTATCACCAGCGTCCAATTTT 58.668 39.130 0.00 0.00 0.00 1.82
493 494 5.492895 TCTTATCACCAGCGTCCAATTTTA 58.507 37.500 0.00 0.00 0.00 1.52
494 495 6.119536 TCTTATCACCAGCGTCCAATTTTAT 58.880 36.000 0.00 0.00 0.00 1.40
495 496 6.601613 TCTTATCACCAGCGTCCAATTTTATT 59.398 34.615 0.00 0.00 0.00 1.40
496 497 4.433186 TCACCAGCGTCCAATTTTATTG 57.567 40.909 0.00 0.00 0.00 1.90
497 498 3.192422 TCACCAGCGTCCAATTTTATTGG 59.808 43.478 11.37 11.37 40.87 3.16
498 499 2.495669 ACCAGCGTCCAATTTTATTGGG 59.504 45.455 16.22 4.90 39.96 4.12
499 500 2.495669 CCAGCGTCCAATTTTATTGGGT 59.504 45.455 16.22 0.00 39.96 4.51
500 501 3.510719 CAGCGTCCAATTTTATTGGGTG 58.489 45.455 16.22 10.93 39.96 4.61
501 502 2.495669 AGCGTCCAATTTTATTGGGTGG 59.504 45.455 16.22 8.53 39.96 4.61
502 503 2.418060 GCGTCCAATTTTATTGGGTGGG 60.418 50.000 16.22 6.60 39.96 4.61
503 504 2.829120 CGTCCAATTTTATTGGGTGGGT 59.171 45.455 16.22 0.00 39.96 4.51
504 505 3.119280 CGTCCAATTTTATTGGGTGGGTC 60.119 47.826 16.22 3.14 39.96 4.46
505 506 3.196901 GTCCAATTTTATTGGGTGGGTCC 59.803 47.826 16.22 0.00 39.96 4.46
516 517 2.435663 TGGGTCCCACAGCACATG 59.564 61.111 6.47 0.00 0.00 3.21
517 518 3.064324 GGGTCCCACAGCACATGC 61.064 66.667 1.78 0.00 42.49 4.06
527 528 4.565531 GCACATGCTCCAAACTGC 57.434 55.556 0.00 0.00 38.21 4.40
528 529 1.080298 GCACATGCTCCAAACTGCC 60.080 57.895 0.00 0.00 38.21 4.85
529 530 1.808531 GCACATGCTCCAAACTGCCA 61.809 55.000 0.00 0.00 38.21 4.92
530 531 0.038892 CACATGCTCCAAACTGCCAC 60.039 55.000 0.00 0.00 0.00 5.01
531 532 0.467844 ACATGCTCCAAACTGCCACA 60.468 50.000 0.00 0.00 0.00 4.17
532 533 0.675083 CATGCTCCAAACTGCCACAA 59.325 50.000 0.00 0.00 0.00 3.33
533 534 0.675633 ATGCTCCAAACTGCCACAAC 59.324 50.000 0.00 0.00 0.00 3.32
534 535 0.682532 TGCTCCAAACTGCCACAACA 60.683 50.000 0.00 0.00 0.00 3.33
535 536 0.675633 GCTCCAAACTGCCACAACAT 59.324 50.000 0.00 0.00 0.00 2.71
536 537 1.885887 GCTCCAAACTGCCACAACATA 59.114 47.619 0.00 0.00 0.00 2.29
537 538 2.095059 GCTCCAAACTGCCACAACATAG 60.095 50.000 0.00 0.00 0.00 2.23
538 539 3.149196 CTCCAAACTGCCACAACATAGT 58.851 45.455 0.00 0.00 0.00 2.12
539 540 4.323417 CTCCAAACTGCCACAACATAGTA 58.677 43.478 0.00 0.00 0.00 1.82
540 541 4.069304 TCCAAACTGCCACAACATAGTAC 58.931 43.478 0.00 0.00 0.00 2.73
541 542 4.072131 CCAAACTGCCACAACATAGTACT 58.928 43.478 0.00 0.00 0.00 2.73
542 543 4.083324 CCAAACTGCCACAACATAGTACTG 60.083 45.833 5.39 0.00 0.00 2.74
543 544 3.334583 ACTGCCACAACATAGTACTGG 57.665 47.619 5.39 0.00 0.00 4.00
544 545 2.009774 CTGCCACAACATAGTACTGGC 58.990 52.381 5.39 9.36 46.49 4.85
545 546 1.339631 TGCCACAACATAGTACTGGCC 60.340 52.381 15.19 0.00 45.86 5.36
546 547 1.339631 GCCACAACATAGTACTGGCCA 60.340 52.381 4.71 4.71 41.43 5.36
547 548 2.683742 GCCACAACATAGTACTGGCCAT 60.684 50.000 5.51 0.00 41.43 4.40
548 549 2.945008 CCACAACATAGTACTGGCCATG 59.055 50.000 5.51 2.26 0.00 3.66
549 550 3.370421 CCACAACATAGTACTGGCCATGA 60.370 47.826 5.51 0.00 0.00 3.07
550 551 4.454678 CACAACATAGTACTGGCCATGAT 58.545 43.478 5.51 0.00 0.00 2.45
551 552 4.883585 CACAACATAGTACTGGCCATGATT 59.116 41.667 5.51 0.00 0.00 2.57
552 553 6.054941 CACAACATAGTACTGGCCATGATTA 58.945 40.000 5.51 0.00 0.00 1.75
553 554 6.542005 CACAACATAGTACTGGCCATGATTAA 59.458 38.462 5.51 0.00 0.00 1.40
554 555 7.066887 CACAACATAGTACTGGCCATGATTAAA 59.933 37.037 5.51 0.00 0.00 1.52
555 556 7.779798 ACAACATAGTACTGGCCATGATTAAAT 59.220 33.333 5.51 0.00 0.00 1.40
556 557 7.750229 ACATAGTACTGGCCATGATTAAATG 57.250 36.000 5.51 7.45 0.00 2.32
557 558 6.207417 ACATAGTACTGGCCATGATTAAATGC 59.793 38.462 5.51 0.00 0.00 3.56
558 559 4.796606 AGTACTGGCCATGATTAAATGCT 58.203 39.130 5.51 0.00 0.00 3.79
559 560 5.203528 AGTACTGGCCATGATTAAATGCTT 58.796 37.500 5.51 0.00 0.00 3.91
560 561 5.658190 AGTACTGGCCATGATTAAATGCTTT 59.342 36.000 5.51 0.00 0.00 3.51
561 562 5.014808 ACTGGCCATGATTAAATGCTTTC 57.985 39.130 5.51 0.00 0.00 2.62
562 563 4.141869 ACTGGCCATGATTAAATGCTTTCC 60.142 41.667 5.51 0.00 0.00 3.13
563 564 3.134442 TGGCCATGATTAAATGCTTTCCC 59.866 43.478 0.00 0.00 0.00 3.97
564 565 3.134442 GGCCATGATTAAATGCTTTCCCA 59.866 43.478 0.00 0.00 0.00 4.37
565 566 4.202388 GGCCATGATTAAATGCTTTCCCAT 60.202 41.667 0.00 0.00 0.00 4.00
566 567 5.370679 GCCATGATTAAATGCTTTCCCATT 58.629 37.500 0.00 0.00 37.03 3.16
567 568 5.467735 GCCATGATTAAATGCTTTCCCATTC 59.532 40.000 0.00 0.00 34.50 2.67
568 569 6.584488 CCATGATTAAATGCTTTCCCATTCA 58.416 36.000 0.00 0.00 34.50 2.57
569 570 7.049133 CCATGATTAAATGCTTTCCCATTCAA 58.951 34.615 0.00 0.00 34.50 2.69
570 571 7.717875 CCATGATTAAATGCTTTCCCATTCAAT 59.282 33.333 0.00 0.00 34.50 2.57
571 572 8.770828 CATGATTAAATGCTTTCCCATTCAATC 58.229 33.333 4.55 4.55 39.04 2.67
572 573 6.979817 TGATTAAATGCTTTCCCATTCAATCG 59.020 34.615 6.38 0.00 40.41 3.34
573 574 4.806640 AAATGCTTTCCCATTCAATCGT 57.193 36.364 0.00 0.00 34.50 3.73
574 575 4.806640 AATGCTTTCCCATTCAATCGTT 57.193 36.364 0.00 0.00 29.81 3.85
575 576 4.806640 ATGCTTTCCCATTCAATCGTTT 57.193 36.364 0.00 0.00 0.00 3.60
576 577 4.173036 TGCTTTCCCATTCAATCGTTTC 57.827 40.909 0.00 0.00 0.00 2.78
577 578 3.826157 TGCTTTCCCATTCAATCGTTTCT 59.174 39.130 0.00 0.00 0.00 2.52
578 579 4.082787 TGCTTTCCCATTCAATCGTTTCTC 60.083 41.667 0.00 0.00 0.00 2.87
579 580 4.675408 GCTTTCCCATTCAATCGTTTCTCC 60.675 45.833 0.00 0.00 0.00 3.71
580 581 2.627945 TCCCATTCAATCGTTTCTCCG 58.372 47.619 0.00 0.00 0.00 4.63
581 582 2.235155 TCCCATTCAATCGTTTCTCCGA 59.765 45.455 0.00 0.00 41.73 4.55
607 608 1.229209 AGGGACTTGGAGCCGAGAA 60.229 57.895 10.74 0.00 27.25 2.87
621 622 0.391793 CGAGAAGGGGGAAGACAAGC 60.392 60.000 0.00 0.00 0.00 4.01
626 627 0.332972 AGGGGGAAGACAAGCCATTC 59.667 55.000 0.00 0.00 0.00 2.67
627 628 0.332972 GGGGGAAGACAAGCCATTCT 59.667 55.000 0.00 0.00 0.00 2.40
628 629 1.683319 GGGGGAAGACAAGCCATTCTC 60.683 57.143 0.00 0.00 0.00 2.87
629 630 1.283321 GGGGAAGACAAGCCATTCTCT 59.717 52.381 0.00 0.00 0.00 3.10
630 631 2.505819 GGGGAAGACAAGCCATTCTCTA 59.494 50.000 0.00 0.00 0.00 2.43
646 647 6.596106 CCATTCTCTACTCTAGCGCTAGAATA 59.404 42.308 38.52 33.32 41.22 1.75
673 674 3.118592 CCACAGTGGAATAACTCCCTCTC 60.119 52.174 15.35 0.00 44.69 3.20
674 675 3.108376 ACAGTGGAATAACTCCCTCTCC 58.892 50.000 0.00 0.00 44.69 3.71
675 676 2.436173 CAGTGGAATAACTCCCTCTCCC 59.564 54.545 0.00 0.00 44.69 4.30
676 677 2.319438 AGTGGAATAACTCCCTCTCCCT 59.681 50.000 0.00 0.00 44.69 4.20
677 678 2.436173 GTGGAATAACTCCCTCTCCCTG 59.564 54.545 0.00 0.00 44.69 4.45
678 679 2.045885 TGGAATAACTCCCTCTCCCTGT 59.954 50.000 0.00 0.00 44.69 4.00
679 680 2.701423 GGAATAACTCCCTCTCCCTGTC 59.299 54.545 0.00 0.00 38.44 3.51
680 681 3.631346 GGAATAACTCCCTCTCCCTGTCT 60.631 52.174 0.00 0.00 38.44 3.41
681 682 2.534042 TAACTCCCTCTCCCTGTCTG 57.466 55.000 0.00 0.00 0.00 3.51
682 683 0.787084 AACTCCCTCTCCCTGTCTGA 59.213 55.000 0.00 0.00 0.00 3.27
683 684 0.334676 ACTCCCTCTCCCTGTCTGAG 59.665 60.000 0.00 0.00 0.00 3.35
684 685 0.628522 CTCCCTCTCCCTGTCTGAGA 59.371 60.000 0.00 0.00 37.33 3.27
685 686 0.333312 TCCCTCTCCCTGTCTGAGAC 59.667 60.000 5.47 5.47 35.15 3.36
686 687 0.334676 CCCTCTCCCTGTCTGAGACT 59.665 60.000 14.42 0.00 35.15 3.24
687 688 1.684869 CCCTCTCCCTGTCTGAGACTC 60.685 61.905 14.42 0.00 35.15 3.36
712 713 2.104170 GTCTTCCTCGAACTCCCTCAT 58.896 52.381 0.00 0.00 0.00 2.90
713 714 2.100087 GTCTTCCTCGAACTCCCTCATC 59.900 54.545 0.00 0.00 0.00 2.92
714 715 2.103373 CTTCCTCGAACTCCCTCATCA 58.897 52.381 0.00 0.00 0.00 3.07
715 716 1.769026 TCCTCGAACTCCCTCATCAG 58.231 55.000 0.00 0.00 0.00 2.90
716 717 0.749649 CCTCGAACTCCCTCATCAGG 59.250 60.000 0.00 0.00 39.98 3.86
728 729 1.374125 CATCAGGTCCGCACGAACA 60.374 57.895 0.00 0.00 0.00 3.18
729 730 1.374252 ATCAGGTCCGCACGAACAC 60.374 57.895 0.00 0.00 0.00 3.32
730 731 3.403057 CAGGTCCGCACGAACACG 61.403 66.667 0.00 0.00 0.00 4.49
731 732 3.598715 AGGTCCGCACGAACACGA 61.599 61.111 0.00 0.00 0.00 4.35
748 749 1.891616 GACGACCTTCCCCTCTCAC 59.108 63.158 0.00 0.00 0.00 3.51
751 752 0.323908 CGACCTTCCCCTCTCACTCT 60.324 60.000 0.00 0.00 0.00 3.24
752 753 1.480789 GACCTTCCCCTCTCACTCTC 58.519 60.000 0.00 0.00 0.00 3.20
753 754 1.006639 GACCTTCCCCTCTCACTCTCT 59.993 57.143 0.00 0.00 0.00 3.10
754 755 1.006639 ACCTTCCCCTCTCACTCTCTC 59.993 57.143 0.00 0.00 0.00 3.20
755 756 1.006519 CCTTCCCCTCTCACTCTCTCA 59.993 57.143 0.00 0.00 0.00 3.27
756 757 2.378038 CTTCCCCTCTCACTCTCTCAG 58.622 57.143 0.00 0.00 0.00 3.35
757 758 1.675007 TCCCCTCTCACTCTCTCAGA 58.325 55.000 0.00 0.00 0.00 3.27
758 759 1.283613 TCCCCTCTCACTCTCTCAGAC 59.716 57.143 0.00 0.00 0.00 3.51
759 760 1.005332 CCCCTCTCACTCTCTCAGACA 59.995 57.143 0.00 0.00 0.00 3.41
760 761 2.091541 CCCTCTCACTCTCTCAGACAC 58.908 57.143 0.00 0.00 0.00 3.67
761 762 1.737236 CCTCTCACTCTCTCAGACACG 59.263 57.143 0.00 0.00 0.00 4.49
814 815 4.792068 GAATCCATCCAGGTAAATCCACA 58.208 43.478 0.00 0.00 39.02 4.17
819 820 3.644966 TCCAGGTAAATCCACACATCC 57.355 47.619 0.00 0.00 39.02 3.51
820 821 2.916269 TCCAGGTAAATCCACACATCCA 59.084 45.455 0.00 0.00 39.02 3.41
821 822 3.054434 TCCAGGTAAATCCACACATCCAG 60.054 47.826 0.00 0.00 39.02 3.86
840 841 0.322546 GGATCCACGCTTTCCCAGTT 60.323 55.000 6.95 0.00 0.00 3.16
943 945 7.627088 GCATGTCTTTTAGCTTAGATTTCAGCA 60.627 37.037 0.00 0.00 38.61 4.41
976 978 2.551459 ACAAGTTGCTGATGTGCTCTTC 59.449 45.455 1.81 0.00 0.00 2.87
994 1000 4.689071 TCTTCTGTTGTTTTGAGTAGCGA 58.311 39.130 0.00 0.00 0.00 4.93
1049 1055 2.670939 GAGGGAATGGGGGATTCAAAG 58.329 52.381 0.00 0.00 42.22 2.77
1060 1066 2.899900 GGGATTCAAAGCCTTGTCCTTT 59.100 45.455 5.06 0.00 34.15 3.11
1152 1158 0.981277 GGGTAGCCCTCTGGTTAGCA 60.981 60.000 0.00 0.00 44.82 3.49
1167 1173 1.731433 TAGCATACCTGTCGGCGGAC 61.731 60.000 16.90 16.90 43.71 4.79
1189 1195 0.319555 CACGGCGATATACACCCTGG 60.320 60.000 16.62 0.00 0.00 4.45
1208 1214 1.004044 GGGCCATCTATCCATCACCAG 59.996 57.143 4.39 0.00 0.00 4.00
1209 1215 1.612726 GGCCATCTATCCATCACCAGC 60.613 57.143 0.00 0.00 0.00 4.85
1210 1216 1.943046 GCCATCTATCCATCACCAGCG 60.943 57.143 0.00 0.00 0.00 5.18
1317 1323 1.153997 GCTCGAGGACAACCGTCTC 60.154 63.158 15.58 0.00 42.21 3.36
1321 1327 1.079750 GAGGACAACCGTCTCTGGC 60.080 63.158 0.00 0.00 42.21 4.85
1353 1359 0.179018 AGACCCTTGTTGTGCAGGTC 60.179 55.000 10.28 10.28 40.68 3.85
1470 1476 2.659063 CGGTGAGAGGACATGGGCA 61.659 63.158 0.00 0.00 0.00 5.36
1511 1517 0.251634 AAGAGCAGCTCTGGTAAGGC 59.748 55.000 26.09 0.00 40.28 4.35
1516 1522 1.021390 CAGCTCTGGTAAGGCGGTTG 61.021 60.000 0.00 0.00 0.00 3.77
1517 1523 1.745489 GCTCTGGTAAGGCGGTTGG 60.745 63.158 0.00 0.00 0.00 3.77
1531 1537 2.034179 GCGGTTGGCCCTTATGAATTAC 59.966 50.000 0.00 0.00 34.80 1.89
1560 1566 5.306937 ACAGGATATGGGTGACGATGAAATA 59.693 40.000 0.00 0.00 0.00 1.40
1561 1567 6.013379 ACAGGATATGGGTGACGATGAAATAT 60.013 38.462 0.00 0.00 0.00 1.28
1588 1594 4.680237 CGCACTCCCAGTTCGCCA 62.680 66.667 0.00 0.00 26.95 5.69
1649 1655 3.003173 CAAGCCCCCAGACGAGGA 61.003 66.667 0.00 0.00 0.00 3.71
1713 1719 0.252421 TGGTGGAGATGGAGCTGTCT 60.252 55.000 0.00 0.00 0.00 3.41
1833 2227 1.916697 GCTTGTTTCGGCTCAGGCTC 61.917 60.000 0.00 0.00 38.73 4.70
1834 2228 0.603707 CTTGTTTCGGCTCAGGCTCA 60.604 55.000 0.00 0.00 38.73 4.26
1850 2244 0.250381 CTCAGCAGAGGGGATCATGC 60.250 60.000 0.00 0.00 38.26 4.06
1857 2251 1.414181 AGAGGGGATCATGCGTACAAG 59.586 52.381 0.00 0.00 0.00 3.16
1862 2256 1.139058 GGATCATGCGTACAAGAGGGT 59.861 52.381 0.00 0.00 0.00 4.34
1893 2287 3.698040 CCATCTCTTACATTTTGCTGGCT 59.302 43.478 0.00 0.00 0.00 4.75
1926 2320 2.371179 CCTGGAGGTCATATCAGCATGT 59.629 50.000 0.00 0.00 37.40 3.21
1944 2338 4.310769 CATGTAGGGCAGTATTGTCTAGC 58.689 47.826 0.00 0.00 0.00 3.42
1965 2359 3.243068 GCTGGACATGTTGTTTCGTTCTT 60.243 43.478 0.00 0.00 0.00 2.52
2006 2400 3.123620 GAGCACTCGGGCTGCTTG 61.124 66.667 12.60 0.00 45.23 4.01
2007 2401 4.711949 AGCACTCGGGCTGCTTGG 62.712 66.667 6.56 0.00 42.54 3.61
2009 2403 4.711949 CACTCGGGCTGCTTGGCT 62.712 66.667 0.00 0.00 41.48 4.75
2010 2404 3.003173 ACTCGGGCTGCTTGGCTA 61.003 61.111 0.00 0.00 41.48 3.93
2011 2405 2.202987 CTCGGGCTGCTTGGCTAG 60.203 66.667 0.00 0.00 41.48 3.42
2012 2406 2.683572 TCGGGCTGCTTGGCTAGA 60.684 61.111 0.00 2.45 41.48 2.43
2013 2407 2.202987 CGGGCTGCTTGGCTAGAG 60.203 66.667 0.00 0.00 41.48 2.43
2014 2408 2.993853 GGGCTGCTTGGCTAGAGT 59.006 61.111 0.00 0.00 41.48 3.24
2015 2409 1.451028 GGGCTGCTTGGCTAGAGTG 60.451 63.158 0.00 0.00 41.48 3.51
2016 2410 1.451028 GGCTGCTTGGCTAGAGTGG 60.451 63.158 0.00 0.00 38.32 4.00
2017 2411 2.111582 GCTGCTTGGCTAGAGTGGC 61.112 63.158 0.00 0.00 0.00 5.01
2018 2412 1.601171 CTGCTTGGCTAGAGTGGCT 59.399 57.895 0.00 0.00 0.00 4.75
2019 2413 0.035630 CTGCTTGGCTAGAGTGGCTT 60.036 55.000 0.00 0.00 0.00 4.35
2020 2414 0.036010 TGCTTGGCTAGAGTGGCTTC 60.036 55.000 0.00 0.00 0.00 3.86
2021 2415 0.036010 GCTTGGCTAGAGTGGCTTCA 60.036 55.000 0.00 0.00 0.00 3.02
2022 2416 1.731720 CTTGGCTAGAGTGGCTTCAC 58.268 55.000 0.00 0.00 41.51 3.18
2035 2429 5.283457 GTGGCTTCACTATTATGTCCTCT 57.717 43.478 0.00 0.00 38.32 3.69
2036 2430 5.293560 GTGGCTTCACTATTATGTCCTCTC 58.706 45.833 0.00 0.00 38.32 3.20
2037 2431 5.069781 GTGGCTTCACTATTATGTCCTCTCT 59.930 44.000 0.00 0.00 38.32 3.10
2038 2432 5.663106 TGGCTTCACTATTATGTCCTCTCTT 59.337 40.000 0.00 0.00 0.00 2.85
2039 2433 6.183360 TGGCTTCACTATTATGTCCTCTCTTC 60.183 42.308 0.00 0.00 0.00 2.87
2040 2434 6.183360 GGCTTCACTATTATGTCCTCTCTTCA 60.183 42.308 0.00 0.00 0.00 3.02
2041 2435 6.699642 GCTTCACTATTATGTCCTCTCTTCAC 59.300 42.308 0.00 0.00 0.00 3.18
2042 2436 7.417342 GCTTCACTATTATGTCCTCTCTTCACT 60.417 40.741 0.00 0.00 0.00 3.41
2043 2437 7.962995 TCACTATTATGTCCTCTCTTCACTT 57.037 36.000 0.00 0.00 0.00 3.16
2044 2438 8.001881 TCACTATTATGTCCTCTCTTCACTTC 57.998 38.462 0.00 0.00 0.00 3.01
2045 2439 6.915300 CACTATTATGTCCTCTCTTCACTTCG 59.085 42.308 0.00 0.00 0.00 3.79
2046 2440 2.663826 ATGTCCTCTCTTCACTTCGC 57.336 50.000 0.00 0.00 0.00 4.70
2047 2441 1.328279 TGTCCTCTCTTCACTTCGCA 58.672 50.000 0.00 0.00 0.00 5.10
2048 2442 1.686587 TGTCCTCTCTTCACTTCGCAA 59.313 47.619 0.00 0.00 0.00 4.85
2049 2443 2.288457 TGTCCTCTCTTCACTTCGCAAG 60.288 50.000 0.00 0.00 0.00 4.01
2050 2444 1.074752 CCTCTCTTCACTTCGCAAGC 58.925 55.000 0.00 0.00 37.18 4.01
2051 2445 1.074752 CTCTCTTCACTTCGCAAGCC 58.925 55.000 0.00 0.00 37.18 4.35
2052 2446 0.681733 TCTCTTCACTTCGCAAGCCT 59.318 50.000 0.00 0.00 37.18 4.58
2053 2447 1.070758 TCTCTTCACTTCGCAAGCCTT 59.929 47.619 0.00 0.00 37.18 4.35
2054 2448 1.876156 CTCTTCACTTCGCAAGCCTTT 59.124 47.619 0.00 0.00 37.18 3.11
2055 2449 1.603802 TCTTCACTTCGCAAGCCTTTG 59.396 47.619 0.00 0.00 37.36 2.77
2056 2450 1.603802 CTTCACTTCGCAAGCCTTTGA 59.396 47.619 0.00 0.00 36.36 2.69
2057 2451 1.674359 TCACTTCGCAAGCCTTTGAA 58.326 45.000 0.00 0.00 36.36 2.69
2058 2452 1.603802 TCACTTCGCAAGCCTTTGAAG 59.396 47.619 12.42 12.42 42.66 3.02
2059 2453 0.312102 ACTTCGCAAGCCTTTGAAGC 59.688 50.000 13.46 0.00 41.11 3.86
2060 2454 0.387750 CTTCGCAAGCCTTTGAAGCC 60.388 55.000 3.92 0.00 36.36 4.35
2061 2455 2.126734 CGCAAGCCTTTGAAGCCG 60.127 61.111 0.00 0.00 36.36 5.52
2062 2456 2.259511 GCAAGCCTTTGAAGCCGG 59.740 61.111 0.00 0.00 36.36 6.13
2063 2457 2.259511 CAAGCCTTTGAAGCCGGC 59.740 61.111 21.89 21.89 44.09 6.13
2064 2458 2.203480 AAGCCTTTGAAGCCGGCA 60.203 55.556 31.54 4.59 46.14 5.69
2065 2459 1.832167 AAGCCTTTGAAGCCGGCAA 60.832 52.632 31.54 12.07 46.14 4.52
2066 2460 1.398958 AAGCCTTTGAAGCCGGCAAA 61.399 50.000 31.54 19.35 46.14 3.68
2067 2461 1.664649 GCCTTTGAAGCCGGCAAAC 60.665 57.895 31.54 19.20 43.25 2.93
2068 2462 1.739049 CCTTTGAAGCCGGCAAACA 59.261 52.632 31.54 21.67 32.35 2.83
2069 2463 0.318955 CCTTTGAAGCCGGCAAACAG 60.319 55.000 31.54 16.80 32.35 3.16
2070 2464 0.318955 CTTTGAAGCCGGCAAACAGG 60.319 55.000 31.54 16.19 32.35 4.00
2071 2465 0.753479 TTTGAAGCCGGCAAACAGGA 60.753 50.000 31.54 13.96 30.87 3.86
2072 2466 1.172180 TTGAAGCCGGCAAACAGGAG 61.172 55.000 31.54 0.00 0.00 3.69
2073 2467 1.302511 GAAGCCGGCAAACAGGAGA 60.303 57.895 31.54 0.00 0.00 3.71
2074 2468 1.578206 GAAGCCGGCAAACAGGAGAC 61.578 60.000 31.54 3.03 0.00 3.36
2075 2469 2.032681 GCCGGCAAACAGGAGACT 59.967 61.111 24.80 0.00 46.44 3.24
2241 2635 0.179240 CGTTGTCGATGCAGCAACTC 60.179 55.000 17.74 0.00 39.98 3.01
2268 2662 5.296780 GGGATTGCTCTTCAAAATGATACGA 59.703 40.000 0.00 0.00 38.34 3.43
2272 2666 4.631377 TGCTCTTCAAAATGATACGACAGG 59.369 41.667 0.00 0.00 0.00 4.00
2282 2676 1.940613 GATACGACAGGATGGGTTTGC 59.059 52.381 0.00 0.00 43.62 3.68
2285 2679 0.953471 CGACAGGATGGGTTTGCGAA 60.953 55.000 0.00 0.00 43.62 4.70
2339 2733 0.107017 GGCAGCTTTATCCTGGAGCA 60.107 55.000 1.52 0.00 38.85 4.26
2383 2777 1.955778 CCAAATGGACTGTGCTCAACA 59.044 47.619 0.00 0.00 37.39 3.33
2447 2841 5.331906 TGATTTGTTCATCTGGGAATCCAA 58.668 37.500 0.09 0.00 43.51 3.53
2477 2871 5.686124 GCCATGAAGTAGAGCTTATTGAGGT 60.686 44.000 0.00 0.00 37.59 3.85
2528 2922 4.662961 GCTGGTGGCAAAACCCGC 62.663 66.667 0.00 3.72 42.20 6.13
2551 2945 4.382320 TACCTGGCCGTGAACGCC 62.382 66.667 0.00 8.69 38.18 5.68
2567 2961 1.477030 CGCCGCACGGTACATCTTAC 61.477 60.000 11.27 0.00 38.44 2.34
2614 3008 2.631062 TGGCGGGTACATATCTTAGGTG 59.369 50.000 0.00 0.00 0.00 4.00
2636 3030 1.743996 GAGGACAAATCTGTGAGGGC 58.256 55.000 0.00 0.00 35.30 5.19
2655 3049 0.462759 CATCTCCCGGAAGCTGGAAC 60.463 60.000 0.73 0.00 29.82 3.62
2682 3079 6.204882 AGTGCTGTGTACTTAAGGAATTGTTC 59.795 38.462 7.53 0.00 0.00 3.18
2697 3094 2.046285 GTTCCACCATGAAGGCCCG 61.046 63.158 0.00 0.00 43.14 6.13
2714 3111 1.154205 CCGAATGGCTCCACGATCAC 61.154 60.000 0.00 0.00 0.00 3.06
2717 3114 0.904649 AATGGCTCCACGATCACTCA 59.095 50.000 0.00 0.00 0.00 3.41
2744 3141 1.448717 GGGAGAAGCTTGCCGAGAC 60.449 63.158 2.10 0.00 0.00 3.36
2749 3146 0.601311 GAAGCTTGCCGAGACACTGT 60.601 55.000 2.10 0.00 0.00 3.55
2770 3167 2.787473 TGCCAACTGGTCTTATGAGG 57.213 50.000 0.00 0.00 37.57 3.86
2771 3168 1.281867 TGCCAACTGGTCTTATGAGGG 59.718 52.381 0.00 0.00 37.57 4.30
2789 3186 0.740737 GGGGTATGTGCATGTTGCTC 59.259 55.000 0.00 0.00 45.31 4.26
2806 3203 2.174360 GCTCTTCAGGCCCTCAATTTT 58.826 47.619 0.00 0.00 0.00 1.82
2814 3211 7.721399 TCTTCAGGCCCTCAATTTTATTATCTC 59.279 37.037 0.00 0.00 0.00 2.75
2865 3262 6.827727 TGCACTAATTTTACCCCTCTATCTC 58.172 40.000 0.00 0.00 0.00 2.75
2934 3331 0.924777 CGAGTTGTACACGTGTGCAA 59.075 50.000 37.54 37.54 45.80 4.08
3103 3500 1.687612 CCATCCTGTGGCTTCTGGT 59.312 57.895 6.22 0.00 42.12 4.00
3129 3526 3.631144 CACTGGACGTACGTCTACAAAA 58.369 45.455 38.47 20.52 44.04 2.44
3172 3707 8.577939 GTGACATGTTGATCAATTGAAATTACG 58.422 33.333 21.46 1.70 0.00 3.18
3173 3708 7.754475 TGACATGTTGATCAATTGAAATTACGG 59.246 33.333 21.46 3.57 0.00 4.02
3181 3716 4.770010 TCAATTGAAATTACGGGGAGCTTT 59.230 37.500 5.45 0.00 0.00 3.51
3182 3717 4.983671 ATTGAAATTACGGGGAGCTTTC 57.016 40.909 0.00 0.00 0.00 2.62
3183 3718 3.426787 TGAAATTACGGGGAGCTTTCA 57.573 42.857 0.00 0.00 34.43 2.69
3224 3759 0.827925 TCTCCTCACGCCACTTCACT 60.828 55.000 0.00 0.00 0.00 3.41
3239 3774 6.103997 CCACTTCACTATTTTAGAGCCGTAA 58.896 40.000 0.00 0.00 0.00 3.18
3240 3775 6.035758 CCACTTCACTATTTTAGAGCCGTAAC 59.964 42.308 0.00 0.00 0.00 2.50
3259 3794 5.505819 CGTAACAAGGAGCTCGATGATCTTA 60.506 44.000 20.41 8.79 0.00 2.10
3275 3810 7.591426 CGATGATCTTACTGATGATTAACGACA 59.409 37.037 0.00 0.00 35.14 4.35
3332 3868 5.133221 AGCTCTATGTTGTGTTTCCTGTTT 58.867 37.500 0.00 0.00 0.00 2.83
3333 3869 6.296026 AGCTCTATGTTGTGTTTCCTGTTTA 58.704 36.000 0.00 0.00 0.00 2.01
3334 3870 6.942576 AGCTCTATGTTGTGTTTCCTGTTTAT 59.057 34.615 0.00 0.00 0.00 1.40
3335 3871 7.023575 GCTCTATGTTGTGTTTCCTGTTTATG 58.976 38.462 0.00 0.00 0.00 1.90
3336 3872 7.094805 GCTCTATGTTGTGTTTCCTGTTTATGA 60.095 37.037 0.00 0.00 0.00 2.15
3337 3873 8.862325 TCTATGTTGTGTTTCCTGTTTATGAT 57.138 30.769 0.00 0.00 0.00 2.45
3338 3874 9.295825 TCTATGTTGTGTTTCCTGTTTATGATT 57.704 29.630 0.00 0.00 0.00 2.57
3339 3875 9.912634 CTATGTTGTGTTTCCTGTTTATGATTT 57.087 29.630 0.00 0.00 0.00 2.17
3340 3876 8.592105 ATGTTGTGTTTCCTGTTTATGATTTG 57.408 30.769 0.00 0.00 0.00 2.32
3341 3877 6.983307 TGTTGTGTTTCCTGTTTATGATTTGG 59.017 34.615 0.00 0.00 0.00 3.28
3342 3878 6.095432 TGTGTTTCCTGTTTATGATTTGGG 57.905 37.500 0.00 0.00 0.00 4.12
3343 3879 4.929211 GTGTTTCCTGTTTATGATTTGGGC 59.071 41.667 0.00 0.00 0.00 5.36
3344 3880 4.020662 TGTTTCCTGTTTATGATTTGGGCC 60.021 41.667 0.00 0.00 0.00 5.80
3345 3881 2.374184 TCCTGTTTATGATTTGGGCCG 58.626 47.619 0.00 0.00 0.00 6.13
3346 3882 1.202405 CCTGTTTATGATTTGGGCCGC 60.202 52.381 0.00 0.00 0.00 6.53
3347 3883 0.820871 TGTTTATGATTTGGGCCGCC 59.179 50.000 0.00 0.00 0.00 6.13
3348 3884 0.820871 GTTTATGATTTGGGCCGCCA 59.179 50.000 12.58 0.00 0.00 5.69
3349 3885 1.110442 TTTATGATTTGGGCCGCCAG 58.890 50.000 12.58 0.00 0.00 4.85
3350 3886 0.033601 TTATGATTTGGGCCGCCAGT 60.034 50.000 12.58 0.00 0.00 4.00
3351 3887 0.465460 TATGATTTGGGCCGCCAGTC 60.465 55.000 12.58 3.83 0.00 3.51
3352 3888 3.140814 GATTTGGGCCGCCAGTCC 61.141 66.667 12.58 0.00 0.00 3.85
3353 3889 3.936772 GATTTGGGCCGCCAGTCCA 62.937 63.158 12.58 0.00 0.00 4.02
3354 3890 4.966787 TTTGGGCCGCCAGTCCAC 62.967 66.667 12.58 0.00 0.00 4.02
3357 3893 4.740822 GGGCCGCCAGTCCACAAT 62.741 66.667 12.58 0.00 0.00 2.71
3358 3894 2.270850 GGCCGCCAGTCCACAATA 59.729 61.111 3.91 0.00 0.00 1.90
3359 3895 1.377987 GGCCGCCAGTCCACAATAA 60.378 57.895 3.91 0.00 0.00 1.40
3360 3896 0.963355 GGCCGCCAGTCCACAATAAA 60.963 55.000 3.91 0.00 0.00 1.40
3361 3897 1.102978 GCCGCCAGTCCACAATAAAT 58.897 50.000 0.00 0.00 0.00 1.40
3362 3898 1.476488 GCCGCCAGTCCACAATAAATT 59.524 47.619 0.00 0.00 0.00 1.82
3363 3899 2.094234 GCCGCCAGTCCACAATAAATTT 60.094 45.455 0.00 0.00 0.00 1.82
3364 3900 3.510719 CCGCCAGTCCACAATAAATTTG 58.489 45.455 0.00 0.00 0.00 2.32
3365 3901 3.510719 CGCCAGTCCACAATAAATTTGG 58.489 45.455 0.00 0.00 0.00 3.28
3366 3902 3.261580 GCCAGTCCACAATAAATTTGGC 58.738 45.455 0.00 0.00 42.45 4.52
3367 3903 3.306641 GCCAGTCCACAATAAATTTGGCA 60.307 43.478 0.00 0.00 46.82 4.92
3368 3904 4.623647 GCCAGTCCACAATAAATTTGGCAT 60.624 41.667 0.00 0.00 46.82 4.40
3369 3905 5.395103 GCCAGTCCACAATAAATTTGGCATA 60.395 40.000 0.00 0.00 46.82 3.14
3370 3906 6.275335 CCAGTCCACAATAAATTTGGCATAG 58.725 40.000 0.00 0.00 0.00 2.23
3371 3907 6.096705 CCAGTCCACAATAAATTTGGCATAGA 59.903 38.462 0.00 0.00 0.00 1.98
3372 3908 7.198390 CAGTCCACAATAAATTTGGCATAGAG 58.802 38.462 0.00 0.00 0.00 2.43
3373 3909 7.067372 CAGTCCACAATAAATTTGGCATAGAGA 59.933 37.037 0.00 0.00 0.00 3.10
3374 3910 7.615365 AGTCCACAATAAATTTGGCATAGAGAA 59.385 33.333 0.00 0.00 0.00 2.87
3375 3911 8.250332 GTCCACAATAAATTTGGCATAGAGAAA 58.750 33.333 0.00 0.00 0.00 2.52
3376 3912 8.980596 TCCACAATAAATTTGGCATAGAGAAAT 58.019 29.630 0.00 0.00 0.00 2.17
3377 3913 9.603921 CCACAATAAATTTGGCATAGAGAAATT 57.396 29.630 0.00 0.00 32.01 1.82
3441 3977 8.801882 TGGTCTAGTTAGTAAAATTTCCATGG 57.198 34.615 4.97 4.97 0.00 3.66
3442 3978 8.387813 TGGTCTAGTTAGTAAAATTTCCATGGT 58.612 33.333 12.58 0.00 0.00 3.55
3443 3979 9.239551 GGTCTAGTTAGTAAAATTTCCATGGTT 57.760 33.333 12.58 0.13 0.00 3.67
3539 4075 9.941664 ATCTTTTATGAATACTGATGCTTTTCG 57.058 29.630 0.00 0.00 0.00 3.46
3618 4154 7.876936 ATCATTTGCTACTCATGTTGATCTT 57.123 32.000 0.00 0.00 0.00 2.40
3619 4155 7.692460 TCATTTGCTACTCATGTTGATCTTT 57.308 32.000 0.00 0.00 0.00 2.52
3792 4328 6.096846 AGGAACATGCTAAAGTTTCAACTGTT 59.903 34.615 0.00 0.00 39.66 3.16
3807 4343 5.636837 TCAACTGTTGTCAACAAAAGCTAC 58.363 37.500 18.68 0.00 43.36 3.58
3911 4448 6.905736 TGGATGGGCATGTTATTTACTTCTA 58.094 36.000 0.00 0.00 0.00 2.10
3919 4456 8.662141 GGCATGTTATTTACTTCTACGAAGAAA 58.338 33.333 10.32 7.01 41.19 2.52
3982 4519 1.372872 GTTGTTGGCATGCCCGTTC 60.373 57.895 33.44 19.86 35.87 3.95
4045 4583 4.398358 GTGACATAGGTGCTAGTGTGAGTA 59.602 45.833 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.866853 GCAAAGGCACCGGAAAGGAG 61.867 60.000 9.46 0.00 45.00 3.69
32 33 1.901464 GCAAAGGCACCGGAAAGGA 60.901 57.895 9.46 0.00 45.00 3.36
33 34 2.931068 GGCAAAGGCACCGGAAAGG 61.931 63.158 9.46 0.00 43.71 3.11
34 35 2.146073 CTGGCAAAGGCACCGGAAAG 62.146 60.000 9.46 0.00 43.71 2.62
35 36 2.123683 TGGCAAAGGCACCGGAAA 60.124 55.556 9.46 0.00 43.71 3.13
36 37 2.597217 CTGGCAAAGGCACCGGAA 60.597 61.111 9.46 0.00 43.71 4.30
39 40 4.047059 CTGCTGGCAAAGGCACCG 62.047 66.667 0.00 0.00 43.71 4.94
40 41 4.368543 GCTGCTGGCAAAGGCACC 62.369 66.667 0.00 0.00 43.71 5.01
41 42 4.368543 GGCTGCTGGCAAAGGCAC 62.369 66.667 12.45 5.31 43.71 5.01
45 46 4.047059 CACCGGCTGCTGGCAAAG 62.047 66.667 27.03 11.03 44.01 2.77
70 71 4.766632 GCAGCTTTGGGGAGGGGG 62.767 72.222 0.00 0.00 0.00 5.40
71 72 4.766632 GGCAGCTTTGGGGAGGGG 62.767 72.222 0.00 0.00 0.00 4.79
72 73 3.983420 TGGCAGCTTTGGGGAGGG 61.983 66.667 0.00 0.00 0.00 4.30
73 74 2.677875 GTGGCAGCTTTGGGGAGG 60.678 66.667 0.00 0.00 0.00 4.30
74 75 2.677875 GGTGGCAGCTTTGGGGAG 60.678 66.667 9.90 0.00 0.00 4.30
75 76 3.185203 AGGTGGCAGCTTTGGGGA 61.185 61.111 14.51 0.00 0.00 4.81
76 77 2.677875 GAGGTGGCAGCTTTGGGG 60.678 66.667 21.55 0.00 0.00 4.96
77 78 1.852157 TAGGAGGTGGCAGCTTTGGG 61.852 60.000 21.55 0.00 0.00 4.12
78 79 0.678048 GTAGGAGGTGGCAGCTTTGG 60.678 60.000 21.55 0.00 0.00 3.28
79 80 1.021390 CGTAGGAGGTGGCAGCTTTG 61.021 60.000 21.55 5.52 0.00 2.77
80 81 1.296715 CGTAGGAGGTGGCAGCTTT 59.703 57.895 21.55 14.40 0.00 3.51
81 82 1.889530 GACGTAGGAGGTGGCAGCTT 61.890 60.000 21.55 8.45 0.00 3.74
82 83 2.283966 ACGTAGGAGGTGGCAGCT 60.284 61.111 20.74 20.74 0.00 4.24
83 84 2.184579 GACGTAGGAGGTGGCAGC 59.815 66.667 9.02 9.02 0.00 5.25
84 85 2.490217 CGACGTAGGAGGTGGCAG 59.510 66.667 0.00 0.00 0.00 4.85
85 86 3.755628 GCGACGTAGGAGGTGGCA 61.756 66.667 0.00 0.00 37.59 4.92
86 87 4.509737 GGCGACGTAGGAGGTGGC 62.510 72.222 0.00 0.00 37.06 5.01
125 126 4.344865 TGGGAAGCTTCGGTGCCC 62.345 66.667 19.91 15.88 39.29 5.36
126 127 3.056328 GTGGGAAGCTTCGGTGCC 61.056 66.667 19.91 15.27 0.00 5.01
127 128 2.032681 AGTGGGAAGCTTCGGTGC 59.967 61.111 19.91 10.04 0.00 5.01
128 129 1.376037 GGAGTGGGAAGCTTCGGTG 60.376 63.158 19.91 0.00 0.00 4.94
129 130 2.943978 CGGAGTGGGAAGCTTCGGT 61.944 63.158 19.91 4.38 31.72 4.69
130 131 2.125512 CGGAGTGGGAAGCTTCGG 60.126 66.667 19.91 0.00 31.72 4.30
131 132 1.446272 GTCGGAGTGGGAAGCTTCG 60.446 63.158 19.91 7.71 36.37 3.79
132 133 1.446272 CGTCGGAGTGGGAAGCTTC 60.446 63.158 18.54 18.54 0.00 3.86
133 134 2.657237 CGTCGGAGTGGGAAGCTT 59.343 61.111 0.00 0.00 0.00 3.74
134 135 4.070552 GCGTCGGAGTGGGAAGCT 62.071 66.667 0.00 0.00 36.24 3.74
136 137 4.796231 CGGCGTCGGAGTGGGAAG 62.796 72.222 0.00 0.00 0.00 3.46
161 162 4.479993 CGGGGAGGCAGCTTCCTG 62.480 72.222 22.24 11.98 42.13 3.86
178 179 4.243008 GAAGGAGCTAGCCGGGGC 62.243 72.222 12.13 0.18 42.33 5.80
179 180 3.917760 CGAAGGAGCTAGCCGGGG 61.918 72.222 12.13 0.00 0.00 5.73
180 181 2.240162 AAACGAAGGAGCTAGCCGGG 62.240 60.000 12.13 0.00 0.00 5.73
181 182 1.084370 CAAACGAAGGAGCTAGCCGG 61.084 60.000 12.13 0.00 0.00 6.13
182 183 0.108804 TCAAACGAAGGAGCTAGCCG 60.109 55.000 12.13 10.01 0.00 5.52
183 184 1.337823 TGTCAAACGAAGGAGCTAGCC 60.338 52.381 12.13 2.59 0.00 3.93
184 185 1.727335 GTGTCAAACGAAGGAGCTAGC 59.273 52.381 6.62 6.62 0.00 3.42
185 186 2.338500 GGTGTCAAACGAAGGAGCTAG 58.662 52.381 0.00 0.00 0.00 3.42
186 187 1.336517 CGGTGTCAAACGAAGGAGCTA 60.337 52.381 0.00 0.00 0.00 3.32
187 188 0.600255 CGGTGTCAAACGAAGGAGCT 60.600 55.000 0.00 0.00 0.00 4.09
188 189 1.860078 CGGTGTCAAACGAAGGAGC 59.140 57.895 0.00 0.00 0.00 4.70
189 190 1.566018 GGCGGTGTCAAACGAAGGAG 61.566 60.000 0.00 0.00 0.00 3.69
190 191 1.595929 GGCGGTGTCAAACGAAGGA 60.596 57.895 0.00 0.00 0.00 3.36
191 192 2.613506 GGGCGGTGTCAAACGAAGG 61.614 63.158 0.00 0.00 0.00 3.46
192 193 1.890041 TGGGCGGTGTCAAACGAAG 60.890 57.895 0.00 0.00 0.00 3.79
193 194 2.181521 GTGGGCGGTGTCAAACGAA 61.182 57.895 0.00 0.00 0.00 3.85
194 195 2.589442 GTGGGCGGTGTCAAACGA 60.589 61.111 0.00 0.00 0.00 3.85
195 196 2.590575 AGTGGGCGGTGTCAAACG 60.591 61.111 0.00 0.00 0.00 3.60
196 197 1.782028 GACAGTGGGCGGTGTCAAAC 61.782 60.000 7.42 0.00 42.31 2.93
197 198 1.525077 GACAGTGGGCGGTGTCAAA 60.525 57.895 7.42 0.00 42.31 2.69
198 199 2.110213 GACAGTGGGCGGTGTCAA 59.890 61.111 7.42 0.00 42.31 3.18
199 200 3.936203 GGACAGTGGGCGGTGTCA 61.936 66.667 12.68 0.00 44.17 3.58
200 201 3.626924 AGGACAGTGGGCGGTGTC 61.627 66.667 0.00 4.43 42.06 3.67
201 202 3.941188 CAGGACAGTGGGCGGTGT 61.941 66.667 0.00 0.00 0.00 4.16
202 203 3.625897 TCAGGACAGTGGGCGGTG 61.626 66.667 0.00 0.00 0.00 4.94
203 204 3.626924 GTCAGGACAGTGGGCGGT 61.627 66.667 0.00 0.00 0.00 5.68
204 205 4.742201 CGTCAGGACAGTGGGCGG 62.742 72.222 0.00 0.00 0.00 6.13
207 208 4.742201 CGGCGTCAGGACAGTGGG 62.742 72.222 0.00 0.00 0.00 4.61
208 209 4.742201 CCGGCGTCAGGACAGTGG 62.742 72.222 6.01 0.00 0.00 4.00
211 212 4.457496 ATGCCGGCGTCAGGACAG 62.457 66.667 23.90 0.00 0.00 3.51
212 213 4.758251 CATGCCGGCGTCAGGACA 62.758 66.667 20.90 0.00 0.00 4.02
222 223 3.554692 GTTCGACGAGCATGCCGG 61.555 66.667 25.35 16.37 0.00 6.13
223 224 3.902063 CGTTCGACGAGCATGCCG 61.902 66.667 21.83 21.83 46.05 5.69
224 225 4.210304 GCGTTCGACGAGCATGCC 62.210 66.667 15.66 4.99 46.05 4.40
225 226 4.210304 GGCGTTCGACGAGCATGC 62.210 66.667 10.51 10.51 46.05 4.06
226 227 3.902063 CGGCGTTCGACGAGCATG 61.902 66.667 15.49 0.00 46.05 4.06
250 251 2.034687 CCTTGGACCAGGTGGCTG 59.965 66.667 0.00 0.00 39.32 4.85
251 252 1.774217 TTCCTTGGACCAGGTGGCT 60.774 57.895 0.00 0.00 39.32 4.75
252 253 1.303643 CTTCCTTGGACCAGGTGGC 60.304 63.158 0.00 0.00 39.32 5.01
253 254 1.380302 CCTTCCTTGGACCAGGTGG 59.620 63.158 0.00 3.62 42.17 4.61
254 255 1.303643 GCCTTCCTTGGACCAGGTG 60.304 63.158 0.00 0.00 35.15 4.00
255 256 2.895424 CGCCTTCCTTGGACCAGGT 61.895 63.158 2.53 0.00 35.15 4.00
256 257 2.045926 CGCCTTCCTTGGACCAGG 60.046 66.667 0.00 0.00 34.86 4.45
257 258 2.747855 GCGCCTTCCTTGGACCAG 60.748 66.667 0.00 0.00 0.00 4.00
258 259 3.565214 TGCGCCTTCCTTGGACCA 61.565 61.111 4.18 0.00 0.00 4.02
259 260 3.056328 GTGCGCCTTCCTTGGACC 61.056 66.667 4.18 0.00 0.00 4.46
260 261 3.423154 CGTGCGCCTTCCTTGGAC 61.423 66.667 4.18 0.00 0.00 4.02
261 262 3.876589 GACGTGCGCCTTCCTTGGA 62.877 63.158 4.18 0.00 0.00 3.53
262 263 3.423154 GACGTGCGCCTTCCTTGG 61.423 66.667 4.18 0.00 0.00 3.61
263 264 2.357517 AGACGTGCGCCTTCCTTG 60.358 61.111 4.18 0.00 0.00 3.61
264 265 2.048127 GAGACGTGCGCCTTCCTT 60.048 61.111 4.18 0.00 0.00 3.36
265 266 2.100879 AAAGAGACGTGCGCCTTCCT 62.101 55.000 4.18 0.00 0.00 3.36
266 267 1.668151 AAAGAGACGTGCGCCTTCC 60.668 57.895 4.18 0.00 0.00 3.46
267 268 1.222115 ACAAAGAGACGTGCGCCTTC 61.222 55.000 4.18 0.00 0.00 3.46
268 269 1.222115 GACAAAGAGACGTGCGCCTT 61.222 55.000 4.18 0.00 0.00 4.35
269 270 1.664965 GACAAAGAGACGTGCGCCT 60.665 57.895 4.18 0.00 0.00 5.52
270 271 2.853914 GACAAAGAGACGTGCGCC 59.146 61.111 4.18 0.00 0.00 6.53
271 272 2.465920 CGACAAAGAGACGTGCGC 59.534 61.111 0.00 0.00 0.00 6.09
272 273 3.000080 GCCGACAAAGAGACGTGCG 62.000 63.158 0.00 0.00 33.56 5.34
273 274 2.668280 GGCCGACAAAGAGACGTGC 61.668 63.158 0.00 0.00 33.56 5.34
274 275 1.284982 CTGGCCGACAAAGAGACGTG 61.285 60.000 0.00 0.00 33.56 4.49
275 276 1.006102 CTGGCCGACAAAGAGACGT 60.006 57.895 0.00 0.00 33.56 4.34
276 277 2.383527 GCTGGCCGACAAAGAGACG 61.384 63.158 0.00 0.00 35.18 4.18
277 278 0.603975 AAGCTGGCCGACAAAGAGAC 60.604 55.000 0.00 0.00 0.00 3.36
278 279 0.320771 GAAGCTGGCCGACAAAGAGA 60.321 55.000 0.00 0.00 0.00 3.10
279 280 0.321122 AGAAGCTGGCCGACAAAGAG 60.321 55.000 0.00 0.00 0.00 2.85
280 281 0.108585 AAGAAGCTGGCCGACAAAGA 59.891 50.000 0.00 0.00 0.00 2.52
281 282 0.519077 GAAGAAGCTGGCCGACAAAG 59.481 55.000 0.00 0.00 0.00 2.77
282 283 1.227999 CGAAGAAGCTGGCCGACAAA 61.228 55.000 0.00 0.00 0.00 2.83
283 284 1.667830 CGAAGAAGCTGGCCGACAA 60.668 57.895 0.00 0.00 0.00 3.18
284 285 2.048222 CGAAGAAGCTGGCCGACA 60.048 61.111 0.00 0.00 0.00 4.35
285 286 2.048127 ACGAAGAAGCTGGCCGAC 60.048 61.111 0.00 0.00 0.00 4.79
286 287 2.261671 GACGAAGAAGCTGGCCGA 59.738 61.111 0.00 0.00 0.00 5.54
287 288 2.890847 ATCGACGAAGAAGCTGGCCG 62.891 60.000 0.00 0.00 0.00 6.13
288 289 1.153549 ATCGACGAAGAAGCTGGCC 60.154 57.895 0.00 0.00 0.00 5.36
289 290 2.002127 CATCGACGAAGAAGCTGGC 58.998 57.895 0.00 0.00 0.00 4.85
290 291 1.424493 GGCATCGACGAAGAAGCTGG 61.424 60.000 0.00 0.00 35.44 4.85
291 292 1.424493 GGGCATCGACGAAGAAGCTG 61.424 60.000 0.00 0.00 35.44 4.24
292 293 1.153549 GGGCATCGACGAAGAAGCT 60.154 57.895 0.00 0.00 35.44 3.74
293 294 2.517450 CGGGCATCGACGAAGAAGC 61.517 63.158 0.00 4.02 42.43 3.86
294 295 2.517450 GCGGGCATCGACGAAGAAG 61.517 63.158 0.00 0.00 42.43 2.85
295 296 2.508439 GCGGGCATCGACGAAGAA 60.508 61.111 0.00 0.00 42.43 2.52
296 297 3.289704 TTGCGGGCATCGACGAAGA 62.290 57.895 0.00 0.00 42.43 2.87
297 298 2.802667 CTTGCGGGCATCGACGAAG 61.803 63.158 0.00 0.00 42.43 3.79
298 299 2.813474 CTTGCGGGCATCGACGAA 60.813 61.111 0.00 0.00 42.43 3.85
301 302 3.869272 CAGCTTGCGGGCATCGAC 61.869 66.667 2.84 0.00 42.43 4.20
302 303 3.899981 AACAGCTTGCGGGCATCGA 62.900 57.895 2.84 0.00 42.43 3.59
303 304 3.386867 GAACAGCTTGCGGGCATCG 62.387 63.158 0.00 0.00 42.76 3.84
304 305 2.486966 GAACAGCTTGCGGGCATC 59.513 61.111 0.00 0.00 34.17 3.91
305 306 3.434319 CGAACAGCTTGCGGGCAT 61.434 61.111 0.00 0.00 34.17 4.40
306 307 4.617520 TCGAACAGCTTGCGGGCA 62.618 61.111 3.66 0.00 34.17 5.36
307 308 4.090057 GTCGAACAGCTTGCGGGC 62.090 66.667 0.00 0.00 0.00 6.13
308 309 2.664851 TGTCGAACAGCTTGCGGG 60.665 61.111 0.00 0.00 0.00 6.13
309 310 2.856032 CTGTCGAACAGCTTGCGG 59.144 61.111 0.00 0.00 39.62 5.69
317 318 1.021202 CCTTGGCAAACTGTCGAACA 58.979 50.000 0.00 0.00 0.00 3.18
318 319 1.021968 ACCTTGGCAAACTGTCGAAC 58.978 50.000 0.00 0.00 0.00 3.95
319 320 2.215196 GTACCTTGGCAAACTGTCGAA 58.785 47.619 0.00 0.00 0.00 3.71
320 321 1.139256 TGTACCTTGGCAAACTGTCGA 59.861 47.619 0.00 0.00 0.00 4.20
321 322 1.588674 TGTACCTTGGCAAACTGTCG 58.411 50.000 0.00 0.00 0.00 4.35
322 323 4.379339 TTTTGTACCTTGGCAAACTGTC 57.621 40.909 0.00 0.00 34.77 3.51
323 324 4.404073 TCATTTTGTACCTTGGCAAACTGT 59.596 37.500 0.00 1.67 36.92 3.55
324 325 4.942852 TCATTTTGTACCTTGGCAAACTG 58.057 39.130 0.00 0.00 36.92 3.16
325 326 4.649218 ACTCATTTTGTACCTTGGCAAACT 59.351 37.500 0.00 0.00 34.77 2.66
326 327 4.944048 ACTCATTTTGTACCTTGGCAAAC 58.056 39.130 0.00 0.00 34.77 2.93
327 328 4.261405 CGACTCATTTTGTACCTTGGCAAA 60.261 41.667 0.00 0.00 33.40 3.68
328 329 3.252215 CGACTCATTTTGTACCTTGGCAA 59.748 43.478 0.00 0.00 0.00 4.52
329 330 2.811431 CGACTCATTTTGTACCTTGGCA 59.189 45.455 0.00 0.00 0.00 4.92
330 331 3.071479 TCGACTCATTTTGTACCTTGGC 58.929 45.455 0.00 0.00 0.00 4.52
331 332 3.122948 CGTCGACTCATTTTGTACCTTGG 59.877 47.826 14.70 0.00 0.00 3.61
332 333 3.423123 GCGTCGACTCATTTTGTACCTTG 60.423 47.826 14.70 0.00 0.00 3.61
333 334 2.735134 GCGTCGACTCATTTTGTACCTT 59.265 45.455 14.70 0.00 0.00 3.50
334 335 2.334838 GCGTCGACTCATTTTGTACCT 58.665 47.619 14.70 0.00 0.00 3.08
335 336 1.058695 CGCGTCGACTCATTTTGTACC 59.941 52.381 14.70 0.00 0.00 3.34
336 337 1.717645 ACGCGTCGACTCATTTTGTAC 59.282 47.619 14.70 0.00 0.00 2.90
337 338 2.054687 ACGCGTCGACTCATTTTGTA 57.945 45.000 14.70 0.00 0.00 2.41
338 339 1.070843 CAACGCGTCGACTCATTTTGT 60.071 47.619 14.44 0.00 0.00 2.83
339 340 1.580439 CAACGCGTCGACTCATTTTG 58.420 50.000 14.44 0.00 0.00 2.44
340 341 0.511221 CCAACGCGTCGACTCATTTT 59.489 50.000 14.44 0.00 0.00 1.82
341 342 1.289109 CCCAACGCGTCGACTCATTT 61.289 55.000 14.44 0.00 0.00 2.32
342 343 1.736645 CCCAACGCGTCGACTCATT 60.737 57.895 14.44 0.00 0.00 2.57
343 344 2.126071 CCCAACGCGTCGACTCAT 60.126 61.111 14.44 0.00 0.00 2.90
344 345 4.351938 CCCCAACGCGTCGACTCA 62.352 66.667 14.44 0.00 0.00 3.41
360 361 2.676471 ATTTGGGTCGGCAGTGCC 60.676 61.111 25.07 25.07 46.75 5.01
361 362 1.315257 ATGATTTGGGTCGGCAGTGC 61.315 55.000 6.55 6.55 0.00 4.40
362 363 2.036958 TATGATTTGGGTCGGCAGTG 57.963 50.000 0.00 0.00 0.00 3.66
363 364 2.799126 TTATGATTTGGGTCGGCAGT 57.201 45.000 0.00 0.00 0.00 4.40
364 365 4.216257 CCTATTTATGATTTGGGTCGGCAG 59.784 45.833 0.00 0.00 0.00 4.85
365 366 4.141287 CCTATTTATGATTTGGGTCGGCA 58.859 43.478 0.00 0.00 0.00 5.69
366 367 3.506067 CCCTATTTATGATTTGGGTCGGC 59.494 47.826 0.00 0.00 0.00 5.54
367 368 3.506067 GCCCTATTTATGATTTGGGTCGG 59.494 47.826 0.00 0.00 37.09 4.79
368 369 3.188460 CGCCCTATTTATGATTTGGGTCG 59.812 47.826 0.00 0.00 37.09 4.79
369 370 3.506067 CCGCCCTATTTATGATTTGGGTC 59.494 47.826 0.00 0.00 37.09 4.46
370 371 3.139397 TCCGCCCTATTTATGATTTGGGT 59.861 43.478 0.00 0.00 37.09 4.51
371 372 3.506067 GTCCGCCCTATTTATGATTTGGG 59.494 47.826 0.00 0.00 37.76 4.12
372 373 3.188460 CGTCCGCCCTATTTATGATTTGG 59.812 47.826 0.00 0.00 0.00 3.28
373 374 3.364964 GCGTCCGCCCTATTTATGATTTG 60.365 47.826 0.00 0.00 34.56 2.32
374 375 2.812011 GCGTCCGCCCTATTTATGATTT 59.188 45.455 0.00 0.00 34.56 2.17
375 376 2.423577 GCGTCCGCCCTATTTATGATT 58.576 47.619 0.00 0.00 34.56 2.57
376 377 2.094762 GCGTCCGCCCTATTTATGAT 57.905 50.000 0.00 0.00 34.56 2.45
377 378 3.599412 GCGTCCGCCCTATTTATGA 57.401 52.632 0.00 0.00 34.56 2.15
397 398 3.842925 TTGGGTTGGCCACTCGCTC 62.843 63.158 3.88 0.00 37.74 5.03
398 399 3.429372 TTTGGGTTGGCCACTCGCT 62.429 57.895 3.88 0.00 37.74 4.93
399 400 2.909965 TTTGGGTTGGCCACTCGC 60.910 61.111 3.88 11.20 36.17 5.03
400 401 2.903547 CGTTTGGGTTGGCCACTCG 61.904 63.158 3.88 0.00 36.17 4.18
401 402 2.561037 CCGTTTGGGTTGGCCACTC 61.561 63.158 3.88 0.62 36.17 3.51
402 403 2.520741 CCGTTTGGGTTGGCCACT 60.521 61.111 3.88 0.00 36.17 4.00
403 404 4.293648 GCCGTTTGGGTTGGCCAC 62.294 66.667 3.88 0.00 43.06 5.01
407 408 0.031994 CTTTCTGCCGTTTGGGTTGG 59.968 55.000 0.00 0.00 38.44 3.77
408 409 0.597377 GCTTTCTGCCGTTTGGGTTG 60.597 55.000 0.00 0.00 38.44 3.77
409 410 1.739667 GCTTTCTGCCGTTTGGGTT 59.260 52.632 0.00 0.00 38.44 4.11
410 411 2.551912 CGCTTTCTGCCGTTTGGGT 61.552 57.895 0.00 0.00 38.78 4.51
411 412 2.255252 CGCTTTCTGCCGTTTGGG 59.745 61.111 0.00 0.00 38.78 4.12
412 413 2.255252 CCGCTTTCTGCCGTTTGG 59.745 61.111 0.00 0.00 38.78 3.28
413 414 1.082104 GTCCGCTTTCTGCCGTTTG 60.082 57.895 0.00 0.00 38.78 2.93
414 415 1.098712 TTGTCCGCTTTCTGCCGTTT 61.099 50.000 0.00 0.00 38.78 3.60
415 416 1.098712 TTTGTCCGCTTTCTGCCGTT 61.099 50.000 0.00 0.00 38.78 4.44
416 417 1.098712 TTTTGTCCGCTTTCTGCCGT 61.099 50.000 0.00 0.00 38.78 5.68
417 418 0.240945 ATTTTGTCCGCTTTCTGCCG 59.759 50.000 0.00 0.00 38.78 5.69
418 419 1.729149 CGATTTTGTCCGCTTTCTGCC 60.729 52.381 0.00 0.00 38.78 4.85
419 420 1.606606 CGATTTTGTCCGCTTTCTGC 58.393 50.000 0.00 0.00 38.57 4.26
420 421 1.606606 GCGATTTTGTCCGCTTTCTG 58.393 50.000 0.00 0.00 46.96 3.02
428 429 0.236449 AACGAACGGCGATTTTGTCC 59.764 50.000 16.62 0.00 44.57 4.02
429 430 1.706597 CAAACGAACGGCGATTTTGTC 59.293 47.619 16.62 0.00 44.57 3.18
430 431 1.598430 CCAAACGAACGGCGATTTTGT 60.598 47.619 16.62 5.48 44.57 2.83
431 432 1.049251 CCAAACGAACGGCGATTTTG 58.951 50.000 16.62 15.66 44.57 2.44
432 433 0.039888 CCCAAACGAACGGCGATTTT 60.040 50.000 16.62 0.00 44.57 1.82
433 434 1.167781 ACCCAAACGAACGGCGATTT 61.168 50.000 16.62 5.62 44.57 2.17
434 435 1.571215 GACCCAAACGAACGGCGATT 61.571 55.000 16.62 3.78 44.57 3.34
435 436 2.030958 GACCCAAACGAACGGCGAT 61.031 57.895 16.62 0.00 44.57 4.58
436 437 2.662527 GACCCAAACGAACGGCGA 60.663 61.111 16.62 0.00 44.57 5.54
438 439 3.719144 CCGACCCAAACGAACGGC 61.719 66.667 0.00 0.00 37.32 5.68
439 440 3.719144 GCCGACCCAAACGAACGG 61.719 66.667 0.00 0.00 45.26 4.44
440 441 4.067016 CGCCGACCCAAACGAACG 62.067 66.667 0.00 0.00 0.00 3.95
441 442 4.379143 GCGCCGACCCAAACGAAC 62.379 66.667 0.00 0.00 0.00 3.95
442 443 4.912485 TGCGCCGACCCAAACGAA 62.912 61.111 4.18 0.00 0.00 3.85
443 444 4.690719 ATGCGCCGACCCAAACGA 62.691 61.111 4.18 0.00 0.00 3.85
444 445 3.732892 AATGCGCCGACCCAAACG 61.733 61.111 4.18 0.00 0.00 3.60
445 446 2.126502 CAATGCGCCGACCCAAAC 60.127 61.111 4.18 0.00 0.00 2.93
446 447 3.369400 CCAATGCGCCGACCCAAA 61.369 61.111 4.18 0.00 0.00 3.28
447 448 4.337177 TCCAATGCGCCGACCCAA 62.337 61.111 4.18 0.00 0.00 4.12
448 449 4.776322 CTCCAATGCGCCGACCCA 62.776 66.667 4.18 0.00 0.00 4.51
449 450 4.778143 ACTCCAATGCGCCGACCC 62.778 66.667 4.18 0.00 0.00 4.46
450 451 2.746277 AACTCCAATGCGCCGACC 60.746 61.111 4.18 0.00 0.00 4.79
451 452 2.480555 CAACTCCAATGCGCCGAC 59.519 61.111 4.18 0.00 0.00 4.79
452 453 3.430862 GCAACTCCAATGCGCCGA 61.431 61.111 4.18 0.00 33.57 5.54
457 458 3.065925 GGTGATAAGAGCAACTCCAATGC 59.934 47.826 0.00 0.00 44.15 3.56
458 459 4.264253 TGGTGATAAGAGCAACTCCAATG 58.736 43.478 0.00 0.00 0.00 2.82
459 460 4.521146 CTGGTGATAAGAGCAACTCCAAT 58.479 43.478 0.00 0.00 0.00 3.16
460 461 3.869912 GCTGGTGATAAGAGCAACTCCAA 60.870 47.826 0.00 0.00 32.70 3.53
461 462 2.355108 GCTGGTGATAAGAGCAACTCCA 60.355 50.000 0.00 0.00 32.70 3.86
462 463 2.284190 GCTGGTGATAAGAGCAACTCC 58.716 52.381 0.00 0.00 32.70 3.85
463 464 1.929836 CGCTGGTGATAAGAGCAACTC 59.070 52.381 0.00 0.00 32.70 3.01
464 465 1.276421 ACGCTGGTGATAAGAGCAACT 59.724 47.619 0.00 0.00 32.70 3.16
465 466 1.661112 GACGCTGGTGATAAGAGCAAC 59.339 52.381 0.00 0.00 32.70 4.17
466 467 1.405526 GGACGCTGGTGATAAGAGCAA 60.406 52.381 0.00 0.00 32.70 3.91
467 468 0.175760 GGACGCTGGTGATAAGAGCA 59.824 55.000 0.00 0.00 32.70 4.26
468 469 0.175760 TGGACGCTGGTGATAAGAGC 59.824 55.000 0.00 0.00 0.00 4.09
469 470 2.672961 TTGGACGCTGGTGATAAGAG 57.327 50.000 0.00 0.00 0.00 2.85
470 471 3.627395 AATTGGACGCTGGTGATAAGA 57.373 42.857 0.00 0.00 0.00 2.10
471 472 4.701956 AAAATTGGACGCTGGTGATAAG 57.298 40.909 0.00 0.00 0.00 1.73
472 473 6.405286 CCAATAAAATTGGACGCTGGTGATAA 60.405 38.462 12.41 0.00 42.06 1.75
473 474 5.067153 CCAATAAAATTGGACGCTGGTGATA 59.933 40.000 12.41 0.00 42.06 2.15
474 475 4.142182 CCAATAAAATTGGACGCTGGTGAT 60.142 41.667 12.41 0.00 42.06 3.06
475 476 3.192422 CCAATAAAATTGGACGCTGGTGA 59.808 43.478 12.41 0.00 42.06 4.02
476 477 3.510719 CCAATAAAATTGGACGCTGGTG 58.489 45.455 12.41 0.00 42.06 4.17
477 478 2.495669 CCCAATAAAATTGGACGCTGGT 59.504 45.455 18.18 0.00 42.06 4.00
478 479 2.495669 ACCCAATAAAATTGGACGCTGG 59.504 45.455 18.18 4.92 42.06 4.85
479 480 3.510719 CACCCAATAAAATTGGACGCTG 58.489 45.455 18.18 5.53 42.06 5.18
480 481 2.495669 CCACCCAATAAAATTGGACGCT 59.504 45.455 18.18 0.00 42.06 5.07
481 482 2.418060 CCCACCCAATAAAATTGGACGC 60.418 50.000 18.18 0.00 42.06 5.19
482 483 2.829120 ACCCACCCAATAAAATTGGACG 59.171 45.455 18.18 9.44 42.06 4.79
483 484 3.196901 GGACCCACCCAATAAAATTGGAC 59.803 47.826 18.18 4.61 42.06 4.02
484 485 3.445987 GGACCCACCCAATAAAATTGGA 58.554 45.455 18.18 0.00 42.06 3.53
485 486 3.904800 GGACCCACCCAATAAAATTGG 57.095 47.619 11.05 11.05 39.25 3.16
499 500 2.435663 CATGTGCTGTGGGACCCA 59.564 61.111 9.95 9.95 32.62 4.51
500 501 3.064324 GCATGTGCTGTGGGACCC 61.064 66.667 2.45 2.45 38.21 4.46
510 511 1.080298 GGCAGTTTGGAGCATGTGC 60.080 57.895 0.00 0.00 42.49 4.57
511 512 0.038892 GTGGCAGTTTGGAGCATGTG 60.039 55.000 0.00 0.00 0.00 3.21
512 513 0.467844 TGTGGCAGTTTGGAGCATGT 60.468 50.000 0.00 0.00 0.00 3.21
513 514 0.675083 TTGTGGCAGTTTGGAGCATG 59.325 50.000 0.00 0.00 0.00 4.06
514 515 0.675633 GTTGTGGCAGTTTGGAGCAT 59.324 50.000 0.00 0.00 0.00 3.79
515 516 0.682532 TGTTGTGGCAGTTTGGAGCA 60.683 50.000 0.00 0.00 0.00 4.26
516 517 0.675633 ATGTTGTGGCAGTTTGGAGC 59.324 50.000 0.00 0.00 0.00 4.70
517 518 3.149196 ACTATGTTGTGGCAGTTTGGAG 58.851 45.455 0.00 0.00 0.00 3.86
518 519 3.222173 ACTATGTTGTGGCAGTTTGGA 57.778 42.857 0.00 0.00 0.00 3.53
519 520 4.072131 AGTACTATGTTGTGGCAGTTTGG 58.928 43.478 0.00 0.00 0.00 3.28
520 521 4.083324 CCAGTACTATGTTGTGGCAGTTTG 60.083 45.833 0.00 0.00 0.00 2.93
521 522 4.072131 CCAGTACTATGTTGTGGCAGTTT 58.928 43.478 0.00 0.00 0.00 2.66
522 523 3.674997 CCAGTACTATGTTGTGGCAGTT 58.325 45.455 0.00 0.00 0.00 3.16
523 524 3.334583 CCAGTACTATGTTGTGGCAGT 57.665 47.619 0.00 0.00 0.00 4.40
527 528 2.779755 TGGCCAGTACTATGTTGTGG 57.220 50.000 0.00 0.00 0.00 4.17
528 529 3.872696 TCATGGCCAGTACTATGTTGTG 58.127 45.455 13.05 0.00 0.00 3.33
529 530 4.778213 ATCATGGCCAGTACTATGTTGT 57.222 40.909 13.05 0.00 0.00 3.32
530 531 7.566760 TTTAATCATGGCCAGTACTATGTTG 57.433 36.000 13.05 0.34 0.00 3.33
531 532 7.255590 GCATTTAATCATGGCCAGTACTATGTT 60.256 37.037 13.05 3.54 0.00 2.71
532 533 6.207417 GCATTTAATCATGGCCAGTACTATGT 59.793 38.462 13.05 0.00 0.00 2.29
533 534 6.432162 AGCATTTAATCATGGCCAGTACTATG 59.568 38.462 13.05 2.97 0.00 2.23
534 535 6.546484 AGCATTTAATCATGGCCAGTACTAT 58.454 36.000 13.05 0.00 0.00 2.12
535 536 5.940617 AGCATTTAATCATGGCCAGTACTA 58.059 37.500 13.05 0.00 0.00 1.82
536 537 4.796606 AGCATTTAATCATGGCCAGTACT 58.203 39.130 13.05 0.00 0.00 2.73
537 538 5.520376 AAGCATTTAATCATGGCCAGTAC 57.480 39.130 13.05 0.00 0.00 2.73
538 539 5.068987 GGAAAGCATTTAATCATGGCCAGTA 59.931 40.000 13.05 0.91 39.27 2.74
539 540 4.141869 GGAAAGCATTTAATCATGGCCAGT 60.142 41.667 13.05 0.00 39.27 4.00
540 541 4.374399 GGAAAGCATTTAATCATGGCCAG 58.626 43.478 13.05 3.43 39.27 4.85
541 542 3.134442 GGGAAAGCATTTAATCATGGCCA 59.866 43.478 8.56 8.56 39.27 5.36
542 543 3.134442 TGGGAAAGCATTTAATCATGGCC 59.866 43.478 0.00 0.00 39.27 5.36
543 544 4.405116 TGGGAAAGCATTTAATCATGGC 57.595 40.909 0.00 0.00 39.27 4.40
544 545 6.584488 TGAATGGGAAAGCATTTAATCATGG 58.416 36.000 0.00 0.00 39.27 3.66
545 546 8.671384 ATTGAATGGGAAAGCATTTAATCATG 57.329 30.769 0.00 0.00 39.27 3.07
546 547 7.654520 CGATTGAATGGGAAAGCATTTAATCAT 59.345 33.333 9.29 0.00 40.62 2.45
547 548 6.979817 CGATTGAATGGGAAAGCATTTAATCA 59.020 34.615 9.29 0.00 40.62 2.57
548 549 6.980397 ACGATTGAATGGGAAAGCATTTAATC 59.020 34.615 3.67 3.67 39.27 1.75
549 550 6.877236 ACGATTGAATGGGAAAGCATTTAAT 58.123 32.000 0.00 0.00 39.27 1.40
550 551 6.279513 ACGATTGAATGGGAAAGCATTTAA 57.720 33.333 0.00 0.00 39.27 1.52
551 552 5.913137 ACGATTGAATGGGAAAGCATTTA 57.087 34.783 0.00 0.00 39.27 1.40
552 553 4.806640 ACGATTGAATGGGAAAGCATTT 57.193 36.364 0.00 0.00 43.98 2.32
553 554 4.806640 AACGATTGAATGGGAAAGCATT 57.193 36.364 0.00 0.00 0.00 3.56
554 555 4.463891 AGAAACGATTGAATGGGAAAGCAT 59.536 37.500 0.00 0.00 0.00 3.79
555 556 3.826157 AGAAACGATTGAATGGGAAAGCA 59.174 39.130 0.00 0.00 0.00 3.91
556 557 4.415735 GAGAAACGATTGAATGGGAAAGC 58.584 43.478 0.00 0.00 0.00 3.51
557 558 4.437390 CGGAGAAACGATTGAATGGGAAAG 60.437 45.833 0.00 0.00 35.47 2.62
558 559 3.438781 CGGAGAAACGATTGAATGGGAAA 59.561 43.478 0.00 0.00 35.47 3.13
559 560 3.006940 CGGAGAAACGATTGAATGGGAA 58.993 45.455 0.00 0.00 35.47 3.97
560 561 2.235155 TCGGAGAAACGATTGAATGGGA 59.765 45.455 0.00 0.00 38.06 4.37
561 562 2.627945 TCGGAGAAACGATTGAATGGG 58.372 47.619 0.00 0.00 38.06 4.00
571 572 2.480416 CCCTCTCTTGATCGGAGAAACG 60.480 54.545 15.75 7.54 43.58 3.60
572 573 2.761208 TCCCTCTCTTGATCGGAGAAAC 59.239 50.000 15.75 0.00 43.58 2.78
573 574 2.761208 GTCCCTCTCTTGATCGGAGAAA 59.239 50.000 15.75 5.68 43.58 2.52
574 575 2.024846 AGTCCCTCTCTTGATCGGAGAA 60.025 50.000 15.75 3.19 43.58 2.87
575 576 1.566703 AGTCCCTCTCTTGATCGGAGA 59.433 52.381 14.66 14.66 45.75 3.71
576 577 2.065899 AGTCCCTCTCTTGATCGGAG 57.934 55.000 8.64 8.64 0.00 4.63
577 578 2.103373 CAAGTCCCTCTCTTGATCGGA 58.897 52.381 0.00 0.00 43.17 4.55
578 579 1.137872 CCAAGTCCCTCTCTTGATCGG 59.862 57.143 7.16 0.00 43.17 4.18
579 580 2.100584 CTCCAAGTCCCTCTCTTGATCG 59.899 54.545 7.16 0.00 43.17 3.69
580 581 2.158971 GCTCCAAGTCCCTCTCTTGATC 60.159 54.545 7.16 0.00 43.17 2.92
581 582 1.836802 GCTCCAAGTCCCTCTCTTGAT 59.163 52.381 7.16 0.00 43.17 2.57
607 608 0.332972 GAATGGCTTGTCTTCCCCCT 59.667 55.000 0.00 0.00 0.00 4.79
621 622 4.320023 TCTAGCGCTAGAGTAGAGAATGG 58.680 47.826 37.07 13.30 37.28 3.16
626 627 7.360607 GGAAGTTATTCTAGCGCTAGAGTAGAG 60.361 44.444 37.59 19.30 42.50 2.43
627 628 6.427547 GGAAGTTATTCTAGCGCTAGAGTAGA 59.572 42.308 37.59 27.42 42.50 2.59
628 629 6.205076 TGGAAGTTATTCTAGCGCTAGAGTAG 59.795 42.308 37.59 20.70 42.50 2.57
629 630 6.017275 GTGGAAGTTATTCTAGCGCTAGAGTA 60.017 42.308 37.59 35.42 42.50 2.59
630 631 4.888239 TGGAAGTTATTCTAGCGCTAGAGT 59.112 41.667 37.59 36.37 42.50 3.24
661 662 2.587777 TCAGACAGGGAGAGGGAGTTAT 59.412 50.000 0.00 0.00 0.00 1.89
663 664 0.787084 TCAGACAGGGAGAGGGAGTT 59.213 55.000 0.00 0.00 0.00 3.01
673 674 0.975040 CAGGGGAGTCTCAGACAGGG 60.975 65.000 7.77 0.00 34.60 4.45
674 675 0.252012 ACAGGGGAGTCTCAGACAGG 60.252 60.000 7.77 0.00 34.60 4.00
675 676 1.181786 GACAGGGGAGTCTCAGACAG 58.818 60.000 7.77 0.00 34.60 3.51
676 677 0.780637 AGACAGGGGAGTCTCAGACA 59.219 55.000 7.77 0.00 45.35 3.41
677 678 3.681909 AGACAGGGGAGTCTCAGAC 57.318 57.895 0.00 0.00 45.35 3.51
683 684 0.323542 TCGAGGAAGACAGGGGAGTC 60.324 60.000 0.00 0.00 38.81 3.36
684 685 0.114560 TTCGAGGAAGACAGGGGAGT 59.885 55.000 0.00 0.00 0.00 3.85
685 686 0.533032 GTTCGAGGAAGACAGGGGAG 59.467 60.000 0.00 0.00 0.00 4.30
686 687 0.114560 AGTTCGAGGAAGACAGGGGA 59.885 55.000 0.00 0.00 0.00 4.81
687 688 0.533032 GAGTTCGAGGAAGACAGGGG 59.467 60.000 0.00 0.00 0.00 4.79
712 713 2.028484 GTGTTCGTGCGGACCTGA 59.972 61.111 0.00 0.00 0.00 3.86
713 714 3.403057 CGTGTTCGTGCGGACCTG 61.403 66.667 0.00 0.00 0.00 4.00
714 715 3.598715 TCGTGTTCGTGCGGACCT 61.599 61.111 0.00 0.00 38.33 3.85
715 716 3.400590 GTCGTGTTCGTGCGGACC 61.401 66.667 0.00 0.00 38.33 4.46
716 717 3.749373 CGTCGTGTTCGTGCGGAC 61.749 66.667 0.00 0.00 38.33 4.79
728 729 1.678300 GAGAGGGGAAGGTCGTCGT 60.678 63.158 0.00 0.00 0.00 4.34
729 730 1.677966 TGAGAGGGGAAGGTCGTCG 60.678 63.158 0.00 0.00 0.00 5.12
730 731 0.612453 AGTGAGAGGGGAAGGTCGTC 60.612 60.000 0.00 0.00 0.00 4.20
731 732 0.612453 GAGTGAGAGGGGAAGGTCGT 60.612 60.000 0.00 0.00 0.00 4.34
748 749 0.179166 GCTGCTCGTGTCTGAGAGAG 60.179 60.000 0.00 0.00 38.28 3.20
751 752 1.966451 TCGCTGCTCGTGTCTGAGA 60.966 57.895 0.00 0.00 38.28 3.27
752 753 1.799519 GTCGCTGCTCGTGTCTGAG 60.800 63.158 0.00 0.00 39.67 3.35
753 754 2.255554 GTCGCTGCTCGTGTCTGA 59.744 61.111 0.00 0.00 39.67 3.27
754 755 3.168604 CGTCGCTGCTCGTGTCTG 61.169 66.667 0.00 0.00 39.67 3.51
755 756 4.406173 CCGTCGCTGCTCGTGTCT 62.406 66.667 11.60 0.00 39.67 3.41
760 761 4.717629 TTGTCCCGTCGCTGCTCG 62.718 66.667 0.00 2.59 40.15 5.03
761 762 3.112709 GTTGTCCCGTCGCTGCTC 61.113 66.667 0.00 0.00 0.00 4.26
809 810 0.911769 GTGGATCCTGGATGTGTGGA 59.088 55.000 15.25 0.00 0.00 4.02
814 815 0.620556 AAAGCGTGGATCCTGGATGT 59.379 50.000 15.25 0.00 0.00 3.06
819 820 0.745845 CTGGGAAAGCGTGGATCCTG 60.746 60.000 14.23 6.76 33.61 3.86
820 821 1.201429 ACTGGGAAAGCGTGGATCCT 61.201 55.000 14.23 0.00 33.61 3.24
821 822 0.322546 AACTGGGAAAGCGTGGATCC 60.323 55.000 4.20 4.20 0.00 3.36
859 860 5.251601 AGAATGAAACGAGACCTAGCTAC 57.748 43.478 0.00 0.00 0.00 3.58
886 887 2.334946 GCATGGAAGTTCGCTGGCA 61.335 57.895 0.00 0.00 0.00 4.92
887 888 1.986575 GAGCATGGAAGTTCGCTGGC 61.987 60.000 8.28 4.32 34.12 4.85
889 890 1.396301 GAAGAGCATGGAAGTTCGCTG 59.604 52.381 8.28 4.11 34.12 5.18
891 892 1.442769 TGAAGAGCATGGAAGTTCGC 58.557 50.000 0.00 0.00 0.00 4.70
943 945 1.076044 AACTTGTGCCAACCAGCCT 60.076 52.632 0.00 0.00 0.00 4.58
976 978 2.480419 CCCTCGCTACTCAAAACAACAG 59.520 50.000 0.00 0.00 0.00 3.16
1022 1028 0.995675 CCCCCATTCCCTCCACAGAT 60.996 60.000 0.00 0.00 0.00 2.90
1049 1055 1.068954 CGAAGCTCAAAAGGACAAGGC 60.069 52.381 0.00 0.00 0.00 4.35
1080 1086 1.749638 TCCGAAGACGAGGAGGAGC 60.750 63.158 0.00 0.00 42.66 4.70
1152 1158 2.125961 GGAGTCCGCCGACAGGTAT 61.126 63.158 7.93 0.00 41.87 2.73
1167 1173 0.038526 GGGTGTATATCGCCGTGGAG 60.039 60.000 0.00 0.00 46.82 3.86
1189 1195 1.612726 GCTGGTGATGGATAGATGGCC 60.613 57.143 0.00 0.00 0.00 5.36
1353 1359 1.211457 AGGACATAAGCAGCTCCAAGG 59.789 52.381 0.00 0.00 0.00 3.61
1470 1476 2.108157 TCGTTGGCACGCTTGAGT 59.892 55.556 0.00 0.00 46.70 3.41
1511 1517 3.315191 CAGTAATTCATAAGGGCCAACCG 59.685 47.826 6.18 0.00 46.96 4.44
1516 1522 5.036117 TGTCTCAGTAATTCATAAGGGCC 57.964 43.478 0.00 0.00 0.00 5.80
1517 1523 5.059833 CCTGTCTCAGTAATTCATAAGGGC 58.940 45.833 0.00 0.00 0.00 5.19
1531 1537 2.035193 CGTCACCCATATCCTGTCTCAG 59.965 54.545 0.00 0.00 0.00 3.35
1560 1566 2.510238 GAGTGCGCTCGGAGCAAT 60.510 61.111 27.83 11.16 46.97 3.56
1561 1567 4.742201 GGAGTGCGCTCGGAGCAA 62.742 66.667 27.83 13.88 46.97 3.91
1588 1594 1.448540 CGAAGCCGGACTTGCAGAT 60.449 57.895 5.05 0.00 39.29 2.90
1649 1655 4.284746 AGAAAGGAAAGAGACGAGGTGAAT 59.715 41.667 0.00 0.00 0.00 2.57
1664 1670 9.309224 TGAATATATCCTCGTCATAGAAAGGAA 57.691 33.333 0.00 0.00 41.10 3.36
1665 1671 8.879427 TGAATATATCCTCGTCATAGAAAGGA 57.121 34.615 0.00 0.00 41.93 3.36
1713 1719 3.816523 TGTACAGTGTGTCGTACATCAGA 59.183 43.478 5.88 0.00 42.22 3.27
1767 2161 2.806818 CGAGATGGAATGGATGCAGAAG 59.193 50.000 0.00 0.00 30.55 2.85
1833 2227 1.597302 CGCATGATCCCCTCTGCTG 60.597 63.158 0.00 0.00 32.48 4.41
1834 2228 0.760567 TACGCATGATCCCCTCTGCT 60.761 55.000 0.00 0.00 32.48 4.24
1850 2244 3.004524 GGCTACATCTACCCTCTTGTACG 59.995 52.174 0.00 0.00 0.00 3.67
1893 2287 2.451493 TCCAGGACCAAAGCCCCA 60.451 61.111 0.00 0.00 0.00 4.96
1926 2320 2.965831 CCAGCTAGACAATACTGCCCTA 59.034 50.000 0.00 0.00 0.00 3.53
1944 2338 4.527564 GAAGAACGAAACAACATGTCCAG 58.472 43.478 0.00 0.00 0.00 3.86
1965 2359 1.136305 CTGTAATCCTCCGCCTTTCGA 59.864 52.381 0.00 0.00 41.67 3.71
1968 2362 0.462047 CGCTGTAATCCTCCGCCTTT 60.462 55.000 0.00 0.00 0.00 3.11
1996 2390 2.202987 CTCTAGCCAAGCAGCCCG 60.203 66.667 0.00 0.00 0.00 6.13
1997 2391 1.451028 CACTCTAGCCAAGCAGCCC 60.451 63.158 0.00 0.00 0.00 5.19
1998 2392 1.451028 CCACTCTAGCCAAGCAGCC 60.451 63.158 0.00 0.00 0.00 4.85
1999 2393 2.111582 GCCACTCTAGCCAAGCAGC 61.112 63.158 0.00 0.00 0.00 5.25
2000 2394 0.035630 AAGCCACTCTAGCCAAGCAG 60.036 55.000 0.00 0.00 0.00 4.24
2001 2395 0.036010 GAAGCCACTCTAGCCAAGCA 60.036 55.000 0.00 0.00 0.00 3.91
2002 2396 0.036010 TGAAGCCACTCTAGCCAAGC 60.036 55.000 0.00 0.00 0.00 4.01
2003 2397 1.731720 GTGAAGCCACTCTAGCCAAG 58.268 55.000 0.00 0.00 40.10 3.61
2004 2398 3.935993 GTGAAGCCACTCTAGCCAA 57.064 52.632 0.00 0.00 40.10 4.52
2013 2407 5.069781 AGAGAGGACATAATAGTGAAGCCAC 59.930 44.000 0.00 0.00 43.50 5.01
2014 2408 5.211973 AGAGAGGACATAATAGTGAAGCCA 58.788 41.667 0.00 0.00 0.00 4.75
2015 2409 5.799827 AGAGAGGACATAATAGTGAAGCC 57.200 43.478 0.00 0.00 0.00 4.35
2016 2410 6.699642 GTGAAGAGAGGACATAATAGTGAAGC 59.300 42.308 0.00 0.00 0.00 3.86
2017 2411 8.006298 AGTGAAGAGAGGACATAATAGTGAAG 57.994 38.462 0.00 0.00 0.00 3.02
2018 2412 7.962995 AGTGAAGAGAGGACATAATAGTGAA 57.037 36.000 0.00 0.00 0.00 3.18
2019 2413 7.201741 CGAAGTGAAGAGAGGACATAATAGTGA 60.202 40.741 0.00 0.00 0.00 3.41
2020 2414 6.915300 CGAAGTGAAGAGAGGACATAATAGTG 59.085 42.308 0.00 0.00 0.00 2.74
2021 2415 6.460399 GCGAAGTGAAGAGAGGACATAATAGT 60.460 42.308 0.00 0.00 0.00 2.12
2022 2416 5.918011 GCGAAGTGAAGAGAGGACATAATAG 59.082 44.000 0.00 0.00 0.00 1.73
2023 2417 5.359860 TGCGAAGTGAAGAGAGGACATAATA 59.640 40.000 0.00 0.00 0.00 0.98
2024 2418 4.160439 TGCGAAGTGAAGAGAGGACATAAT 59.840 41.667 0.00 0.00 0.00 1.28
2025 2419 3.509967 TGCGAAGTGAAGAGAGGACATAA 59.490 43.478 0.00 0.00 0.00 1.90
2026 2420 3.089284 TGCGAAGTGAAGAGAGGACATA 58.911 45.455 0.00 0.00 0.00 2.29
2027 2421 1.895798 TGCGAAGTGAAGAGAGGACAT 59.104 47.619 0.00 0.00 0.00 3.06
2028 2422 1.328279 TGCGAAGTGAAGAGAGGACA 58.672 50.000 0.00 0.00 0.00 4.02
2029 2423 2.333014 CTTGCGAAGTGAAGAGAGGAC 58.667 52.381 0.00 0.00 0.00 3.85
2030 2424 1.337260 GCTTGCGAAGTGAAGAGAGGA 60.337 52.381 0.00 0.00 0.00 3.71
2031 2425 1.074752 GCTTGCGAAGTGAAGAGAGG 58.925 55.000 0.00 0.00 0.00 3.69
2032 2426 1.074752 GGCTTGCGAAGTGAAGAGAG 58.925 55.000 0.00 0.00 0.00 3.20
2033 2427 0.681733 AGGCTTGCGAAGTGAAGAGA 59.318 50.000 0.00 0.00 0.00 3.10
2034 2428 1.517242 AAGGCTTGCGAAGTGAAGAG 58.483 50.000 0.00 0.00 0.00 2.85
2035 2429 1.603802 CAAAGGCTTGCGAAGTGAAGA 59.396 47.619 0.00 0.00 0.00 2.87
2036 2430 1.603802 TCAAAGGCTTGCGAAGTGAAG 59.396 47.619 0.00 0.00 32.14 3.02
2037 2431 1.674359 TCAAAGGCTTGCGAAGTGAA 58.326 45.000 0.00 0.00 32.14 3.18
2038 2432 1.603802 CTTCAAAGGCTTGCGAAGTGA 59.396 47.619 22.43 10.96 32.14 3.41
2039 2433 1.927710 GCTTCAAAGGCTTGCGAAGTG 60.928 52.381 27.25 12.75 32.14 3.16
2040 2434 0.312102 GCTTCAAAGGCTTGCGAAGT 59.688 50.000 27.25 2.00 32.14 3.01
2041 2435 0.387750 GGCTTCAAAGGCTTGCGAAG 60.388 55.000 24.76 24.76 46.98 3.79
2042 2436 1.659794 GGCTTCAAAGGCTTGCGAA 59.340 52.632 0.00 6.35 46.98 4.70
2043 2437 3.354678 GGCTTCAAAGGCTTGCGA 58.645 55.556 0.00 0.00 46.98 5.10
2050 2444 0.318955 CTGTTTGCCGGCTTCAAAGG 60.319 55.000 29.70 11.39 34.50 3.11
2051 2445 0.318955 CCTGTTTGCCGGCTTCAAAG 60.319 55.000 29.70 17.56 34.50 2.77
2052 2446 0.753479 TCCTGTTTGCCGGCTTCAAA 60.753 50.000 29.70 17.33 0.00 2.69
2053 2447 1.152860 TCCTGTTTGCCGGCTTCAA 60.153 52.632 29.70 15.02 0.00 2.69
2054 2448 1.600636 CTCCTGTTTGCCGGCTTCA 60.601 57.895 29.70 21.10 0.00 3.02
2055 2449 1.302511 TCTCCTGTTTGCCGGCTTC 60.303 57.895 29.70 17.62 0.00 3.86
2056 2450 1.600916 GTCTCCTGTTTGCCGGCTT 60.601 57.895 29.70 0.00 0.00 4.35
2057 2451 2.032681 GTCTCCTGTTTGCCGGCT 59.967 61.111 29.70 0.00 0.00 5.52
2058 2452 2.032681 AGTCTCCTGTTTGCCGGC 59.967 61.111 22.73 22.73 0.00 6.13
2059 2453 3.972227 CAGTCTCCTGTTTGCCGG 58.028 61.111 0.00 0.00 33.80 6.13
2067 2461 4.087892 CCCCGCCACAGTCTCCTG 62.088 72.222 0.00 0.00 44.68 3.86
2241 2635 5.395682 TCATTTTGAAGAGCAATCCCTTG 57.604 39.130 0.00 0.00 36.15 3.61
2268 2662 1.244019 GCTTCGCAAACCCATCCTGT 61.244 55.000 0.00 0.00 0.00 4.00
2272 2666 1.298859 ACGAGCTTCGCAAACCCATC 61.299 55.000 5.63 0.00 45.12 3.51
2282 2676 3.901797 AAAGGGCCCACGAGCTTCG 62.902 63.158 27.56 0.00 46.93 3.79
2285 2679 3.249189 TCAAAGGGCCCACGAGCT 61.249 61.111 27.56 0.00 0.00 4.09
2290 2684 1.187567 ATTGTGCTCAAAGGGCCCAC 61.188 55.000 27.56 12.31 37.11 4.61
2291 2685 1.155859 ATTGTGCTCAAAGGGCCCA 59.844 52.632 27.56 0.70 37.11 5.36
2339 2733 0.179018 ACCCTTGAACGCTTGCTTCT 60.179 50.000 0.00 0.00 0.00 2.85
2383 2777 2.736719 CGATGCTCTCGTCCAACTCAAT 60.737 50.000 1.70 0.00 42.56 2.57
2447 2841 0.835941 CTCTACTTCATGGCCAGCCT 59.164 55.000 13.05 0.00 36.94 4.58
2477 2871 6.068461 TGTAATTGGATAGCACCCTTGTAA 57.932 37.500 0.00 0.00 0.00 2.41
2528 2922 2.514592 CACGGCCAGGTAGCATGG 60.515 66.667 2.24 0.34 41.04 3.66
2551 2945 1.477030 GGCGTAAGATGTACCGTGCG 61.477 60.000 0.00 0.00 43.02 5.34
2552 2946 1.149964 GGGCGTAAGATGTACCGTGC 61.150 60.000 0.00 0.00 43.02 5.34
2614 3008 2.611518 CCTCACAGATTTGTCCTCGTC 58.388 52.381 0.00 0.00 34.62 4.20
2636 3030 0.462759 GTTCCAGCTTCCGGGAGATG 60.463 60.000 21.72 21.72 36.66 2.90
2655 3049 6.017109 ACAATTCCTTAAGTACACAGCACTTG 60.017 38.462 0.97 0.00 36.88 3.16
2682 3079 1.076777 ATTCGGGCCTTCATGGTGG 60.077 57.895 0.84 0.00 38.35 4.61
2697 3094 1.134699 TGAGTGATCGTGGAGCCATTC 60.135 52.381 0.00 0.00 0.00 2.67
2708 3105 0.385029 CCTCTGAGCCTGAGTGATCG 59.615 60.000 0.00 0.00 0.00 3.69
2714 3111 1.113788 CTTCTCCCTCTGAGCCTGAG 58.886 60.000 0.00 5.13 41.18 3.35
2717 3114 0.252650 AAGCTTCTCCCTCTGAGCCT 60.253 55.000 0.00 0.00 41.18 4.58
2744 3141 1.392589 AGACCAGTTGGCAAACAGTG 58.607 50.000 6.76 0.00 38.88 3.66
2749 3146 3.420893 CCTCATAAGACCAGTTGGCAAA 58.579 45.455 0.00 0.00 39.32 3.68
2789 3186 7.503566 TGAGATAATAAAATTGAGGGCCTGAAG 59.496 37.037 12.95 0.00 0.00 3.02
2820 3217 7.867403 AGTGCATGTGGTAAAGTAATTTCAAAG 59.133 33.333 0.00 0.00 0.00 2.77
2853 3250 1.834822 GCGCCTGAGATAGAGGGGT 60.835 63.158 0.00 0.00 43.77 4.95
2854 3251 1.814772 CTGCGCCTGAGATAGAGGGG 61.815 65.000 4.18 0.00 44.51 4.79
2865 3262 0.455633 GAATCAAGTTGCTGCGCCTG 60.456 55.000 4.18 0.00 0.00 4.85
2886 3283 3.775316 GACCCTTCAAGAACCTCTGGATA 59.225 47.826 0.00 0.00 0.00 2.59
2934 3331 0.607489 AGCTGTTTGGCGAGATTGCT 60.607 50.000 0.00 0.00 37.29 3.91
2935 3332 0.179179 GAGCTGTTTGGCGAGATTGC 60.179 55.000 0.00 0.00 37.29 3.56
3035 3432 2.113986 GCATGGGAATCTCGGGGG 59.886 66.667 0.00 0.00 0.00 5.40
3103 3500 0.518636 GACGTACGTCCAGTGCTGTA 59.481 55.000 33.07 0.00 39.08 2.74
3172 3707 3.157087 TGTCTCAATTTGAAAGCTCCCC 58.843 45.455 0.01 0.00 0.00 4.81
3173 3708 6.705863 ATATGTCTCAATTTGAAAGCTCCC 57.294 37.500 0.01 0.00 0.00 4.30
3224 3759 5.105064 AGCTCCTTGTTACGGCTCTAAAATA 60.105 40.000 0.00 0.00 0.00 1.40
3239 3774 3.957497 AGTAAGATCATCGAGCTCCTTGT 59.043 43.478 8.47 0.00 0.00 3.16
3240 3775 4.037327 TCAGTAAGATCATCGAGCTCCTTG 59.963 45.833 8.47 6.17 0.00 3.61
3310 3846 5.438761 AAACAGGAAACACAACATAGAGC 57.561 39.130 0.00 0.00 0.00 4.09
3313 3849 9.912634 AAATCATAAACAGGAAACACAACATAG 57.087 29.630 0.00 0.00 0.00 2.23
3332 3868 0.465460 GACTGGCGGCCCAAATCATA 60.465 55.000 17.97 0.00 41.58 2.15
3333 3869 1.754234 GACTGGCGGCCCAAATCAT 60.754 57.895 17.97 0.00 41.58 2.45
3334 3870 2.361104 GACTGGCGGCCCAAATCA 60.361 61.111 17.97 0.00 41.58 2.57
3335 3871 3.140814 GGACTGGCGGCCCAAATC 61.141 66.667 17.97 8.37 41.58 2.17
3336 3872 3.978193 TGGACTGGCGGCCCAAAT 61.978 61.111 17.97 0.00 41.58 2.32
3337 3873 4.966787 GTGGACTGGCGGCCCAAA 62.967 66.667 17.97 0.00 41.58 3.28
3340 3876 2.830186 TTATTGTGGACTGGCGGCCC 62.830 60.000 17.97 0.19 0.00 5.80
3341 3877 0.963355 TTTATTGTGGACTGGCGGCC 60.963 55.000 13.32 13.32 0.00 6.13
3342 3878 1.102978 ATTTATTGTGGACTGGCGGC 58.897 50.000 0.00 0.00 0.00 6.53
3343 3879 3.510719 CAAATTTATTGTGGACTGGCGG 58.489 45.455 0.00 0.00 0.00 6.13
3344 3880 3.510719 CCAAATTTATTGTGGACTGGCG 58.489 45.455 0.00 0.00 34.05 5.69
3345 3881 3.261580 GCCAAATTTATTGTGGACTGGC 58.738 45.455 0.00 0.00 41.14 4.85
3346 3882 4.533919 TGCCAAATTTATTGTGGACTGG 57.466 40.909 0.00 0.00 34.05 4.00
3347 3883 7.067372 TCTCTATGCCAAATTTATTGTGGACTG 59.933 37.037 0.00 0.00 34.05 3.51
3348 3884 7.118723 TCTCTATGCCAAATTTATTGTGGACT 58.881 34.615 0.00 0.00 34.05 3.85
3349 3885 7.333528 TCTCTATGCCAAATTTATTGTGGAC 57.666 36.000 0.00 0.00 34.05 4.02
3350 3886 7.953005 TTCTCTATGCCAAATTTATTGTGGA 57.047 32.000 0.00 0.00 34.05 4.02
3351 3887 9.603921 AATTTCTCTATGCCAAATTTATTGTGG 57.396 29.630 0.00 0.00 35.39 4.17
3415 3951 9.408648 CCATGGAAATTTTACTAACTAGACCAT 57.591 33.333 5.56 0.00 34.26 3.55
3416 3952 8.387813 ACCATGGAAATTTTACTAACTAGACCA 58.612 33.333 21.47 0.00 0.00 4.02
3417 3953 8.803397 ACCATGGAAATTTTACTAACTAGACC 57.197 34.615 21.47 0.00 0.00 3.85
3446 3982 6.972722 TCGTCGAGTTCCCAATTTTATTTTT 58.027 32.000 0.00 0.00 0.00 1.94
3447 3983 6.563222 TCGTCGAGTTCCCAATTTTATTTT 57.437 33.333 0.00 0.00 0.00 1.82
3448 3984 6.349033 CCTTCGTCGAGTTCCCAATTTTATTT 60.349 38.462 0.00 0.00 0.00 1.40
3449 3985 5.123344 CCTTCGTCGAGTTCCCAATTTTATT 59.877 40.000 0.00 0.00 0.00 1.40
3450 3986 4.634443 CCTTCGTCGAGTTCCCAATTTTAT 59.366 41.667 0.00 0.00 0.00 1.40
3451 3987 3.998341 CCTTCGTCGAGTTCCCAATTTTA 59.002 43.478 0.00 0.00 0.00 1.52
3454 3990 1.346722 ACCTTCGTCGAGTTCCCAATT 59.653 47.619 0.00 0.00 0.00 2.32
3539 4075 9.774742 CAAGTCCATATTTAGTGCTAAACTTTC 57.225 33.333 6.55 0.00 40.56 2.62
3661 4197 8.570068 TTAGCTGGTATCGGTTCTTTAATTTT 57.430 30.769 0.00 0.00 0.00 1.82
3792 4328 7.414436 GTGTTCTAATGTAGCTTTTGTTGACA 58.586 34.615 0.00 0.00 0.00 3.58
3807 4343 7.390440 TGTTCATCAGGTTTAGGTGTTCTAATG 59.610 37.037 0.00 0.00 37.74 1.90
3911 4448 4.941263 TGGCAATTATAGCAGTTTCTTCGT 59.059 37.500 0.00 0.00 0.00 3.85
3919 4456 4.599041 TCAGGTTTGGCAATTATAGCAGT 58.401 39.130 0.00 0.00 0.00 4.40
3982 4519 8.474025 ACAGTGATCTCCTATTTTAACTGAGAG 58.526 37.037 0.00 0.00 37.73 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.