Multiple sequence alignment - TraesCS2D01G120600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G120600 chr2D 100.000 3062 0 0 1 3062 70282679 70285740 0.000000e+00 5655.0
1 TraesCS2D01G120600 chr2D 79.690 1226 174 44 837 2047 69918927 69920092 0.000000e+00 815.0
2 TraesCS2D01G120600 chr2D 88.102 706 57 13 1 684 70033385 70034085 0.000000e+00 813.0
3 TraesCS2D01G120600 chr2D 80.806 1042 113 41 1074 2069 70034407 70035407 0.000000e+00 736.0
4 TraesCS2D01G120600 chr2D 85.393 267 30 4 743 1001 70034102 70034367 5.030000e-68 268.0
5 TraesCS2D01G120600 chr2D 91.589 107 8 1 2624 2730 70285199 70285304 2.460000e-31 147.0
6 TraesCS2D01G120600 chr2D 91.589 107 8 1 2521 2626 70285302 70285408 2.460000e-31 147.0
7 TraesCS2D01G120600 chr2B 87.639 2427 185 57 1 2369 106315904 106313535 0.000000e+00 2713.0
8 TraesCS2D01G120600 chr2B 84.309 1230 130 24 858 2077 106216355 106215179 0.000000e+00 1144.0
9 TraesCS2D01G120600 chr2B 80.671 983 141 32 1092 2047 106377463 106376503 0.000000e+00 717.0
10 TraesCS2D01G120600 chr2B 83.258 221 26 5 642 862 106225336 106225127 3.120000e-45 193.0
11 TraesCS2D01G120600 chr2B 80.909 110 19 2 2624 2732 106302939 106302831 5.440000e-13 86.1
12 TraesCS2D01G120600 chr2B 78.899 109 23 0 2624 2732 106313434 106313326 1.180000e-09 75.0
13 TraesCS2D01G120600 chr1B 91.880 899 56 11 1 891 612065950 612066839 0.000000e+00 1240.0
14 TraesCS2D01G120600 chr1B 74.237 524 85 28 825 1340 612044712 612045193 1.130000e-39 174.0
15 TraesCS2D01G120600 chr1A 80.087 231 31 12 1552 1773 520550953 520551177 1.140000e-34 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G120600 chr2D 70282679 70285740 3061 False 1983.000000 5655 94.392667 1 3062 3 chr2D.!!$F3 3061
1 TraesCS2D01G120600 chr2D 69918927 69920092 1165 False 815.000000 815 79.690000 837 2047 1 chr2D.!!$F1 1210
2 TraesCS2D01G120600 chr2D 70033385 70035407 2022 False 605.666667 813 84.767000 1 2069 3 chr2D.!!$F2 2068
3 TraesCS2D01G120600 chr2B 106313326 106315904 2578 True 1394.000000 2713 83.269000 1 2732 2 chr2B.!!$R5 2731
4 TraesCS2D01G120600 chr2B 106215179 106216355 1176 True 1144.000000 1144 84.309000 858 2077 1 chr2B.!!$R1 1219
5 TraesCS2D01G120600 chr2B 106376503 106377463 960 True 717.000000 717 80.671000 1092 2047 1 chr2B.!!$R4 955
6 TraesCS2D01G120600 chr1B 612065950 612066839 889 False 1240.000000 1240 91.880000 1 891 1 chr1B.!!$F2 890

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
735 791 0.179156 GCGAACGATGGTAGTTCCGA 60.179 55.0 0.0 0.0 43.55 4.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2641 2812 0.249868 CACCACTGGCAAACTCGAGA 60.25 55.0 21.68 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 2.204461 TTGGTGGAAGTCGAGGCGA 61.204 57.895 0.00 0.00 0.00 5.54
257 259 6.064060 CCCTTTATCAATCATGTGCTTAGGA 58.936 40.000 0.00 0.00 0.00 2.94
383 386 4.684484 GGTTATCTCTGATTAACCGGGT 57.316 45.455 6.32 0.00 38.37 5.28
478 485 4.949856 TCTTGAAAGAAAGCTTGACTTGGT 59.050 37.500 16.33 5.58 39.09 3.67
548 555 2.750237 GGTTTAGCAGGGCCCACG 60.750 66.667 27.56 16.45 0.00 4.94
709 765 2.559231 TGTACACTGAGCAATCCGTGTA 59.441 45.455 8.11 8.11 40.66 2.90
717 773 1.883084 CAATCCGTGTAGAGCCCGC 60.883 63.158 0.00 0.00 0.00 6.13
727 783 4.814294 GAGCCCGCGAACGATGGT 62.814 66.667 8.23 0.00 43.93 3.55
728 784 3.420214 GAGCCCGCGAACGATGGTA 62.420 63.158 8.23 0.00 43.93 3.25
729 785 2.960129 GCCCGCGAACGATGGTAG 60.960 66.667 8.23 0.00 43.93 3.18
730 786 2.493030 CCCGCGAACGATGGTAGT 59.507 61.111 8.23 0.00 43.93 2.73
731 787 1.153706 CCCGCGAACGATGGTAGTT 60.154 57.895 8.23 0.00 43.93 2.24
732 788 1.143969 CCCGCGAACGATGGTAGTTC 61.144 60.000 8.23 0.00 43.93 3.01
733 789 1.143969 CCGCGAACGATGGTAGTTCC 61.144 60.000 8.23 0.00 43.55 3.62
734 790 1.469126 CGCGAACGATGGTAGTTCCG 61.469 60.000 0.00 5.03 43.55 4.30
735 791 0.179156 GCGAACGATGGTAGTTCCGA 60.179 55.000 0.00 0.00 43.55 4.55
736 792 1.535437 GCGAACGATGGTAGTTCCGAT 60.535 52.381 0.00 0.00 43.55 4.18
737 793 2.287188 GCGAACGATGGTAGTTCCGATA 60.287 50.000 0.00 0.00 43.55 2.92
738 794 3.793129 GCGAACGATGGTAGTTCCGATAA 60.793 47.826 0.00 0.00 43.55 1.75
739 795 4.353737 CGAACGATGGTAGTTCCGATAAA 58.646 43.478 0.00 0.00 43.55 1.40
740 796 4.980434 CGAACGATGGTAGTTCCGATAAAT 59.020 41.667 0.00 0.00 43.55 1.40
741 797 6.144854 CGAACGATGGTAGTTCCGATAAATA 58.855 40.000 0.00 0.00 43.55 1.40
767 832 3.077556 CTCCCACCCGACCTCCAG 61.078 72.222 0.00 0.00 0.00 3.86
1001 1083 1.751924 GCTCCTCGTCTACACCAGAAT 59.248 52.381 0.00 0.00 34.17 2.40
1068 1150 4.742201 CTGGACCTGGACGCCGTG 62.742 72.222 0.00 0.00 0.00 4.94
1225 1331 4.814294 CCCGGCAGTACCTCGTGC 62.814 72.222 0.00 0.00 39.08 5.34
1281 1402 3.706373 CTGGCCGTACAGCAGGGT 61.706 66.667 3.01 0.00 34.46 4.34
1466 1587 2.683465 AAGCCACGCCCATGGAGAT 61.683 57.895 15.22 0.00 43.02 2.75
1467 1588 2.898920 AAGCCACGCCCATGGAGATG 62.899 60.000 15.22 7.71 43.02 2.90
2018 2160 2.261671 GCACGGCTTCTTCGAGGA 59.738 61.111 0.00 0.00 0.00 3.71
2051 2193 1.421485 GCTTGCCGTCGTTCAGATG 59.579 57.895 0.00 0.00 35.65 2.90
2053 2195 2.283780 CTTGCCGTCGTTCAGATGCG 62.284 60.000 0.00 0.00 34.56 4.73
2069 2215 1.750399 GCGGCCCATGAGTTGATGT 60.750 57.895 0.00 0.00 0.00 3.06
2070 2216 1.718757 GCGGCCCATGAGTTGATGTC 61.719 60.000 0.00 0.00 0.00 3.06
2071 2217 1.097547 CGGCCCATGAGTTGATGTCC 61.098 60.000 0.00 0.00 0.00 4.02
2072 2218 1.097547 GGCCCATGAGTTGATGTCCG 61.098 60.000 0.00 0.00 0.00 4.79
2073 2219 0.107703 GCCCATGAGTTGATGTCCGA 60.108 55.000 0.00 0.00 0.00 4.55
2074 2220 1.475751 GCCCATGAGTTGATGTCCGAT 60.476 52.381 0.00 0.00 0.00 4.18
2076 2222 1.600957 CCATGAGTTGATGTCCGATGC 59.399 52.381 0.00 0.00 0.00 3.91
2078 2224 0.530288 TGAGTTGATGTCCGATGCGA 59.470 50.000 0.00 0.00 0.00 5.10
2079 2225 1.136891 TGAGTTGATGTCCGATGCGAT 59.863 47.619 0.00 0.00 0.00 4.58
2080 2226 1.524355 GAGTTGATGTCCGATGCGATG 59.476 52.381 0.00 0.00 0.00 3.84
2081 2227 0.041839 GTTGATGTCCGATGCGATGC 60.042 55.000 0.00 0.00 0.00 3.91
2082 2228 1.159713 TTGATGTCCGATGCGATGCC 61.160 55.000 0.00 0.00 0.00 4.40
2083 2229 1.595109 GATGTCCGATGCGATGCCA 60.595 57.895 0.00 0.00 0.00 4.92
2084 2230 0.952497 GATGTCCGATGCGATGCCAT 60.952 55.000 0.00 0.00 0.00 4.40
2085 2231 1.232621 ATGTCCGATGCGATGCCATG 61.233 55.000 0.00 0.00 0.00 3.66
2086 2232 2.974148 TCCGATGCGATGCCATGC 60.974 61.111 0.00 0.00 0.00 4.06
2116 2264 4.451900 TCCAAACAGAGAAGAAGAACACC 58.548 43.478 0.00 0.00 0.00 4.16
2125 2273 3.876589 GAAGAACACCGCGGCTCCA 62.877 63.158 28.58 0.00 0.00 3.86
2126 2274 3.469863 AAGAACACCGCGGCTCCAA 62.470 57.895 28.58 0.00 0.00 3.53
2127 2275 2.951475 AAGAACACCGCGGCTCCAAA 62.951 55.000 28.58 0.00 0.00 3.28
2128 2276 2.282180 AACACCGCGGCTCCAAAT 60.282 55.556 28.58 0.00 0.00 2.32
2129 2277 1.862602 GAACACCGCGGCTCCAAATT 61.863 55.000 28.58 8.98 0.00 1.82
2130 2278 0.606944 AACACCGCGGCTCCAAATTA 60.607 50.000 28.58 0.00 0.00 1.40
2133 2281 0.524414 ACCGCGGCTCCAAATTAAAC 59.476 50.000 28.58 0.00 0.00 2.01
2134 2282 0.808755 CCGCGGCTCCAAATTAAACT 59.191 50.000 14.67 0.00 0.00 2.66
2135 2283 1.467374 CCGCGGCTCCAAATTAAACTG 60.467 52.381 14.67 0.00 0.00 3.16
2149 2300 1.289160 AAACTGGAGGCAGCCATCTA 58.711 50.000 15.80 5.52 37.30 1.98
2150 2301 0.543749 AACTGGAGGCAGCCATCTAC 59.456 55.000 15.80 0.00 37.30 2.59
2151 2302 0.326048 ACTGGAGGCAGCCATCTACT 60.326 55.000 15.80 0.00 37.30 2.57
2152 2303 0.392336 CTGGAGGCAGCCATCTACTC 59.608 60.000 15.80 0.10 37.30 2.59
2153 2304 1.050988 TGGAGGCAGCCATCTACTCC 61.051 60.000 15.80 11.31 41.95 3.85
2160 2311 3.755378 GGCAGCCATCTACTCCATATTTG 59.245 47.826 6.55 0.00 0.00 2.32
2164 2315 4.588951 AGCCATCTACTCCATATTTGACGA 59.411 41.667 0.00 0.00 0.00 4.20
2187 2338 2.863137 CGCAAAACAAAGGCTTGCTTTA 59.137 40.909 0.00 0.00 42.60 1.85
2188 2339 3.494251 CGCAAAACAAAGGCTTGCTTTAT 59.506 39.130 0.00 0.00 42.60 1.40
2190 2341 5.443261 GCAAAACAAAGGCTTGCTTTATTC 58.557 37.500 0.00 0.00 41.74 1.75
2198 2364 8.150296 ACAAAGGCTTGCTTTATTCTATTTGTT 58.850 29.630 0.00 0.00 34.49 2.83
2204 2370 7.814587 GCTTGCTTTATTCTATTTGTTGGAGTT 59.185 33.333 0.00 0.00 0.00 3.01
2218 2389 8.856153 TTTGTTGGAGTTAGTTATTATGCTGA 57.144 30.769 0.00 0.00 0.00 4.26
2305 2476 3.450817 TCATAGTGACATGGTGGGTACAG 59.549 47.826 0.00 0.00 0.00 2.74
2308 2479 1.346395 GTGACATGGTGGGTACAGACA 59.654 52.381 0.00 0.00 0.00 3.41
2328 2499 9.220767 ACAGACAAACTCTATATTTGGAACTTC 57.779 33.333 2.84 0.00 40.64 3.01
2330 2501 9.442047 AGACAAACTCTATATTTGGAACTTCAG 57.558 33.333 2.84 0.00 40.64 3.02
2383 2554 7.881775 AAAAATTGTACTCCCAGATACATCC 57.118 36.000 0.00 0.00 31.55 3.51
2384 2555 6.575244 AAATTGTACTCCCAGATACATCCA 57.425 37.500 0.00 0.00 31.55 3.41
2385 2556 6.770286 AATTGTACTCCCAGATACATCCAT 57.230 37.500 0.00 0.00 31.55 3.41
2386 2557 6.770286 ATTGTACTCCCAGATACATCCATT 57.230 37.500 0.00 0.00 31.55 3.16
2387 2558 6.575244 TTGTACTCCCAGATACATCCATTT 57.425 37.500 0.00 0.00 31.55 2.32
2388 2559 5.928976 TGTACTCCCAGATACATCCATTTG 58.071 41.667 0.00 0.00 0.00 2.32
2389 2560 5.665360 TGTACTCCCAGATACATCCATTTGA 59.335 40.000 0.00 0.00 0.00 2.69
2390 2561 5.301835 ACTCCCAGATACATCCATTTGAG 57.698 43.478 0.00 0.00 0.00 3.02
2391 2562 4.070716 CTCCCAGATACATCCATTTGAGC 58.929 47.826 0.00 0.00 0.00 4.26
2392 2563 3.459227 TCCCAGATACATCCATTTGAGCA 59.541 43.478 0.00 0.00 0.00 4.26
2393 2564 3.567164 CCCAGATACATCCATTTGAGCAC 59.433 47.826 0.00 0.00 0.00 4.40
2394 2565 4.201657 CCAGATACATCCATTTGAGCACA 58.798 43.478 0.00 0.00 0.00 4.57
2395 2566 4.641541 CCAGATACATCCATTTGAGCACAA 59.358 41.667 0.00 0.00 0.00 3.33
2396 2567 5.220989 CCAGATACATCCATTTGAGCACAAG 60.221 44.000 0.00 0.00 37.32 3.16
2397 2568 5.356190 CAGATACATCCATTTGAGCACAAGT 59.644 40.000 0.00 0.00 37.32 3.16
2398 2569 3.928727 ACATCCATTTGAGCACAAGTG 57.071 42.857 11.55 11.55 41.33 3.16
2399 2570 3.225104 ACATCCATTTGAGCACAAGTGT 58.775 40.909 15.97 6.80 40.50 3.55
2400 2571 4.397420 ACATCCATTTGAGCACAAGTGTA 58.603 39.130 15.97 3.27 40.50 2.90
2401 2572 4.826733 ACATCCATTTGAGCACAAGTGTAA 59.173 37.500 15.97 6.44 40.50 2.41
2402 2573 5.477984 ACATCCATTTGAGCACAAGTGTAAT 59.522 36.000 15.97 8.13 40.50 1.89
2403 2574 6.658816 ACATCCATTTGAGCACAAGTGTAATA 59.341 34.615 15.97 2.34 40.50 0.98
2404 2575 7.340232 ACATCCATTTGAGCACAAGTGTAATAT 59.660 33.333 15.97 4.17 40.50 1.28
2405 2576 7.087409 TCCATTTGAGCACAAGTGTAATATG 57.913 36.000 15.97 6.96 40.50 1.78
2406 2577 6.095300 TCCATTTGAGCACAAGTGTAATATGG 59.905 38.462 15.97 14.18 40.50 2.74
2407 2578 6.095300 CCATTTGAGCACAAGTGTAATATGGA 59.905 38.462 15.97 0.00 40.50 3.41
2408 2579 7.201848 CCATTTGAGCACAAGTGTAATATGGAT 60.202 37.037 15.97 0.00 40.50 3.41
2409 2580 6.925610 TTGAGCACAAGTGTAATATGGATC 57.074 37.500 1.79 0.00 0.00 3.36
2410 2581 5.049828 TGAGCACAAGTGTAATATGGATCG 58.950 41.667 1.79 0.00 0.00 3.69
2411 2582 4.380531 AGCACAAGTGTAATATGGATCGG 58.619 43.478 1.79 0.00 0.00 4.18
2412 2583 4.100963 AGCACAAGTGTAATATGGATCGGA 59.899 41.667 1.79 0.00 0.00 4.55
2413 2584 4.997395 GCACAAGTGTAATATGGATCGGAT 59.003 41.667 1.79 0.00 0.00 4.18
2414 2585 5.106948 GCACAAGTGTAATATGGATCGGATG 60.107 44.000 0.00 0.00 0.00 3.51
2415 2586 5.409520 CACAAGTGTAATATGGATCGGATGG 59.590 44.000 0.00 0.00 0.00 3.51
2416 2587 5.306937 ACAAGTGTAATATGGATCGGATGGA 59.693 40.000 0.00 0.00 0.00 3.41
2427 2598 7.928307 ATGGATCGGATGGAGTAAATAATTG 57.072 36.000 0.00 0.00 0.00 2.32
2434 2605 6.638063 CGGATGGAGTAAATAATTGTTGCATG 59.362 38.462 0.00 0.00 0.00 4.06
2442 2613 9.023962 AGTAAATAATTGTTGCATGGAGAGAAA 57.976 29.630 0.00 0.00 0.00 2.52
2460 2631 6.349300 AGAGAAAGAGTAGAAACACAAGCAA 58.651 36.000 0.00 0.00 0.00 3.91
2472 2643 5.400066 AACACAAGCAAGTAAACTTTGGT 57.600 34.783 0.00 0.00 33.11 3.67
2473 2644 6.518208 AACACAAGCAAGTAAACTTTGGTA 57.482 33.333 0.00 0.00 33.11 3.25
2477 2648 8.038351 ACACAAGCAAGTAAACTTTGGTAAAAT 58.962 29.630 0.00 0.00 33.11 1.82
2503 2674 7.710676 ATAATGTGTTTACCATAACCTGCAA 57.289 32.000 0.00 0.00 0.00 4.08
2506 2677 4.830046 TGTGTTTACCATAACCTGCAATGT 59.170 37.500 0.00 0.00 0.00 2.71
2523 2694 7.042456 CCTGCAATGTAGCTAAGTGTATGTTAG 60.042 40.741 0.00 0.00 34.99 2.34
2545 2716 5.452777 AGTTTAATTTGCACTTTCTCGAGC 58.547 37.500 7.81 0.00 0.00 5.03
2546 2717 5.239525 AGTTTAATTTGCACTTTCTCGAGCT 59.760 36.000 7.81 0.00 0.00 4.09
2547 2718 5.689383 TTAATTTGCACTTTCTCGAGCTT 57.311 34.783 7.81 0.00 0.00 3.74
2548 2719 3.549299 ATTTGCACTTTCTCGAGCTTG 57.451 42.857 7.81 2.88 0.00 4.01
2549 2720 0.588252 TTGCACTTTCTCGAGCTTGC 59.412 50.000 7.81 13.15 0.00 4.01
2550 2721 1.230635 TGCACTTTCTCGAGCTTGCC 61.231 55.000 7.81 0.00 0.00 4.52
2551 2722 1.784062 CACTTTCTCGAGCTTGCCG 59.216 57.895 7.81 0.00 0.00 5.69
2552 2723 1.374758 ACTTTCTCGAGCTTGCCGG 60.375 57.895 7.81 0.00 0.00 6.13
2553 2724 2.742372 TTTCTCGAGCTTGCCGGC 60.742 61.111 22.73 22.73 0.00 6.13
2556 2727 4.880537 CTCGAGCTTGCCGGCGAT 62.881 66.667 23.90 6.93 37.29 4.58
2559 2730 2.590007 GAGCTTGCCGGCGATGAT 60.590 61.111 23.90 13.10 37.29 2.45
2560 2731 1.300931 GAGCTTGCCGGCGATGATA 60.301 57.895 23.90 0.00 37.29 2.15
2561 2732 1.287730 GAGCTTGCCGGCGATGATAG 61.288 60.000 23.90 8.87 37.29 2.08
2562 2733 1.595382 GCTTGCCGGCGATGATAGT 60.595 57.895 23.90 0.00 0.00 2.12
2563 2734 0.319555 GCTTGCCGGCGATGATAGTA 60.320 55.000 23.90 0.00 0.00 1.82
2564 2735 1.419374 CTTGCCGGCGATGATAGTAC 58.581 55.000 23.90 0.00 0.00 2.73
2565 2736 1.000163 CTTGCCGGCGATGATAGTACT 60.000 52.381 23.90 0.00 0.00 2.73
2566 2737 1.037493 TGCCGGCGATGATAGTACTT 58.963 50.000 23.90 0.00 0.00 2.24
2567 2738 1.000607 TGCCGGCGATGATAGTACTTC 60.001 52.381 23.90 0.00 0.00 3.01
2568 2739 1.000607 GCCGGCGATGATAGTACTTCA 60.001 52.381 12.58 5.47 0.00 3.02
2569 2740 2.545113 GCCGGCGATGATAGTACTTCAA 60.545 50.000 12.58 0.00 0.00 2.69
2570 2741 3.050619 CCGGCGATGATAGTACTTCAAC 58.949 50.000 9.30 3.29 0.00 3.18
2571 2742 3.490249 CCGGCGATGATAGTACTTCAACA 60.490 47.826 9.30 0.00 0.00 3.33
2572 2743 4.109766 CGGCGATGATAGTACTTCAACAA 58.890 43.478 0.00 0.00 0.00 2.83
2573 2744 4.745125 CGGCGATGATAGTACTTCAACAAT 59.255 41.667 0.00 0.00 0.00 2.71
2574 2745 5.234329 CGGCGATGATAGTACTTCAACAATT 59.766 40.000 0.00 0.00 0.00 2.32
2575 2746 6.238103 CGGCGATGATAGTACTTCAACAATTT 60.238 38.462 0.00 0.00 0.00 1.82
2576 2747 7.472543 GGCGATGATAGTACTTCAACAATTTT 58.527 34.615 0.00 0.00 0.00 1.82
2577 2748 7.968405 GGCGATGATAGTACTTCAACAATTTTT 59.032 33.333 0.00 0.00 0.00 1.94
2578 2749 8.788813 GCGATGATAGTACTTCAACAATTTTTG 58.211 33.333 0.00 0.00 0.00 2.44
2579 2750 8.788813 CGATGATAGTACTTCAACAATTTTTGC 58.211 33.333 0.00 0.00 0.00 3.68
2580 2751 9.846248 GATGATAGTACTTCAACAATTTTTGCT 57.154 29.630 0.00 0.00 0.00 3.91
2582 2753 9.462174 TGATAGTACTTCAACAATTTTTGCTTG 57.538 29.630 0.00 0.00 0.00 4.01
2583 2754 9.463443 GATAGTACTTCAACAATTTTTGCTTGT 57.537 29.630 0.00 1.88 38.44 3.16
2585 2756 8.628882 AGTACTTCAACAATTTTTGCTTGTAC 57.371 30.769 16.98 16.98 35.84 2.90
2586 2757 8.247562 AGTACTTCAACAATTTTTGCTTGTACA 58.752 29.630 21.62 0.00 35.84 2.90
2587 2758 7.289587 ACTTCAACAATTTTTGCTTGTACAC 57.710 32.000 0.00 0.00 35.84 2.90
2588 2759 6.870965 ACTTCAACAATTTTTGCTTGTACACA 59.129 30.769 0.00 0.00 35.84 3.72
2589 2760 7.548780 ACTTCAACAATTTTTGCTTGTACACAT 59.451 29.630 0.00 0.00 35.84 3.21
2590 2761 7.231705 TCAACAATTTTTGCTTGTACACATG 57.768 32.000 0.00 0.00 35.84 3.21
2591 2762 6.815641 TCAACAATTTTTGCTTGTACACATGT 59.184 30.769 0.00 0.00 35.84 3.21
2592 2763 6.826893 ACAATTTTTGCTTGTACACATGTC 57.173 33.333 0.00 0.00 35.15 3.06
2593 2764 6.572519 ACAATTTTTGCTTGTACACATGTCT 58.427 32.000 0.00 0.00 35.15 3.41
2594 2765 7.711846 ACAATTTTTGCTTGTACACATGTCTA 58.288 30.769 0.00 0.00 35.15 2.59
2595 2766 8.359642 ACAATTTTTGCTTGTACACATGTCTAT 58.640 29.630 0.00 0.00 35.15 1.98
2596 2767 8.853345 CAATTTTTGCTTGTACACATGTCTATC 58.147 33.333 0.00 0.00 0.00 2.08
2597 2768 7.744087 TTTTTGCTTGTACACATGTCTATCT 57.256 32.000 0.00 0.00 0.00 1.98
2598 2769 8.840833 TTTTTGCTTGTACACATGTCTATCTA 57.159 30.769 0.00 0.00 0.00 1.98
2599 2770 9.448438 TTTTTGCTTGTACACATGTCTATCTAT 57.552 29.630 0.00 0.00 0.00 1.98
2600 2771 8.648557 TTTGCTTGTACACATGTCTATCTATC 57.351 34.615 0.00 0.00 0.00 2.08
2601 2772 6.438763 TGCTTGTACACATGTCTATCTATCG 58.561 40.000 0.00 0.00 0.00 2.92
2602 2773 6.039382 TGCTTGTACACATGTCTATCTATCGT 59.961 38.462 0.00 0.00 0.00 3.73
2603 2774 6.360947 GCTTGTACACATGTCTATCTATCGTG 59.639 42.308 0.00 0.00 0.00 4.35
2604 2775 6.313744 TGTACACATGTCTATCTATCGTGG 57.686 41.667 0.00 0.00 0.00 4.94
2605 2776 4.855715 ACACATGTCTATCTATCGTGGG 57.144 45.455 0.00 0.00 0.00 4.61
2606 2777 4.215908 ACACATGTCTATCTATCGTGGGT 58.784 43.478 0.00 0.00 31.07 4.51
2607 2778 4.649674 ACACATGTCTATCTATCGTGGGTT 59.350 41.667 0.00 0.00 31.79 4.11
2608 2779 5.128827 ACACATGTCTATCTATCGTGGGTTT 59.871 40.000 0.00 0.00 31.79 3.27
2609 2780 6.049149 CACATGTCTATCTATCGTGGGTTTT 58.951 40.000 0.00 0.00 0.00 2.43
2610 2781 6.538742 CACATGTCTATCTATCGTGGGTTTTT 59.461 38.462 0.00 0.00 0.00 1.94
2611 2782 7.709182 CACATGTCTATCTATCGTGGGTTTTTA 59.291 37.037 0.00 0.00 0.00 1.52
2612 2783 8.262227 ACATGTCTATCTATCGTGGGTTTTTAA 58.738 33.333 0.00 0.00 0.00 1.52
2613 2784 9.104965 CATGTCTATCTATCGTGGGTTTTTAAA 57.895 33.333 0.00 0.00 0.00 1.52
2614 2785 9.675464 ATGTCTATCTATCGTGGGTTTTTAAAA 57.325 29.630 0.00 0.00 0.00 1.52
2615 2786 9.675464 TGTCTATCTATCGTGGGTTTTTAAAAT 57.325 29.630 0.55 0.00 0.00 1.82
2646 2817 9.959749 AACTTAATTTAATTTGCACTTTCTCGA 57.040 25.926 0.00 0.00 0.00 4.04
2647 2818 9.612620 ACTTAATTTAATTTGCACTTTCTCGAG 57.387 29.630 5.93 5.93 0.00 4.04
2655 2826 1.069636 GCACTTTCTCGAGTTTGCCAG 60.070 52.381 13.13 3.41 0.00 4.85
2656 2827 2.213499 CACTTTCTCGAGTTTGCCAGT 58.787 47.619 13.13 4.01 0.00 4.00
2658 2829 1.532868 CTTTCTCGAGTTTGCCAGTGG 59.467 52.381 13.13 4.20 0.00 4.00
2662 2833 0.396435 TCGAGTTTGCCAGTGGTGAT 59.604 50.000 11.74 0.00 0.00 3.06
2664 2835 2.002586 CGAGTTTGCCAGTGGTGATAG 58.997 52.381 11.74 0.00 0.00 2.08
2670 2841 3.887621 TGCCAGTGGTGATAGTACTTC 57.112 47.619 11.74 0.00 0.00 3.01
2672 2843 3.580895 TGCCAGTGGTGATAGTACTTCAA 59.419 43.478 11.74 0.00 0.00 2.69
2673 2844 3.933332 GCCAGTGGTGATAGTACTTCAAC 59.067 47.826 11.74 8.31 0.00 3.18
2676 2847 6.173339 CCAGTGGTGATAGTACTTCAACAAT 58.827 40.000 20.27 17.90 42.15 2.71
2680 2851 9.131791 AGTGGTGATAGTACTTCAACAATTTTT 57.868 29.630 20.27 7.72 42.15 1.94
2685 2856 9.409312 TGATAGTACTTCAACAATTTTTGCATG 57.591 29.630 0.00 0.00 0.00 4.06
2688 2859 8.574196 AGTACTTCAACAATTTTTGCATGTAC 57.426 30.769 16.98 16.98 0.00 2.90
2689 2860 8.194104 AGTACTTCAACAATTTTTGCATGTACA 58.806 29.630 21.62 0.00 30.34 2.90
2690 2861 7.232945 ACTTCAACAATTTTTGCATGTACAC 57.767 32.000 0.00 0.00 0.00 2.90
2708 2879 4.855715 ACACATGTCTATCTATCGTGGG 57.144 45.455 0.00 0.00 0.00 4.61
2713 2884 6.538742 CACATGTCTATCTATCGTGGGTTTTT 59.461 38.462 0.00 0.00 0.00 1.94
2748 2919 9.856162 AAAACTTATACTCCCTCAGTTTTACAA 57.144 29.630 6.56 0.00 42.89 2.41
2755 2926 7.496346 ACTCCCTCAGTTTTACAATATCAGA 57.504 36.000 0.00 0.00 26.56 3.27
2756 2927 7.331791 ACTCCCTCAGTTTTACAATATCAGAC 58.668 38.462 0.00 0.00 26.56 3.51
2757 2928 6.338146 TCCCTCAGTTTTACAATATCAGACG 58.662 40.000 0.00 0.00 0.00 4.18
2758 2929 6.070995 TCCCTCAGTTTTACAATATCAGACGT 60.071 38.462 0.00 0.00 0.00 4.34
2759 2930 6.594159 CCCTCAGTTTTACAATATCAGACGTT 59.406 38.462 0.00 0.00 0.00 3.99
2760 2931 7.119262 CCCTCAGTTTTACAATATCAGACGTTT 59.881 37.037 0.00 0.00 0.00 3.60
2761 2932 8.504005 CCTCAGTTTTACAATATCAGACGTTTT 58.496 33.333 0.00 0.00 0.00 2.43
2762 2933 9.878599 CTCAGTTTTACAATATCAGACGTTTTT 57.121 29.630 0.00 0.00 0.00 1.94
2763 2934 9.658475 TCAGTTTTACAATATCAGACGTTTTTG 57.342 29.630 0.00 0.00 0.00 2.44
2764 2935 8.417176 CAGTTTTACAATATCAGACGTTTTTGC 58.583 33.333 0.00 0.00 0.00 3.68
2765 2936 8.132362 AGTTTTACAATATCAGACGTTTTTGCA 58.868 29.630 0.00 0.00 0.00 4.08
2766 2937 8.911662 GTTTTACAATATCAGACGTTTTTGCAT 58.088 29.630 0.00 0.00 0.00 3.96
2767 2938 8.446489 TTTACAATATCAGACGTTTTTGCATG 57.554 30.769 0.00 0.00 0.00 4.06
2768 2939 4.858692 ACAATATCAGACGTTTTTGCATGC 59.141 37.500 11.82 11.82 0.00 4.06
2769 2940 4.970662 ATATCAGACGTTTTTGCATGCT 57.029 36.364 20.33 0.00 0.00 3.79
2770 2941 2.404265 TCAGACGTTTTTGCATGCTG 57.596 45.000 20.33 5.31 0.00 4.41
2771 2942 1.946081 TCAGACGTTTTTGCATGCTGA 59.054 42.857 20.33 7.82 0.00 4.26
2772 2943 2.046313 CAGACGTTTTTGCATGCTGAC 58.954 47.619 20.33 10.71 0.00 3.51
2773 2944 1.044725 GACGTTTTTGCATGCTGACG 58.955 50.000 20.33 22.42 36.65 4.35
2774 2945 0.380378 ACGTTTTTGCATGCTGACGT 59.620 45.000 24.53 24.53 38.70 4.34
2775 2946 1.202245 ACGTTTTTGCATGCTGACGTT 60.202 42.857 24.53 14.79 40.34 3.99
2776 2947 1.851666 CGTTTTTGCATGCTGACGTTT 59.148 42.857 20.33 0.00 0.00 3.60
2777 2948 2.281234 CGTTTTTGCATGCTGACGTTTT 59.719 40.909 20.33 0.00 0.00 2.43
2778 2949 3.241932 CGTTTTTGCATGCTGACGTTTTT 60.242 39.130 20.33 0.00 0.00 1.94
2779 2950 3.921969 TTTTGCATGCTGACGTTTTTG 57.078 38.095 20.33 0.00 0.00 2.44
2780 2951 1.207390 TTGCATGCTGACGTTTTTGC 58.793 45.000 20.33 0.00 0.00 3.68
2781 2952 0.101939 TGCATGCTGACGTTTTTGCA 59.898 45.000 20.33 8.03 37.73 4.08
2782 2953 1.207390 GCATGCTGACGTTTTTGCAA 58.793 45.000 11.37 0.00 38.96 4.08
2783 2954 1.190763 GCATGCTGACGTTTTTGCAAG 59.809 47.619 11.37 6.78 38.96 4.01
2784 2955 1.190763 CATGCTGACGTTTTTGCAAGC 59.809 47.619 0.00 0.00 38.96 4.01
2785 2956 0.455410 TGCTGACGTTTTTGCAAGCT 59.545 45.000 0.00 0.00 32.12 3.74
2786 2957 1.673400 TGCTGACGTTTTTGCAAGCTA 59.327 42.857 0.00 0.00 32.12 3.32
2787 2958 2.293122 TGCTGACGTTTTTGCAAGCTAT 59.707 40.909 0.00 0.00 32.12 2.97
2788 2959 2.658325 GCTGACGTTTTTGCAAGCTATG 59.342 45.455 0.00 0.00 0.00 2.23
2789 2960 3.853307 GCTGACGTTTTTGCAAGCTATGT 60.853 43.478 0.00 0.68 0.00 2.29
2790 2961 3.884169 TGACGTTTTTGCAAGCTATGTC 58.116 40.909 16.63 16.63 0.00 3.06
2791 2962 3.313803 TGACGTTTTTGCAAGCTATGTCA 59.686 39.130 19.85 19.85 0.00 3.58
2792 2963 4.201960 TGACGTTTTTGCAAGCTATGTCAA 60.202 37.500 20.76 10.94 31.55 3.18
2793 2964 4.041723 ACGTTTTTGCAAGCTATGTCAAC 58.958 39.130 0.00 0.00 0.00 3.18
2794 2965 4.041049 CGTTTTTGCAAGCTATGTCAACA 58.959 39.130 0.00 0.00 0.00 3.33
2795 2966 4.681025 CGTTTTTGCAAGCTATGTCAACAT 59.319 37.500 0.00 0.70 40.22 2.71
2796 2967 5.387649 CGTTTTTGCAAGCTATGTCAACATG 60.388 40.000 5.89 0.00 37.15 3.21
2797 2968 2.925578 TGCAAGCTATGTCAACATGC 57.074 45.000 5.89 7.47 37.15 4.06
2798 2969 2.161030 TGCAAGCTATGTCAACATGCA 58.839 42.857 5.89 5.22 37.15 3.96
2799 2970 2.557490 TGCAAGCTATGTCAACATGCAA 59.443 40.909 5.89 0.00 37.15 4.08
2800 2971 3.005578 TGCAAGCTATGTCAACATGCAAA 59.994 39.130 5.89 0.00 37.15 3.68
2801 2972 3.989167 GCAAGCTATGTCAACATGCAAAA 59.011 39.130 5.89 0.00 37.15 2.44
2802 2973 4.448395 GCAAGCTATGTCAACATGCAAAAA 59.552 37.500 5.89 0.00 37.15 1.94
2803 2974 5.613142 GCAAGCTATGTCAACATGCAAAAAC 60.613 40.000 5.89 0.00 37.15 2.43
2804 2975 4.229096 AGCTATGTCAACATGCAAAAACG 58.771 39.130 5.89 0.00 37.15 3.60
2805 2976 3.980775 GCTATGTCAACATGCAAAAACGT 59.019 39.130 5.89 0.00 37.15 3.99
2806 2977 4.088496 GCTATGTCAACATGCAAAAACGTC 59.912 41.667 5.89 0.00 37.15 4.34
2807 2978 2.803451 TGTCAACATGCAAAAACGTCC 58.197 42.857 0.00 0.00 0.00 4.79
2808 2979 2.425312 TGTCAACATGCAAAAACGTCCT 59.575 40.909 0.00 0.00 0.00 3.85
2809 2980 3.628032 TGTCAACATGCAAAAACGTCCTA 59.372 39.130 0.00 0.00 0.00 2.94
2810 2981 4.277174 TGTCAACATGCAAAAACGTCCTAT 59.723 37.500 0.00 0.00 0.00 2.57
2811 2982 5.470437 TGTCAACATGCAAAAACGTCCTATA 59.530 36.000 0.00 0.00 0.00 1.31
2812 2983 5.793457 GTCAACATGCAAAAACGTCCTATAC 59.207 40.000 0.00 0.00 0.00 1.47
2813 2984 5.703592 TCAACATGCAAAAACGTCCTATACT 59.296 36.000 0.00 0.00 0.00 2.12
2814 2985 6.874664 TCAACATGCAAAAACGTCCTATACTA 59.125 34.615 0.00 0.00 0.00 1.82
2815 2986 7.551262 TCAACATGCAAAAACGTCCTATACTAT 59.449 33.333 0.00 0.00 0.00 2.12
2816 2987 7.246674 ACATGCAAAAACGTCCTATACTATG 57.753 36.000 0.00 0.00 0.00 2.23
2817 2988 7.045416 ACATGCAAAAACGTCCTATACTATGA 58.955 34.615 0.00 0.00 0.00 2.15
2818 2989 7.224753 ACATGCAAAAACGTCCTATACTATGAG 59.775 37.037 0.00 0.00 0.00 2.90
2819 2990 6.869695 TGCAAAAACGTCCTATACTATGAGA 58.130 36.000 0.00 0.00 0.00 3.27
2820 2991 7.497595 TGCAAAAACGTCCTATACTATGAGAT 58.502 34.615 0.00 0.00 0.00 2.75
2821 2992 8.635328 TGCAAAAACGTCCTATACTATGAGATA 58.365 33.333 0.00 0.00 0.00 1.98
2822 2993 9.130312 GCAAAAACGTCCTATACTATGAGATAG 57.870 37.037 0.00 0.00 38.81 2.08
2826 2997 8.740123 AACGTCCTATACTATGAGATAGATGG 57.260 38.462 0.00 0.00 36.68 3.51
2827 2998 8.091952 ACGTCCTATACTATGAGATAGATGGA 57.908 38.462 0.00 0.00 36.68 3.41
2828 2999 8.208224 ACGTCCTATACTATGAGATAGATGGAG 58.792 40.741 0.00 0.00 36.68 3.86
2829 3000 8.208224 CGTCCTATACTATGAGATAGATGGAGT 58.792 40.741 0.00 0.00 36.68 3.85
2837 3008 8.841757 ACTATGAGATAGATGGAGTAGGTATGT 58.158 37.037 0.00 0.00 36.68 2.29
2838 3009 9.693739 CTATGAGATAGATGGAGTAGGTATGTT 57.306 37.037 0.00 0.00 34.77 2.71
2839 3010 8.964533 ATGAGATAGATGGAGTAGGTATGTTT 57.035 34.615 0.00 0.00 0.00 2.83
2840 3011 8.783660 TGAGATAGATGGAGTAGGTATGTTTT 57.216 34.615 0.00 0.00 0.00 2.43
2841 3012 8.861086 TGAGATAGATGGAGTAGGTATGTTTTC 58.139 37.037 0.00 0.00 0.00 2.29
2842 3013 9.084533 GAGATAGATGGAGTAGGTATGTTTTCT 57.915 37.037 0.00 0.00 0.00 2.52
2843 3014 9.084533 AGATAGATGGAGTAGGTATGTTTTCTC 57.915 37.037 0.00 0.00 0.00 2.87
2844 3015 9.084533 GATAGATGGAGTAGGTATGTTTTCTCT 57.915 37.037 0.00 0.00 0.00 3.10
2856 3027 8.903820 AGGTATGTTTTCTCTATAAATTGCCAC 58.096 33.333 0.00 0.00 0.00 5.01
2857 3028 8.682710 GGTATGTTTTCTCTATAAATTGCCACA 58.317 33.333 0.00 0.00 0.00 4.17
2861 3032 8.902806 TGTTTTCTCTATAAATTGCCACATAGG 58.097 33.333 0.00 0.00 41.84 2.57
2862 3033 8.903820 GTTTTCTCTATAAATTGCCACATAGGT 58.096 33.333 0.00 0.00 40.61 3.08
2863 3034 9.474313 TTTTCTCTATAAATTGCCACATAGGTT 57.526 29.630 0.00 0.00 40.61 3.50
2864 3035 9.474313 TTTCTCTATAAATTGCCACATAGGTTT 57.526 29.630 0.00 0.00 40.61 3.27
2865 3036 9.474313 TTCTCTATAAATTGCCACATAGGTTTT 57.526 29.630 0.00 0.00 40.61 2.43
2872 3043 8.546083 AAATTGCCACATAGGTTTTATATGGA 57.454 30.769 0.00 0.00 40.61 3.41
2873 3044 8.725606 AATTGCCACATAGGTTTTATATGGAT 57.274 30.769 0.00 0.00 40.61 3.41
2874 3045 7.759489 TTGCCACATAGGTTTTATATGGATC 57.241 36.000 0.00 0.00 40.61 3.36
2875 3046 6.245408 TGCCACATAGGTTTTATATGGATCC 58.755 40.000 4.20 4.20 40.61 3.36
2876 3047 6.183361 TGCCACATAGGTTTTATATGGATCCA 60.183 38.462 18.88 18.88 40.61 3.41
2877 3048 6.891908 GCCACATAGGTTTTATATGGATCCAT 59.108 38.462 29.66 29.66 40.61 3.41
2878 3049 7.148018 GCCACATAGGTTTTATATGGATCCATG 60.148 40.741 33.41 17.86 40.61 3.66
2879 3050 7.890127 CCACATAGGTTTTATATGGATCCATGT 59.110 37.037 33.41 29.23 37.82 3.21
2880 3051 8.733458 CACATAGGTTTTATATGGATCCATGTG 58.267 37.037 33.41 24.62 37.82 3.21
2881 3052 8.668653 ACATAGGTTTTATATGGATCCATGTGA 58.331 33.333 33.41 22.59 37.82 3.58
2882 3053 9.519191 CATAGGTTTTATATGGATCCATGTGAA 57.481 33.333 33.41 26.52 37.82 3.18
2883 3054 9.745018 ATAGGTTTTATATGGATCCATGTGAAG 57.255 33.333 33.41 0.00 37.82 3.02
2884 3055 7.815383 AGGTTTTATATGGATCCATGTGAAGA 58.185 34.615 33.41 15.60 37.82 2.87
2885 3056 8.281531 AGGTTTTATATGGATCCATGTGAAGAA 58.718 33.333 33.41 16.41 37.82 2.52
2886 3057 8.912988 GGTTTTATATGGATCCATGTGAAGAAA 58.087 33.333 33.41 20.76 37.82 2.52
2890 3061 9.865152 TTATATGGATCCATGTGAAGAAAATCA 57.135 29.630 33.41 11.99 37.82 2.57
2891 3062 8.951614 ATATGGATCCATGTGAAGAAAATCAT 57.048 30.769 33.41 13.69 37.82 2.45
2892 3063 7.670605 ATGGATCCATGTGAAGAAAATCATT 57.329 32.000 26.78 0.00 35.03 2.57
2893 3064 7.104043 TGGATCCATGTGAAGAAAATCATTC 57.896 36.000 11.44 0.00 0.00 2.67
2894 3065 6.893554 TGGATCCATGTGAAGAAAATCATTCT 59.106 34.615 11.44 0.00 0.00 2.40
2895 3066 7.067859 TGGATCCATGTGAAGAAAATCATTCTC 59.932 37.037 11.44 0.00 0.00 2.87
2896 3067 6.764308 TCCATGTGAAGAAAATCATTCTCC 57.236 37.500 0.00 0.00 0.00 3.71
2897 3068 6.247676 TCCATGTGAAGAAAATCATTCTCCA 58.752 36.000 0.00 0.00 0.00 3.86
2898 3069 6.720748 TCCATGTGAAGAAAATCATTCTCCAA 59.279 34.615 0.00 0.00 0.00 3.53
2899 3070 7.398047 TCCATGTGAAGAAAATCATTCTCCAAT 59.602 33.333 0.00 0.00 0.00 3.16
2900 3071 7.491372 CCATGTGAAGAAAATCATTCTCCAATG 59.509 37.037 0.00 0.00 40.91 2.82
2901 3072 6.392354 TGTGAAGAAAATCATTCTCCAATGC 58.608 36.000 0.00 0.00 39.56 3.56
2902 3073 6.015265 TGTGAAGAAAATCATTCTCCAATGCA 60.015 34.615 0.00 0.00 39.56 3.96
2903 3074 6.869913 GTGAAGAAAATCATTCTCCAATGCAA 59.130 34.615 0.00 0.00 39.56 4.08
2904 3075 7.385752 GTGAAGAAAATCATTCTCCAATGCAAA 59.614 33.333 0.00 0.00 39.56 3.68
2905 3076 7.385752 TGAAGAAAATCATTCTCCAATGCAAAC 59.614 33.333 0.00 0.00 39.56 2.93
2906 3077 6.761312 AGAAAATCATTCTCCAATGCAAACA 58.239 32.000 0.00 0.00 39.56 2.83
2907 3078 6.647895 AGAAAATCATTCTCCAATGCAAACAC 59.352 34.615 0.00 0.00 39.56 3.32
2908 3079 3.557577 TCATTCTCCAATGCAAACACG 57.442 42.857 0.00 0.00 39.56 4.49
2909 3080 3.145286 TCATTCTCCAATGCAAACACGA 58.855 40.909 0.00 0.00 39.56 4.35
2910 3081 3.758023 TCATTCTCCAATGCAAACACGAT 59.242 39.130 0.00 0.00 39.56 3.73
2911 3082 3.829886 TTCTCCAATGCAAACACGATC 57.170 42.857 0.00 0.00 0.00 3.69
2912 3083 3.057969 TCTCCAATGCAAACACGATCT 57.942 42.857 0.00 0.00 0.00 2.75
2913 3084 3.411446 TCTCCAATGCAAACACGATCTT 58.589 40.909 0.00 0.00 0.00 2.40
2914 3085 3.189080 TCTCCAATGCAAACACGATCTTG 59.811 43.478 0.00 0.00 0.00 3.02
2915 3086 2.228582 TCCAATGCAAACACGATCTTGG 59.771 45.455 4.03 3.96 34.37 3.61
2916 3087 2.228582 CCAATGCAAACACGATCTTGGA 59.771 45.455 4.03 0.00 34.88 3.53
2917 3088 3.305267 CCAATGCAAACACGATCTTGGAA 60.305 43.478 4.03 0.00 34.88 3.53
2918 3089 3.837213 ATGCAAACACGATCTTGGAAG 57.163 42.857 4.03 0.00 0.00 3.46
2919 3090 1.266718 TGCAAACACGATCTTGGAAGC 59.733 47.619 4.03 4.88 0.00 3.86
2920 3091 1.401539 GCAAACACGATCTTGGAAGCC 60.402 52.381 4.03 0.00 0.00 4.35
2921 3092 1.200020 CAAACACGATCTTGGAAGCCC 59.800 52.381 4.03 0.00 0.00 5.19
2922 3093 0.400213 AACACGATCTTGGAAGCCCA 59.600 50.000 4.03 0.00 41.64 5.36
2923 3094 0.321653 ACACGATCTTGGAAGCCCAC 60.322 55.000 4.03 0.00 43.41 4.61
2924 3095 0.036010 CACGATCTTGGAAGCCCACT 60.036 55.000 0.00 0.00 43.41 4.00
2925 3096 1.207089 CACGATCTTGGAAGCCCACTA 59.793 52.381 0.00 0.00 43.41 2.74
2926 3097 2.119495 ACGATCTTGGAAGCCCACTAT 58.881 47.619 0.00 0.00 43.41 2.12
2927 3098 2.158900 ACGATCTTGGAAGCCCACTATG 60.159 50.000 0.00 0.00 43.41 2.23
2928 3099 2.808202 CGATCTTGGAAGCCCACTATGG 60.808 54.545 0.00 0.00 43.41 2.74
2946 3117 3.766068 TGGGACAAATACGTGGTAACA 57.234 42.857 0.00 0.00 40.13 2.41
2947 3118 4.082665 TGGGACAAATACGTGGTAACAA 57.917 40.909 0.00 0.00 44.41 2.83
2948 3119 3.814283 TGGGACAAATACGTGGTAACAAC 59.186 43.478 0.00 0.00 44.41 3.32
2949 3120 4.444591 TGGGACAAATACGTGGTAACAACT 60.445 41.667 0.00 0.00 44.41 3.16
2950 3121 6.255330 TGGGACAAATACGTGGTAACAACTC 61.255 44.000 0.00 0.00 44.41 3.01
2951 3122 8.585864 TGGGACAAATACGTGGTAACAACTCA 62.586 42.308 0.00 0.00 44.41 3.41
2959 3130 2.894307 GGTAACAACTCACGGAATGC 57.106 50.000 0.00 0.00 0.00 3.56
2960 3131 2.423577 GGTAACAACTCACGGAATGCT 58.576 47.619 0.00 0.00 0.00 3.79
2961 3132 3.592059 GGTAACAACTCACGGAATGCTA 58.408 45.455 0.00 0.00 0.00 3.49
2962 3133 3.370061 GGTAACAACTCACGGAATGCTAC 59.630 47.826 0.00 0.00 0.00 3.58
2963 3134 2.094762 ACAACTCACGGAATGCTACC 57.905 50.000 0.00 0.00 0.00 3.18
2964 3135 1.338769 ACAACTCACGGAATGCTACCC 60.339 52.381 0.00 0.00 0.00 3.69
2965 3136 0.252197 AACTCACGGAATGCTACCCC 59.748 55.000 0.00 0.00 0.00 4.95
2967 3138 2.895372 CACGGAATGCTACCCCGC 60.895 66.667 0.00 0.00 46.54 6.13
2968 3139 3.395702 ACGGAATGCTACCCCGCA 61.396 61.111 0.00 0.00 46.54 5.69
2969 3140 2.124901 CGGAATGCTACCCCGCAA 60.125 61.111 0.00 0.00 44.06 4.85
2970 3141 2.469516 CGGAATGCTACCCCGCAAC 61.470 63.158 0.00 0.00 44.06 4.17
2971 3142 1.377987 GGAATGCTACCCCGCAACA 60.378 57.895 0.00 0.00 44.06 3.33
2972 3143 0.963355 GGAATGCTACCCCGCAACAA 60.963 55.000 0.00 0.00 44.06 2.83
2973 3144 0.885196 GAATGCTACCCCGCAACAAA 59.115 50.000 0.00 0.00 44.06 2.83
2974 3145 1.271102 GAATGCTACCCCGCAACAAAA 59.729 47.619 0.00 0.00 44.06 2.44
2975 3146 1.333177 ATGCTACCCCGCAACAAAAA 58.667 45.000 0.00 0.00 44.06 1.94
2994 3165 4.914312 AAAAATCACGAAATGCTGCATG 57.086 36.364 17.00 6.40 0.00 4.06
2995 3166 3.581024 AAATCACGAAATGCTGCATGT 57.419 38.095 17.00 11.10 0.00 3.21
2996 3167 3.581024 AATCACGAAATGCTGCATGTT 57.419 38.095 17.00 12.14 0.00 2.71
2997 3168 3.581024 ATCACGAAATGCTGCATGTTT 57.419 38.095 17.00 8.48 0.00 2.83
2998 3169 2.663808 TCACGAAATGCTGCATGTTTG 58.336 42.857 17.00 16.63 0.00 2.93
2999 3170 2.292845 TCACGAAATGCTGCATGTTTGA 59.707 40.909 17.00 13.87 0.00 2.69
3000 3171 2.659757 CACGAAATGCTGCATGTTTGAG 59.340 45.455 17.00 10.70 0.00 3.02
3001 3172 2.256174 CGAAATGCTGCATGTTTGAGG 58.744 47.619 17.00 0.00 0.00 3.86
3002 3173 1.997606 GAAATGCTGCATGTTTGAGGC 59.002 47.619 17.00 0.00 0.00 4.70
3003 3174 0.970640 AATGCTGCATGTTTGAGGCA 59.029 45.000 17.00 0.00 39.61 4.75
3004 3175 0.245539 ATGCTGCATGTTTGAGGCAC 59.754 50.000 15.44 0.00 36.14 5.01
3005 3176 1.108132 TGCTGCATGTTTGAGGCACA 61.108 50.000 0.00 0.00 36.14 4.57
3006 3177 0.665369 GCTGCATGTTTGAGGCACAC 60.665 55.000 0.00 0.00 36.14 3.82
3007 3178 0.386352 CTGCATGTTTGAGGCACACG 60.386 55.000 0.00 0.00 36.14 4.49
3008 3179 0.817229 TGCATGTTTGAGGCACACGA 60.817 50.000 0.00 0.00 36.14 4.35
3009 3180 0.310543 GCATGTTTGAGGCACACGAA 59.689 50.000 0.00 0.00 0.00 3.85
3010 3181 1.925946 GCATGTTTGAGGCACACGAAC 60.926 52.381 0.00 0.00 42.40 3.95
3011 3182 0.586319 ATGTTTGAGGCACACGAACG 59.414 50.000 0.00 0.00 44.48 3.95
3012 3183 0.741574 TGTTTGAGGCACACGAACGT 60.742 50.000 0.00 0.00 44.48 3.99
3013 3184 2.920371 TGTTTGAGGCACACGAACGTG 61.920 52.381 22.68 22.68 44.48 4.49
3022 3193 3.727146 ACGAACGTGAAGGGCAAC 58.273 55.556 0.00 0.00 0.00 4.17
3023 3194 1.153329 ACGAACGTGAAGGGCAACA 60.153 52.632 0.00 0.00 39.74 3.33
3024 3195 0.534203 ACGAACGTGAAGGGCAACAT 60.534 50.000 0.00 0.00 39.74 2.71
3025 3196 0.165944 CGAACGTGAAGGGCAACATC 59.834 55.000 0.00 0.00 39.74 3.06
3026 3197 0.521735 GAACGTGAAGGGCAACATCC 59.478 55.000 0.00 0.00 39.74 3.51
3027 3198 0.179004 AACGTGAAGGGCAACATCCA 60.179 50.000 0.00 0.00 39.74 3.41
3028 3199 0.889186 ACGTGAAGGGCAACATCCAC 60.889 55.000 0.00 0.00 39.74 4.02
3029 3200 1.875963 GTGAAGGGCAACATCCACG 59.124 57.895 0.00 0.00 39.74 4.94
3030 3201 1.971167 TGAAGGGCAACATCCACGC 60.971 57.895 0.00 0.00 39.74 5.34
3031 3202 1.675641 GAAGGGCAACATCCACGCT 60.676 57.895 0.00 0.00 39.74 5.07
3032 3203 1.228552 AAGGGCAACATCCACGCTT 60.229 52.632 0.00 0.00 39.74 4.68
3033 3204 1.526575 AAGGGCAACATCCACGCTTG 61.527 55.000 0.00 0.00 35.53 4.01
3034 3205 1.971167 GGGCAACATCCACGCTTGA 60.971 57.895 0.00 0.00 39.74 3.02
3035 3206 1.315257 GGGCAACATCCACGCTTGAT 61.315 55.000 0.00 0.00 39.74 2.57
3036 3207 1.378531 GGCAACATCCACGCTTGATA 58.621 50.000 0.00 0.00 0.00 2.15
3037 3208 1.331756 GGCAACATCCACGCTTGATAG 59.668 52.381 0.00 0.00 0.00 2.08
3038 3209 2.279741 GCAACATCCACGCTTGATAGA 58.720 47.619 0.00 0.00 0.00 1.98
3039 3210 2.677836 GCAACATCCACGCTTGATAGAA 59.322 45.455 0.00 0.00 0.00 2.10
3040 3211 3.313526 GCAACATCCACGCTTGATAGAAT 59.686 43.478 0.00 0.00 0.00 2.40
3041 3212 4.201950 GCAACATCCACGCTTGATAGAATT 60.202 41.667 0.00 0.00 0.00 2.17
3042 3213 5.007626 GCAACATCCACGCTTGATAGAATTA 59.992 40.000 0.00 0.00 0.00 1.40
3043 3214 6.458206 GCAACATCCACGCTTGATAGAATTAA 60.458 38.462 0.00 0.00 0.00 1.40
3044 3215 6.604735 ACATCCACGCTTGATAGAATTAAC 57.395 37.500 0.00 0.00 0.00 2.01
3045 3216 6.112734 ACATCCACGCTTGATAGAATTAACA 58.887 36.000 0.00 0.00 0.00 2.41
3046 3217 6.597672 ACATCCACGCTTGATAGAATTAACAA 59.402 34.615 0.00 0.00 0.00 2.83
3047 3218 7.283127 ACATCCACGCTTGATAGAATTAACAAT 59.717 33.333 0.00 0.00 0.00 2.71
3048 3219 7.624360 TCCACGCTTGATAGAATTAACAATT 57.376 32.000 0.00 0.00 0.00 2.32
3049 3220 8.050778 TCCACGCTTGATAGAATTAACAATTT 57.949 30.769 0.00 0.00 0.00 1.82
3050 3221 8.519526 TCCACGCTTGATAGAATTAACAATTTT 58.480 29.630 0.00 0.00 0.00 1.82
3051 3222 8.586273 CCACGCTTGATAGAATTAACAATTTTG 58.414 33.333 0.00 0.00 0.00 2.44
3052 3223 9.340695 CACGCTTGATAGAATTAACAATTTTGA 57.659 29.630 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 2.607892 GCAGCAAACTCGAAGCCGT 61.608 57.895 0.00 0.00 37.05 5.68
203 204 2.995258 GCAAAACGCCAACAATCATGAT 59.005 40.909 1.18 1.18 32.94 2.45
257 259 1.408969 AGGGACAACCGTGCAAAAAT 58.591 45.000 0.00 0.00 46.96 1.82
410 413 2.294078 CGAGAGGGCAGGGGTTTCT 61.294 63.158 0.00 0.00 0.00 2.52
459 466 6.968131 AAAAACCAAGTCAAGCTTTCTTTC 57.032 33.333 0.00 0.00 34.69 2.62
548 555 0.928451 GAACAAGCCGAACGTGCAAC 60.928 55.000 0.00 0.00 0.00 4.17
709 765 4.514577 CCATCGTTCGCGGGCTCT 62.515 66.667 6.13 0.00 41.70 4.09
717 773 2.486951 ATCGGAACTACCATCGTTCG 57.513 50.000 0.00 0.00 41.19 3.95
731 787 9.151177 GGTGGGAGGTATAATATATTTATCGGA 57.849 37.037 2.68 0.00 0.00 4.55
732 788 8.373220 GGGTGGGAGGTATAATATATTTATCGG 58.627 40.741 2.68 0.00 0.00 4.18
733 789 8.086522 CGGGTGGGAGGTATAATATATTTATCG 58.913 40.741 2.68 0.00 0.00 2.92
734 790 9.151177 TCGGGTGGGAGGTATAATATATTTATC 57.849 37.037 2.68 0.00 0.00 1.75
735 791 8.931568 GTCGGGTGGGAGGTATAATATATTTAT 58.068 37.037 2.68 0.00 0.00 1.40
736 792 7.345392 GGTCGGGTGGGAGGTATAATATATTTA 59.655 40.741 2.68 0.00 0.00 1.40
737 793 6.157471 GGTCGGGTGGGAGGTATAATATATTT 59.843 42.308 2.68 0.00 0.00 1.40
738 794 5.664457 GGTCGGGTGGGAGGTATAATATATT 59.336 44.000 2.97 2.97 0.00 1.28
739 795 5.042827 AGGTCGGGTGGGAGGTATAATATAT 60.043 44.000 0.00 0.00 0.00 0.86
740 796 4.295775 AGGTCGGGTGGGAGGTATAATATA 59.704 45.833 0.00 0.00 0.00 0.86
741 797 3.078612 AGGTCGGGTGGGAGGTATAATAT 59.921 47.826 0.00 0.00 0.00 1.28
767 832 2.413765 GATCCACCCTCGTCGAGC 59.586 66.667 17.02 0.00 0.00 5.03
1009 1091 4.717313 GTCGGGCCCAACCACCTC 62.717 72.222 24.92 0.00 42.05 3.85
1114 1199 1.949847 CTGTCAGGGAAGGTCGCGAT 61.950 60.000 14.06 0.00 34.19 4.58
1143 1228 0.608640 AGCAGTAGAGGTTCAACCCG 59.391 55.000 1.75 0.00 39.75 5.28
1225 1331 2.812178 CCACGTCGCGGGGTTAAG 60.812 66.667 6.13 0.00 46.51 1.85
1294 1415 0.251653 TAGAAGCCGGACTCCTGTGT 60.252 55.000 5.05 0.00 0.00 3.72
1344 1465 1.285023 GTACGAGACGTGGCACAGT 59.715 57.895 19.09 15.93 41.80 3.55
1472 1593 0.755698 GTAGGCGATGGTCTCCTCCA 60.756 60.000 0.00 0.00 42.01 3.86
1501 1631 0.250901 CATCGGGATTTAGGGGGCAG 60.251 60.000 0.00 0.00 0.00 4.85
1505 1635 1.142870 TGAAGCATCGGGATTTAGGGG 59.857 52.381 0.00 0.00 0.00 4.79
1506 1636 2.638480 TGAAGCATCGGGATTTAGGG 57.362 50.000 0.00 0.00 0.00 3.53
1596 1726 1.745489 GAACGCCACCATCTGACCC 60.745 63.158 0.00 0.00 0.00 4.46
1598 1728 1.080093 TCGAACGCCACCATCTGAC 60.080 57.895 0.00 0.00 0.00 3.51
1599 1729 1.080093 GTCGAACGCCACCATCTGA 60.080 57.895 0.00 0.00 0.00 3.27
1704 1834 3.479203 CCCAGCTCGGCCACCATA 61.479 66.667 2.24 0.00 0.00 2.74
1728 1858 3.369892 CGAGAAACCAGAGGTCCATGAAT 60.370 47.826 0.00 0.00 33.12 2.57
1953 2092 1.258676 GTGACGGGAGAAGAAGAGGT 58.741 55.000 0.00 0.00 0.00 3.85
2051 2193 1.718757 GACATCAACTCATGGGCCGC 61.719 60.000 0.00 0.00 0.00 6.53
2053 2195 1.097547 CGGACATCAACTCATGGGCC 61.098 60.000 0.00 0.00 0.00 5.80
2069 2215 2.974148 GCATGGCATCGCATCGGA 60.974 61.111 14.33 0.00 0.00 4.55
2070 2216 4.379143 CGCATGGCATCGCATCGG 62.379 66.667 17.71 0.00 0.00 4.18
2082 2228 4.397090 TTTGGAACCGCGCGCATG 62.397 61.111 32.61 23.41 0.00 4.06
2083 2229 4.398598 GTTTGGAACCGCGCGCAT 62.399 61.111 32.61 16.29 0.00 4.73
2086 2232 3.295228 CTCTGTTTGGAACCGCGCG 62.295 63.158 25.67 25.67 0.00 6.86
2096 2242 3.303395 GCGGTGTTCTTCTTCTCTGTTTG 60.303 47.826 0.00 0.00 0.00 2.93
2097 2243 2.872858 GCGGTGTTCTTCTTCTCTGTTT 59.127 45.455 0.00 0.00 0.00 2.83
2116 2264 1.467374 CCAGTTTAATTTGGAGCCGCG 60.467 52.381 0.00 0.00 36.55 6.46
2125 2273 2.888212 TGGCTGCCTCCAGTTTAATTT 58.112 42.857 21.03 0.00 41.26 1.82
2126 2274 2.603075 TGGCTGCCTCCAGTTTAATT 57.397 45.000 21.03 0.00 41.26 1.40
2127 2275 2.243221 AGATGGCTGCCTCCAGTTTAAT 59.757 45.455 21.03 0.67 41.26 1.40
2128 2276 1.635487 AGATGGCTGCCTCCAGTTTAA 59.365 47.619 21.03 0.00 41.26 1.52
2129 2277 1.289160 AGATGGCTGCCTCCAGTTTA 58.711 50.000 21.03 0.00 41.26 2.01
2130 2278 1.065126 GTAGATGGCTGCCTCCAGTTT 60.065 52.381 21.03 1.32 41.26 2.66
2133 2281 0.392336 GAGTAGATGGCTGCCTCCAG 59.608 60.000 21.03 0.00 39.89 3.86
2134 2282 1.050988 GGAGTAGATGGCTGCCTCCA 61.051 60.000 21.03 0.00 40.54 3.86
2135 2283 1.050988 TGGAGTAGATGGCTGCCTCC 61.051 60.000 21.03 16.95 40.91 4.30
2149 2300 1.206132 TGCGGTCGTCAAATATGGAGT 59.794 47.619 0.00 0.00 0.00 3.85
2150 2301 1.934589 TGCGGTCGTCAAATATGGAG 58.065 50.000 0.00 0.00 0.00 3.86
2151 2302 2.388310 TTGCGGTCGTCAAATATGGA 57.612 45.000 0.00 0.00 0.00 3.41
2152 2303 3.168193 GTTTTGCGGTCGTCAAATATGG 58.832 45.455 11.39 0.00 33.94 2.74
2153 2304 3.816091 TGTTTTGCGGTCGTCAAATATG 58.184 40.909 11.39 0.00 33.94 1.78
2160 2311 0.933047 GCCTTTGTTTTGCGGTCGTC 60.933 55.000 0.00 0.00 0.00 4.20
2164 2315 0.809636 GCAAGCCTTTGTTTTGCGGT 60.810 50.000 0.00 0.00 37.97 5.68
2198 2364 6.382859 TGGTCTCAGCATAATAACTAACTCCA 59.617 38.462 0.00 0.00 0.00 3.86
2209 2375 9.632638 AAACTATTAACATGGTCTCAGCATAAT 57.367 29.630 0.00 0.00 34.09 1.28
2211 2377 8.046708 ACAAACTATTAACATGGTCTCAGCATA 58.953 33.333 0.00 0.00 34.09 3.14
2212 2378 6.886459 ACAAACTATTAACATGGTCTCAGCAT 59.114 34.615 0.00 0.00 36.65 3.79
2279 2450 4.298626 ACCCACCATGTCACTATGAGTAT 58.701 43.478 0.00 0.00 0.00 2.12
2280 2451 3.719871 ACCCACCATGTCACTATGAGTA 58.280 45.455 0.00 0.00 0.00 2.59
2289 2460 1.723288 TGTCTGTACCCACCATGTCA 58.277 50.000 0.00 0.00 0.00 3.58
2290 2461 2.812011 GTTTGTCTGTACCCACCATGTC 59.188 50.000 0.00 0.00 0.00 3.06
2305 2476 9.220767 ACTGAAGTTCCAAATATAGAGTTTGTC 57.779 33.333 0.00 0.00 35.35 3.18
2363 2534 6.770286 AATGGATGTATCTGGGAGTACAAT 57.230 37.500 0.00 0.00 34.77 2.71
2365 2536 5.665360 TCAAATGGATGTATCTGGGAGTACA 59.335 40.000 0.00 0.00 35.49 2.90
2366 2537 6.174720 TCAAATGGATGTATCTGGGAGTAC 57.825 41.667 0.00 0.00 0.00 2.73
2367 2538 5.221722 GCTCAAATGGATGTATCTGGGAGTA 60.222 44.000 0.00 0.00 0.00 2.59
2368 2539 4.445448 GCTCAAATGGATGTATCTGGGAGT 60.445 45.833 0.00 0.00 0.00 3.85
2369 2540 4.070716 GCTCAAATGGATGTATCTGGGAG 58.929 47.826 0.00 0.00 0.00 4.30
2370 2541 3.459227 TGCTCAAATGGATGTATCTGGGA 59.541 43.478 0.00 0.00 0.00 4.37
2371 2542 3.567164 GTGCTCAAATGGATGTATCTGGG 59.433 47.826 0.00 0.00 0.00 4.45
2372 2543 4.201657 TGTGCTCAAATGGATGTATCTGG 58.798 43.478 0.00 0.00 0.00 3.86
2373 2544 5.356190 ACTTGTGCTCAAATGGATGTATCTG 59.644 40.000 2.44 0.00 32.87 2.90
2374 2545 5.356190 CACTTGTGCTCAAATGGATGTATCT 59.644 40.000 2.16 0.00 32.87 1.98
2375 2546 5.124457 ACACTTGTGCTCAAATGGATGTATC 59.876 40.000 13.72 0.00 35.46 2.24
2376 2547 5.012239 ACACTTGTGCTCAAATGGATGTAT 58.988 37.500 13.72 0.00 35.46 2.29
2377 2548 4.397420 ACACTTGTGCTCAAATGGATGTA 58.603 39.130 13.72 0.00 35.46 2.29
2378 2549 3.225104 ACACTTGTGCTCAAATGGATGT 58.775 40.909 13.72 5.80 35.46 3.06
2379 2550 3.928727 ACACTTGTGCTCAAATGGATG 57.071 42.857 13.72 5.28 35.46 3.51
2380 2551 7.201848 CCATATTACACTTGTGCTCAAATGGAT 60.202 37.037 13.72 9.62 35.46 3.41
2381 2552 6.095300 CCATATTACACTTGTGCTCAAATGGA 59.905 38.462 13.72 2.86 35.46 3.41
2382 2553 6.095300 TCCATATTACACTTGTGCTCAAATGG 59.905 38.462 13.72 14.61 35.46 3.16
2383 2554 7.087409 TCCATATTACACTTGTGCTCAAATG 57.913 36.000 8.29 8.29 36.92 2.32
2384 2555 7.254898 CGATCCATATTACACTTGTGCTCAAAT 60.255 37.037 2.44 0.00 32.87 2.32
2385 2556 6.037062 CGATCCATATTACACTTGTGCTCAAA 59.963 38.462 2.44 0.00 32.87 2.69
2386 2557 5.523552 CGATCCATATTACACTTGTGCTCAA 59.476 40.000 0.66 0.66 0.00 3.02
2387 2558 5.049828 CGATCCATATTACACTTGTGCTCA 58.950 41.667 0.10 0.00 0.00 4.26
2388 2559 4.449068 CCGATCCATATTACACTTGTGCTC 59.551 45.833 0.10 0.00 0.00 4.26
2389 2560 4.100963 TCCGATCCATATTACACTTGTGCT 59.899 41.667 0.10 0.00 0.00 4.40
2390 2561 4.377021 TCCGATCCATATTACACTTGTGC 58.623 43.478 0.10 0.00 0.00 4.57
2391 2562 5.409520 CCATCCGATCCATATTACACTTGTG 59.590 44.000 0.00 0.00 0.00 3.33
2392 2563 5.306937 TCCATCCGATCCATATTACACTTGT 59.693 40.000 0.00 0.00 0.00 3.16
2393 2564 5.793817 TCCATCCGATCCATATTACACTTG 58.206 41.667 0.00 0.00 0.00 3.16
2394 2565 5.544176 ACTCCATCCGATCCATATTACACTT 59.456 40.000 0.00 0.00 0.00 3.16
2395 2566 5.087323 ACTCCATCCGATCCATATTACACT 58.913 41.667 0.00 0.00 0.00 3.55
2396 2567 5.407407 ACTCCATCCGATCCATATTACAC 57.593 43.478 0.00 0.00 0.00 2.90
2397 2568 7.547697 TTTACTCCATCCGATCCATATTACA 57.452 36.000 0.00 0.00 0.00 2.41
2401 2572 9.618890 CAATTATTTACTCCATCCGATCCATAT 57.381 33.333 0.00 0.00 0.00 1.78
2402 2573 8.602424 ACAATTATTTACTCCATCCGATCCATA 58.398 33.333 0.00 0.00 0.00 2.74
2403 2574 7.461749 ACAATTATTTACTCCATCCGATCCAT 58.538 34.615 0.00 0.00 0.00 3.41
2404 2575 6.837312 ACAATTATTTACTCCATCCGATCCA 58.163 36.000 0.00 0.00 0.00 3.41
2405 2576 7.584987 CAACAATTATTTACTCCATCCGATCC 58.415 38.462 0.00 0.00 0.00 3.36
2406 2577 7.078228 GCAACAATTATTTACTCCATCCGATC 58.922 38.462 0.00 0.00 0.00 3.69
2407 2578 6.545666 TGCAACAATTATTTACTCCATCCGAT 59.454 34.615 0.00 0.00 0.00 4.18
2408 2579 5.883115 TGCAACAATTATTTACTCCATCCGA 59.117 36.000 0.00 0.00 0.00 4.55
2409 2580 6.130298 TGCAACAATTATTTACTCCATCCG 57.870 37.500 0.00 0.00 0.00 4.18
2410 2581 6.925165 CCATGCAACAATTATTTACTCCATCC 59.075 38.462 0.00 0.00 0.00 3.51
2411 2582 7.715657 TCCATGCAACAATTATTTACTCCATC 58.284 34.615 0.00 0.00 0.00 3.51
2412 2583 7.560991 TCTCCATGCAACAATTATTTACTCCAT 59.439 33.333 0.00 0.00 0.00 3.41
2413 2584 6.889177 TCTCCATGCAACAATTATTTACTCCA 59.111 34.615 0.00 0.00 0.00 3.86
2414 2585 7.283127 TCTCTCCATGCAACAATTATTTACTCC 59.717 37.037 0.00 0.00 0.00 3.85
2415 2586 8.213518 TCTCTCCATGCAACAATTATTTACTC 57.786 34.615 0.00 0.00 0.00 2.59
2416 2587 8.579850 TTCTCTCCATGCAACAATTATTTACT 57.420 30.769 0.00 0.00 0.00 2.24
2427 2598 5.078411 TCTACTCTTTCTCTCCATGCAAC 57.922 43.478 0.00 0.00 0.00 4.17
2434 2605 5.407084 GCTTGTGTTTCTACTCTTTCTCTCC 59.593 44.000 0.00 0.00 0.00 3.71
2442 2613 7.048512 AGTTTACTTGCTTGTGTTTCTACTCT 58.951 34.615 0.00 0.00 0.00 3.24
2477 2648 8.809468 TGCAGGTTATGGTAAACACATTATAA 57.191 30.769 0.00 0.00 0.00 0.98
2486 2657 5.357032 AGCTACATTGCAGGTTATGGTAAAC 59.643 40.000 1.44 0.00 34.99 2.01
2492 2663 5.586243 ACACTTAGCTACATTGCAGGTTATG 59.414 40.000 0.00 0.00 34.99 1.90
2498 2669 6.668541 AACATACACTTAGCTACATTGCAG 57.331 37.500 0.00 0.00 34.99 4.41
2523 2694 5.452777 AGCTCGAGAAAGTGCAAATTAAAC 58.547 37.500 18.75 0.00 33.52 2.01
2545 2716 1.000163 AGTACTATCATCGCCGGCAAG 60.000 52.381 28.98 15.51 0.00 4.01
2546 2717 1.037493 AGTACTATCATCGCCGGCAA 58.963 50.000 28.98 9.13 0.00 4.52
2547 2718 1.000607 GAAGTACTATCATCGCCGGCA 60.001 52.381 28.98 14.46 0.00 5.69
2548 2719 1.000607 TGAAGTACTATCATCGCCGGC 60.001 52.381 19.07 19.07 0.00 6.13
2549 2720 3.050619 GTTGAAGTACTATCATCGCCGG 58.949 50.000 0.00 0.00 0.00 6.13
2550 2721 3.702330 TGTTGAAGTACTATCATCGCCG 58.298 45.455 0.00 0.00 0.00 6.46
2551 2722 6.604735 AATTGTTGAAGTACTATCATCGCC 57.395 37.500 0.00 0.00 0.00 5.54
2552 2723 8.788813 CAAAAATTGTTGAAGTACTATCATCGC 58.211 33.333 1.78 0.00 0.00 4.58
2553 2724 8.788813 GCAAAAATTGTTGAAGTACTATCATCG 58.211 33.333 12.75 0.00 0.00 3.84
2554 2725 9.846248 AGCAAAAATTGTTGAAGTACTATCATC 57.154 29.630 12.75 2.99 0.00 2.92
2556 2727 9.462174 CAAGCAAAAATTGTTGAAGTACTATCA 57.538 29.630 12.75 0.00 0.00 2.15
2557 2728 9.463443 ACAAGCAAAAATTGTTGAAGTACTATC 57.537 29.630 12.75 0.00 37.61 2.08
2559 2730 9.724839 GTACAAGCAAAAATTGTTGAAGTACTA 57.275 29.630 12.75 0.00 41.08 1.82
2560 2731 8.247562 TGTACAAGCAAAAATTGTTGAAGTACT 58.752 29.630 23.78 8.75 41.08 2.73
2561 2732 8.318167 GTGTACAAGCAAAAATTGTTGAAGTAC 58.682 33.333 20.30 20.30 41.08 2.73
2562 2733 8.029522 TGTGTACAAGCAAAAATTGTTGAAGTA 58.970 29.630 12.75 7.94 41.08 2.24
2563 2734 6.870965 TGTGTACAAGCAAAAATTGTTGAAGT 59.129 30.769 12.75 8.83 41.08 3.01
2564 2735 7.288317 TGTGTACAAGCAAAAATTGTTGAAG 57.712 32.000 12.75 3.43 41.08 3.02
2565 2736 7.332926 ACATGTGTACAAGCAAAAATTGTTGAA 59.667 29.630 12.75 0.00 41.08 2.69
2566 2737 6.815641 ACATGTGTACAAGCAAAAATTGTTGA 59.184 30.769 12.75 0.00 41.08 3.18
2567 2738 7.002816 ACATGTGTACAAGCAAAAATTGTTG 57.997 32.000 3.80 3.80 41.08 3.33
2568 2739 7.041107 AGACATGTGTACAAGCAAAAATTGTT 58.959 30.769 1.15 0.00 41.08 2.83
2569 2740 6.572519 AGACATGTGTACAAGCAAAAATTGT 58.427 32.000 1.15 0.00 43.15 2.71
2570 2741 8.746922 ATAGACATGTGTACAAGCAAAAATTG 57.253 30.769 1.15 0.00 0.00 2.32
2571 2742 8.796475 AGATAGACATGTGTACAAGCAAAAATT 58.204 29.630 1.15 0.00 0.00 1.82
2572 2743 8.340618 AGATAGACATGTGTACAAGCAAAAAT 57.659 30.769 1.15 0.00 0.00 1.82
2573 2744 7.744087 AGATAGACATGTGTACAAGCAAAAA 57.256 32.000 1.15 0.00 0.00 1.94
2574 2745 9.098355 GATAGATAGACATGTGTACAAGCAAAA 57.902 33.333 1.15 0.00 0.00 2.44
2575 2746 7.435192 CGATAGATAGACATGTGTACAAGCAAA 59.565 37.037 1.15 0.00 39.76 3.68
2576 2747 6.918022 CGATAGATAGACATGTGTACAAGCAA 59.082 38.462 1.15 0.00 39.76 3.91
2577 2748 6.039382 ACGATAGATAGACATGTGTACAAGCA 59.961 38.462 1.15 0.00 41.38 3.91
2578 2749 6.360947 CACGATAGATAGACATGTGTACAAGC 59.639 42.308 1.15 0.00 41.38 4.01
2579 2750 6.858478 CCACGATAGATAGACATGTGTACAAG 59.142 42.308 1.15 0.00 41.38 3.16
2580 2751 6.238925 CCCACGATAGATAGACATGTGTACAA 60.239 42.308 1.15 0.00 41.38 2.41
2581 2752 5.240844 CCCACGATAGATAGACATGTGTACA 59.759 44.000 1.15 0.00 41.38 2.90
2582 2753 5.241064 ACCCACGATAGATAGACATGTGTAC 59.759 44.000 1.15 0.00 41.38 2.90
2583 2754 5.382616 ACCCACGATAGATAGACATGTGTA 58.617 41.667 1.15 3.41 41.38 2.90
2584 2755 4.215908 ACCCACGATAGATAGACATGTGT 58.784 43.478 1.15 0.22 41.38 3.72
2585 2756 4.855715 ACCCACGATAGATAGACATGTG 57.144 45.455 1.15 0.00 41.38 3.21
2586 2757 5.871396 AAACCCACGATAGATAGACATGT 57.129 39.130 0.00 0.00 41.38 3.21
2587 2758 8.657074 TTAAAAACCCACGATAGATAGACATG 57.343 34.615 0.00 0.00 41.38 3.21
2588 2759 9.675464 TTTTAAAAACCCACGATAGATAGACAT 57.325 29.630 0.00 0.00 41.38 3.06
2589 2760 9.675464 ATTTTAAAAACCCACGATAGATAGACA 57.325 29.630 4.44 0.00 41.38 3.41
2620 2791 9.959749 TCGAGAAAGTGCAAATTAAATTAAGTT 57.040 25.926 0.00 0.00 0.00 2.66
2621 2792 9.612620 CTCGAGAAAGTGCAAATTAAATTAAGT 57.387 29.630 6.58 0.00 0.00 2.24
2622 2793 9.612620 ACTCGAGAAAGTGCAAATTAAATTAAG 57.387 29.630 21.68 0.00 0.00 1.85
2623 2794 9.959749 AACTCGAGAAAGTGCAAATTAAATTAA 57.040 25.926 21.68 0.00 0.00 1.40
2624 2795 9.959749 AAACTCGAGAAAGTGCAAATTAAATTA 57.040 25.926 21.68 0.00 0.00 1.40
2625 2796 8.755018 CAAACTCGAGAAAGTGCAAATTAAATT 58.245 29.630 21.68 0.00 0.00 1.82
2626 2797 7.096065 GCAAACTCGAGAAAGTGCAAATTAAAT 60.096 33.333 21.68 0.00 0.00 1.40
2627 2798 6.198216 GCAAACTCGAGAAAGTGCAAATTAAA 59.802 34.615 21.68 0.00 0.00 1.52
2628 2799 5.685511 GCAAACTCGAGAAAGTGCAAATTAA 59.314 36.000 21.68 0.00 0.00 1.40
2629 2800 5.212194 GCAAACTCGAGAAAGTGCAAATTA 58.788 37.500 21.68 0.00 0.00 1.40
2630 2801 4.044426 GCAAACTCGAGAAAGTGCAAATT 58.956 39.130 21.68 0.00 0.00 1.82
2631 2802 3.550842 GGCAAACTCGAGAAAGTGCAAAT 60.551 43.478 21.68 0.00 0.00 2.32
2632 2803 2.223479 GGCAAACTCGAGAAAGTGCAAA 60.223 45.455 21.68 0.00 0.00 3.68
2633 2804 1.333619 GGCAAACTCGAGAAAGTGCAA 59.666 47.619 21.68 0.00 0.00 4.08
2634 2805 0.944386 GGCAAACTCGAGAAAGTGCA 59.056 50.000 21.68 0.00 0.00 4.57
2635 2806 0.944386 TGGCAAACTCGAGAAAGTGC 59.056 50.000 21.68 19.99 0.00 4.40
2636 2807 2.032549 CACTGGCAAACTCGAGAAAGTG 60.033 50.000 21.68 16.86 0.00 3.16
2637 2808 2.213499 CACTGGCAAACTCGAGAAAGT 58.787 47.619 21.68 9.63 0.00 2.66
2638 2809 1.532868 CCACTGGCAAACTCGAGAAAG 59.467 52.381 21.68 8.86 0.00 2.62
2639 2810 1.134220 ACCACTGGCAAACTCGAGAAA 60.134 47.619 21.68 0.00 0.00 2.52
2640 2811 0.468226 ACCACTGGCAAACTCGAGAA 59.532 50.000 21.68 0.00 0.00 2.87
2641 2812 0.249868 CACCACTGGCAAACTCGAGA 60.250 55.000 21.68 0.00 0.00 4.04
2642 2813 0.249868 TCACCACTGGCAAACTCGAG 60.250 55.000 11.84 11.84 0.00 4.04
2643 2814 0.396435 ATCACCACTGGCAAACTCGA 59.604 50.000 0.00 0.00 0.00 4.04
2644 2815 2.002586 CTATCACCACTGGCAAACTCG 58.997 52.381 0.00 0.00 0.00 4.18
2645 2816 3.059352 ACTATCACCACTGGCAAACTC 57.941 47.619 0.00 0.00 0.00 3.01
2646 2817 3.583086 AGTACTATCACCACTGGCAAACT 59.417 43.478 0.00 0.00 0.00 2.66
2647 2818 3.939066 AGTACTATCACCACTGGCAAAC 58.061 45.455 0.00 0.00 0.00 2.93
2655 2826 9.180678 CAAAAATTGTTGAAGTACTATCACCAC 57.819 33.333 1.78 0.23 0.00 4.16
2656 2827 7.865385 GCAAAAATTGTTGAAGTACTATCACCA 59.135 33.333 12.75 0.00 0.00 4.17
2658 2829 8.795786 TGCAAAAATTGTTGAAGTACTATCAC 57.204 30.769 12.75 0.00 0.00 3.06
2662 2833 9.672086 GTACATGCAAAAATTGTTGAAGTACTA 57.328 29.630 12.75 0.00 33.51 1.82
2664 2835 8.265998 GTGTACATGCAAAAATTGTTGAAGTAC 58.734 33.333 20.30 20.30 35.01 2.73
2685 2856 5.241064 ACCCACGATAGATAGACATGTGTAC 59.759 44.000 1.15 0.00 41.38 2.90
2688 2859 4.855715 ACCCACGATAGATAGACATGTG 57.144 45.455 1.15 0.00 41.38 3.21
2689 2860 5.871396 AAACCCACGATAGATAGACATGT 57.129 39.130 0.00 0.00 41.38 3.21
2732 2903 6.477033 CGTCTGATATTGTAAAACTGAGGGAG 59.523 42.308 0.00 0.00 0.00 4.30
2733 2904 6.070995 ACGTCTGATATTGTAAAACTGAGGGA 60.071 38.462 0.00 0.00 0.00 4.20
2734 2905 6.106673 ACGTCTGATATTGTAAAACTGAGGG 58.893 40.000 0.00 0.00 0.00 4.30
2735 2906 7.596749 AACGTCTGATATTGTAAAACTGAGG 57.403 36.000 0.00 0.00 0.00 3.86
2736 2907 9.878599 AAAAACGTCTGATATTGTAAAACTGAG 57.121 29.630 0.00 0.00 0.00 3.35
2737 2908 9.658475 CAAAAACGTCTGATATTGTAAAACTGA 57.342 29.630 0.00 0.00 0.00 3.41
2738 2909 8.417176 GCAAAAACGTCTGATATTGTAAAACTG 58.583 33.333 0.00 0.00 0.00 3.16
2739 2910 8.132362 TGCAAAAACGTCTGATATTGTAAAACT 58.868 29.630 0.00 0.00 0.00 2.66
2740 2911 8.276060 TGCAAAAACGTCTGATATTGTAAAAC 57.724 30.769 0.00 0.00 0.00 2.43
2741 2912 8.910666 CATGCAAAAACGTCTGATATTGTAAAA 58.089 29.630 0.00 0.00 0.00 1.52
2742 2913 7.061673 GCATGCAAAAACGTCTGATATTGTAAA 59.938 33.333 14.21 0.00 0.00 2.01
2743 2914 6.526325 GCATGCAAAAACGTCTGATATTGTAA 59.474 34.615 14.21 0.00 0.00 2.41
2744 2915 6.027131 GCATGCAAAAACGTCTGATATTGTA 58.973 36.000 14.21 0.00 0.00 2.41
2745 2916 4.858692 GCATGCAAAAACGTCTGATATTGT 59.141 37.500 14.21 0.00 0.00 2.71
2746 2917 5.004061 CAGCATGCAAAAACGTCTGATATTG 59.996 40.000 21.98 0.00 0.00 1.90
2747 2918 5.097529 CAGCATGCAAAAACGTCTGATATT 58.902 37.500 21.98 0.00 0.00 1.28
2748 2919 4.395854 TCAGCATGCAAAAACGTCTGATAT 59.604 37.500 21.98 0.00 34.76 1.63
2749 2920 3.750652 TCAGCATGCAAAAACGTCTGATA 59.249 39.130 21.98 0.00 34.76 2.15
2750 2921 2.553602 TCAGCATGCAAAAACGTCTGAT 59.446 40.909 21.98 0.00 34.76 2.90
2751 2922 1.946081 TCAGCATGCAAAAACGTCTGA 59.054 42.857 21.98 8.45 34.76 3.27
2752 2923 2.046313 GTCAGCATGCAAAAACGTCTG 58.954 47.619 21.98 5.93 34.76 3.51
2753 2924 1.334059 CGTCAGCATGCAAAAACGTCT 60.334 47.619 21.98 0.00 34.76 4.18
2754 2925 1.044725 CGTCAGCATGCAAAAACGTC 58.955 50.000 21.98 0.42 34.76 4.34
2755 2926 0.380378 ACGTCAGCATGCAAAAACGT 59.620 45.000 24.42 24.42 38.40 3.99
2756 2927 1.476074 AACGTCAGCATGCAAAAACG 58.524 45.000 21.98 22.90 34.76 3.60
2757 2928 3.923827 AAAACGTCAGCATGCAAAAAC 57.076 38.095 21.98 10.74 34.76 2.43
2758 2929 3.484886 GCAAAAACGTCAGCATGCAAAAA 60.485 39.130 21.98 0.00 34.76 1.94
2759 2930 2.030213 GCAAAAACGTCAGCATGCAAAA 59.970 40.909 21.98 0.93 34.76 2.44
2760 2931 1.592081 GCAAAAACGTCAGCATGCAAA 59.408 42.857 21.98 3.89 34.76 3.68
2761 2932 1.207390 GCAAAAACGTCAGCATGCAA 58.793 45.000 21.98 4.32 34.76 4.08
2762 2933 0.101939 TGCAAAAACGTCAGCATGCA 59.898 45.000 21.98 9.45 41.08 3.96
2763 2934 1.190763 CTTGCAAAAACGTCAGCATGC 59.809 47.619 10.51 10.51 36.80 4.06
2764 2935 1.190763 GCTTGCAAAAACGTCAGCATG 59.809 47.619 0.00 8.36 36.80 4.06
2765 2936 1.067516 AGCTTGCAAAAACGTCAGCAT 59.932 42.857 0.00 0.00 36.80 3.79
2766 2937 0.455410 AGCTTGCAAAAACGTCAGCA 59.545 45.000 0.00 0.00 34.79 4.41
2767 2938 2.399396 TAGCTTGCAAAAACGTCAGC 57.601 45.000 0.00 0.00 0.00 4.26
2768 2939 3.888934 ACATAGCTTGCAAAAACGTCAG 58.111 40.909 0.00 0.00 0.00 3.51
2769 2940 3.313803 TGACATAGCTTGCAAAAACGTCA 59.686 39.130 0.00 7.37 0.00 4.35
2770 2941 3.884169 TGACATAGCTTGCAAAAACGTC 58.116 40.909 0.00 4.80 0.00 4.34
2771 2942 3.980646 TGACATAGCTTGCAAAAACGT 57.019 38.095 0.00 0.00 0.00 3.99
2772 2943 4.041049 TGTTGACATAGCTTGCAAAAACG 58.959 39.130 0.00 0.00 0.00 3.60
2773 2944 5.613142 GCATGTTGACATAGCTTGCAAAAAC 60.613 40.000 0.00 0.00 39.44 2.43
2774 2945 4.448395 GCATGTTGACATAGCTTGCAAAAA 59.552 37.500 0.00 0.00 39.44 1.94
2775 2946 3.989167 GCATGTTGACATAGCTTGCAAAA 59.011 39.130 0.00 0.00 39.44 2.44
2776 2947 3.005578 TGCATGTTGACATAGCTTGCAAA 59.994 39.130 0.00 0.00 43.93 3.68
2777 2948 2.557490 TGCATGTTGACATAGCTTGCAA 59.443 40.909 0.00 0.00 43.93 4.08
2778 2949 2.161030 TGCATGTTGACATAGCTTGCA 58.839 42.857 14.79 10.82 44.41 4.08
2779 2950 2.925578 TGCATGTTGACATAGCTTGC 57.074 45.000 14.79 8.91 39.87 4.01
2780 2951 5.387649 CGTTTTTGCATGTTGACATAGCTTG 60.388 40.000 14.79 0.00 34.26 4.01
2781 2952 4.681025 CGTTTTTGCATGTTGACATAGCTT 59.319 37.500 14.79 0.00 34.26 3.74
2782 2953 4.229096 CGTTTTTGCATGTTGACATAGCT 58.771 39.130 14.79 0.00 34.26 3.32
2783 2954 3.980775 ACGTTTTTGCATGTTGACATAGC 59.019 39.130 0.00 4.39 34.26 2.97
2784 2955 4.616802 GGACGTTTTTGCATGTTGACATAG 59.383 41.667 0.00 0.00 34.26 2.23
2785 2956 4.277174 AGGACGTTTTTGCATGTTGACATA 59.723 37.500 0.00 0.00 34.26 2.29
2786 2957 3.068024 AGGACGTTTTTGCATGTTGACAT 59.932 39.130 0.00 0.00 36.96 3.06
2787 2958 2.425312 AGGACGTTTTTGCATGTTGACA 59.575 40.909 0.00 0.00 0.00 3.58
2788 2959 3.078594 AGGACGTTTTTGCATGTTGAC 57.921 42.857 0.00 0.00 0.00 3.18
2789 2960 5.703592 AGTATAGGACGTTTTTGCATGTTGA 59.296 36.000 0.00 0.00 0.00 3.18
2790 2961 5.938322 AGTATAGGACGTTTTTGCATGTTG 58.062 37.500 0.00 0.00 0.00 3.33
2791 2962 7.551262 TCATAGTATAGGACGTTTTTGCATGTT 59.449 33.333 0.00 0.00 0.00 2.71
2792 2963 7.045416 TCATAGTATAGGACGTTTTTGCATGT 58.955 34.615 0.00 0.00 0.00 3.21
2793 2964 7.438160 TCTCATAGTATAGGACGTTTTTGCATG 59.562 37.037 0.00 0.00 0.00 4.06
2794 2965 7.497595 TCTCATAGTATAGGACGTTTTTGCAT 58.502 34.615 0.00 0.00 0.00 3.96
2795 2966 6.869695 TCTCATAGTATAGGACGTTTTTGCA 58.130 36.000 0.00 0.00 0.00 4.08
2796 2967 7.948278 ATCTCATAGTATAGGACGTTTTTGC 57.052 36.000 0.00 0.00 0.00 3.68
2800 2971 9.179909 CCATCTATCTCATAGTATAGGACGTTT 57.820 37.037 0.00 0.00 34.47 3.60
2801 2972 8.549731 TCCATCTATCTCATAGTATAGGACGTT 58.450 37.037 0.00 0.00 34.47 3.99
2802 2973 8.091952 TCCATCTATCTCATAGTATAGGACGT 57.908 38.462 0.00 0.00 34.47 4.34
2803 2974 8.208224 ACTCCATCTATCTCATAGTATAGGACG 58.792 40.741 0.00 0.00 34.47 4.79
2811 2982 8.841757 ACATACCTACTCCATCTATCTCATAGT 58.158 37.037 0.00 0.00 34.47 2.12
2812 2983 9.693739 AACATACCTACTCCATCTATCTCATAG 57.306 37.037 0.00 0.00 0.00 2.23
2814 2985 8.964533 AAACATACCTACTCCATCTATCTCAT 57.035 34.615 0.00 0.00 0.00 2.90
2815 2986 8.783660 AAAACATACCTACTCCATCTATCTCA 57.216 34.615 0.00 0.00 0.00 3.27
2816 2987 9.084533 AGAAAACATACCTACTCCATCTATCTC 57.915 37.037 0.00 0.00 0.00 2.75
2817 2988 9.084533 GAGAAAACATACCTACTCCATCTATCT 57.915 37.037 0.00 0.00 0.00 1.98
2818 2989 9.084533 AGAGAAAACATACCTACTCCATCTATC 57.915 37.037 0.00 0.00 0.00 2.08
2830 3001 8.903820 GTGGCAATTTATAGAGAAAACATACCT 58.096 33.333 0.00 0.00 0.00 3.08
2831 3002 8.682710 TGTGGCAATTTATAGAGAAAACATACC 58.317 33.333 0.00 0.00 0.00 2.73
2835 3006 8.902806 CCTATGTGGCAATTTATAGAGAAAACA 58.097 33.333 0.00 0.00 0.00 2.83
2836 3007 8.903820 ACCTATGTGGCAATTTATAGAGAAAAC 58.096 33.333 0.00 0.00 40.22 2.43
2837 3008 9.474313 AACCTATGTGGCAATTTATAGAGAAAA 57.526 29.630 0.00 0.00 40.22 2.29
2838 3009 9.474313 AAACCTATGTGGCAATTTATAGAGAAA 57.526 29.630 0.00 0.00 40.22 2.52
2839 3010 9.474313 AAAACCTATGTGGCAATTTATAGAGAA 57.526 29.630 0.00 0.00 40.22 2.87
2846 3017 9.647918 TCCATATAAAACCTATGTGGCAATTTA 57.352 29.630 0.00 0.00 40.22 1.40
2847 3018 8.546083 TCCATATAAAACCTATGTGGCAATTT 57.454 30.769 0.00 0.00 40.22 1.82
2848 3019 8.725606 ATCCATATAAAACCTATGTGGCAATT 57.274 30.769 0.00 0.00 40.22 2.32
2849 3020 7.397192 GGATCCATATAAAACCTATGTGGCAAT 59.603 37.037 6.95 0.00 40.22 3.56
2850 3021 6.719370 GGATCCATATAAAACCTATGTGGCAA 59.281 38.462 6.95 0.00 40.22 4.52
2851 3022 6.183361 TGGATCCATATAAAACCTATGTGGCA 60.183 38.462 11.44 0.00 40.22 4.92
2852 3023 6.245408 TGGATCCATATAAAACCTATGTGGC 58.755 40.000 11.44 0.00 40.22 5.01
2853 3024 7.890127 ACATGGATCCATATAAAACCTATGTGG 59.110 37.037 26.87 10.95 37.49 4.17
2854 3025 8.733458 CACATGGATCCATATAAAACCTATGTG 58.267 37.037 26.87 21.39 34.91 3.21
2855 3026 8.668653 TCACATGGATCCATATAAAACCTATGT 58.331 33.333 26.87 14.45 34.91 2.29
2856 3027 9.519191 TTCACATGGATCCATATAAAACCTATG 57.481 33.333 26.87 13.79 34.91 2.23
2857 3028 9.745018 CTTCACATGGATCCATATAAAACCTAT 57.255 33.333 26.87 0.00 34.91 2.57
2858 3029 8.944138 TCTTCACATGGATCCATATAAAACCTA 58.056 33.333 26.87 4.98 34.91 3.08
2859 3030 7.815383 TCTTCACATGGATCCATATAAAACCT 58.185 34.615 26.87 0.00 34.91 3.50
2860 3031 8.463930 TTCTTCACATGGATCCATATAAAACC 57.536 34.615 26.87 0.00 34.91 3.27
2864 3035 9.865152 TGATTTTCTTCACATGGATCCATATAA 57.135 29.630 26.87 18.32 34.91 0.98
2866 3037 8.951614 ATGATTTTCTTCACATGGATCCATAT 57.048 30.769 26.87 14.18 34.91 1.78
2867 3038 8.771521 AATGATTTTCTTCACATGGATCCATA 57.228 30.769 26.87 9.35 34.91 2.74
2868 3039 7.563924 AGAATGATTTTCTTCACATGGATCCAT 59.436 33.333 22.15 22.15 37.08 3.41
2869 3040 6.893554 AGAATGATTTTCTTCACATGGATCCA 59.106 34.615 18.88 18.88 0.00 3.41
2870 3041 7.344095 AGAATGATTTTCTTCACATGGATCC 57.656 36.000 4.20 4.20 0.00 3.36
2871 3042 7.067859 TGGAGAATGATTTTCTTCACATGGATC 59.932 37.037 0.00 0.00 29.47 3.36
2872 3043 6.893554 TGGAGAATGATTTTCTTCACATGGAT 59.106 34.615 0.00 0.00 29.47 3.41
2873 3044 6.247676 TGGAGAATGATTTTCTTCACATGGA 58.752 36.000 0.00 0.00 29.47 3.41
2874 3045 6.519679 TGGAGAATGATTTTCTTCACATGG 57.480 37.500 0.00 0.00 29.47 3.66
2875 3046 7.010183 GCATTGGAGAATGATTTTCTTCACATG 59.990 37.037 0.00 0.00 41.49 3.21
2876 3047 7.039882 GCATTGGAGAATGATTTTCTTCACAT 58.960 34.615 0.00 0.00 41.49 3.21
2877 3048 6.015265 TGCATTGGAGAATGATTTTCTTCACA 60.015 34.615 0.00 0.00 41.49 3.58
2878 3049 6.392354 TGCATTGGAGAATGATTTTCTTCAC 58.608 36.000 0.00 0.00 41.49 3.18
2879 3050 6.593268 TGCATTGGAGAATGATTTTCTTCA 57.407 33.333 0.00 0.00 41.49 3.02
2880 3051 7.385752 TGTTTGCATTGGAGAATGATTTTCTTC 59.614 33.333 0.00 0.00 41.49 2.87
2881 3052 7.172019 GTGTTTGCATTGGAGAATGATTTTCTT 59.828 33.333 0.00 0.00 41.49 2.52
2882 3053 6.647895 GTGTTTGCATTGGAGAATGATTTTCT 59.352 34.615 0.00 0.00 41.49 2.52
2883 3054 6.400303 CGTGTTTGCATTGGAGAATGATTTTC 60.400 38.462 0.00 0.00 41.49 2.29
2884 3055 5.406175 CGTGTTTGCATTGGAGAATGATTTT 59.594 36.000 0.00 0.00 41.49 1.82
2885 3056 4.925054 CGTGTTTGCATTGGAGAATGATTT 59.075 37.500 0.00 0.00 41.49 2.17
2886 3057 4.218200 TCGTGTTTGCATTGGAGAATGATT 59.782 37.500 0.00 0.00 41.49 2.57
2887 3058 3.758023 TCGTGTTTGCATTGGAGAATGAT 59.242 39.130 0.00 0.00 41.49 2.45
2888 3059 3.145286 TCGTGTTTGCATTGGAGAATGA 58.855 40.909 0.00 0.00 41.49 2.57
2889 3060 3.557577 TCGTGTTTGCATTGGAGAATG 57.442 42.857 0.00 0.00 41.82 2.67
2890 3061 4.012374 AGATCGTGTTTGCATTGGAGAAT 58.988 39.130 0.00 0.00 0.00 2.40
2891 3062 3.411446 AGATCGTGTTTGCATTGGAGAA 58.589 40.909 0.00 0.00 0.00 2.87
2892 3063 3.057969 AGATCGTGTTTGCATTGGAGA 57.942 42.857 0.00 0.00 0.00 3.71
2893 3064 3.495193 CAAGATCGTGTTTGCATTGGAG 58.505 45.455 0.00 0.00 0.00 3.86
2894 3065 2.228582 CCAAGATCGTGTTTGCATTGGA 59.771 45.455 7.88 0.00 38.35 3.53
2895 3066 2.228582 TCCAAGATCGTGTTTGCATTGG 59.771 45.455 7.88 3.96 37.62 3.16
2896 3067 3.557577 TCCAAGATCGTGTTTGCATTG 57.442 42.857 7.88 0.00 0.00 2.82
2897 3068 3.612479 GCTTCCAAGATCGTGTTTGCATT 60.612 43.478 7.88 0.00 0.00 3.56
2898 3069 2.095059 GCTTCCAAGATCGTGTTTGCAT 60.095 45.455 7.88 0.00 0.00 3.96
2899 3070 1.266718 GCTTCCAAGATCGTGTTTGCA 59.733 47.619 7.88 0.00 0.00 4.08
2900 3071 1.401539 GGCTTCCAAGATCGTGTTTGC 60.402 52.381 7.88 7.88 0.00 3.68
2901 3072 1.200020 GGGCTTCCAAGATCGTGTTTG 59.800 52.381 7.88 0.00 0.00 2.93
2902 3073 1.202879 TGGGCTTCCAAGATCGTGTTT 60.203 47.619 7.88 0.00 37.67 2.83
2903 3074 0.400213 TGGGCTTCCAAGATCGTGTT 59.600 50.000 7.88 0.00 37.67 3.32
2904 3075 0.321653 GTGGGCTTCCAAGATCGTGT 60.322 55.000 7.88 0.00 43.12 4.49
2905 3076 0.036010 AGTGGGCTTCCAAGATCGTG 60.036 55.000 1.13 1.13 43.12 4.35
2906 3077 1.568504 TAGTGGGCTTCCAAGATCGT 58.431 50.000 0.00 0.00 43.12 3.73
2907 3078 2.487934 CATAGTGGGCTTCCAAGATCG 58.512 52.381 0.00 0.00 43.12 3.69
2908 3079 2.856222 CCATAGTGGGCTTCCAAGATC 58.144 52.381 0.00 0.00 43.12 2.75
2920 3091 3.202906 CCACGTATTTGTCCCATAGTGG 58.797 50.000 0.00 0.00 41.29 4.00
2921 3092 3.869065 ACCACGTATTTGTCCCATAGTG 58.131 45.455 0.00 0.00 0.00 2.74
2922 3093 5.046448 TGTTACCACGTATTTGTCCCATAGT 60.046 40.000 0.00 0.00 0.00 2.12
2923 3094 5.421277 TGTTACCACGTATTTGTCCCATAG 58.579 41.667 0.00 0.00 0.00 2.23
2924 3095 5.417754 TGTTACCACGTATTTGTCCCATA 57.582 39.130 0.00 0.00 0.00 2.74
2925 3096 4.289238 TGTTACCACGTATTTGTCCCAT 57.711 40.909 0.00 0.00 0.00 4.00
2926 3097 3.766068 TGTTACCACGTATTTGTCCCA 57.234 42.857 0.00 0.00 0.00 4.37
2927 3098 4.067192 AGTTGTTACCACGTATTTGTCCC 58.933 43.478 0.00 0.00 0.00 4.46
2928 3099 4.751098 TGAGTTGTTACCACGTATTTGTCC 59.249 41.667 0.00 0.00 0.00 4.02
2929 3100 5.610982 CGTGAGTTGTTACCACGTATTTGTC 60.611 44.000 0.00 0.00 40.69 3.18
2930 3101 4.209703 CGTGAGTTGTTACCACGTATTTGT 59.790 41.667 0.00 0.00 40.69 2.83
2931 3102 4.376615 CCGTGAGTTGTTACCACGTATTTG 60.377 45.833 12.15 0.00 42.34 2.32
2932 3103 3.742369 CCGTGAGTTGTTACCACGTATTT 59.258 43.478 12.15 0.00 42.34 1.40
2933 3104 3.005684 TCCGTGAGTTGTTACCACGTATT 59.994 43.478 12.15 0.00 42.34 1.89
2934 3105 2.557924 TCCGTGAGTTGTTACCACGTAT 59.442 45.455 12.15 0.00 42.34 3.06
2935 3106 1.952990 TCCGTGAGTTGTTACCACGTA 59.047 47.619 12.15 0.00 42.34 3.57
2936 3107 0.746063 TCCGTGAGTTGTTACCACGT 59.254 50.000 12.15 0.00 42.34 4.49
2937 3108 1.855513 TTCCGTGAGTTGTTACCACG 58.144 50.000 0.00 0.00 42.93 4.94
2938 3109 2.095919 GCATTCCGTGAGTTGTTACCAC 60.096 50.000 0.00 0.00 0.00 4.16
2939 3110 2.147958 GCATTCCGTGAGTTGTTACCA 58.852 47.619 0.00 0.00 0.00 3.25
2940 3111 2.423577 AGCATTCCGTGAGTTGTTACC 58.576 47.619 0.00 0.00 0.00 2.85
2941 3112 3.370061 GGTAGCATTCCGTGAGTTGTTAC 59.630 47.826 0.00 0.00 0.00 2.50
2942 3113 3.592059 GGTAGCATTCCGTGAGTTGTTA 58.408 45.455 0.00 0.00 0.00 2.41
2943 3114 2.423577 GGTAGCATTCCGTGAGTTGTT 58.576 47.619 0.00 0.00 0.00 2.83
2944 3115 1.338769 GGGTAGCATTCCGTGAGTTGT 60.339 52.381 0.00 0.00 0.00 3.32
2945 3116 1.369625 GGGTAGCATTCCGTGAGTTG 58.630 55.000 0.00 0.00 0.00 3.16
2946 3117 0.252197 GGGGTAGCATTCCGTGAGTT 59.748 55.000 0.00 0.00 0.00 3.01
2947 3118 1.905512 GGGGTAGCATTCCGTGAGT 59.094 57.895 0.00 0.00 0.00 3.41
2948 3119 1.227263 CGGGGTAGCATTCCGTGAG 60.227 63.158 0.00 0.00 39.04 3.51
2949 3120 2.897207 CGGGGTAGCATTCCGTGA 59.103 61.111 0.00 0.00 39.04 4.35
2950 3121 2.895372 GCGGGGTAGCATTCCGTG 60.895 66.667 9.36 0.00 44.97 4.94
2951 3122 3.395702 TGCGGGGTAGCATTCCGT 61.396 61.111 9.36 0.00 44.97 4.69
2957 3128 2.808598 TTTTTGTTGCGGGGTAGCA 58.191 47.368 0.00 0.00 46.54 3.49
2973 3144 4.309099 ACATGCAGCATTTCGTGATTTTT 58.691 34.783 4.69 0.00 0.00 1.94
2974 3145 3.916761 ACATGCAGCATTTCGTGATTTT 58.083 36.364 4.69 0.00 0.00 1.82
2975 3146 3.581024 ACATGCAGCATTTCGTGATTT 57.419 38.095 4.69 0.00 0.00 2.17
2976 3147 3.581024 AACATGCAGCATTTCGTGATT 57.419 38.095 4.69 0.00 0.00 2.57
2977 3148 3.057386 TCAAACATGCAGCATTTCGTGAT 60.057 39.130 4.69 0.00 0.00 3.06
2978 3149 2.292845 TCAAACATGCAGCATTTCGTGA 59.707 40.909 4.69 4.56 0.00 4.35
2979 3150 2.659757 CTCAAACATGCAGCATTTCGTG 59.340 45.455 4.69 2.10 0.00 4.35
2980 3151 2.352030 CCTCAAACATGCAGCATTTCGT 60.352 45.455 4.69 0.00 0.00 3.85
2981 3152 2.256174 CCTCAAACATGCAGCATTTCG 58.744 47.619 4.69 0.00 0.00 3.46
2982 3153 1.997606 GCCTCAAACATGCAGCATTTC 59.002 47.619 4.69 0.00 0.00 2.17
2983 3154 1.345089 TGCCTCAAACATGCAGCATTT 59.655 42.857 4.69 0.00 0.00 2.32
2984 3155 0.970640 TGCCTCAAACATGCAGCATT 59.029 45.000 4.69 0.00 0.00 3.56
2985 3156 0.245539 GTGCCTCAAACATGCAGCAT 59.754 50.000 0.52 0.52 35.33 3.79
2986 3157 1.108132 TGTGCCTCAAACATGCAGCA 61.108 50.000 0.00 0.00 35.33 4.41
2987 3158 0.665369 GTGTGCCTCAAACATGCAGC 60.665 55.000 0.00 0.00 35.33 5.25
2988 3159 0.386352 CGTGTGCCTCAAACATGCAG 60.386 55.000 0.00 0.00 35.33 4.41
2989 3160 0.817229 TCGTGTGCCTCAAACATGCA 60.817 50.000 0.00 0.00 35.04 3.96
2990 3161 0.310543 TTCGTGTGCCTCAAACATGC 59.689 50.000 0.00 0.00 35.04 4.06
2991 3162 1.660052 CGTTCGTGTGCCTCAAACATG 60.660 52.381 0.00 0.00 36.15 3.21
2992 3163 0.586319 CGTTCGTGTGCCTCAAACAT 59.414 50.000 0.00 0.00 0.00 2.71
2993 3164 0.741574 ACGTTCGTGTGCCTCAAACA 60.742 50.000 0.00 0.00 0.00 2.83
2994 3165 0.315869 CACGTTCGTGTGCCTCAAAC 60.316 55.000 15.81 0.00 32.31 2.93
2995 3166 0.460459 TCACGTTCGTGTGCCTCAAA 60.460 50.000 21.61 0.91 39.73 2.69
2996 3167 0.460459 TTCACGTTCGTGTGCCTCAA 60.460 50.000 21.61 7.76 39.73 3.02
2997 3168 0.874175 CTTCACGTTCGTGTGCCTCA 60.874 55.000 21.61 2.23 39.73 3.86
2998 3169 1.557443 CCTTCACGTTCGTGTGCCTC 61.557 60.000 21.61 0.00 39.73 4.70
2999 3170 1.594293 CCTTCACGTTCGTGTGCCT 60.594 57.895 21.61 0.00 39.73 4.75
3000 3171 2.604174 CCCTTCACGTTCGTGTGCC 61.604 63.158 21.61 0.00 39.73 5.01
3001 3172 2.935955 CCCTTCACGTTCGTGTGC 59.064 61.111 21.61 0.00 39.73 4.57
3002 3173 1.433053 TTGCCCTTCACGTTCGTGTG 61.433 55.000 21.61 15.91 41.28 3.82
3003 3174 1.153329 TTGCCCTTCACGTTCGTGT 60.153 52.632 21.61 0.00 37.40 4.49
3004 3175 1.278637 GTTGCCCTTCACGTTCGTG 59.721 57.895 17.57 17.57 37.47 4.35
3005 3176 0.534203 ATGTTGCCCTTCACGTTCGT 60.534 50.000 0.00 0.00 0.00 3.85
3006 3177 0.165944 GATGTTGCCCTTCACGTTCG 59.834 55.000 0.00 0.00 0.00 3.95
3007 3178 0.521735 GGATGTTGCCCTTCACGTTC 59.478 55.000 0.00 0.00 0.00 3.95
3008 3179 0.179004 TGGATGTTGCCCTTCACGTT 60.179 50.000 0.00 0.00 0.00 3.99
3009 3180 0.889186 GTGGATGTTGCCCTTCACGT 60.889 55.000 0.00 0.00 0.00 4.49
3010 3181 1.875963 GTGGATGTTGCCCTTCACG 59.124 57.895 0.00 0.00 0.00 4.35
3011 3182 1.875963 CGTGGATGTTGCCCTTCAC 59.124 57.895 0.00 0.00 0.00 3.18
3012 3183 1.971167 GCGTGGATGTTGCCCTTCA 60.971 57.895 0.00 0.00 0.00 3.02
3013 3184 1.244019 AAGCGTGGATGTTGCCCTTC 61.244 55.000 0.00 0.00 0.00 3.46
3014 3185 1.228552 AAGCGTGGATGTTGCCCTT 60.229 52.632 0.00 0.00 0.00 3.95
3015 3186 1.973281 CAAGCGTGGATGTTGCCCT 60.973 57.895 0.00 0.00 0.00 5.19
3016 3187 1.315257 ATCAAGCGTGGATGTTGCCC 61.315 55.000 0.00 0.00 0.00 5.36
3017 3188 1.331756 CTATCAAGCGTGGATGTTGCC 59.668 52.381 0.00 0.00 0.00 4.52
3018 3189 2.279741 TCTATCAAGCGTGGATGTTGC 58.720 47.619 0.00 0.00 0.00 4.17
3019 3190 5.490139 AATTCTATCAAGCGTGGATGTTG 57.510 39.130 0.00 0.00 0.00 3.33
3020 3191 6.597672 TGTTAATTCTATCAAGCGTGGATGTT 59.402 34.615 0.00 0.00 0.00 2.71
3021 3192 6.112734 TGTTAATTCTATCAAGCGTGGATGT 58.887 36.000 0.00 0.00 0.00 3.06
3022 3193 6.603237 TGTTAATTCTATCAAGCGTGGATG 57.397 37.500 0.00 0.00 0.00 3.51
3023 3194 7.807977 ATTGTTAATTCTATCAAGCGTGGAT 57.192 32.000 0.00 0.00 0.00 3.41
3024 3195 7.624360 AATTGTTAATTCTATCAAGCGTGGA 57.376 32.000 0.00 0.00 0.00 4.02
3025 3196 8.586273 CAAAATTGTTAATTCTATCAAGCGTGG 58.414 33.333 0.00 0.00 0.00 4.94
3026 3197 9.340695 TCAAAATTGTTAATTCTATCAAGCGTG 57.659 29.630 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.