Multiple sequence alignment - TraesCS2D01G118400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G118400 chr2D 100.000 6833 0 0 884 7716 67562036 67555204 0.000000e+00 12619
1 TraesCS2D01G118400 chr2D 100.000 523 0 0 1 523 67562919 67562397 0.000000e+00 966
2 TraesCS2D01G118400 chr2D 90.741 162 13 1 1628 1789 122864267 122864108 1.690000e-51 215
3 TraesCS2D01G118400 chr2A 96.563 2502 74 9 4571 7065 66802947 66805443 0.000000e+00 4133
4 TraesCS2D01G118400 chr2A 92.830 2078 83 26 1547 3592 66799761 66801804 0.000000e+00 2952
5 TraesCS2D01G118400 chr2A 97.514 885 21 1 3689 4572 66801806 66802690 0.000000e+00 1511
6 TraesCS2D01G118400 chr2A 92.243 709 34 8 884 1583 66799064 66799760 0.000000e+00 985
7 TraesCS2D01G118400 chr2A 90.244 287 7 4 247 518 66798705 66798985 9.520000e-94 355
8 TraesCS2D01G118400 chr2A 87.697 317 21 7 7401 7716 66806483 66806782 3.430000e-93 353
9 TraesCS2D01G118400 chr2A 84.774 243 33 3 2917 3157 211692592 211692832 2.780000e-59 241
10 TraesCS2D01G118400 chr2A 82.996 247 33 6 2920 3160 751532799 751532556 1.690000e-51 215
11 TraesCS2D01G118400 chr2A 89.506 162 15 1 1628 1789 127198323 127198164 3.650000e-48 204
12 TraesCS2D01G118400 chr2A 87.425 167 15 4 1 166 66796880 66797041 3.680000e-43 187
13 TraesCS2D01G118400 chr2B 95.584 2355 97 6 4571 6918 102975497 102977851 0.000000e+00 3766
14 TraesCS2D01G118400 chr2B 94.381 1833 60 15 1785 3592 102972544 102974358 0.000000e+00 2774
15 TraesCS2D01G118400 chr2B 97.514 885 21 1 3689 4572 102974360 102975244 0.000000e+00 1511
16 TraesCS2D01G118400 chr2B 87.681 690 52 8 944 1633 102971889 102972545 0.000000e+00 773
17 TraesCS2D01G118400 chr2B 87.584 298 13 9 240 523 102971150 102971437 2.690000e-84 324
18 TraesCS2D01G118400 chr2B 87.814 279 12 7 7442 7716 102980074 102980334 2.700000e-79 307
19 TraesCS2D01G118400 chr2B 96.330 109 2 1 3584 3690 669438696 669438804 2.210000e-40 178
20 TraesCS2D01G118400 chr1D 88.000 200 22 2 2959 3157 100462041 100461843 1.290000e-57 235
21 TraesCS2D01G118400 chr1D 87.019 208 25 2 2959 3164 348664955 348665162 4.660000e-57 233
22 TraesCS2D01G118400 chr1D 92.405 158 7 3 1632 1786 108261697 108261542 3.620000e-53 220
23 TraesCS2D01G118400 chr1D 90.968 155 11 2 1632 1786 7349855 7349704 1.010000e-48 206
24 TraesCS2D01G118400 chr5A 87.500 200 23 2 2959 3157 535518700 535518502 6.020000e-56 230
25 TraesCS2D01G118400 chr5A 89.937 159 14 1 1632 1790 246820215 246820059 3.650000e-48 204
26 TraesCS2D01G118400 chr3A 86.829 205 22 5 2957 3157 19044900 19045103 2.800000e-54 224
27 TraesCS2D01G118400 chr3A 92.437 119 6 3 3593 3708 75959480 75959598 4.790000e-37 167
28 TraesCS2D01G118400 chr3B 84.120 233 31 5 2925 3157 663553465 663553239 3.620000e-53 220
29 TraesCS2D01G118400 chr7D 90.385 156 13 1 1632 1787 593035163 593035316 3.650000e-48 204
30 TraesCS2D01G118400 chr5D 89.937 159 14 1 1630 1788 285256711 285256867 3.650000e-48 204
31 TraesCS2D01G118400 chr5D 93.496 123 1 6 3582 3703 266749460 266749344 7.960000e-40 176
32 TraesCS2D01G118400 chr5D 96.262 107 4 0 3593 3699 565043188 565043082 7.960000e-40 176
33 TraesCS2D01G118400 chr5B 90.000 160 12 3 1627 1786 208523296 208523451 3.650000e-48 204
34 TraesCS2D01G118400 chr3D 99.010 101 1 0 3593 3693 79532553 79532653 1.710000e-41 182
35 TraesCS2D01G118400 chr3D 98.990 99 1 0 3593 3691 613073356 613073454 2.210000e-40 178
36 TraesCS2D01G118400 chr6B 98.020 101 2 0 3590 3690 315650307 315650207 7.960000e-40 176
37 TraesCS2D01G118400 chr1B 98.039 102 1 1 3590 3690 132296905 132296804 7.960000e-40 176
38 TraesCS2D01G118400 chr6A 93.043 115 6 2 3593 3706 325903601 325903488 4.790000e-37 167
39 TraesCS2D01G118400 chrUn 78.516 256 39 12 2914 3157 289372046 289372297 3.730000e-33 154
40 TraesCS2D01G118400 chrUn 78.516 256 39 12 2914 3157 334497012 334497263 3.730000e-33 154
41 TraesCS2D01G118400 chr7A 77.821 257 40 14 2914 3157 163070322 163070574 8.070000e-30 143


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G118400 chr2D 67555204 67562919 7715 True 6792.500000 12619 100.000000 1 7716 2 chr2D.!!$R2 7715
1 TraesCS2D01G118400 chr2A 66796880 66806782 9902 False 1496.571429 4133 92.073714 1 7716 7 chr2A.!!$F2 7715
2 TraesCS2D01G118400 chr2B 102971150 102980334 9184 False 1575.833333 3766 91.759667 240 7716 6 chr2B.!!$F2 7476

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
54 55 0.041312 GAGAACGTTTGTGCGCATGT 60.041 50.000 15.91 4.76 34.88 3.21 F
83 84 0.456995 CCACGGCGTTCTCTTCTCTC 60.457 60.000 11.19 0.00 0.00 3.20 F
1327 3246 0.107410 TGGGTTCATCCGTACCATGC 60.107 55.000 0.00 0.00 34.34 4.06 F
1622 3582 1.194997 CAATTGCATTGGCCGTTTGTG 59.805 47.619 0.00 0.00 40.13 3.33 F
3182 5185 0.321653 GAGCAACCCGTTCCTGTGAT 60.322 55.000 0.00 0.00 0.00 3.06 F
3609 5612 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28 F
3610 5613 1.203212 TCTACTCCCTCCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44 F
4259 6264 1.250328 TTGGCTCTTGAGCATTGGTG 58.750 50.000 21.97 0.00 36.33 4.17 F
5738 8010 1.738099 CCTGCCTTGTCGTTCCTCG 60.738 63.158 0.00 0.00 41.41 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1109 3023 2.710902 GGCCGCCTTCCAAATCACC 61.711 63.158 0.71 0.0 0.00 4.02 R
1812 3784 3.080300 TGACCACAAGAAACTGGTTGT 57.920 42.857 0.00 0.0 41.09 3.32 R
3163 5166 0.321653 ATCACAGGAACGGGTTGCTC 60.322 55.000 2.37 0.0 39.28 4.26 R
3592 5595 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.0 0.00 2.59 R
4769 7034 1.481871 ATTCTCAGGCATGCTTTGGG 58.518 50.000 18.92 16.1 0.00 4.12 R
5359 7626 2.212652 GCCACATCAATGAGATACGCA 58.787 47.619 0.00 0.0 34.43 5.24 R
5721 7993 0.242825 TACGAGGAACGACAAGGCAG 59.757 55.000 0.00 0.0 45.77 4.85 R
5751 8023 0.583438 CAGATACGCGCCCTCAATTG 59.417 55.000 5.73 0.0 0.00 2.32 R
7604 11878 0.103390 GTTCGGGTTTGGTTGGTTGG 59.897 55.000 0.00 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.240203 CGTGGCGCTCTCGAAAAA 58.760 55.556 7.64 0.00 38.10 1.94
19 20 1.154654 CGTGGCGCTCTCGAAAAAC 60.155 57.895 7.64 0.00 38.10 2.43
20 21 1.827315 CGTGGCGCTCTCGAAAAACA 61.827 55.000 7.64 0.00 38.10 2.83
21 22 0.306533 GTGGCGCTCTCGAAAAACAA 59.693 50.000 7.64 0.00 38.10 2.83
22 23 1.018148 TGGCGCTCTCGAAAAACAAA 58.982 45.000 7.64 0.00 38.10 2.83
38 39 0.934496 CAAACAAACTCCGCGTGAGA 59.066 50.000 25.01 7.41 44.42 3.27
39 40 1.329292 CAAACAAACTCCGCGTGAGAA 59.671 47.619 25.01 0.00 44.42 2.87
40 41 0.935196 AACAAACTCCGCGTGAGAAC 59.065 50.000 25.01 0.00 44.42 3.01
41 42 1.213094 ACAAACTCCGCGTGAGAACG 61.213 55.000 25.01 16.03 44.42 3.95
53 54 0.041400 TGAGAACGTTTGTGCGCATG 60.041 50.000 15.91 4.05 27.10 4.06
54 55 0.041312 GAGAACGTTTGTGCGCATGT 60.041 50.000 15.91 4.76 34.88 3.21
83 84 0.456995 CCACGGCGTTCTCTTCTCTC 60.457 60.000 11.19 0.00 0.00 3.20
102 103 1.153127 ACAAGAAACCGAACGGCCA 60.153 52.632 13.32 0.00 39.32 5.36
103 104 0.536460 ACAAGAAACCGAACGGCCAT 60.536 50.000 13.32 0.00 39.32 4.40
123 124 5.107220 GCCATTCTTGTTTCAGAAATTGCAG 60.107 40.000 0.00 0.00 36.36 4.41
156 157 3.661758 TTTCCGTCGAGAAAAACACAC 57.338 42.857 0.00 0.00 32.90 3.82
173 174 3.700961 CGAGTAAATCGCCCACGG 58.299 61.111 0.00 0.00 45.98 4.94
174 175 1.140161 CGAGTAAATCGCCCACGGA 59.860 57.895 0.00 0.00 45.98 4.69
177 178 2.544277 CGAGTAAATCGCCCACGGAATA 60.544 50.000 0.00 0.00 45.98 1.75
179 180 4.062991 GAGTAAATCGCCCACGGAATAAT 58.937 43.478 0.00 0.00 40.63 1.28
180 181 5.217978 AGTAAATCGCCCACGGAATAATA 57.782 39.130 0.00 0.00 40.63 0.98
181 182 5.613329 AGTAAATCGCCCACGGAATAATAA 58.387 37.500 0.00 0.00 40.63 1.40
182 183 4.823790 AAATCGCCCACGGAATAATAAC 57.176 40.909 0.00 0.00 40.63 1.89
184 185 2.828877 TCGCCCACGGAATAATAACAG 58.171 47.619 0.00 0.00 40.63 3.16
186 187 2.227194 GCCCACGGAATAATAACAGGG 58.773 52.381 0.00 0.00 38.10 4.45
187 188 2.158726 GCCCACGGAATAATAACAGGGA 60.159 50.000 0.00 0.00 37.22 4.20
188 189 3.473625 CCCACGGAATAATAACAGGGAC 58.526 50.000 0.00 0.00 37.22 4.46
189 190 3.473625 CCACGGAATAATAACAGGGACC 58.526 50.000 0.00 0.00 0.00 4.46
190 191 3.128349 CACGGAATAATAACAGGGACCG 58.872 50.000 0.00 0.00 43.79 4.79
191 192 2.140717 CGGAATAATAACAGGGACCGC 58.859 52.381 0.00 0.00 33.24 5.68
192 193 2.484065 CGGAATAATAACAGGGACCGCA 60.484 50.000 0.00 0.00 33.24 5.69
193 194 3.751518 GGAATAATAACAGGGACCGCAT 58.248 45.455 0.00 0.00 0.00 4.73
209 999 1.941072 CATCACACCACACCACACG 59.059 57.895 0.00 0.00 0.00 4.49
259 1843 1.427809 CAGCAGTAGATCCCATCCCA 58.572 55.000 0.00 0.00 0.00 4.37
273 1857 0.636647 ATCCCAATCCCTTTCCACCC 59.363 55.000 0.00 0.00 0.00 4.61
435 2034 3.965539 GACGTGAGCAGGCAGGCAT 62.966 63.158 0.00 0.00 35.83 4.40
436 2035 3.200593 CGTGAGCAGGCAGGCATC 61.201 66.667 0.00 0.00 35.83 3.91
437 2036 2.045634 GTGAGCAGGCAGGCATCA 60.046 61.111 0.00 0.00 35.83 3.07
438 2037 2.113433 GTGAGCAGGCAGGCATCAG 61.113 63.158 0.00 0.00 35.83 2.90
439 2038 2.516460 GAGCAGGCAGGCATCAGG 60.516 66.667 0.00 0.00 35.83 3.86
440 2039 4.816984 AGCAGGCAGGCATCAGGC 62.817 66.667 0.00 0.00 43.74 4.85
457 2056 4.093291 CTCAGGCCCAAGCGCTCT 62.093 66.667 12.06 0.00 41.24 4.09
1057 2971 1.755179 AACTACTAACCGCTCCGCTA 58.245 50.000 0.00 0.00 0.00 4.26
1109 3023 3.307059 GGGAGTTCGGATTATGATGAGGG 60.307 52.174 0.00 0.00 0.00 4.30
1128 3042 1.976474 GTGATTTGGAAGGCGGCCA 60.976 57.895 23.09 0.00 0.00 5.36
1327 3246 0.107410 TGGGTTCATCCGTACCATGC 60.107 55.000 0.00 0.00 34.34 4.06
1448 3371 1.445871 GCATGCGCATCCTCATCATA 58.554 50.000 22.51 0.00 38.36 2.15
1449 3372 1.397343 GCATGCGCATCCTCATCATAG 59.603 52.381 22.51 6.27 38.36 2.23
1514 3437 3.630769 CCGTAGAGGTGTAGACTGCATTA 59.369 47.826 0.00 0.00 34.51 1.90
1596 3556 3.703420 ACGTCGCCAGAAATAGACATAC 58.297 45.455 0.00 0.00 33.56 2.39
1622 3582 1.194997 CAATTGCATTGGCCGTTTGTG 59.805 47.619 0.00 0.00 40.13 3.33
1728 3688 6.092259 GTGTGTTTGTTCACTAGTTTCAGTCT 59.908 38.462 0.00 0.00 38.90 3.24
1807 3779 8.418597 AGTAGTTTAGTAGAGACATTCACCAA 57.581 34.615 0.00 0.00 0.00 3.67
1808 3780 8.524487 AGTAGTTTAGTAGAGACATTCACCAAG 58.476 37.037 0.00 0.00 0.00 3.61
1809 3781 7.304497 AGTTTAGTAGAGACATTCACCAAGT 57.696 36.000 0.00 0.00 0.00 3.16
1810 3782 7.379750 AGTTTAGTAGAGACATTCACCAAGTC 58.620 38.462 0.00 0.00 0.00 3.01
1811 3783 6.911250 TTAGTAGAGACATTCACCAAGTCA 57.089 37.500 0.00 0.00 34.80 3.41
1812 3784 5.808366 AGTAGAGACATTCACCAAGTCAA 57.192 39.130 0.00 0.00 34.80 3.18
1813 3785 5.542779 AGTAGAGACATTCACCAAGTCAAC 58.457 41.667 0.00 0.00 34.80 3.18
1814 3786 4.422073 AGAGACATTCACCAAGTCAACA 57.578 40.909 0.00 0.00 34.80 3.33
1815 3787 4.780815 AGAGACATTCACCAAGTCAACAA 58.219 39.130 0.00 0.00 34.80 2.83
1816 3788 4.576463 AGAGACATTCACCAAGTCAACAAC 59.424 41.667 0.00 0.00 34.80 3.32
1817 3789 3.632145 AGACATTCACCAAGTCAACAACC 59.368 43.478 0.00 0.00 34.80 3.77
1818 3790 3.360867 ACATTCACCAAGTCAACAACCA 58.639 40.909 0.00 0.00 0.00 3.67
2151 4123 8.212317 TGTACTAGTTTGTTTTACTGGTTTCC 57.788 34.615 0.00 0.00 38.19 3.13
2245 4217 7.539712 TTAGTAGAGCACACATAAATTCTGC 57.460 36.000 0.00 0.00 0.00 4.26
2254 4226 3.248602 CACATAAATTCTGCTAGGCGGAC 59.751 47.826 0.11 0.00 44.15 4.79
2318 4290 5.351465 AGCATAACTCCAACAGACGTTATTG 59.649 40.000 0.00 0.00 31.78 1.90
2320 4292 6.672357 GCATAACTCCAACAGACGTTATTGTC 60.672 42.308 0.00 0.00 39.21 3.18
2322 4294 4.957296 ACTCCAACAGACGTTATTGTCTT 58.043 39.130 0.00 0.00 46.85 3.01
2426 4401 8.618677 GGAGTAGTTGTTTTGTTTAGCTACTTT 58.381 33.333 0.00 0.00 38.18 2.66
2790 4765 2.805671 TGGACACATACTTTCGCTGTTG 59.194 45.455 0.00 0.00 0.00 3.33
2885 4860 5.765182 CAGGTGGATTAGGAAATGGTATGTC 59.235 44.000 0.00 0.00 0.00 3.06
2959 4934 7.599630 TTTTACTCCGCGTATTAGATTTGTT 57.400 32.000 4.92 0.00 0.00 2.83
2960 4935 6.578020 TTACTCCGCGTATTAGATTTGTTG 57.422 37.500 4.92 0.00 0.00 3.33
2961 4936 4.751060 ACTCCGCGTATTAGATTTGTTGA 58.249 39.130 4.92 0.00 0.00 3.18
2962 4937 5.357257 ACTCCGCGTATTAGATTTGTTGAT 58.643 37.500 4.92 0.00 0.00 2.57
2963 4938 5.462398 ACTCCGCGTATTAGATTTGTTGATC 59.538 40.000 4.92 0.00 0.00 2.92
2964 4939 5.353111 TCCGCGTATTAGATTTGTTGATCA 58.647 37.500 4.92 0.00 0.00 2.92
2966 4941 7.149307 TCCGCGTATTAGATTTGTTGATCATA 58.851 34.615 4.92 0.00 0.00 2.15
2967 4942 7.817478 TCCGCGTATTAGATTTGTTGATCATAT 59.183 33.333 4.92 0.00 0.00 1.78
2968 4943 8.443160 CCGCGTATTAGATTTGTTGATCATATT 58.557 33.333 4.92 0.00 0.00 1.28
2969 4944 9.811655 CGCGTATTAGATTTGTTGATCATATTT 57.188 29.630 0.00 0.00 0.00 1.40
3182 5185 0.321653 GAGCAACCCGTTCCTGTGAT 60.322 55.000 0.00 0.00 0.00 3.06
3261 5264 9.899226 GCATTTCATCTAGTTTTACTTCAAACT 57.101 29.630 4.37 4.37 46.54 2.66
3497 5500 2.952978 TGCGTGGAACTGTAAAATTGGT 59.047 40.909 0.00 0.00 31.75 3.67
3592 5595 7.339212 TCGTCCCATTTTGTGATAATGAAATCT 59.661 33.333 0.00 0.00 35.49 2.40
3593 5596 8.620416 CGTCCCATTTTGTGATAATGAAATCTA 58.380 33.333 0.00 0.00 35.49 1.98
3594 5597 9.736023 GTCCCATTTTGTGATAATGAAATCTAC 57.264 33.333 0.00 0.00 35.49 2.59
3595 5598 9.699410 TCCCATTTTGTGATAATGAAATCTACT 57.301 29.630 0.00 0.00 35.49 2.57
3596 5599 9.956720 CCCATTTTGTGATAATGAAATCTACTC 57.043 33.333 0.00 0.00 35.49 2.59
3597 5600 9.956720 CCATTTTGTGATAATGAAATCTACTCC 57.043 33.333 0.00 0.00 35.49 3.85
3598 5601 9.956720 CATTTTGTGATAATGAAATCTACTCCC 57.043 33.333 0.00 0.00 35.49 4.30
3599 5602 9.927081 ATTTTGTGATAATGAAATCTACTCCCT 57.073 29.630 0.00 0.00 0.00 4.20
3600 5603 8.964476 TTTGTGATAATGAAATCTACTCCCTC 57.036 34.615 0.00 0.00 0.00 4.30
3601 5604 7.067496 TGTGATAATGAAATCTACTCCCTCC 57.933 40.000 0.00 0.00 0.00 4.30
3602 5605 6.159988 GTGATAATGAAATCTACTCCCTCCG 58.840 44.000 0.00 0.00 0.00 4.63
3603 5606 5.839063 TGATAATGAAATCTACTCCCTCCGT 59.161 40.000 0.00 0.00 0.00 4.69
3604 5607 4.674281 AATGAAATCTACTCCCTCCGTC 57.326 45.455 0.00 0.00 0.00 4.79
3605 5608 2.385803 TGAAATCTACTCCCTCCGTCC 58.614 52.381 0.00 0.00 0.00 4.79
3606 5609 1.687660 GAAATCTACTCCCTCCGTCCC 59.312 57.143 0.00 0.00 0.00 4.46
3607 5610 0.635009 AATCTACTCCCTCCGTCCCA 59.365 55.000 0.00 0.00 0.00 4.37
3608 5611 0.635009 ATCTACTCCCTCCGTCCCAA 59.365 55.000 0.00 0.00 0.00 4.12
3609 5612 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28
3610 5613 1.203212 TCTACTCCCTCCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
3611 5614 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
3612 5615 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3613 5616 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3614 5617 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3615 5618 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3616 5619 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3617 5620 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
3618 5621 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
3619 5622 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
3620 5623 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
3621 5624 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
3622 5625 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3623 5626 4.083484 CCGTCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
3624 5627 4.755123 CGTCCCAAAATAAGTGACTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
3625 5628 5.238650 CGTCCCAAAATAAGTGACTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
3626 5629 6.238648 CGTCCCAAAATAAGTGACTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
3627 5630 6.918022 GTCCCAAAATAAGTGACTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
3628 5631 6.605594 TCCCAAAATAAGTGACTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
3629 5632 7.776030 TCCCAAAATAAGTGACTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
3630 5633 7.860872 CCCAAAATAAGTGACTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
3631 5634 8.621286 CCAAAATAAGTGACTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
3634 5637 8.535690 AATAAGTGACTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
3635 5638 5.793030 AGTGACTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
3636 5639 6.163135 AGTGACTCAACTTTGTACTAGCTT 57.837 37.500 0.00 0.00 0.00 3.74
3637 5640 6.583562 AGTGACTCAACTTTGTACTAGCTTT 58.416 36.000 0.00 0.00 0.00 3.51
3638 5641 7.723324 AGTGACTCAACTTTGTACTAGCTTTA 58.277 34.615 0.00 0.00 0.00 1.85
3639 5642 7.868415 AGTGACTCAACTTTGTACTAGCTTTAG 59.132 37.037 0.00 0.00 0.00 1.85
3640 5643 7.652507 GTGACTCAACTTTGTACTAGCTTTAGT 59.347 37.037 0.00 0.00 0.00 2.24
3641 5644 8.853126 TGACTCAACTTTGTACTAGCTTTAGTA 58.147 33.333 0.00 0.00 0.00 1.82
3658 5661 9.828039 AGCTTTAGTACAAAGTTAGTACAAAGT 57.172 29.630 18.27 10.22 43.24 2.66
3662 5665 9.669353 TTAGTACAAAGTTAGTACAAAGTCGAG 57.331 33.333 6.30 0.00 43.24 4.04
3663 5666 7.710896 AGTACAAAGTTAGTACAAAGTCGAGT 58.289 34.615 6.30 0.00 43.24 4.18
3664 5667 7.859875 AGTACAAAGTTAGTACAAAGTCGAGTC 59.140 37.037 0.00 0.00 43.24 3.36
3665 5668 6.567050 ACAAAGTTAGTACAAAGTCGAGTCA 58.433 36.000 0.00 0.00 0.00 3.41
3666 5669 6.474751 ACAAAGTTAGTACAAAGTCGAGTCAC 59.525 38.462 0.00 0.00 0.00 3.67
3667 5670 6.388435 AAGTTAGTACAAAGTCGAGTCACT 57.612 37.500 0.00 0.00 0.00 3.41
3668 5671 6.388435 AGTTAGTACAAAGTCGAGTCACTT 57.612 37.500 0.00 3.11 38.30 3.16
3669 5672 7.502120 AGTTAGTACAAAGTCGAGTCACTTA 57.498 36.000 0.00 0.00 35.45 2.24
3670 5673 8.108551 AGTTAGTACAAAGTCGAGTCACTTAT 57.891 34.615 0.00 4.10 35.45 1.73
3671 5674 8.574737 AGTTAGTACAAAGTCGAGTCACTTATT 58.425 33.333 0.00 2.93 35.45 1.40
3672 5675 9.189723 GTTAGTACAAAGTCGAGTCACTTATTT 57.810 33.333 0.00 1.15 35.45 1.40
3673 5676 9.754382 TTAGTACAAAGTCGAGTCACTTATTTT 57.246 29.630 0.00 0.00 35.45 1.82
3674 5677 8.073355 AGTACAAAGTCGAGTCACTTATTTTG 57.927 34.615 0.00 7.24 35.45 2.44
3675 5678 6.300354 ACAAAGTCGAGTCACTTATTTTGG 57.700 37.500 11.39 0.00 35.45 3.28
3676 5679 5.238650 ACAAAGTCGAGTCACTTATTTTGGG 59.761 40.000 11.39 0.00 35.45 4.12
3677 5680 4.884668 AGTCGAGTCACTTATTTTGGGA 57.115 40.909 0.00 0.00 0.00 4.37
3678 5681 4.566987 AGTCGAGTCACTTATTTTGGGAC 58.433 43.478 0.00 0.00 0.00 4.46
3679 5682 3.367025 GTCGAGTCACTTATTTTGGGACG 59.633 47.826 0.00 0.00 33.84 4.79
3680 5683 2.671396 CGAGTCACTTATTTTGGGACGG 59.329 50.000 0.00 0.00 33.84 4.79
3681 5684 3.615592 CGAGTCACTTATTTTGGGACGGA 60.616 47.826 0.00 0.00 33.84 4.69
3682 5685 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
3683 5686 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3684 5687 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
3685 5688 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3686 5689 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3687 5690 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3692 5695 2.077687 TGGGACGGAGGGAGTATTAC 57.922 55.000 0.00 0.00 0.00 1.89
3806 5809 3.003793 TCGGTTGCATGAATTCGACAAAA 59.996 39.130 0.00 0.00 0.00 2.44
3847 5850 8.296799 TGGAACATTGAAATTTGAAAGAATCG 57.703 30.769 0.00 0.00 0.00 3.34
4010 6013 9.823647 AACCTGTATATCTTGAAAGAGTACATG 57.176 33.333 15.64 15.17 38.38 3.21
4259 6264 1.250328 TTGGCTCTTGAGCATTGGTG 58.750 50.000 21.97 0.00 36.33 4.17
4284 6289 8.470002 TGTCATTGGTCTCTATAATATCATCCG 58.530 37.037 0.00 0.00 0.00 4.18
4544 6549 1.885359 GCTGCATCCATCAGGGTATGG 60.885 57.143 0.00 0.00 46.69 2.74
4591 6856 8.639761 TGACCTATATTTTAAGGCTAGACTGAC 58.360 37.037 0.00 0.00 36.24 3.51
4915 7180 6.541907 TGTAGGCAGCCAATCAATTATATCA 58.458 36.000 15.80 0.00 0.00 2.15
5126 7391 4.943705 AGTTCGACCACTTCAATAATGCAT 59.056 37.500 0.00 0.00 0.00 3.96
5262 7527 9.850628 ATCTTATGTTGACAATTCATTTCTGTG 57.149 29.630 0.00 0.00 0.00 3.66
5276 7541 6.693466 TCATTTCTGTGATGCACATTCAATT 58.307 32.000 0.20 0.00 43.71 2.32
5277 7542 6.588373 TCATTTCTGTGATGCACATTCAATTG 59.412 34.615 0.00 0.00 43.71 2.32
5369 7636 8.626526 TCTAAATTATGTACTGTGCGTATCTCA 58.373 33.333 0.00 0.00 0.00 3.27
5432 7702 5.588240 TGTATAGGCTAAGTGTGATGTTCG 58.412 41.667 0.00 0.00 0.00 3.95
5721 7993 4.462483 TGTGTGGAAAAAGAATATCCTGCC 59.538 41.667 0.00 0.00 34.24 4.85
5738 8010 1.738099 CCTGCCTTGTCGTTCCTCG 60.738 63.158 0.00 0.00 41.41 4.63
5751 8023 2.793933 CGTTCCTCGTATTCTTCGGGTC 60.794 54.545 0.00 0.00 34.52 4.46
5863 8135 0.970640 TGTACGTGTGGCACTATGGT 59.029 50.000 19.83 12.89 31.34 3.55
6082 8354 3.537206 GAAGTCCGTGCCAGTGCCT 62.537 63.158 0.00 0.00 36.33 4.75
6163 8435 3.133901 TGTACCGGTGCATTGTGAGATAT 59.866 43.478 22.40 0.00 0.00 1.63
6178 8450 9.730705 ATTGTGAGATATGGTTATAAGGATGTG 57.269 33.333 0.00 0.00 0.00 3.21
6226 8498 1.153309 CCTGGTGATGAGCATCGCA 60.153 57.895 21.40 9.87 47.00 5.10
6274 8546 0.755686 CCGCCTCTTCTGGAAGCTAT 59.244 55.000 5.55 0.00 38.28 2.97
6634 8906 2.806237 GCCTACTCGTTCCTCCGG 59.194 66.667 0.00 0.00 0.00 5.14
6814 9088 1.003355 TGAACCAGCTAGCTGCCAC 60.003 57.895 34.82 25.79 44.23 5.01
6988 9319 0.871722 GCAAGCACGGTGTGTTATCA 59.128 50.000 10.24 0.00 35.75 2.15
7004 9335 6.073058 TGTGTTATCAGCTTGAGATGAACAAC 60.073 38.462 14.84 14.84 44.14 3.32
7005 9336 5.997129 TGTTATCAGCTTGAGATGAACAACA 59.003 36.000 18.06 18.06 44.14 3.33
7008 9339 4.903054 TCAGCTTGAGATGAACAACAGAT 58.097 39.130 0.00 0.00 37.53 2.90
7009 9340 4.694037 TCAGCTTGAGATGAACAACAGATG 59.306 41.667 0.00 0.00 37.53 2.90
7026 9357 6.670695 ACAGATGGTATGCAGTATACATCA 57.329 37.500 10.48 2.66 42.85 3.07
7027 9358 6.459066 ACAGATGGTATGCAGTATACATCAC 58.541 40.000 10.48 0.00 42.85 3.06
7028 9359 5.871524 CAGATGGTATGCAGTATACATCACC 59.128 44.000 10.48 5.58 42.85 4.02
7029 9360 5.543790 AGATGGTATGCAGTATACATCACCA 59.456 40.000 10.48 10.68 42.85 4.17
7030 9361 5.823861 TGGTATGCAGTATACATCACCAT 57.176 39.130 10.48 2.94 42.85 3.55
7031 9362 5.550290 TGGTATGCAGTATACATCACCATG 58.450 41.667 10.48 0.00 42.85 3.66
7032 9363 5.071653 TGGTATGCAGTATACATCACCATGT 59.928 40.000 10.48 0.00 45.73 3.21
7033 9364 5.639506 GGTATGCAGTATACATCACCATGTC 59.360 44.000 10.48 0.00 42.66 3.06
7035 9366 5.357742 TGCAGTATACATCACCATGTCTT 57.642 39.130 5.50 0.00 42.66 3.01
7036 9367 5.118286 TGCAGTATACATCACCATGTCTTG 58.882 41.667 5.50 0.00 42.66 3.02
7037 9368 5.118990 GCAGTATACATCACCATGTCTTGT 58.881 41.667 5.50 0.00 42.66 3.16
7038 9369 5.007039 GCAGTATACATCACCATGTCTTGTG 59.993 44.000 5.50 0.00 42.66 3.33
7053 9384 4.816385 TGTCTTGTGTCTTGTGATCTTTCC 59.184 41.667 0.00 0.00 0.00 3.13
7065 9396 4.054671 GTGATCTTTCCTATGAGCTTCCG 58.945 47.826 0.00 0.00 0.00 4.30
7066 9397 3.960755 TGATCTTTCCTATGAGCTTCCGA 59.039 43.478 0.00 0.00 0.00 4.55
7067 9398 4.405680 TGATCTTTCCTATGAGCTTCCGAA 59.594 41.667 0.00 0.00 0.00 4.30
7068 9399 5.070981 TGATCTTTCCTATGAGCTTCCGAAT 59.929 40.000 0.00 0.00 0.00 3.34
7069 9400 4.697514 TCTTTCCTATGAGCTTCCGAATG 58.302 43.478 0.00 0.00 0.00 2.67
7070 9401 2.533266 TCCTATGAGCTTCCGAATGC 57.467 50.000 0.00 0.00 0.00 3.56
7071 9402 1.143305 CCTATGAGCTTCCGAATGCG 58.857 55.000 0.00 0.00 37.24 4.73
7085 9416 3.732943 CGAATGCGGTAGAAACTTTGAC 58.267 45.455 0.00 0.00 0.00 3.18
7089 9443 1.458445 GCGGTAGAAACTTTGACGGTC 59.542 52.381 0.00 0.00 0.00 4.79
7091 9445 2.473984 CGGTAGAAACTTTGACGGTCAC 59.526 50.000 10.97 0.00 0.00 3.67
7104 9458 0.389948 CGGTCACAGCTTCCACCTAC 60.390 60.000 3.76 0.00 0.00 3.18
7106 9460 2.176889 GGTCACAGCTTCCACCTACTA 58.823 52.381 0.00 0.00 0.00 1.82
7107 9461 2.766828 GGTCACAGCTTCCACCTACTAT 59.233 50.000 0.00 0.00 0.00 2.12
7108 9462 3.197983 GGTCACAGCTTCCACCTACTATT 59.802 47.826 0.00 0.00 0.00 1.73
7109 9463 4.323562 GGTCACAGCTTCCACCTACTATTT 60.324 45.833 0.00 0.00 0.00 1.40
7111 9465 4.530553 TCACAGCTTCCACCTACTATTTGA 59.469 41.667 0.00 0.00 0.00 2.69
7112 9466 4.872691 CACAGCTTCCACCTACTATTTGAG 59.127 45.833 0.00 0.00 0.00 3.02
7113 9467 3.873952 CAGCTTCCACCTACTATTTGAGC 59.126 47.826 0.00 0.00 0.00 4.26
7114 9468 3.519510 AGCTTCCACCTACTATTTGAGCA 59.480 43.478 0.00 0.00 0.00 4.26
7115 9469 4.019321 AGCTTCCACCTACTATTTGAGCAA 60.019 41.667 0.00 0.00 0.00 3.91
7116 9470 4.333926 GCTTCCACCTACTATTTGAGCAAG 59.666 45.833 0.00 0.00 0.00 4.01
7117 9471 3.873910 TCCACCTACTATTTGAGCAAGC 58.126 45.455 0.00 0.00 0.00 4.01
7118 9472 2.609459 CCACCTACTATTTGAGCAAGCG 59.391 50.000 0.00 0.00 0.00 4.68
7119 9473 2.030946 CACCTACTATTTGAGCAAGCGC 59.969 50.000 0.00 0.00 38.99 5.92
7160 9515 3.320541 AGATGAAGAACCGATAGCAGGAG 59.679 47.826 0.00 0.00 0.00 3.69
7161 9516 1.137086 TGAAGAACCGATAGCAGGAGC 59.863 52.381 0.00 0.00 42.56 4.70
7165 9520 2.297597 AGAACCGATAGCAGGAGCATAC 59.702 50.000 0.00 0.00 45.49 2.39
7166 9521 2.002505 ACCGATAGCAGGAGCATACT 57.997 50.000 0.00 0.00 45.49 2.12
7168 9523 1.615883 CCGATAGCAGGAGCATACTGT 59.384 52.381 4.59 0.00 45.49 3.55
7169 9524 2.820197 CCGATAGCAGGAGCATACTGTA 59.180 50.000 4.59 0.00 45.49 2.74
7170 9525 3.445450 CCGATAGCAGGAGCATACTGTAT 59.555 47.826 0.00 0.00 45.49 2.29
7171 9526 4.439426 CCGATAGCAGGAGCATACTGTATC 60.439 50.000 0.00 8.45 45.49 2.24
7172 9527 4.397730 CGATAGCAGGAGCATACTGTATCT 59.602 45.833 0.00 0.00 45.49 1.98
7174 9529 3.303938 AGCAGGAGCATACTGTATCTGT 58.696 45.455 12.85 0.00 45.49 3.41
7175 9530 4.474394 AGCAGGAGCATACTGTATCTGTA 58.526 43.478 12.85 0.00 45.49 2.74
7176 9531 5.083122 AGCAGGAGCATACTGTATCTGTAT 58.917 41.667 12.85 3.70 45.49 2.29
7178 9533 5.636965 GCAGGAGCATACTGTATCTGTATTG 59.363 44.000 12.85 4.32 41.58 1.90
7179 9534 6.739843 GCAGGAGCATACTGTATCTGTATTGT 60.740 42.308 12.85 0.00 41.58 2.71
7180 9535 7.523873 GCAGGAGCATACTGTATCTGTATTGTA 60.524 40.741 12.85 0.00 41.58 2.41
7181 9536 8.526978 CAGGAGCATACTGTATCTGTATTGTAT 58.473 37.037 0.00 0.00 0.00 2.29
7182 9537 8.526978 AGGAGCATACTGTATCTGTATTGTATG 58.473 37.037 0.00 0.00 39.77 2.39
7187 9542 6.791887 ACTGTATCTGTATTGTATGCATGC 57.208 37.500 11.82 11.82 0.00 4.06
7188 9543 6.290605 ACTGTATCTGTATTGTATGCATGCA 58.709 36.000 25.04 25.04 0.00 3.96
7190 9545 6.290605 TGTATCTGTATTGTATGCATGCAGT 58.709 36.000 26.69 16.78 0.00 4.40
7191 9546 7.441017 TGTATCTGTATTGTATGCATGCAGTA 58.559 34.615 26.69 15.75 0.00 2.74
7192 9547 7.930865 TGTATCTGTATTGTATGCATGCAGTAA 59.069 33.333 26.69 19.42 0.00 2.24
7194 9549 6.348498 TCTGTATTGTATGCATGCAGTAAGT 58.652 36.000 26.69 11.35 0.00 2.24
7198 9553 4.700268 TGTATGCATGCAGTAAGTTTGG 57.300 40.909 26.69 0.00 0.00 3.28
7200 9555 4.764308 TGTATGCATGCAGTAAGTTTGGAA 59.236 37.500 26.69 0.00 0.00 3.53
7201 9556 5.418524 TGTATGCATGCAGTAAGTTTGGAAT 59.581 36.000 26.69 6.68 0.00 3.01
7203 9558 2.925563 GCATGCAGTAAGTTTGGAATGC 59.074 45.455 14.21 0.00 0.00 3.56
7204 9559 3.614630 GCATGCAGTAAGTTTGGAATGCA 60.615 43.478 14.21 2.10 46.50 3.96
7206 9561 2.030007 TGCAGTAAGTTTGGAATGCAGC 60.030 45.455 0.00 0.00 38.64 5.25
7212 9567 2.590821 AGTTTGGAATGCAGCTGAACT 58.409 42.857 20.43 13.25 0.00 3.01
7213 9568 3.754965 AGTTTGGAATGCAGCTGAACTA 58.245 40.909 20.43 0.00 0.00 2.24
7216 9571 5.244626 AGTTTGGAATGCAGCTGAACTAAAT 59.755 36.000 20.43 0.00 0.00 1.40
7217 9572 4.970662 TGGAATGCAGCTGAACTAAATC 57.029 40.909 20.43 4.81 0.00 2.17
7219 9574 4.397103 TGGAATGCAGCTGAACTAAATCTG 59.603 41.667 20.43 0.00 0.00 2.90
7222 9577 3.402058 GCAGCTGAACTAAATCTGCAG 57.598 47.619 20.43 7.63 46.64 4.41
7224 9579 3.626670 GCAGCTGAACTAAATCTGCAGAT 59.373 43.478 23.75 23.75 46.64 2.90
7228 9583 7.468357 GCAGCTGAACTAAATCTGCAGATATTT 60.468 37.037 28.92 22.28 46.64 1.40
7229 9584 8.068977 CAGCTGAACTAAATCTGCAGATATTTC 58.931 37.037 28.92 24.20 44.09 2.17
7230 9585 7.992033 AGCTGAACTAAATCTGCAGATATTTCT 59.008 33.333 28.92 14.01 44.09 2.52
7239 9594 5.370679 TCTGCAGATATTTCTAATGCAGCA 58.629 37.500 13.74 0.00 42.22 4.41
7241 9596 7.163441 TCTGCAGATATTTCTAATGCAGCATA 58.837 34.615 13.74 0.00 42.22 3.14
7244 9599 7.229106 TGCAGATATTTCTAATGCAGCATAACA 59.771 33.333 8.75 0.00 0.00 2.41
7248 9603 9.713740 GATATTTCTAATGCAGCATAACATAGC 57.286 33.333 8.75 1.01 0.00 2.97
7249 9604 6.940831 TTTCTAATGCAGCATAACATAGCA 57.059 33.333 8.75 0.00 39.79 3.49
7251 9606 6.490566 TCTAATGCAGCATAACATAGCATG 57.509 37.500 8.75 0.00 44.40 4.06
7252 9607 6.232692 TCTAATGCAGCATAACATAGCATGA 58.767 36.000 8.75 0.00 44.40 3.07
7253 9608 5.777850 AATGCAGCATAACATAGCATGAA 57.222 34.783 8.75 0.00 44.40 2.57
7254 9609 5.977489 ATGCAGCATAACATAGCATGAAT 57.023 34.783 5.94 0.00 43.60 2.57
7255 9610 5.777850 TGCAGCATAACATAGCATGAATT 57.222 34.783 0.00 0.00 0.00 2.17
7257 9612 6.575267 TGCAGCATAACATAGCATGAATTTT 58.425 32.000 0.00 0.00 0.00 1.82
7258 9613 6.698329 TGCAGCATAACATAGCATGAATTTTC 59.302 34.615 0.00 0.00 0.00 2.29
7259 9614 6.145048 GCAGCATAACATAGCATGAATTTTCC 59.855 38.462 0.00 0.00 0.00 3.13
7260 9615 6.643770 CAGCATAACATAGCATGAATTTTCCC 59.356 38.462 0.00 0.00 0.00 3.97
7261 9616 6.552350 AGCATAACATAGCATGAATTTTCCCT 59.448 34.615 0.00 0.00 0.00 4.20
7262 9617 6.865205 GCATAACATAGCATGAATTTTCCCTC 59.135 38.462 0.00 0.00 0.00 4.30
7263 9618 7.470424 GCATAACATAGCATGAATTTTCCCTCA 60.470 37.037 0.00 0.00 0.00 3.86
7267 9622 8.537728 ACATAGCATGAATTTTCCCTCAAATA 57.462 30.769 0.00 0.00 0.00 1.40
7268 9623 8.980596 ACATAGCATGAATTTTCCCTCAAATAA 58.019 29.630 0.00 0.00 0.00 1.40
7269 9624 9.820725 CATAGCATGAATTTTCCCTCAAATAAA 57.179 29.630 0.00 0.00 0.00 1.40
7270 9625 9.822185 ATAGCATGAATTTTCCCTCAAATAAAC 57.178 29.630 0.00 0.00 0.00 2.01
7272 9627 8.323567 AGCATGAATTTTCCCTCAAATAAACAT 58.676 29.630 0.00 0.00 0.00 2.71
7273 9628 9.598517 GCATGAATTTTCCCTCAAATAAACATA 57.401 29.630 0.00 0.00 0.00 2.29
7275 9630 9.822185 ATGAATTTTCCCTCAAATAAACATAGC 57.178 29.630 0.00 0.00 0.00 2.97
7276 9631 8.811017 TGAATTTTCCCTCAAATAAACATAGCA 58.189 29.630 0.00 0.00 0.00 3.49
7277 9632 9.822185 GAATTTTCCCTCAAATAAACATAGCAT 57.178 29.630 0.00 0.00 0.00 3.79
7284 9639 8.641541 CCCTCAAATAAACATAGCATAAATGGT 58.358 33.333 0.00 0.00 41.93 3.55
7292 9647 8.677148 AAACATAGCATAAATGGTACTGTAGG 57.323 34.615 4.11 0.00 42.72 3.18
7293 9648 7.612065 ACATAGCATAAATGGTACTGTAGGA 57.388 36.000 4.11 0.00 42.72 2.94
7294 9649 7.671302 ACATAGCATAAATGGTACTGTAGGAG 58.329 38.462 4.11 0.00 42.72 3.69
7295 9650 7.290248 ACATAGCATAAATGGTACTGTAGGAGT 59.710 37.037 4.11 0.00 42.72 3.85
7298 9653 6.156256 AGCATAAATGGTACTGTAGGAGTGAA 59.844 38.462 0.00 0.00 36.64 3.18
7299 9654 6.480320 GCATAAATGGTACTGTAGGAGTGAAG 59.520 42.308 0.00 0.00 35.96 3.02
7311 10192 8.095169 ACTGTAGGAGTGAAGTTCGAAAATATT 58.905 33.333 0.00 0.00 31.75 1.28
7313 10194 8.932791 TGTAGGAGTGAAGTTCGAAAATATTTC 58.067 33.333 0.00 0.41 0.00 2.17
7314 10195 9.152595 GTAGGAGTGAAGTTCGAAAATATTTCT 57.847 33.333 0.00 0.00 0.00 2.52
7315 10196 8.034058 AGGAGTGAAGTTCGAAAATATTTCTG 57.966 34.615 0.00 0.00 0.00 3.02
7317 10198 8.669243 GGAGTGAAGTTCGAAAATATTTCTGAT 58.331 33.333 0.00 0.00 0.00 2.90
7321 10253 7.964559 TGAAGTTCGAAAATATTTCTGATGCAG 59.035 33.333 0.00 0.00 0.00 4.41
7322 10254 6.261118 AGTTCGAAAATATTTCTGATGCAGC 58.739 36.000 0.00 0.00 0.00 5.25
7325 10257 6.798482 TCGAAAATATTTCTGATGCAGCATT 58.202 32.000 9.90 0.00 0.00 3.56
7328 10260 7.859377 CGAAAATATTTCTGATGCAGCATTACT 59.141 33.333 9.90 0.00 0.00 2.24
7386 10320 5.039333 CACTGAACTCTTGCTTGGAAAAAG 58.961 41.667 0.00 0.00 0.00 2.27
7387 10321 4.098501 ACTGAACTCTTGCTTGGAAAAAGG 59.901 41.667 0.00 0.00 0.00 3.11
7388 10322 4.277476 TGAACTCTTGCTTGGAAAAAGGA 58.723 39.130 0.00 0.00 0.00 3.36
7389 10323 4.097892 TGAACTCTTGCTTGGAAAAAGGAC 59.902 41.667 0.00 0.00 0.00 3.85
7390 10324 3.631250 ACTCTTGCTTGGAAAAAGGACA 58.369 40.909 0.00 0.00 0.00 4.02
7391 10325 3.381590 ACTCTTGCTTGGAAAAAGGACAC 59.618 43.478 0.00 0.00 0.00 3.67
7392 10326 3.631250 TCTTGCTTGGAAAAAGGACACT 58.369 40.909 0.00 0.00 0.00 3.55
7425 10833 4.712122 TGTCTTCTTTTTGACCGCTTTT 57.288 36.364 0.00 0.00 32.67 2.27
7437 10845 0.242017 CCGCTTTTGAGCCTTGGAAG 59.758 55.000 0.00 0.00 0.00 3.46
7491 11761 5.541845 CCATACAGAGACACTTTTGACTCA 58.458 41.667 6.84 0.00 44.26 3.41
7575 11849 2.490148 CGCGGCATAGAGGGACAGA 61.490 63.158 0.00 0.00 0.00 3.41
7591 11865 0.312416 CAGACGATCTGGTCCGATCC 59.688 60.000 14.29 5.54 40.71 3.36
7604 11878 0.107654 CCGATCCAACCCCAAGAGAC 60.108 60.000 0.00 0.00 0.00 3.36
7614 11888 0.184933 CCCAAGAGACCAACCAACCA 59.815 55.000 0.00 0.00 0.00 3.67
7631 11905 1.566018 CCAAACCCGAACAGACGAGC 61.566 60.000 0.00 0.00 35.09 5.03
7640 11914 4.821589 CAGACGAGCCGCCTTCCC 62.822 72.222 0.00 0.00 0.00 3.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.095610 AGTTTGTTTGTTTTTCGAGAGCG 58.904 39.130 0.00 0.00 39.35 5.03
12 13 2.036086 CGCGGAGTTTGTTTGTTTTTCG 60.036 45.455 0.00 0.00 0.00 3.46
18 19 0.655733 CTCACGCGGAGTTTGTTTGT 59.344 50.000 12.47 0.00 38.90 2.83
19 20 0.934496 TCTCACGCGGAGTTTGTTTG 59.066 50.000 12.47 0.00 44.40 2.93
20 21 1.329599 GTTCTCACGCGGAGTTTGTTT 59.670 47.619 12.47 0.00 44.40 2.83
21 22 0.935196 GTTCTCACGCGGAGTTTGTT 59.065 50.000 12.47 0.00 44.40 2.83
22 23 1.213094 CGTTCTCACGCGGAGTTTGT 61.213 55.000 12.47 0.00 44.40 2.83
38 39 1.943693 GCACATGCGCACAAACGTT 60.944 52.632 14.90 0.00 34.88 3.99
39 40 2.353376 GCACATGCGCACAAACGT 60.353 55.556 14.90 1.76 34.88 3.99
83 84 1.281656 GGCCGTTCGGTTTCTTGTG 59.718 57.895 12.81 0.00 0.00 3.33
102 103 4.992951 GCCTGCAATTTCTGAAACAAGAAT 59.007 37.500 4.73 0.00 36.12 2.40
103 104 4.370917 GCCTGCAATTTCTGAAACAAGAA 58.629 39.130 4.73 0.00 34.36 2.52
136 137 2.029486 CGTGTGTTTTTCTCGACGGAAA 59.971 45.455 7.22 7.22 33.98 3.13
138 139 1.202203 CGTGTGTTTTTCTCGACGGA 58.798 50.000 0.00 0.00 0.00 4.69
140 141 1.850441 ACTCGTGTGTTTTTCTCGACG 59.150 47.619 0.00 0.00 0.00 5.12
141 142 5.379757 TTTACTCGTGTGTTTTTCTCGAC 57.620 39.130 0.00 0.00 0.00 4.20
143 144 5.064367 CGATTTACTCGTGTGTTTTTCTCG 58.936 41.667 0.00 0.00 42.56 4.04
166 167 2.158726 TCCCTGTTATTATTCCGTGGGC 60.159 50.000 0.00 0.00 33.77 5.36
169 170 3.128349 CGGTCCCTGTTATTATTCCGTG 58.872 50.000 0.00 0.00 33.39 4.94
171 172 2.140717 GCGGTCCCTGTTATTATTCCG 58.859 52.381 0.00 0.00 39.71 4.30
172 173 3.202829 TGCGGTCCCTGTTATTATTCC 57.797 47.619 0.00 0.00 0.00 3.01
173 174 4.213482 GTGATGCGGTCCCTGTTATTATTC 59.787 45.833 0.00 0.00 0.00 1.75
174 175 4.134563 GTGATGCGGTCCCTGTTATTATT 58.865 43.478 0.00 0.00 0.00 1.40
177 178 1.280710 TGTGATGCGGTCCCTGTTATT 59.719 47.619 0.00 0.00 0.00 1.40
179 180 0.036765 GTGTGATGCGGTCCCTGTTA 60.037 55.000 0.00 0.00 0.00 2.41
180 181 1.302511 GTGTGATGCGGTCCCTGTT 60.303 57.895 0.00 0.00 0.00 3.16
181 182 2.347490 GTGTGATGCGGTCCCTGT 59.653 61.111 0.00 0.00 0.00 4.00
182 183 2.436646 GGTGTGATGCGGTCCCTG 60.437 66.667 0.00 0.00 0.00 4.45
184 185 2.746277 GTGGTGTGATGCGGTCCC 60.746 66.667 0.00 0.00 0.00 4.46
186 187 2.325082 GGTGTGGTGTGATGCGGTC 61.325 63.158 0.00 0.00 0.00 4.79
187 188 2.281484 GGTGTGGTGTGATGCGGT 60.281 61.111 0.00 0.00 0.00 5.68
188 189 2.281414 TGGTGTGGTGTGATGCGG 60.281 61.111 0.00 0.00 0.00 5.69
189 190 1.891449 TGTGGTGTGGTGTGATGCG 60.891 57.895 0.00 0.00 0.00 4.73
190 191 1.654220 GTGTGGTGTGGTGTGATGC 59.346 57.895 0.00 0.00 0.00 3.91
191 192 1.941072 CGTGTGGTGTGGTGTGATG 59.059 57.895 0.00 0.00 0.00 3.07
192 193 1.891919 GCGTGTGGTGTGGTGTGAT 60.892 57.895 0.00 0.00 0.00 3.06
193 194 2.512745 GCGTGTGGTGTGGTGTGA 60.513 61.111 0.00 0.00 0.00 3.58
233 1023 1.884926 GATCTACTGCTGCGGGTGC 60.885 63.158 13.87 0.00 43.20 5.01
243 1033 2.307098 GGGATTGGGATGGGATCTACTG 59.693 54.545 0.00 0.00 0.00 2.74
259 1843 2.359011 GGCGGGTGGAAAGGGATT 59.641 61.111 0.00 0.00 0.00 3.01
306 1890 2.347490 GCGTGTGGGTCAGTGGAT 59.653 61.111 0.00 0.00 0.00 3.41
440 2039 4.093291 AGAGCGCTTGGGCCTGAG 62.093 66.667 13.26 3.91 34.44 3.35
441 2040 4.087892 GAGAGCGCTTGGGCCTGA 62.088 66.667 13.26 0.00 34.44 3.86
909 2510 2.146061 GCTGATGCTAGCTCCCCCT 61.146 63.158 17.23 0.00 40.52 4.79
992 2906 3.727258 CCTCGTCCATTGGGGGCA 61.727 66.667 2.09 0.00 43.46 5.36
1109 3023 2.710902 GGCCGCCTTCCAAATCACC 61.711 63.158 0.71 0.00 0.00 4.02
1128 3042 4.217550 CACCATCAAGTAAAACCCGAACAT 59.782 41.667 0.00 0.00 0.00 2.71
1234 3148 9.125026 CCAGCCAATTATATACCCAGAATAATC 57.875 37.037 0.00 0.00 0.00 1.75
1514 3437 9.252962 CAGCTTTTGTTGTATCAAAGAATTTCT 57.747 29.630 0.00 0.00 35.03 2.52
1622 3582 3.695556 GGAGAGAGGGAGTAGTACACAAC 59.304 52.174 2.52 0.00 0.00 3.32
1688 3648 7.661127 ACAAACACACTAAAATGCGTCTATA 57.339 32.000 0.00 0.00 0.00 1.31
1689 3649 6.554334 ACAAACACACTAAAATGCGTCTAT 57.446 33.333 0.00 0.00 0.00 1.98
1807 3779 3.443681 CCACAAGAAACTGGTTGTTGACT 59.556 43.478 20.50 0.00 41.85 3.41
1808 3780 3.192633 ACCACAAGAAACTGGTTGTTGAC 59.807 43.478 20.50 0.00 41.85 3.18
1809 3781 3.426615 ACCACAAGAAACTGGTTGTTGA 58.573 40.909 20.50 0.00 41.85 3.18
1810 3782 3.192422 TGACCACAAGAAACTGGTTGTTG 59.808 43.478 13.13 13.13 44.20 3.33
1811 3783 3.426615 TGACCACAAGAAACTGGTTGTT 58.573 40.909 0.00 0.00 41.09 2.83
1812 3784 3.080300 TGACCACAAGAAACTGGTTGT 57.920 42.857 0.00 0.00 41.09 3.32
1813 3785 4.142182 ACAATGACCACAAGAAACTGGTTG 60.142 41.667 0.00 0.00 41.09 3.77
1814 3786 4.023291 ACAATGACCACAAGAAACTGGTT 58.977 39.130 0.00 0.00 41.09 3.67
1815 3787 3.631250 ACAATGACCACAAGAAACTGGT 58.369 40.909 0.00 0.00 43.86 4.00
1816 3788 4.610945 GAACAATGACCACAAGAAACTGG 58.389 43.478 0.00 0.00 0.00 4.00
1817 3789 4.201910 ACGAACAATGACCACAAGAAACTG 60.202 41.667 0.00 0.00 0.00 3.16
1818 3790 3.945285 ACGAACAATGACCACAAGAAACT 59.055 39.130 0.00 0.00 0.00 2.66
2151 4123 2.847901 GAGCATATGCGCTGCAATTAG 58.152 47.619 22.41 0.00 44.01 1.73
2245 4217 5.723672 TTTCTATATTCCTGTCCGCCTAG 57.276 43.478 0.00 0.00 0.00 3.02
2254 4226 8.887717 CAGAACTTCACCTTTTCTATATTCCTG 58.112 37.037 0.00 0.00 0.00 3.86
2303 4275 5.236478 ACTTGAAGACAATAACGTCTGTTGG 59.764 40.000 0.00 0.00 45.56 3.77
2318 4290 8.154649 TGGAGAAAGAACAAATACTTGAAGAC 57.845 34.615 0.00 0.00 36.33 3.01
2320 4292 9.455847 CTTTGGAGAAAGAACAAATACTTGAAG 57.544 33.333 0.00 0.00 41.12 3.02
2321 4293 8.413229 CCTTTGGAGAAAGAACAAATACTTGAA 58.587 33.333 0.00 0.00 41.12 2.69
2322 4294 7.777910 TCCTTTGGAGAAAGAACAAATACTTGA 59.222 33.333 0.00 0.00 41.12 3.02
2480 4455 6.430925 TGCAGAGTAGTGAATACAAAGCAAAT 59.569 34.615 0.00 0.00 35.15 2.32
2790 4765 3.124806 CAGCATGAGATGTGACAACTGAC 59.875 47.826 0.00 0.00 39.69 3.51
2885 4860 6.187682 TGGGGGAAAATAAAGAAGAAGCTAG 58.812 40.000 0.00 0.00 0.00 3.42
3118 5121 6.149807 CCTTTTTAGTCCGCATGTAAGGTTTA 59.850 38.462 0.00 0.00 0.00 2.01
3163 5166 0.321653 ATCACAGGAACGGGTTGCTC 60.322 55.000 2.37 0.00 39.28 4.26
3261 5264 6.126710 TGGAAGTTCACTTACCCACTCTAAAA 60.127 38.462 5.01 0.00 35.94 1.52
3264 5267 4.485875 TGGAAGTTCACTTACCCACTCTA 58.514 43.478 5.01 0.00 35.94 2.43
3305 5308 2.481952 GTCTGGAGATGCTTGTGTTGTC 59.518 50.000 0.00 0.00 0.00 3.18
3497 5500 3.009723 GCAGGTAATTTGAGCTACAGCA 58.990 45.455 3.70 0.00 45.16 4.41
3592 5595 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3593 5596 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3594 5597 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3595 5598 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3596 5599 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
3597 5600 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3598 5601 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
3599 5602 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
3600 5603 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
3601 5604 4.755123 AGTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
3602 5605 6.635030 AAGTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
3603 5606 6.605594 ACAAAGTTGAGTCACTTATTTTGGGA 59.394 34.615 12.94 0.00 35.87 4.37
3604 5607 6.805713 ACAAAGTTGAGTCACTTATTTTGGG 58.194 36.000 12.94 0.00 35.87 4.12
3605 5608 8.621286 AGTACAAAGTTGAGTCACTTATTTTGG 58.379 33.333 12.94 0.78 35.87 3.28
3608 5611 8.989980 GCTAGTACAAAGTTGAGTCACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
3609 5612 8.368668 AGCTAGTACAAAGTTGAGTCACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
3610 5613 7.897864 AGCTAGTACAAAGTTGAGTCACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
3611 5614 7.286215 AGCTAGTACAAAGTTGAGTCACTTA 57.714 36.000 0.00 0.00 35.87 2.24
3612 5615 6.163135 AGCTAGTACAAAGTTGAGTCACTT 57.837 37.500 0.00 0.00 38.74 3.16
3613 5616 5.793030 AGCTAGTACAAAGTTGAGTCACT 57.207 39.130 0.00 0.00 0.00 3.41
3614 5617 6.846325 AAAGCTAGTACAAAGTTGAGTCAC 57.154 37.500 0.00 0.00 0.00 3.67
3615 5618 7.723324 ACTAAAGCTAGTACAAAGTTGAGTCA 58.277 34.615 0.00 0.00 36.56 3.41
3632 5635 9.828039 ACTTTGTACTAACTTTGTACTAAAGCT 57.172 29.630 21.28 7.77 39.34 3.74
3636 5639 9.669353 CTCGACTTTGTACTAACTTTGTACTAA 57.331 33.333 12.73 10.75 40.44 2.24
3637 5640 8.840321 ACTCGACTTTGTACTAACTTTGTACTA 58.160 33.333 12.73 4.86 40.44 1.82
3638 5641 7.710896 ACTCGACTTTGTACTAACTTTGTACT 58.289 34.615 12.73 0.00 40.44 2.73
3639 5642 7.645340 TGACTCGACTTTGTACTAACTTTGTAC 59.355 37.037 6.58 6.58 40.27 2.90
3640 5643 7.645340 GTGACTCGACTTTGTACTAACTTTGTA 59.355 37.037 0.00 0.00 0.00 2.41
3641 5644 6.474751 GTGACTCGACTTTGTACTAACTTTGT 59.525 38.462 0.00 0.00 0.00 2.83
3642 5645 6.696148 AGTGACTCGACTTTGTACTAACTTTG 59.304 38.462 0.00 0.00 0.00 2.77
3643 5646 6.803642 AGTGACTCGACTTTGTACTAACTTT 58.196 36.000 0.00 0.00 0.00 2.66
3644 5647 6.388435 AGTGACTCGACTTTGTACTAACTT 57.612 37.500 0.00 0.00 0.00 2.66
3645 5648 6.388435 AAGTGACTCGACTTTGTACTAACT 57.612 37.500 0.00 0.00 31.92 2.24
3646 5649 8.739649 AATAAGTGACTCGACTTTGTACTAAC 57.260 34.615 0.00 0.00 37.38 2.34
3647 5650 9.754382 AAAATAAGTGACTCGACTTTGTACTAA 57.246 29.630 0.00 0.00 37.38 2.24
3648 5651 9.188588 CAAAATAAGTGACTCGACTTTGTACTA 57.811 33.333 0.00 0.00 37.38 1.82
3649 5652 7.170998 CCAAAATAAGTGACTCGACTTTGTACT 59.829 37.037 0.00 0.00 37.38 2.73
3650 5653 7.288672 CCAAAATAAGTGACTCGACTTTGTAC 58.711 38.462 0.00 0.00 37.38 2.90
3651 5654 6.425721 CCCAAAATAAGTGACTCGACTTTGTA 59.574 38.462 0.00 0.00 37.38 2.41
3652 5655 5.238650 CCCAAAATAAGTGACTCGACTTTGT 59.761 40.000 0.00 0.00 37.38 2.83
3653 5656 5.468746 TCCCAAAATAAGTGACTCGACTTTG 59.531 40.000 0.00 0.00 37.38 2.77
3654 5657 5.469084 GTCCCAAAATAAGTGACTCGACTTT 59.531 40.000 0.00 0.00 37.38 2.66
3655 5658 4.995487 GTCCCAAAATAAGTGACTCGACTT 59.005 41.667 0.00 0.00 39.54 3.01
3656 5659 4.566987 GTCCCAAAATAAGTGACTCGACT 58.433 43.478 0.00 0.00 0.00 4.18
3657 5660 3.367025 CGTCCCAAAATAAGTGACTCGAC 59.633 47.826 0.00 0.00 0.00 4.20
3658 5661 3.581755 CGTCCCAAAATAAGTGACTCGA 58.418 45.455 0.00 0.00 0.00 4.04
3659 5662 2.671396 CCGTCCCAAAATAAGTGACTCG 59.329 50.000 0.00 0.00 0.00 4.18
3660 5663 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
3661 5664 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
3662 5665 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
3663 5666 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
3664 5667 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3665 5668 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3666 5669 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3667 5670 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3668 5671 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3669 5672 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3670 5673 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
3671 5674 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
3672 5675 2.023695 AGTAATACTCCCTCCGTCCCAA 60.024 50.000 0.00 0.00 0.00 4.12
3673 5676 1.572415 AGTAATACTCCCTCCGTCCCA 59.428 52.381 0.00 0.00 0.00 4.37
3674 5677 2.378378 AGTAATACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
3675 5678 4.277921 CACTAAGTAATACTCCCTCCGTCC 59.722 50.000 0.00 0.00 0.00 4.79
3676 5679 4.886489 ACACTAAGTAATACTCCCTCCGTC 59.114 45.833 0.00 0.00 0.00 4.79
3677 5680 4.864726 ACACTAAGTAATACTCCCTCCGT 58.135 43.478 0.00 0.00 0.00 4.69
3678 5681 6.060788 AGTACACTAAGTAATACTCCCTCCG 58.939 44.000 0.00 0.00 33.72 4.63
3679 5682 7.894753 AAGTACACTAAGTAATACTCCCTCC 57.105 40.000 0.00 0.00 33.72 4.30
3768 5771 4.622740 GCAACCGATTCTTTCCAATTTCAG 59.377 41.667 0.00 0.00 0.00 3.02
3806 5809 8.274322 TCAATGTTCCATCTGTTACCTATCAAT 58.726 33.333 0.00 0.00 0.00 2.57
4036 6040 2.319472 GAAGAAATCAACGGCAACAGC 58.681 47.619 0.00 0.00 0.00 4.40
4259 6264 7.436673 GCGGATGATATTATAGAGACCAATGAC 59.563 40.741 0.00 0.00 0.00 3.06
4544 6549 8.200792 AGGTCACAACTCATATATGAAGTTCTC 58.799 37.037 16.08 10.78 36.18 2.87
4769 7034 1.481871 ATTCTCAGGCATGCTTTGGG 58.518 50.000 18.92 16.10 0.00 4.12
4915 7180 4.006319 GCTTGACAATAGAGAAGGTTGCT 58.994 43.478 0.00 0.00 0.00 3.91
5032 7297 3.441572 CAGCTAAACAAAGGACCATCAGG 59.558 47.826 0.00 0.00 42.21 3.86
5098 7363 2.427232 TGAAGTGGTCGAACTTACCG 57.573 50.000 0.33 0.00 40.48 4.02
5126 7391 7.509318 AGTGTACCATAGGATCTGCATAGTTTA 59.491 37.037 0.00 0.00 0.00 2.01
5276 7541 3.286353 TGGTTGAATCAAGAACAGTGCA 58.714 40.909 0.00 0.00 0.00 4.57
5277 7542 3.988379 TGGTTGAATCAAGAACAGTGC 57.012 42.857 0.00 0.00 0.00 4.40
5356 7623 3.246936 CCACATCAATGAGATACGCACAG 59.753 47.826 0.00 0.00 34.43 3.66
5357 7624 3.197265 CCACATCAATGAGATACGCACA 58.803 45.455 0.00 0.00 34.43 4.57
5359 7626 2.212652 GCCACATCAATGAGATACGCA 58.787 47.619 0.00 0.00 34.43 5.24
5721 7993 0.242825 TACGAGGAACGACAAGGCAG 59.757 55.000 0.00 0.00 45.77 4.85
5738 8010 3.877508 CCCTCAATTGACCCGAAGAATAC 59.122 47.826 3.38 0.00 0.00 1.89
5751 8023 0.583438 CAGATACGCGCCCTCAATTG 59.417 55.000 5.73 0.00 0.00 2.32
5863 8135 0.961019 ACAGGTACTTTCGCCGTGTA 59.039 50.000 0.00 0.00 34.60 2.90
6082 8354 3.270027 CCGCTCATCAACTGGAACATAA 58.730 45.455 0.00 0.00 38.20 1.90
6163 8435 5.880332 GTCTTTCTGCACATCCTTATAACCA 59.120 40.000 0.00 0.00 0.00 3.67
6178 8450 3.060098 CGAAGTTCTCATCGTCTTTCTGC 59.940 47.826 0.56 0.00 34.48 4.26
6226 8498 3.056607 CGGCTTCCATTTGGATGAACTTT 60.057 43.478 14.77 0.00 44.98 2.66
6274 8546 1.472878 CTTCCCTCGTTCGATGACTCA 59.527 52.381 0.00 0.00 0.00 3.41
6449 8721 4.452733 GACCTGGAAGCGGACCCG 62.453 72.222 0.00 3.73 43.09 5.28
6457 8729 3.068691 TCCTCGGCGACCTGGAAG 61.069 66.667 13.27 0.00 0.00 3.46
6464 8736 4.200283 CTGCTCCTCCTCGGCGAC 62.200 72.222 4.99 0.00 0.00 5.19
6497 8769 4.477975 GTCCGACAGCTCGTCCCG 62.478 72.222 9.71 2.08 42.07 5.14
6535 8807 1.520564 GATGATGTACGCCACGCCA 60.521 57.895 0.00 0.00 0.00 5.69
6634 8906 2.361737 GGGCCCCTGCAGTTCTTC 60.362 66.667 12.23 0.00 40.13 2.87
6801 9073 2.046892 AACGGTGGCAGCTAGCTG 60.047 61.111 35.54 35.54 46.15 4.24
6802 9074 2.266055 GAACGGTGGCAGCTAGCT 59.734 61.111 12.68 12.68 44.79 3.32
6814 9088 2.112815 GCCCCGGAATTCAGAACGG 61.113 63.158 0.73 10.54 45.57 4.44
6988 9319 4.008330 CCATCTGTTGTTCATCTCAAGCT 58.992 43.478 0.00 0.00 0.00 3.74
7004 9335 5.871524 GGTGATGTATACTGCATACCATCTG 59.128 44.000 4.17 0.00 39.08 2.90
7005 9336 5.543790 TGGTGATGTATACTGCATACCATCT 59.456 40.000 4.17 0.00 39.08 2.90
7008 9339 5.071653 ACATGGTGATGTATACTGCATACCA 59.928 40.000 15.26 15.26 41.27 3.25
7009 9340 5.551233 ACATGGTGATGTATACTGCATACC 58.449 41.667 4.17 6.45 41.27 2.73
7026 9357 3.558931 TCACAAGACACAAGACATGGT 57.441 42.857 0.00 0.00 0.00 3.55
7027 9358 4.321718 AGATCACAAGACACAAGACATGG 58.678 43.478 0.00 0.00 0.00 3.66
7028 9359 5.936686 AAGATCACAAGACACAAGACATG 57.063 39.130 0.00 0.00 0.00 3.21
7029 9360 5.471456 GGAAAGATCACAAGACACAAGACAT 59.529 40.000 0.00 0.00 0.00 3.06
7030 9361 4.816385 GGAAAGATCACAAGACACAAGACA 59.184 41.667 0.00 0.00 0.00 3.41
7031 9362 5.059833 AGGAAAGATCACAAGACACAAGAC 58.940 41.667 0.00 0.00 0.00 3.01
7032 9363 5.296151 AGGAAAGATCACAAGACACAAGA 57.704 39.130 0.00 0.00 0.00 3.02
7033 9364 6.875726 TCATAGGAAAGATCACAAGACACAAG 59.124 38.462 0.00 0.00 0.00 3.16
7035 9366 6.358974 TCATAGGAAAGATCACAAGACACA 57.641 37.500 0.00 0.00 0.00 3.72
7036 9367 5.293079 GCTCATAGGAAAGATCACAAGACAC 59.707 44.000 0.00 0.00 0.00 3.67
7037 9368 5.188555 AGCTCATAGGAAAGATCACAAGACA 59.811 40.000 0.00 0.00 0.00 3.41
7038 9369 5.669477 AGCTCATAGGAAAGATCACAAGAC 58.331 41.667 0.00 0.00 0.00 3.01
7065 9396 3.424433 CCGTCAAAGTTTCTACCGCATTC 60.424 47.826 0.00 0.00 0.00 2.67
7066 9397 2.482721 CCGTCAAAGTTTCTACCGCATT 59.517 45.455 0.00 0.00 0.00 3.56
7067 9398 2.073816 CCGTCAAAGTTTCTACCGCAT 58.926 47.619 0.00 0.00 0.00 4.73
7068 9399 1.202557 ACCGTCAAAGTTTCTACCGCA 60.203 47.619 0.00 0.00 0.00 5.69
7069 9400 1.458445 GACCGTCAAAGTTTCTACCGC 59.542 52.381 0.00 0.00 0.00 5.68
7070 9401 2.473984 GTGACCGTCAAAGTTTCTACCG 59.526 50.000 1.88 0.00 0.00 4.02
7071 9402 3.460103 TGTGACCGTCAAAGTTTCTACC 58.540 45.455 1.88 0.00 0.00 3.18
7072 9403 3.059800 GCTGTGACCGTCAAAGTTTCTAC 60.060 47.826 18.21 0.00 34.20 2.59
7073 9404 3.128349 GCTGTGACCGTCAAAGTTTCTA 58.872 45.455 18.21 0.00 34.20 2.10
7074 9405 1.940613 GCTGTGACCGTCAAAGTTTCT 59.059 47.619 18.21 0.00 34.20 2.52
7075 9406 1.940613 AGCTGTGACCGTCAAAGTTTC 59.059 47.619 18.21 4.09 34.20 2.78
7076 9407 2.038387 AGCTGTGACCGTCAAAGTTT 57.962 45.000 18.21 6.36 34.20 2.66
7077 9408 1.940613 GAAGCTGTGACCGTCAAAGTT 59.059 47.619 18.21 10.93 34.20 2.66
7079 9410 0.868406 GGAAGCTGTGACCGTCAAAG 59.132 55.000 13.69 13.69 34.82 2.77
7080 9411 0.179234 TGGAAGCTGTGACCGTCAAA 59.821 50.000 1.88 0.00 0.00 2.69
7081 9412 0.531974 GTGGAAGCTGTGACCGTCAA 60.532 55.000 1.88 0.00 0.00 3.18
7082 9413 1.069090 GTGGAAGCTGTGACCGTCA 59.931 57.895 0.00 0.00 0.00 4.35
7083 9414 1.668151 GGTGGAAGCTGTGACCGTC 60.668 63.158 0.00 0.00 0.00 4.79
7104 9458 0.940126 ATCGGCGCTTGCTCAAATAG 59.060 50.000 7.64 0.00 39.13 1.73
7106 9460 0.745845 AGATCGGCGCTTGCTCAAAT 60.746 50.000 7.64 0.00 39.13 2.32
7107 9461 1.375908 AGATCGGCGCTTGCTCAAA 60.376 52.632 7.64 0.00 39.13 2.69
7108 9462 2.102438 CAGATCGGCGCTTGCTCAA 61.102 57.895 7.64 0.00 39.13 3.02
7109 9463 2.510012 CAGATCGGCGCTTGCTCA 60.510 61.111 7.64 0.00 39.13 4.26
7111 9465 4.087892 ACCAGATCGGCGCTTGCT 62.088 61.111 7.64 0.00 39.03 3.91
7112 9466 3.567797 GACCAGATCGGCGCTTGC 61.568 66.667 7.64 0.00 39.03 4.01
7113 9467 1.880340 GAGACCAGATCGGCGCTTG 60.880 63.158 7.64 0.00 39.03 4.01
7114 9468 1.888436 TTGAGACCAGATCGGCGCTT 61.888 55.000 7.64 0.00 39.03 4.68
7115 9469 2.351244 TTGAGACCAGATCGGCGCT 61.351 57.895 7.64 0.00 39.03 5.92
7116 9470 2.167861 GTTGAGACCAGATCGGCGC 61.168 63.158 0.00 0.00 39.03 6.53
7117 9471 0.108615 AAGTTGAGACCAGATCGGCG 60.109 55.000 0.00 0.00 39.03 6.46
7118 9472 1.066858 TCAAGTTGAGACCAGATCGGC 60.067 52.381 0.08 0.00 39.03 5.54
7142 9497 1.137086 TGCTCCTGCTATCGGTTCTTC 59.863 52.381 0.00 0.00 40.48 2.87
7149 9504 4.397730 AGATACAGTATGCTCCTGCTATCG 59.602 45.833 0.00 0.00 42.53 2.92
7161 9516 8.385858 GCATGCATACAATACAGATACAGTATG 58.614 37.037 14.21 0.00 46.00 2.39
7165 9520 6.426025 ACTGCATGCATACAATACAGATACAG 59.574 38.462 22.97 5.44 31.82 2.74
7166 9521 6.290605 ACTGCATGCATACAATACAGATACA 58.709 36.000 22.97 0.00 31.82 2.29
7168 9523 8.150296 ACTTACTGCATGCATACAATACAGATA 58.850 33.333 22.97 0.00 31.82 1.98
7169 9524 6.994496 ACTTACTGCATGCATACAATACAGAT 59.006 34.615 22.97 0.18 31.82 2.90
7170 9525 6.348498 ACTTACTGCATGCATACAATACAGA 58.652 36.000 22.97 0.00 31.82 3.41
7171 9526 6.609237 ACTTACTGCATGCATACAATACAG 57.391 37.500 22.97 8.59 32.95 2.74
7172 9527 7.249858 CAAACTTACTGCATGCATACAATACA 58.750 34.615 22.97 0.00 0.00 2.29
7174 9529 6.601217 TCCAAACTTACTGCATGCATACAATA 59.399 34.615 22.97 6.27 0.00 1.90
7175 9530 5.418524 TCCAAACTTACTGCATGCATACAAT 59.581 36.000 22.97 4.36 0.00 2.71
7176 9531 4.764308 TCCAAACTTACTGCATGCATACAA 59.236 37.500 22.97 13.92 0.00 2.41
7178 9533 4.963276 TCCAAACTTACTGCATGCATAC 57.037 40.909 22.97 0.00 0.00 2.39
7179 9534 5.679382 GCATTCCAAACTTACTGCATGCATA 60.679 40.000 22.97 12.80 36.59 3.14
7180 9535 4.751060 CATTCCAAACTTACTGCATGCAT 58.249 39.130 22.97 13.83 0.00 3.96
7181 9536 3.614630 GCATTCCAAACTTACTGCATGCA 60.615 43.478 21.29 21.29 36.59 3.96
7182 9537 2.925563 GCATTCCAAACTTACTGCATGC 59.074 45.455 11.82 11.82 0.00 4.06
7183 9538 4.171005 CTGCATTCCAAACTTACTGCATG 58.829 43.478 0.00 0.00 38.76 4.06
7184 9539 3.367703 GCTGCATTCCAAACTTACTGCAT 60.368 43.478 0.00 0.00 38.76 3.96
7185 9540 2.030007 GCTGCATTCCAAACTTACTGCA 60.030 45.455 0.00 0.00 37.93 4.41
7186 9541 2.229784 AGCTGCATTCCAAACTTACTGC 59.770 45.455 1.02 0.00 0.00 4.40
7187 9542 3.503363 TCAGCTGCATTCCAAACTTACTG 59.497 43.478 9.47 0.00 0.00 2.74
7188 9543 3.754965 TCAGCTGCATTCCAAACTTACT 58.245 40.909 9.47 0.00 0.00 2.24
7190 9545 4.144297 AGTTCAGCTGCATTCCAAACTTA 58.856 39.130 9.47 0.00 0.00 2.24
7191 9546 2.961062 AGTTCAGCTGCATTCCAAACTT 59.039 40.909 9.47 0.00 0.00 2.66
7192 9547 2.590821 AGTTCAGCTGCATTCCAAACT 58.409 42.857 9.47 8.86 0.00 2.66
7194 9549 5.477984 AGATTTAGTTCAGCTGCATTCCAAA 59.522 36.000 9.47 4.81 0.00 3.28
7203 9558 7.493743 AATATCTGCAGATTTAGTTCAGCTG 57.506 36.000 32.94 7.63 36.05 4.24
7204 9559 7.992033 AGAAATATCTGCAGATTTAGTTCAGCT 59.008 33.333 32.94 12.84 36.05 4.24
7212 9567 8.509690 GCTGCATTAGAAATATCTGCAGATTTA 58.490 33.333 32.94 17.68 45.88 1.40
7213 9568 7.013942 TGCTGCATTAGAAATATCTGCAGATTT 59.986 33.333 32.94 22.90 45.88 2.17
7216 9571 5.370679 TGCTGCATTAGAAATATCTGCAGA 58.629 37.500 20.79 20.79 45.88 4.26
7217 9572 5.684550 TGCTGCATTAGAAATATCTGCAG 57.315 39.130 16.28 16.28 45.82 4.41
7219 9574 7.587629 TGTTATGCTGCATTAGAAATATCTGC 58.412 34.615 21.56 0.00 37.10 4.26
7222 9577 9.713740 GCTATGTTATGCTGCATTAGAAATATC 57.286 33.333 21.56 4.91 0.00 1.63
7224 9579 8.620116 TGCTATGTTATGCTGCATTAGAAATA 57.380 30.769 21.56 7.56 0.00 1.40
7228 9583 6.232692 TCATGCTATGTTATGCTGCATTAGA 58.767 36.000 21.56 10.86 41.65 2.10
7229 9584 6.490566 TCATGCTATGTTATGCTGCATTAG 57.509 37.500 21.56 16.18 41.65 1.73
7230 9585 6.880942 TTCATGCTATGTTATGCTGCATTA 57.119 33.333 21.56 9.09 41.65 1.90
7233 9588 5.777850 AATTCATGCTATGTTATGCTGCA 57.222 34.783 4.13 4.13 38.05 4.41
7234 9589 6.145048 GGAAAATTCATGCTATGTTATGCTGC 59.855 38.462 0.00 0.00 0.00 5.25
7235 9590 6.643770 GGGAAAATTCATGCTATGTTATGCTG 59.356 38.462 0.00 0.00 0.00 4.41
7237 9592 6.752168 AGGGAAAATTCATGCTATGTTATGC 58.248 36.000 0.00 0.00 0.00 3.14
7239 9594 8.537728 TTGAGGGAAAATTCATGCTATGTTAT 57.462 30.769 0.00 0.00 0.00 1.89
7241 9596 6.855763 TTGAGGGAAAATTCATGCTATGTT 57.144 33.333 0.00 0.00 0.00 2.71
7244 9599 9.822185 GTTTATTTGAGGGAAAATTCATGCTAT 57.178 29.630 0.00 0.00 32.16 2.97
7246 9601 7.678837 TGTTTATTTGAGGGAAAATTCATGCT 58.321 30.769 0.00 0.00 32.16 3.79
7247 9602 7.903995 TGTTTATTTGAGGGAAAATTCATGC 57.096 32.000 0.00 0.00 32.16 4.06
7249 9604 9.822185 GCTATGTTTATTTGAGGGAAAATTCAT 57.178 29.630 0.00 0.00 32.16 2.57
7251 9606 9.822185 ATGCTATGTTTATTTGAGGGAAAATTC 57.178 29.630 0.00 0.00 32.16 2.17
7257 9612 8.859090 CCATTTATGCTATGTTTATTTGAGGGA 58.141 33.333 0.00 0.00 0.00 4.20
7258 9613 8.641541 ACCATTTATGCTATGTTTATTTGAGGG 58.358 33.333 0.00 0.00 0.00 4.30
7267 9622 8.491134 TCCTACAGTACCATTTATGCTATGTTT 58.509 33.333 0.00 0.00 0.00 2.83
7268 9623 8.029782 TCCTACAGTACCATTTATGCTATGTT 57.970 34.615 0.00 0.00 0.00 2.71
7269 9624 7.290248 ACTCCTACAGTACCATTTATGCTATGT 59.710 37.037 0.00 0.00 31.37 2.29
7270 9625 7.600375 CACTCCTACAGTACCATTTATGCTATG 59.400 40.741 0.00 0.00 32.21 2.23
7272 9627 6.837048 TCACTCCTACAGTACCATTTATGCTA 59.163 38.462 0.00 0.00 32.21 3.49
7273 9628 5.661312 TCACTCCTACAGTACCATTTATGCT 59.339 40.000 0.00 0.00 32.21 3.79
7275 9630 7.556844 ACTTCACTCCTACAGTACCATTTATG 58.443 38.462 0.00 0.00 32.21 1.90
7276 9631 7.735326 ACTTCACTCCTACAGTACCATTTAT 57.265 36.000 0.00 0.00 32.21 1.40
7277 9632 7.549147 AACTTCACTCCTACAGTACCATTTA 57.451 36.000 0.00 0.00 32.21 1.40
7280 9635 4.158025 CGAACTTCACTCCTACAGTACCAT 59.842 45.833 0.00 0.00 32.21 3.55
7281 9636 3.504906 CGAACTTCACTCCTACAGTACCA 59.495 47.826 0.00 0.00 32.21 3.25
7282 9637 3.755378 TCGAACTTCACTCCTACAGTACC 59.245 47.826 0.00 0.00 32.21 3.34
7284 9639 6.395426 TTTTCGAACTTCACTCCTACAGTA 57.605 37.500 0.00 0.00 32.21 2.74
7285 9640 4.931661 TTTCGAACTTCACTCCTACAGT 57.068 40.909 0.00 0.00 34.67 3.55
7288 9643 9.152595 AGAAATATTTTCGAACTTCACTCCTAC 57.847 33.333 0.00 0.00 0.00 3.18
7289 9644 9.151471 CAGAAATATTTTCGAACTTCACTCCTA 57.849 33.333 0.00 0.00 0.00 2.94
7291 9646 8.029642 TCAGAAATATTTTCGAACTTCACTCC 57.970 34.615 0.00 0.00 0.00 3.85
7292 9647 9.483062 CATCAGAAATATTTTCGAACTTCACTC 57.517 33.333 0.00 0.00 0.00 3.51
7293 9648 7.965107 GCATCAGAAATATTTTCGAACTTCACT 59.035 33.333 0.00 0.00 0.00 3.41
7294 9649 7.750458 TGCATCAGAAATATTTTCGAACTTCAC 59.250 33.333 0.00 0.00 0.00 3.18
7295 9650 7.815641 TGCATCAGAAATATTTTCGAACTTCA 58.184 30.769 0.00 0.00 0.00 3.02
7298 9653 6.127925 TGCTGCATCAGAAATATTTTCGAACT 60.128 34.615 0.00 0.00 32.44 3.01
7299 9654 6.029607 TGCTGCATCAGAAATATTTTCGAAC 58.970 36.000 0.00 1.01 32.44 3.95
7311 10192 4.516323 TGCTAAGTAATGCTGCATCAGAA 58.484 39.130 16.55 0.61 32.44 3.02
7313 10194 4.514066 TCATGCTAAGTAATGCTGCATCAG 59.486 41.667 16.55 9.20 41.65 2.90
7314 10195 4.453751 TCATGCTAAGTAATGCTGCATCA 58.546 39.130 16.55 7.95 41.65 3.07
7315 10196 5.180680 TGATCATGCTAAGTAATGCTGCATC 59.819 40.000 16.55 4.31 41.65 3.91
7317 10198 4.453751 TGATCATGCTAAGTAATGCTGCA 58.546 39.130 4.13 4.13 38.05 4.41
7321 10253 5.879223 AGGCTATGATCATGCTAAGTAATGC 59.121 40.000 18.72 6.52 0.00 3.56
7322 10254 7.148289 CCAAGGCTATGATCATGCTAAGTAATG 60.148 40.741 18.72 7.58 0.00 1.90
7325 10257 5.543790 TCCAAGGCTATGATCATGCTAAGTA 59.456 40.000 18.72 0.00 0.00 2.24
7328 10260 4.980339 TCCAAGGCTATGATCATGCTAA 57.020 40.909 18.72 0.00 0.00 3.09
7331 10263 5.227908 CAAAATCCAAGGCTATGATCATGC 58.772 41.667 18.72 17.66 0.00 4.06
7387 10321 3.406764 AGACATGCTGAAGGAAAGTGTC 58.593 45.455 0.00 0.00 35.85 3.67
7388 10322 3.498774 AGACATGCTGAAGGAAAGTGT 57.501 42.857 0.00 0.00 0.00 3.55
7389 10323 4.070716 AGAAGACATGCTGAAGGAAAGTG 58.929 43.478 0.00 0.00 0.00 3.16
7390 10324 4.363991 AGAAGACATGCTGAAGGAAAGT 57.636 40.909 0.00 0.00 0.00 2.66
7391 10325 5.702349 AAAGAAGACATGCTGAAGGAAAG 57.298 39.130 0.00 0.00 0.00 2.62
7392 10326 6.096705 TCAAAAAGAAGACATGCTGAAGGAAA 59.903 34.615 0.00 0.00 0.00 3.13
7405 10482 4.668289 TCAAAAGCGGTCAAAAAGAAGAC 58.332 39.130 0.00 0.00 0.00 3.01
7425 10833 1.704628 TGTGAATCCTTCCAAGGCTCA 59.295 47.619 0.00 3.60 46.06 4.26
7437 10845 4.261031 GGCCGTATGTACAAATGTGAATCC 60.261 45.833 0.00 0.00 0.00 3.01
7440 10848 3.011119 GGGCCGTATGTACAAATGTGAA 58.989 45.455 0.00 0.00 0.00 3.18
7447 11717 1.140052 CAGATGGGGCCGTATGTACAA 59.860 52.381 0.00 0.00 0.00 2.41
7474 11744 4.883585 TGCAATTGAGTCAAAAGTGTCTCT 59.116 37.500 10.14 0.00 39.71 3.10
7475 11745 4.972440 GTGCAATTGAGTCAAAAGTGTCTC 59.028 41.667 10.14 3.51 39.52 3.36
7476 11746 4.496341 CGTGCAATTGAGTCAAAAGTGTCT 60.496 41.667 10.14 0.00 0.00 3.41
7477 11747 3.725740 CGTGCAATTGAGTCAAAAGTGTC 59.274 43.478 10.14 6.02 0.00 3.67
7478 11748 3.489059 CCGTGCAATTGAGTCAAAAGTGT 60.489 43.478 10.14 0.00 0.00 3.55
7479 11749 3.044986 CCGTGCAATTGAGTCAAAAGTG 58.955 45.455 10.14 9.56 0.00 3.16
7480 11750 2.687935 ACCGTGCAATTGAGTCAAAAGT 59.312 40.909 10.14 0.00 0.00 2.66
7481 11751 3.300009 GACCGTGCAATTGAGTCAAAAG 58.700 45.455 10.14 6.60 0.00 2.27
7482 11752 2.286713 CGACCGTGCAATTGAGTCAAAA 60.287 45.455 10.14 0.00 0.00 2.44
7483 11753 1.262950 CGACCGTGCAATTGAGTCAAA 59.737 47.619 10.14 0.00 0.00 2.69
7485 11755 0.948623 CCGACCGTGCAATTGAGTCA 60.949 55.000 10.34 0.00 0.00 3.41
7491 11761 1.671054 CCTGACCGACCGTGCAATT 60.671 57.895 0.00 0.00 0.00 2.32
7515 11786 4.754667 GTTCGGTCGGGCCAGGTC 62.755 72.222 4.39 0.00 36.97 3.85
7575 11849 0.460311 GTTGGATCGGACCAGATCGT 59.540 55.000 15.52 0.00 45.90 3.73
7591 11865 0.184933 TGGTTGGTCTCTTGGGGTTG 59.815 55.000 0.00 0.00 0.00 3.77
7604 11878 0.103390 GTTCGGGTTTGGTTGGTTGG 59.897 55.000 0.00 0.00 0.00 3.77
7614 11888 1.301479 GGCTCGTCTGTTCGGGTTT 60.301 57.895 0.00 0.00 33.45 3.27
7631 11905 3.798511 GGAGGAAGGGGAAGGCGG 61.799 72.222 0.00 0.00 0.00 6.13
7640 11914 3.157949 GGCCGAGGAGGAGGAAGG 61.158 72.222 0.00 0.00 45.00 3.46
7641 11915 3.157949 GGGCCGAGGAGGAGGAAG 61.158 72.222 0.00 0.00 45.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.