Multiple sequence alignment - TraesCS2D01G116200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G116200 chr2D 100.000 3866 0 0 1 3866 64730844 64734709 0.000000e+00 7140.0
1 TraesCS2D01G116200 chr2D 93.550 1597 79 8 1491 3063 65265930 65264334 0.000000e+00 2357.0
2 TraesCS2D01G116200 chr2D 86.975 1405 123 22 1496 2866 69148928 69150306 0.000000e+00 1526.0
3 TraesCS2D01G116200 chr2D 85.974 1098 97 22 1396 2444 68903223 68902134 0.000000e+00 1122.0
4 TraesCS2D01G116200 chr2D 91.529 425 36 0 2442 2866 68888185 68887761 1.550000e-163 586.0
5 TraesCS2D01G116200 chr2D 85.000 460 61 3 3414 3866 257162744 257163202 9.790000e-126 460.0
6 TraesCS2D01G116200 chr2D 89.644 309 22 5 3414 3713 109417992 109417685 6.060000e-103 385.0
7 TraesCS2D01G116200 chr2D 90.975 277 25 0 3590 3866 83269089 83269365 1.310000e-99 374.0
8 TraesCS2D01G116200 chr2D 79.434 389 41 17 938 1296 68903729 68903350 4.990000e-59 239.0
9 TraesCS2D01G116200 chr2D 88.889 72 6 2 3287 3357 65264674 65264604 1.910000e-13 87.9
10 TraesCS2D01G116200 chr2D 88.406 69 6 2 3287 3354 64733566 64733633 8.900000e-12 82.4
11 TraesCS2D01G116200 chr2D 88.406 69 6 2 2723 2790 64734130 64734197 8.900000e-12 82.4
12 TraesCS2D01G116200 chr2B 93.949 2578 80 15 850 3413 101072247 101074762 0.000000e+00 3827.0
13 TraesCS2D01G116200 chr2B 94.092 1591 69 7 1491 3063 101235744 101234161 0.000000e+00 2394.0
14 TraesCS2D01G116200 chr2B 85.476 1501 143 32 1396 2866 101452579 101451124 0.000000e+00 1495.0
15 TraesCS2D01G116200 chr2B 84.651 1492 145 39 1397 2866 101419635 101418206 0.000000e+00 1410.0
16 TraesCS2D01G116200 chr2B 84.316 1492 148 41 1397 2866 101433535 101432108 0.000000e+00 1380.0
17 TraesCS2D01G116200 chr2B 93.078 679 28 11 1 668 101068793 101069463 0.000000e+00 976.0
18 TraesCS2D01G116200 chr2B 96.552 145 2 2 726 868 101071823 101071966 1.800000e-58 237.0
19 TraesCS2D01G116200 chr2B 78.208 413 58 18 938 1324 101420135 101419729 6.460000e-58 235.0
20 TraesCS2D01G116200 chr2B 78.218 404 62 15 944 1324 101434029 101433629 6.460000e-58 235.0
21 TraesCS2D01G116200 chr2B 94.382 89 5 0 652 740 101069766 101069854 1.870000e-28 137.0
22 TraesCS2D01G116200 chr2B 91.667 72 4 2 3287 3357 101234500 101234430 8.840000e-17 99.0
23 TraesCS2D01G116200 chr2B 89.855 69 5 2 3287 3354 101074122 101074189 1.910000e-13 87.9
24 TraesCS2D01G116200 chr2B 97.222 36 1 0 602 637 555849430 555849395 1.160000e-05 62.1
25 TraesCS2D01G116200 chr2A 92.332 626 48 0 2241 2866 65702505 65701880 0.000000e+00 891.0
26 TraesCS2D01G116200 chr2A 83.315 893 79 29 1396 2243 65703647 65702780 0.000000e+00 760.0
27 TraesCS2D01G116200 chr2A 90.132 304 20 4 3416 3710 89473622 89473924 1.680000e-103 387.0
28 TraesCS2D01G116200 chr2A 89.137 313 25 5 3409 3713 456080086 456079775 7.840000e-102 381.0
29 TraesCS2D01G116200 chr2A 100.000 36 0 0 602 637 617439981 617439946 2.490000e-07 67.6
30 TraesCS2D01G116200 chr6D 89.686 446 37 4 3428 3866 67350960 67350517 9.380000e-156 560.0
31 TraesCS2D01G116200 chr6D 89.968 309 21 5 3414 3713 132573942 132573635 1.300000e-104 390.0
32 TraesCS2D01G116200 chr3A 88.009 467 45 6 3409 3866 138680356 138680820 3.400000e-150 542.0
33 TraesCS2D01G116200 chr3A 92.058 277 22 0 3590 3866 279493025 279493301 1.300000e-104 390.0
34 TraesCS2D01G116200 chr3A 95.833 48 2 0 593 640 729579128 729579081 1.150000e-10 78.7
35 TraesCS2D01G116200 chr3B 87.234 470 43 4 3414 3866 428419428 428419897 1.590000e-143 520.0
36 TraesCS2D01G116200 chr3D 89.524 315 23 4 3408 3713 422770935 422771248 1.300000e-104 390.0
37 TraesCS2D01G116200 chr7D 91.697 277 23 0 3590 3866 157328202 157328478 6.060000e-103 385.0
38 TraesCS2D01G116200 chr7D 89.836 305 22 6 3414 3710 223659883 223660186 2.180000e-102 383.0
39 TraesCS2D01G116200 chr7D 81.395 86 15 1 552 637 528881977 528881893 6.930000e-08 69.4
40 TraesCS2D01G116200 chr1A 91.071 280 22 2 3590 3866 352715729 352716008 3.650000e-100 375.0
41 TraesCS2D01G116200 chr4A 91.007 278 24 1 3590 3866 89204936 89205213 1.310000e-99 374.0
42 TraesCS2D01G116200 chr7A 73.139 618 109 43 64 639 731011055 731011657 6.640000e-38 169.0
43 TraesCS2D01G116200 chr5D 71.028 428 79 36 233 632 482570450 482570860 1.160000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G116200 chr2D 64730844 64734709 3865 False 2434.933333 7140 92.270667 1 3866 3 chr2D.!!$F4 3865
1 TraesCS2D01G116200 chr2D 69148928 69150306 1378 False 1526.000000 1526 86.975000 1496 2866 1 chr2D.!!$F1 1370
2 TraesCS2D01G116200 chr2D 65264334 65265930 1596 True 1222.450000 2357 91.219500 1491 3357 2 chr2D.!!$R3 1866
3 TraesCS2D01G116200 chr2D 68902134 68903729 1595 True 680.500000 1122 82.704000 938 2444 2 chr2D.!!$R4 1506
4 TraesCS2D01G116200 chr2B 101451124 101452579 1455 True 1495.000000 1495 85.476000 1396 2866 1 chr2B.!!$R1 1470
5 TraesCS2D01G116200 chr2B 101234161 101235744 1583 True 1246.500000 2394 92.879500 1491 3357 2 chr2B.!!$R3 1866
6 TraesCS2D01G116200 chr2B 101068793 101074762 5969 False 1052.980000 3827 93.563200 1 3413 5 chr2B.!!$F1 3412
7 TraesCS2D01G116200 chr2B 101418206 101420135 1929 True 822.500000 1410 81.429500 938 2866 2 chr2B.!!$R4 1928
8 TraesCS2D01G116200 chr2B 101432108 101434029 1921 True 807.500000 1380 81.267000 944 2866 2 chr2B.!!$R5 1922
9 TraesCS2D01G116200 chr2A 65701880 65703647 1767 True 825.500000 891 87.823500 1396 2866 2 chr2A.!!$R3 1470

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
815 3130 0.388520 GTGGGCTCAATTTTCGTGGC 60.389 55.0 0.0 0.0 0.00 5.01 F
1014 3639 0.388659 GCGTCATGAGATCTGGAGCT 59.611 55.0 0.0 0.0 0.00 4.09 F
1251 3895 0.696143 TTGGTGGTCAGGGAGGAACA 60.696 55.0 0.0 0.0 30.52 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2684 5757 0.390735 GCAAGCTTTGGGCATGAAGG 60.391 55.000 0.00 0.0 41.57 3.46 R
2732 5805 1.909302 CCACCTTAGGGTCACTGTCAT 59.091 52.381 2.32 0.0 45.41 3.06 R
3113 6186 0.386985 GAAGCAGCAAGAGCAACAGC 60.387 55.000 0.00 0.0 45.49 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
240 244 7.433708 AAGAAACAAAGGGAACAACAAAAAG 57.566 32.000 0.00 0.00 0.00 2.27
241 245 5.937540 AGAAACAAAGGGAACAACAAAAAGG 59.062 36.000 0.00 0.00 0.00 3.11
311 317 9.377312 CAGTGAAAACCAATAAAGAAAGGAAAA 57.623 29.630 0.00 0.00 0.00 2.29
357 363 9.546428 AACGAAAATCAAAGGAAAATGAGAAAT 57.454 25.926 0.00 0.00 0.00 2.17
418 424 8.522830 AGAAACTGATGAAACACAAAAGAAGAA 58.477 29.630 0.00 0.00 0.00 2.52
420 426 9.657419 AAACTGATGAAACACAAAAGAAGAAAT 57.343 25.926 0.00 0.00 0.00 2.17
435 441 9.936759 AAAAGAAGAAATCCAAAGTAAAACACA 57.063 25.926 0.00 0.00 0.00 3.72
436 442 9.936759 AAAGAAGAAATCCAAAGTAAAACACAA 57.063 25.926 0.00 0.00 0.00 3.33
437 443 9.936759 AAGAAGAAATCCAAAGTAAAACACAAA 57.063 25.926 0.00 0.00 0.00 2.83
438 444 9.936759 AGAAGAAATCCAAAGTAAAACACAAAA 57.063 25.926 0.00 0.00 0.00 2.44
582 594 2.715005 GCGTGTGCACAGCAGAAA 59.285 55.556 22.40 0.00 40.08 2.52
634 646 4.264145 GCTATAAGCGAGACATAGCATTCG 59.736 45.833 7.71 0.00 44.23 3.34
661 673 1.568612 CGGCTAGTGGTGTGCAGTTG 61.569 60.000 0.00 0.00 0.00 3.16
672 1002 4.099113 TGGTGTGCAGTTGAATTTTGATGA 59.901 37.500 0.00 0.00 0.00 2.92
674 1004 5.346822 GGTGTGCAGTTGAATTTTGATGATC 59.653 40.000 0.00 0.00 0.00 2.92
714 1044 3.114668 TCACGTTTCCAAAATCCGAGA 57.885 42.857 0.00 0.00 0.00 4.04
804 3119 2.682494 GTCCGGTAGGTGGGCTCA 60.682 66.667 0.00 0.00 39.05 4.26
815 3130 0.388520 GTGGGCTCAATTTTCGTGGC 60.389 55.000 0.00 0.00 0.00 5.01
875 3488 0.951558 GCTGTGATCCGTGTTTGGTT 59.048 50.000 0.00 0.00 0.00 3.67
997 3620 1.674611 GCCGTAATCCATCGATCGCG 61.675 60.000 11.09 0.00 39.35 5.87
1000 3623 1.662026 CGTAATCCATCGATCGCGTCA 60.662 52.381 11.09 0.00 38.98 4.35
1013 3638 0.938637 CGCGTCATGAGATCTGGAGC 60.939 60.000 0.00 0.00 0.00 4.70
1014 3639 0.388659 GCGTCATGAGATCTGGAGCT 59.611 55.000 0.00 0.00 0.00 4.09
1022 3647 2.562738 TGAGATCTGGAGCTGACGAAAA 59.437 45.455 0.00 0.00 0.00 2.29
1047 3679 4.582656 CCTAACACTGAGATGGAGAGTAGG 59.417 50.000 0.00 0.00 0.00 3.18
1101 3733 2.032634 GTCCAATCGAGTTGCGCCA 61.033 57.895 4.18 0.00 40.61 5.69
1251 3895 0.696143 TTGGTGGTCAGGGAGGAACA 60.696 55.000 0.00 0.00 30.52 3.18
1260 3904 2.185867 GGAGGAACACGCGGCATA 59.814 61.111 12.47 0.00 0.00 3.14
1315 3962 3.084786 GAGTTCACAAAGATGGAAGGGG 58.915 50.000 0.00 0.00 0.00 4.79
1386 4033 1.610102 CCCCATGAGAATGAGATCCGC 60.610 57.143 0.00 0.00 0.00 5.54
1455 4156 1.276859 TGGATGAGCAGCAGGTCCAT 61.277 55.000 5.81 0.00 41.53 3.41
1614 4324 1.627297 GGGAATCGAACTGGGGAGCT 61.627 60.000 0.00 0.00 0.00 4.09
1733 4479 8.918202 TTCTGTAACACATGGACTTCTATTTT 57.082 30.769 0.00 0.00 0.00 1.82
1749 4495 1.731720 TTTTGTTGGTGTTTGCAGCC 58.268 45.000 0.00 0.00 42.04 4.85
1801 4547 2.989639 CTGGATGCGACCCAGGAA 59.010 61.111 10.08 0.00 45.66 3.36
2054 4849 2.642139 CACATGTGGTGCCATTCTTC 57.358 50.000 18.51 0.00 41.36 2.87
2288 5361 9.920133 GTCTCAAGATATAGCATTGATTAGTGA 57.080 33.333 0.00 0.00 32.82 3.41
2464 5537 1.078848 GCTTGCCTCTCACCATCGT 60.079 57.895 0.00 0.00 0.00 3.73
2547 5620 1.154150 GATGCTTGCTTCACGTGGC 60.154 57.895 17.00 12.84 0.00 5.01
2643 5716 3.441572 GCCTGAATGTTGTCATACAAGCT 59.558 43.478 0.00 0.00 39.00 3.74
2732 5805 4.008074 GTCAGGAGACATGTTTCTTGGA 57.992 45.455 22.97 12.63 44.34 3.53
2936 6009 7.690454 TCCTCTATTTTTATCCATCTGGTCA 57.310 36.000 0.00 0.00 36.34 4.02
3097 6170 3.503827 TCAGCTACCTGATAACGTGTG 57.496 47.619 0.00 0.00 42.98 3.82
3098 6171 1.927174 CAGCTACCTGATAACGTGTGC 59.073 52.381 0.00 0.00 41.77 4.57
3099 6172 1.548719 AGCTACCTGATAACGTGTGCA 59.451 47.619 0.00 0.00 0.00 4.57
3100 6173 1.659098 GCTACCTGATAACGTGTGCAC 59.341 52.381 10.75 10.75 0.00 4.57
3101 6174 2.929161 GCTACCTGATAACGTGTGCACA 60.929 50.000 17.42 17.42 0.00 4.57
3102 6175 2.472695 ACCTGATAACGTGTGCACAT 57.527 45.000 24.69 9.98 0.00 3.21
3103 6176 3.603158 ACCTGATAACGTGTGCACATA 57.397 42.857 24.69 12.14 0.00 2.29
3104 6177 3.521560 ACCTGATAACGTGTGCACATAG 58.478 45.455 24.69 21.57 0.00 2.23
3105 6178 2.866156 CCTGATAACGTGTGCACATAGG 59.134 50.000 24.69 17.33 0.00 2.57
3106 6179 3.521560 CTGATAACGTGTGCACATAGGT 58.478 45.455 24.69 20.59 0.00 3.08
3107 6180 3.932710 CTGATAACGTGTGCACATAGGTT 59.067 43.478 24.69 25.70 35.36 3.50
3108 6181 3.682377 TGATAACGTGTGCACATAGGTTG 59.318 43.478 28.87 17.00 33.68 3.77
3109 6182 2.248280 AACGTGTGCACATAGGTTGA 57.752 45.000 24.69 0.00 31.16 3.18
3110 6183 2.472695 ACGTGTGCACATAGGTTGAT 57.527 45.000 24.69 1.33 0.00 2.57
3111 6184 2.778299 ACGTGTGCACATAGGTTGATT 58.222 42.857 24.69 0.61 0.00 2.57
3112 6185 2.483877 ACGTGTGCACATAGGTTGATTG 59.516 45.455 24.69 5.58 0.00 2.67
3113 6186 2.159531 CGTGTGCACATAGGTTGATTGG 60.160 50.000 24.69 0.00 0.00 3.16
3114 6187 1.818060 TGTGCACATAGGTTGATTGGC 59.182 47.619 17.42 0.00 0.00 4.52
3115 6188 2.094675 GTGCACATAGGTTGATTGGCT 58.905 47.619 13.17 0.00 0.00 4.75
3173 6247 7.817962 TCGTTTTTCCTTTTGTTTAATGAACCA 59.182 29.630 0.00 0.00 37.45 3.67
3186 6260 7.505585 TGTTTAATGAACCATTCTTCCTTGTCT 59.494 33.333 0.00 0.00 37.45 3.41
3231 6307 1.737793 CCTCGTGGTTTCAATGTAGGC 59.262 52.381 0.00 0.00 0.00 3.93
3237 6313 5.047164 TCGTGGTTTCAATGTAGGCTAAGTA 60.047 40.000 0.00 0.00 0.00 2.24
3238 6314 5.291128 CGTGGTTTCAATGTAGGCTAAGTAG 59.709 44.000 0.00 0.00 0.00 2.57
3239 6315 5.585047 GTGGTTTCAATGTAGGCTAAGTAGG 59.415 44.000 0.00 0.00 0.00 3.18
3240 6316 5.249852 TGGTTTCAATGTAGGCTAAGTAGGT 59.750 40.000 0.00 0.00 0.00 3.08
3241 6317 5.816258 GGTTTCAATGTAGGCTAAGTAGGTC 59.184 44.000 0.00 0.00 0.00 3.85
3242 6318 6.403878 GTTTCAATGTAGGCTAAGTAGGTCA 58.596 40.000 0.00 0.00 0.00 4.02
3243 6319 6.808321 TTCAATGTAGGCTAAGTAGGTCAT 57.192 37.500 0.00 0.00 0.00 3.06
3244 6320 7.907841 TTCAATGTAGGCTAAGTAGGTCATA 57.092 36.000 0.00 0.00 0.00 2.15
3245 6321 8.492415 TTCAATGTAGGCTAAGTAGGTCATAT 57.508 34.615 0.00 0.00 0.00 1.78
3246 6322 8.492415 TCAATGTAGGCTAAGTAGGTCATATT 57.508 34.615 0.00 0.00 0.00 1.28
3247 6323 8.367911 TCAATGTAGGCTAAGTAGGTCATATTG 58.632 37.037 0.00 0.00 0.00 1.90
3248 6324 7.857404 ATGTAGGCTAAGTAGGTCATATTGT 57.143 36.000 0.00 0.00 0.00 2.71
3249 6325 7.050970 TGTAGGCTAAGTAGGTCATATTGTG 57.949 40.000 0.00 0.00 0.00 3.33
3250 6326 6.837048 TGTAGGCTAAGTAGGTCATATTGTGA 59.163 38.462 0.00 0.00 0.00 3.58
3283 6359 0.938008 GGCTTGGAAGTAGCGTATGC 59.062 55.000 0.00 0.00 39.54 3.14
3346 6423 3.299340 TTACTGTCGCTTGGTCTCTTC 57.701 47.619 0.00 0.00 0.00 2.87
3347 6424 1.333177 ACTGTCGCTTGGTCTCTTCT 58.667 50.000 0.00 0.00 0.00 2.85
3348 6425 1.689273 ACTGTCGCTTGGTCTCTTCTT 59.311 47.619 0.00 0.00 0.00 2.52
3419 6497 9.578576 TTAGATATAACCGTTACATCCACTAGT 57.421 33.333 6.02 0.00 0.00 2.57
3421 6499 9.007901 AGATATAACCGTTACATCCACTAGTAC 57.992 37.037 6.02 0.00 0.00 2.73
3422 6500 4.361451 AACCGTTACATCCACTAGTACG 57.639 45.455 0.00 0.00 0.00 3.67
3423 6501 2.098117 ACCGTTACATCCACTAGTACGC 59.902 50.000 6.58 0.00 0.00 4.42
3424 6502 2.369600 CGTTACATCCACTAGTACGCG 58.630 52.381 3.53 3.53 0.00 6.01
3425 6503 2.223112 CGTTACATCCACTAGTACGCGT 60.223 50.000 19.17 19.17 0.00 6.01
3426 6504 3.728864 CGTTACATCCACTAGTACGCGTT 60.729 47.826 20.78 1.73 0.00 4.84
3427 6505 2.273370 ACATCCACTAGTACGCGTTG 57.727 50.000 20.78 9.34 0.00 4.10
3428 6506 1.135199 ACATCCACTAGTACGCGTTGG 60.135 52.381 20.78 19.49 0.00 3.77
3429 6507 1.135199 CATCCACTAGTACGCGTTGGT 60.135 52.381 20.78 5.38 0.00 3.67
3430 6508 0.241749 TCCACTAGTACGCGTTGGTG 59.758 55.000 20.78 18.71 0.00 4.17
3431 6509 1.349259 CCACTAGTACGCGTTGGTGC 61.349 60.000 20.78 3.04 0.00 5.01
3432 6510 0.388134 CACTAGTACGCGTTGGTGCT 60.388 55.000 20.78 10.88 36.76 4.40
3433 6511 1.135603 CACTAGTACGCGTTGGTGCTA 60.136 52.381 20.78 11.45 34.58 3.49
3434 6512 1.747355 ACTAGTACGCGTTGGTGCTAT 59.253 47.619 20.78 0.00 35.13 2.97
3435 6513 2.945008 ACTAGTACGCGTTGGTGCTATA 59.055 45.455 20.78 0.00 35.13 1.31
3436 6514 2.199291 AGTACGCGTTGGTGCTATAC 57.801 50.000 20.78 5.89 30.73 1.47
3437 6515 1.473677 AGTACGCGTTGGTGCTATACA 59.526 47.619 20.78 0.00 30.73 2.29
3438 6516 2.094597 AGTACGCGTTGGTGCTATACAA 60.095 45.455 20.78 0.00 30.73 2.41
3439 6517 1.798283 ACGCGTTGGTGCTATACAAA 58.202 45.000 5.58 0.00 0.00 2.83
3440 6518 1.461897 ACGCGTTGGTGCTATACAAAC 59.538 47.619 5.58 0.00 39.42 2.93
3445 6523 4.492791 GTTGGTGCTATACAAACGGTTT 57.507 40.909 0.00 0.00 33.73 3.27
3446 6524 4.862350 GTTGGTGCTATACAAACGGTTTT 58.138 39.130 2.79 0.00 33.73 2.43
3447 6525 5.283294 GTTGGTGCTATACAAACGGTTTTT 58.717 37.500 2.79 0.00 33.73 1.94
3448 6526 6.437094 GTTGGTGCTATACAAACGGTTTTTA 58.563 36.000 2.79 2.51 33.73 1.52
3449 6527 6.630444 TGGTGCTATACAAACGGTTTTTAA 57.370 33.333 2.79 0.00 0.00 1.52
3450 6528 6.437094 TGGTGCTATACAAACGGTTTTTAAC 58.563 36.000 2.79 0.00 0.00 2.01
3461 6539 3.374220 GGTTTTTAACCCCTTTCCGTG 57.626 47.619 0.00 0.00 46.12 4.94
3462 6540 2.957680 GGTTTTTAACCCCTTTCCGTGA 59.042 45.455 0.00 0.00 46.12 4.35
3463 6541 3.243501 GGTTTTTAACCCCTTTCCGTGAC 60.244 47.826 0.00 0.00 46.12 3.67
3464 6542 1.881591 TTTAACCCCTTTCCGTGACG 58.118 50.000 0.00 0.00 0.00 4.35
3475 6553 3.086161 CCGTGACGGCATTTGAAAC 57.914 52.632 12.53 0.00 41.17 2.78
3476 6554 0.386731 CCGTGACGGCATTTGAAACC 60.387 55.000 12.53 0.00 41.17 3.27
3480 6558 4.433102 CGGCATTTGAAACCGTCG 57.567 55.556 0.00 0.00 42.01 5.12
3481 6559 1.795962 CGGCATTTGAAACCGTCGC 60.796 57.895 0.00 0.00 42.01 5.19
3482 6560 1.443702 GGCATTTGAAACCGTCGCC 60.444 57.895 0.00 0.00 0.00 5.54
3483 6561 1.284408 GCATTTGAAACCGTCGCCA 59.716 52.632 0.00 0.00 0.00 5.69
3484 6562 0.318275 GCATTTGAAACCGTCGCCAA 60.318 50.000 0.00 0.00 0.00 4.52
3485 6563 1.685302 CATTTGAAACCGTCGCCAAG 58.315 50.000 0.00 0.00 0.00 3.61
3486 6564 1.001815 CATTTGAAACCGTCGCCAAGT 60.002 47.619 0.00 0.00 0.00 3.16
3487 6565 0.378962 TTTGAAACCGTCGCCAAGTG 59.621 50.000 0.00 0.00 0.00 3.16
3488 6566 0.462225 TTGAAACCGTCGCCAAGTGA 60.462 50.000 0.00 0.00 0.00 3.41
3489 6567 0.878523 TGAAACCGTCGCCAAGTGAG 60.879 55.000 0.00 0.00 0.00 3.51
3490 6568 0.878961 GAAACCGTCGCCAAGTGAGT 60.879 55.000 0.00 0.00 0.00 3.41
3491 6569 1.157870 AAACCGTCGCCAAGTGAGTG 61.158 55.000 0.00 0.00 0.00 3.51
3492 6570 2.023414 AACCGTCGCCAAGTGAGTGA 62.023 55.000 0.00 0.00 0.00 3.41
3493 6571 1.734477 CCGTCGCCAAGTGAGTGAG 60.734 63.158 0.00 0.00 0.00 3.51
3494 6572 1.007271 CGTCGCCAAGTGAGTGAGT 60.007 57.895 0.00 0.00 0.00 3.41
3495 6573 1.278172 CGTCGCCAAGTGAGTGAGTG 61.278 60.000 0.00 0.00 0.00 3.51
3496 6574 0.249489 GTCGCCAAGTGAGTGAGTGT 60.249 55.000 0.00 0.00 0.00 3.55
3497 6575 0.249447 TCGCCAAGTGAGTGAGTGTG 60.249 55.000 0.00 0.00 0.00 3.82
3498 6576 0.249447 CGCCAAGTGAGTGAGTGTGA 60.249 55.000 0.00 0.00 0.00 3.58
3499 6577 1.506493 GCCAAGTGAGTGAGTGTGAG 58.494 55.000 0.00 0.00 0.00 3.51
3500 6578 1.875576 GCCAAGTGAGTGAGTGTGAGG 60.876 57.143 0.00 0.00 0.00 3.86
3501 6579 1.270518 CCAAGTGAGTGAGTGTGAGGG 60.271 57.143 0.00 0.00 0.00 4.30
3502 6580 1.051812 AAGTGAGTGAGTGTGAGGGG 58.948 55.000 0.00 0.00 0.00 4.79
3503 6581 0.833834 AGTGAGTGAGTGTGAGGGGG 60.834 60.000 0.00 0.00 0.00 5.40
3520 6598 2.346365 GGTCCTTCCCACACGACC 59.654 66.667 0.00 0.00 38.18 4.79
3521 6599 2.346365 GTCCTTCCCACACGACCC 59.654 66.667 0.00 0.00 0.00 4.46
3522 6600 2.122769 TCCTTCCCACACGACCCA 60.123 61.111 0.00 0.00 0.00 4.51
3523 6601 2.214216 TCCTTCCCACACGACCCAG 61.214 63.158 0.00 0.00 0.00 4.45
3524 6602 2.214216 CCTTCCCACACGACCCAGA 61.214 63.158 0.00 0.00 0.00 3.86
3525 6603 1.752198 CTTCCCACACGACCCAGAA 59.248 57.895 0.00 0.00 0.00 3.02
3526 6604 0.107831 CTTCCCACACGACCCAGAAA 59.892 55.000 0.00 0.00 0.00 2.52
3527 6605 0.768622 TTCCCACACGACCCAGAAAT 59.231 50.000 0.00 0.00 0.00 2.17
3528 6606 0.323629 TCCCACACGACCCAGAAATC 59.676 55.000 0.00 0.00 0.00 2.17
3529 6607 0.036164 CCCACACGACCCAGAAATCA 59.964 55.000 0.00 0.00 0.00 2.57
3530 6608 1.340017 CCCACACGACCCAGAAATCAT 60.340 52.381 0.00 0.00 0.00 2.45
3531 6609 2.009774 CCACACGACCCAGAAATCATC 58.990 52.381 0.00 0.00 0.00 2.92
3532 6610 1.660607 CACACGACCCAGAAATCATCG 59.339 52.381 0.00 0.00 38.71 3.84
3533 6611 1.290203 CACGACCCAGAAATCATCGG 58.710 55.000 0.00 0.00 37.11 4.18
3534 6612 0.178068 ACGACCCAGAAATCATCGGG 59.822 55.000 0.00 0.00 43.41 5.14
3540 6618 3.340814 CCAGAAATCATCGGGGATAGG 57.659 52.381 0.00 0.00 39.50 2.57
3541 6619 2.616510 CCAGAAATCATCGGGGATAGGC 60.617 54.545 0.00 0.00 39.50 3.93
3542 6620 1.630878 AGAAATCATCGGGGATAGGCC 59.369 52.381 0.00 0.00 0.00 5.19
3543 6621 1.630878 GAAATCATCGGGGATAGGCCT 59.369 52.381 11.78 11.78 36.66 5.19
3544 6622 1.747444 AATCATCGGGGATAGGCCTT 58.253 50.000 12.58 0.00 36.66 4.35
3545 6623 1.280457 ATCATCGGGGATAGGCCTTC 58.720 55.000 12.58 8.59 36.66 3.46
3546 6624 0.836400 TCATCGGGGATAGGCCTTCC 60.836 60.000 12.58 17.62 36.66 3.46
3550 6628 3.472809 GGGATAGGCCTTCCCGAG 58.527 66.667 27.22 0.00 43.38 4.63
3551 6629 1.152312 GGGATAGGCCTTCCCGAGA 60.152 63.158 27.22 4.55 43.38 4.04
3552 6630 1.473497 GGGATAGGCCTTCCCGAGAC 61.473 65.000 27.22 11.95 43.38 3.36
3553 6631 0.759436 GGATAGGCCTTCCCGAGACA 60.759 60.000 12.58 0.00 39.21 3.41
3554 6632 0.389757 GATAGGCCTTCCCGAGACAC 59.610 60.000 12.58 0.00 39.21 3.67
3555 6633 0.325296 ATAGGCCTTCCCGAGACACA 60.325 55.000 12.58 0.00 39.21 3.72
3556 6634 0.325296 TAGGCCTTCCCGAGACACAT 60.325 55.000 12.58 0.00 39.21 3.21
3557 6635 1.450312 GGCCTTCCCGAGACACATG 60.450 63.158 0.00 0.00 0.00 3.21
3558 6636 2.109126 GCCTTCCCGAGACACATGC 61.109 63.158 0.00 0.00 0.00 4.06
3559 6637 1.599047 CCTTCCCGAGACACATGCT 59.401 57.895 0.00 0.00 0.00 3.79
3560 6638 0.742281 CCTTCCCGAGACACATGCTG 60.742 60.000 0.00 0.00 0.00 4.41
3561 6639 0.742281 CTTCCCGAGACACATGCTGG 60.742 60.000 0.00 0.00 0.00 4.85
3562 6640 2.124983 CCCGAGACACATGCTGGG 60.125 66.667 0.00 0.00 0.00 4.45
3563 6641 2.124983 CCGAGACACATGCTGGGG 60.125 66.667 0.00 0.00 0.00 4.96
3564 6642 2.821366 CGAGACACATGCTGGGGC 60.821 66.667 0.00 0.00 39.26 5.80
3565 6643 2.439156 GAGACACATGCTGGGGCC 60.439 66.667 0.00 0.00 37.74 5.80
3566 6644 4.415150 AGACACATGCTGGGGCCG 62.415 66.667 0.00 0.00 37.74 6.13
3567 6645 4.722700 GACACATGCTGGGGCCGT 62.723 66.667 0.00 0.00 37.74 5.68
3583 6661 4.221422 GTGCGGGCGAGGCATAGA 62.221 66.667 0.00 0.00 43.19 1.98
3584 6662 3.466314 TGCGGGCGAGGCATAGAA 61.466 61.111 0.00 0.00 35.04 2.10
3585 6663 2.203015 GCGGGCGAGGCATAGAAA 60.203 61.111 0.00 0.00 0.00 2.52
3586 6664 2.534903 GCGGGCGAGGCATAGAAAC 61.535 63.158 0.00 0.00 0.00 2.78
3587 6665 1.887707 CGGGCGAGGCATAGAAACC 60.888 63.158 0.00 0.00 0.00 3.27
3588 6666 1.526225 GGGCGAGGCATAGAAACCC 60.526 63.158 0.00 0.00 0.00 4.11
3589 6667 1.223487 GGCGAGGCATAGAAACCCA 59.777 57.895 0.00 0.00 0.00 4.51
3590 6668 0.393808 GGCGAGGCATAGAAACCCAA 60.394 55.000 0.00 0.00 0.00 4.12
3591 6669 1.680338 GCGAGGCATAGAAACCCAAT 58.320 50.000 0.00 0.00 0.00 3.16
3592 6670 1.604278 GCGAGGCATAGAAACCCAATC 59.396 52.381 0.00 0.00 0.00 2.67
3593 6671 2.917933 CGAGGCATAGAAACCCAATCA 58.082 47.619 0.00 0.00 0.00 2.57
3594 6672 3.480470 CGAGGCATAGAAACCCAATCAT 58.520 45.455 0.00 0.00 0.00 2.45
3595 6673 3.885297 CGAGGCATAGAAACCCAATCATT 59.115 43.478 0.00 0.00 0.00 2.57
3596 6674 4.339247 CGAGGCATAGAAACCCAATCATTT 59.661 41.667 0.00 0.00 0.00 2.32
3597 6675 5.506317 CGAGGCATAGAAACCCAATCATTTC 60.506 44.000 0.00 0.00 35.46 2.17
3598 6676 4.651045 AGGCATAGAAACCCAATCATTTCC 59.349 41.667 0.00 0.00 35.77 3.13
3599 6677 4.499696 GGCATAGAAACCCAATCATTTCCG 60.500 45.833 0.00 0.00 35.77 4.30
3600 6678 4.097892 GCATAGAAACCCAATCATTTCCGT 59.902 41.667 0.00 0.00 35.77 4.69
3601 6679 5.298276 GCATAGAAACCCAATCATTTCCGTA 59.702 40.000 0.00 0.00 35.77 4.02
3602 6680 6.513393 GCATAGAAACCCAATCATTTCCGTAG 60.513 42.308 0.00 0.00 35.77 3.51
3619 6697 3.973657 CGTAGGTATGTACATCCCACAC 58.026 50.000 18.71 14.08 0.00 3.82
3620 6698 3.549423 CGTAGGTATGTACATCCCACACG 60.549 52.174 21.61 21.61 0.00 4.49
3621 6699 1.760613 AGGTATGTACATCCCACACGG 59.239 52.381 18.71 0.00 0.00 4.94
3622 6700 1.483415 GGTATGTACATCCCACACGGT 59.517 52.381 12.68 0.00 0.00 4.83
3623 6701 2.546778 GTATGTACATCCCACACGGTG 58.453 52.381 12.68 6.58 0.00 4.94
3624 6702 1.271856 ATGTACATCCCACACGGTGA 58.728 50.000 16.29 0.00 35.23 4.02
3625 6703 1.049402 TGTACATCCCACACGGTGAA 58.951 50.000 16.29 0.00 35.23 3.18
3626 6704 1.626321 TGTACATCCCACACGGTGAAT 59.374 47.619 16.29 0.00 35.23 2.57
3627 6705 2.277084 GTACATCCCACACGGTGAATC 58.723 52.381 16.29 0.00 35.23 2.52
3628 6706 0.035439 ACATCCCACACGGTGAATCC 60.035 55.000 16.29 0.00 35.23 3.01
3629 6707 0.748005 CATCCCACACGGTGAATCCC 60.748 60.000 16.29 0.00 35.23 3.85
3630 6708 1.204786 ATCCCACACGGTGAATCCCA 61.205 55.000 16.29 0.00 35.23 4.37
3631 6709 1.377202 CCCACACGGTGAATCCCAG 60.377 63.158 16.29 0.00 35.23 4.45
3632 6710 1.676968 CCACACGGTGAATCCCAGA 59.323 57.895 16.29 0.00 35.23 3.86
3633 6711 0.036164 CCACACGGTGAATCCCAGAA 59.964 55.000 16.29 0.00 35.23 3.02
3634 6712 1.544537 CCACACGGTGAATCCCAGAAA 60.545 52.381 16.29 0.00 35.23 2.52
3635 6713 2.226330 CACACGGTGAATCCCAGAAAA 58.774 47.619 16.29 0.00 35.23 2.29
3636 6714 2.621055 CACACGGTGAATCCCAGAAAAA 59.379 45.455 16.29 0.00 35.23 1.94
3637 6715 3.255642 CACACGGTGAATCCCAGAAAAAT 59.744 43.478 16.29 0.00 35.23 1.82
3638 6716 4.457603 CACACGGTGAATCCCAGAAAAATA 59.542 41.667 16.29 0.00 35.23 1.40
3639 6717 5.125417 CACACGGTGAATCCCAGAAAAATAT 59.875 40.000 16.29 0.00 35.23 1.28
3640 6718 5.714806 ACACGGTGAATCCCAGAAAAATATT 59.285 36.000 16.29 0.00 0.00 1.28
3641 6719 6.210584 ACACGGTGAATCCCAGAAAAATATTT 59.789 34.615 16.29 0.00 0.00 1.40
3642 6720 7.096551 CACGGTGAATCCCAGAAAAATATTTT 58.903 34.615 7.64 7.64 0.00 1.82
3643 6721 7.275560 CACGGTGAATCCCAGAAAAATATTTTC 59.724 37.037 13.68 7.34 0.00 2.29
3644 6722 6.472163 CGGTGAATCCCAGAAAAATATTTTCG 59.528 38.462 13.68 4.96 33.86 3.46
3645 6723 7.320399 GGTGAATCCCAGAAAAATATTTTCGT 58.680 34.615 13.68 0.00 33.86 3.85
3646 6724 8.463607 GGTGAATCCCAGAAAAATATTTTCGTA 58.536 33.333 13.68 0.00 33.86 3.43
3647 6725 9.503427 GTGAATCCCAGAAAAATATTTTCGTAG 57.497 33.333 13.68 5.11 33.86 3.51
3648 6726 8.682710 TGAATCCCAGAAAAATATTTTCGTAGG 58.317 33.333 13.68 12.18 33.86 3.18
3649 6727 8.589701 AATCCCAGAAAAATATTTTCGTAGGT 57.410 30.769 13.68 0.00 33.86 3.08
3650 6728 9.689501 AATCCCAGAAAAATATTTTCGTAGGTA 57.310 29.630 13.68 2.50 33.86 3.08
3651 6729 9.862149 ATCCCAGAAAAATATTTTCGTAGGTAT 57.138 29.630 13.68 4.47 33.86 2.73
3652 6730 9.116067 TCCCAGAAAAATATTTTCGTAGGTATG 57.884 33.333 13.68 5.07 33.86 2.39
3653 6731 8.899771 CCCAGAAAAATATTTTCGTAGGTATGT 58.100 33.333 13.68 0.00 33.86 2.29
3660 6738 9.498176 AAATATTTTCGTAGGTATGTACATCCC 57.502 33.333 12.68 10.89 0.00 3.85
3661 6739 5.936187 TTTTCGTAGGTATGTACATCCCA 57.064 39.130 18.71 4.63 0.00 4.37
3662 6740 4.924305 TTCGTAGGTATGTACATCCCAC 57.076 45.455 18.71 14.00 0.00 4.61
3663 6741 3.900971 TCGTAGGTATGTACATCCCACA 58.099 45.455 18.71 4.22 0.00 4.17
3664 6742 3.633525 TCGTAGGTATGTACATCCCACAC 59.366 47.826 18.71 14.08 0.00 3.82
3665 6743 3.549423 CGTAGGTATGTACATCCCACACG 60.549 52.174 21.61 21.61 0.00 4.49
3666 6744 1.760613 AGGTATGTACATCCCACACGG 59.239 52.381 18.71 0.00 0.00 4.94
3667 6745 1.483415 GGTATGTACATCCCACACGGT 59.517 52.381 12.68 0.00 0.00 4.83
3668 6746 2.546778 GTATGTACATCCCACACGGTG 58.453 52.381 12.68 6.58 0.00 4.94
3669 6747 1.271856 ATGTACATCCCACACGGTGA 58.728 50.000 16.29 0.00 35.23 4.02
3670 6748 1.049402 TGTACATCCCACACGGTGAA 58.951 50.000 16.29 0.00 35.23 3.18
3671 6749 1.626321 TGTACATCCCACACGGTGAAT 59.374 47.619 16.29 0.00 35.23 2.57
3672 6750 2.277084 GTACATCCCACACGGTGAATC 58.723 52.381 16.29 0.00 35.23 2.52
3673 6751 0.035439 ACATCCCACACGGTGAATCC 60.035 55.000 16.29 0.00 35.23 3.01
3674 6752 0.035534 CATCCCACACGGTGAATCCA 60.036 55.000 16.29 0.00 35.23 3.41
3675 6753 0.253044 ATCCCACACGGTGAATCCAG 59.747 55.000 16.29 0.00 35.23 3.86
3676 6754 0.834261 TCCCACACGGTGAATCCAGA 60.834 55.000 16.29 0.00 35.23 3.86
3677 6755 0.391661 CCCACACGGTGAATCCAGAG 60.392 60.000 16.29 0.00 35.23 3.35
3678 6756 0.608130 CCACACGGTGAATCCAGAGA 59.392 55.000 16.29 0.00 35.23 3.10
3679 6757 1.001974 CCACACGGTGAATCCAGAGAA 59.998 52.381 16.29 0.00 35.23 2.87
3680 6758 2.549992 CCACACGGTGAATCCAGAGAAA 60.550 50.000 16.29 0.00 35.23 2.52
3681 6759 3.138304 CACACGGTGAATCCAGAGAAAA 58.862 45.455 16.29 0.00 35.23 2.29
3682 6760 3.058914 CACACGGTGAATCCAGAGAAAAC 60.059 47.826 16.29 0.00 35.23 2.43
3683 6761 2.157668 CACGGTGAATCCAGAGAAAACG 59.842 50.000 0.74 0.00 35.57 3.60
3684 6762 2.224209 ACGGTGAATCCAGAGAAAACGT 60.224 45.455 0.00 0.00 35.57 3.99
3685 6763 2.806244 CGGTGAATCCAGAGAAAACGTT 59.194 45.455 0.00 0.00 35.57 3.99
3686 6764 3.250040 CGGTGAATCCAGAGAAAACGTTT 59.750 43.478 7.96 7.96 35.57 3.60
3687 6765 4.610680 CGGTGAATCCAGAGAAAACGTTTC 60.611 45.833 15.01 8.08 35.57 2.78
3688 6766 4.320275 GGTGAATCCAGAGAAAACGTTTCC 60.320 45.833 15.01 0.14 35.97 3.13
3689 6767 3.496884 TGAATCCAGAGAAAACGTTTCCG 59.503 43.478 15.01 1.40 40.83 4.30
3704 6782 4.889241 CGTTTCCGTTTGTATGTACATCC 58.111 43.478 12.68 0.56 35.89 3.51
3705 6783 4.201744 CGTTTCCGTTTGTATGTACATCCC 60.202 45.833 12.68 5.07 35.89 3.85
3706 6784 4.554960 TTCCGTTTGTATGTACATCCCA 57.445 40.909 12.68 7.82 35.89 4.37
3707 6785 3.864243 TCCGTTTGTATGTACATCCCAC 58.136 45.455 12.68 5.95 35.89 4.61
3708 6786 3.261137 TCCGTTTGTATGTACATCCCACA 59.739 43.478 12.68 8.76 35.89 4.17
3709 6787 3.372822 CCGTTTGTATGTACATCCCACAC 59.627 47.826 12.68 12.10 35.89 3.82
3710 6788 3.997681 CGTTTGTATGTACATCCCACACA 59.002 43.478 12.68 7.98 35.89 3.72
3711 6789 4.092821 CGTTTGTATGTACATCCCACACAG 59.907 45.833 12.68 6.83 35.89 3.66
3712 6790 4.901197 TTGTATGTACATCCCACACAGT 57.099 40.909 12.68 0.00 35.89 3.55
3713 6791 4.901197 TGTATGTACATCCCACACAGTT 57.099 40.909 12.68 0.00 0.00 3.16
3714 6792 5.235850 TGTATGTACATCCCACACAGTTT 57.764 39.130 12.68 0.00 0.00 2.66
3715 6793 5.626142 TGTATGTACATCCCACACAGTTTT 58.374 37.500 12.68 0.00 0.00 2.43
3716 6794 6.770542 TGTATGTACATCCCACACAGTTTTA 58.229 36.000 12.68 0.00 0.00 1.52
3717 6795 7.398829 TGTATGTACATCCCACACAGTTTTAT 58.601 34.615 12.68 0.00 0.00 1.40
3718 6796 6.757897 ATGTACATCCCACACAGTTTTATG 57.242 37.500 1.41 0.00 0.00 1.90
3719 6797 5.626142 TGTACATCCCACACAGTTTTATGT 58.374 37.500 0.00 0.00 0.00 2.29
3720 6798 6.770542 TGTACATCCCACACAGTTTTATGTA 58.229 36.000 0.00 0.00 0.00 2.29
3721 6799 7.398829 TGTACATCCCACACAGTTTTATGTAT 58.601 34.615 0.00 0.00 32.70 2.29
3722 6800 8.541234 TGTACATCCCACACAGTTTTATGTATA 58.459 33.333 0.00 0.00 32.70 1.47
3723 6801 7.859325 ACATCCCACACAGTTTTATGTATAC 57.141 36.000 0.00 0.00 0.00 1.47
3724 6802 6.537301 ACATCCCACACAGTTTTATGTATACG 59.463 38.462 0.00 0.00 0.00 3.06
3725 6803 4.871557 TCCCACACAGTTTTATGTATACGC 59.128 41.667 0.00 0.00 0.00 4.42
3726 6804 4.873827 CCCACACAGTTTTATGTATACGCT 59.126 41.667 0.00 0.00 0.00 5.07
3727 6805 5.006358 CCCACACAGTTTTATGTATACGCTC 59.994 44.000 0.00 0.00 0.00 5.03
3728 6806 5.276207 CCACACAGTTTTATGTATACGCTCG 60.276 44.000 0.00 0.00 0.00 5.03
3729 6807 5.287752 CACACAGTTTTATGTATACGCTCGT 59.712 40.000 0.00 0.00 0.00 4.18
3730 6808 5.287752 ACACAGTTTTATGTATACGCTCGTG 59.712 40.000 5.05 0.00 0.00 4.35
3731 6809 5.287752 CACAGTTTTATGTATACGCTCGTGT 59.712 40.000 5.05 0.73 0.00 4.49
3732 6810 5.287752 ACAGTTTTATGTATACGCTCGTGTG 59.712 40.000 5.05 0.00 0.00 3.82
3733 6811 5.287752 CAGTTTTATGTATACGCTCGTGTGT 59.712 40.000 8.87 8.87 40.39 3.72
3734 6812 5.287752 AGTTTTATGTATACGCTCGTGTGTG 59.712 40.000 13.57 0.00 37.50 3.82
3735 6813 4.619437 TTATGTATACGCTCGTGTGTGA 57.381 40.909 13.57 0.00 37.50 3.58
3736 6814 2.993449 TGTATACGCTCGTGTGTGAA 57.007 45.000 13.57 0.00 37.50 3.18
3737 6815 3.285816 TGTATACGCTCGTGTGTGAAA 57.714 42.857 13.57 0.00 37.50 2.69
3738 6816 3.239254 TGTATACGCTCGTGTGTGAAAG 58.761 45.455 13.57 0.00 37.50 2.62
3739 6817 1.710013 ATACGCTCGTGTGTGAAAGG 58.290 50.000 13.57 0.00 37.50 3.11
3740 6818 0.386476 TACGCTCGTGTGTGAAAGGT 59.614 50.000 13.57 0.00 37.50 3.50
3741 6819 1.151777 ACGCTCGTGTGTGAAAGGTG 61.152 55.000 2.39 0.00 35.34 4.00
3742 6820 1.151777 CGCTCGTGTGTGAAAGGTGT 61.152 55.000 0.00 0.00 0.00 4.16
3743 6821 1.860676 GCTCGTGTGTGAAAGGTGTA 58.139 50.000 0.00 0.00 0.00 2.90
3744 6822 2.206750 GCTCGTGTGTGAAAGGTGTAA 58.793 47.619 0.00 0.00 0.00 2.41
3745 6823 2.033151 GCTCGTGTGTGAAAGGTGTAAC 60.033 50.000 0.00 0.00 0.00 2.50
3746 6824 3.454375 CTCGTGTGTGAAAGGTGTAACT 58.546 45.455 0.00 0.00 36.74 2.24
3747 6825 4.613944 CTCGTGTGTGAAAGGTGTAACTA 58.386 43.478 0.00 0.00 36.74 2.24
3748 6826 5.204409 TCGTGTGTGAAAGGTGTAACTAT 57.796 39.130 0.00 0.00 36.74 2.12
3749 6827 5.224888 TCGTGTGTGAAAGGTGTAACTATC 58.775 41.667 0.00 0.00 36.74 2.08
3750 6828 4.986034 CGTGTGTGAAAGGTGTAACTATCA 59.014 41.667 0.00 0.00 36.74 2.15
3751 6829 5.107607 CGTGTGTGAAAGGTGTAACTATCAC 60.108 44.000 0.00 0.00 40.97 3.06
3752 6830 5.756347 GTGTGTGAAAGGTGTAACTATCACA 59.244 40.000 2.54 2.54 44.63 3.58
3754 6832 5.919755 TGTGAAAGGTGTAACTATCACACA 58.080 37.500 7.80 0.00 46.53 3.72
3755 6833 5.756347 TGTGAAAGGTGTAACTATCACACAC 59.244 40.000 7.80 0.00 46.53 3.82
3756 6834 4.986034 TGAAAGGTGTAACTATCACACACG 59.014 41.667 7.80 0.00 46.53 4.49
3757 6835 2.955614 AGGTGTAACTATCACACACGC 58.044 47.619 7.80 0.00 46.53 5.34
3758 6836 2.561419 AGGTGTAACTATCACACACGCT 59.439 45.455 7.80 0.00 46.53 5.07
3759 6837 2.921754 GGTGTAACTATCACACACGCTC 59.078 50.000 7.80 0.00 46.53 5.03
3760 6838 3.367087 GGTGTAACTATCACACACGCTCT 60.367 47.826 7.80 0.00 46.53 4.09
3761 6839 3.608506 GTGTAACTATCACACACGCTCTG 59.391 47.826 0.92 0.00 44.58 3.35
3762 6840 3.254903 TGTAACTATCACACACGCTCTGT 59.745 43.478 0.00 0.00 0.00 3.41
3763 6841 2.638556 ACTATCACACACGCTCTGTC 57.361 50.000 0.00 0.00 0.00 3.51
3764 6842 2.163509 ACTATCACACACGCTCTGTCT 58.836 47.619 0.00 0.00 0.00 3.41
3765 6843 2.558795 ACTATCACACACGCTCTGTCTT 59.441 45.455 0.00 0.00 0.00 3.01
3766 6844 1.788258 ATCACACACGCTCTGTCTTG 58.212 50.000 0.00 0.00 0.00 3.02
3767 6845 0.249447 TCACACACGCTCTGTCTTGG 60.249 55.000 0.00 0.00 0.00 3.61
3768 6846 0.530650 CACACACGCTCTGTCTTGGT 60.531 55.000 0.00 0.00 0.00 3.67
3769 6847 0.178068 ACACACGCTCTGTCTTGGTT 59.822 50.000 0.00 0.00 0.00 3.67
3770 6848 1.411246 ACACACGCTCTGTCTTGGTTA 59.589 47.619 0.00 0.00 0.00 2.85
3771 6849 2.159014 ACACACGCTCTGTCTTGGTTAA 60.159 45.455 0.00 0.00 0.00 2.01
3772 6850 2.221055 CACACGCTCTGTCTTGGTTAAC 59.779 50.000 0.00 0.00 0.00 2.01
3773 6851 2.102588 ACACGCTCTGTCTTGGTTAACT 59.897 45.455 5.42 0.00 0.00 2.24
3774 6852 2.476619 CACGCTCTGTCTTGGTTAACTG 59.523 50.000 5.42 0.00 0.00 3.16
3775 6853 2.102588 ACGCTCTGTCTTGGTTAACTGT 59.897 45.455 5.42 0.00 0.00 3.55
3776 6854 3.131396 CGCTCTGTCTTGGTTAACTGTT 58.869 45.455 5.42 0.00 0.00 3.16
3777 6855 3.560068 CGCTCTGTCTTGGTTAACTGTTT 59.440 43.478 5.42 0.00 0.00 2.83
3778 6856 4.552767 CGCTCTGTCTTGGTTAACTGTTTG 60.553 45.833 5.42 0.00 0.00 2.93
3779 6857 4.789802 GCTCTGTCTTGGTTAACTGTTTGC 60.790 45.833 5.42 0.00 0.00 3.68
3780 6858 4.523083 TCTGTCTTGGTTAACTGTTTGCT 58.477 39.130 5.42 0.00 0.00 3.91
3781 6859 4.947388 TCTGTCTTGGTTAACTGTTTGCTT 59.053 37.500 5.42 0.00 0.00 3.91
3782 6860 5.417580 TCTGTCTTGGTTAACTGTTTGCTTT 59.582 36.000 5.42 0.00 0.00 3.51
3783 6861 5.646606 TGTCTTGGTTAACTGTTTGCTTTC 58.353 37.500 5.42 0.00 0.00 2.62
3784 6862 5.184096 TGTCTTGGTTAACTGTTTGCTTTCA 59.816 36.000 5.42 0.00 0.00 2.69
3785 6863 6.127479 TGTCTTGGTTAACTGTTTGCTTTCAT 60.127 34.615 5.42 0.00 0.00 2.57
3786 6864 6.198966 GTCTTGGTTAACTGTTTGCTTTCATG 59.801 38.462 5.42 0.00 0.00 3.07
3787 6865 5.843673 TGGTTAACTGTTTGCTTTCATGA 57.156 34.783 5.42 0.00 0.00 3.07
3788 6866 6.214191 TGGTTAACTGTTTGCTTTCATGAA 57.786 33.333 3.38 3.38 0.00 2.57
3789 6867 6.039616 TGGTTAACTGTTTGCTTTCATGAAC 58.960 36.000 7.89 0.00 0.00 3.18
3790 6868 6.127479 TGGTTAACTGTTTGCTTTCATGAACT 60.127 34.615 7.89 0.00 0.00 3.01
3791 6869 7.067615 TGGTTAACTGTTTGCTTTCATGAACTA 59.932 33.333 7.89 0.00 0.00 2.24
3792 6870 7.378728 GGTTAACTGTTTGCTTTCATGAACTAC 59.621 37.037 7.89 1.05 0.00 2.73
3793 6871 6.449635 AACTGTTTGCTTTCATGAACTACA 57.550 33.333 7.89 3.88 0.00 2.74
3794 6872 6.639632 ACTGTTTGCTTTCATGAACTACAT 57.360 33.333 7.89 0.00 40.17 2.29
3795 6873 6.672147 ACTGTTTGCTTTCATGAACTACATC 58.328 36.000 7.89 4.50 37.07 3.06
3796 6874 6.262944 ACTGTTTGCTTTCATGAACTACATCA 59.737 34.615 7.89 8.19 37.07 3.07
3797 6875 6.437928 TGTTTGCTTTCATGAACTACATCAC 58.562 36.000 7.89 7.34 37.07 3.06
3798 6876 6.039159 TGTTTGCTTTCATGAACTACATCACA 59.961 34.615 7.89 9.50 37.07 3.58
3799 6877 5.611796 TGCTTTCATGAACTACATCACAC 57.388 39.130 7.89 0.00 37.07 3.82
3800 6878 5.062528 TGCTTTCATGAACTACATCACACA 58.937 37.500 7.89 0.00 37.07 3.72
3801 6879 5.706833 TGCTTTCATGAACTACATCACACAT 59.293 36.000 7.89 0.00 37.07 3.21
3802 6880 6.025896 GCTTTCATGAACTACATCACACATG 58.974 40.000 7.89 0.00 37.07 3.21
3803 6881 6.128200 GCTTTCATGAACTACATCACACATGA 60.128 38.462 7.89 0.00 41.05 3.07
3805 6883 7.926674 TTCATGAACTACATCACACATGATT 57.073 32.000 3.38 0.00 43.40 2.57
3806 6884 7.926674 TCATGAACTACATCACACATGATTT 57.073 32.000 0.00 0.00 43.40 2.17
3807 6885 9.447157 TTCATGAACTACATCACACATGATTTA 57.553 29.630 3.38 0.00 43.40 1.40
3808 6886 9.447157 TCATGAACTACATCACACATGATTTAA 57.553 29.630 0.00 0.00 43.40 1.52
3811 6889 9.230122 TGAACTACATCACACATGATTTAATGT 57.770 29.630 0.00 5.34 43.40 2.71
3821 6899 9.897744 CACACATGATTTAATGTAGAAAACTGT 57.102 29.630 0.00 0.00 38.75 3.55
3827 6905 9.237187 TGATTTAATGTAGAAAACTGTATGGCA 57.763 29.630 0.00 0.00 0.00 4.92
3830 6908 9.853555 TTTAATGTAGAAAACTGTATGGCATTG 57.146 29.630 4.78 0.00 0.00 2.82
3831 6909 5.895636 TGTAGAAAACTGTATGGCATTGG 57.104 39.130 4.78 0.00 0.00 3.16
3832 6910 4.704540 TGTAGAAAACTGTATGGCATTGGG 59.295 41.667 4.78 0.00 0.00 4.12
3833 6911 2.497273 AGAAAACTGTATGGCATTGGGC 59.503 45.455 4.78 0.00 43.74 5.36
3834 6912 2.236489 AAACTGTATGGCATTGGGCT 57.764 45.000 4.78 0.00 44.01 5.19
3835 6913 3.380471 AAACTGTATGGCATTGGGCTA 57.620 42.857 4.78 0.00 44.01 3.93
3836 6914 3.600448 AACTGTATGGCATTGGGCTAT 57.400 42.857 4.78 0.00 46.46 2.97
3837 6915 3.146104 ACTGTATGGCATTGGGCTATC 57.854 47.619 4.78 0.00 43.38 2.08
3838 6916 2.224867 ACTGTATGGCATTGGGCTATCC 60.225 50.000 4.78 0.00 43.38 2.59
3839 6917 1.779700 TGTATGGCATTGGGCTATCCA 59.220 47.619 4.78 0.00 43.38 3.41
3840 6918 2.379567 TGTATGGCATTGGGCTATCCAT 59.620 45.455 4.78 0.00 46.52 3.41
3841 6919 2.226962 ATGGCATTGGGCTATCCATC 57.773 50.000 0.00 0.00 46.52 3.51
3842 6920 0.852155 TGGCATTGGGCTATCCATCA 59.148 50.000 0.00 0.00 46.52 3.07
3843 6921 1.251251 GGCATTGGGCTATCCATCAC 58.749 55.000 0.00 0.00 46.52 3.06
3844 6922 1.479205 GGCATTGGGCTATCCATCACA 60.479 52.381 0.00 0.00 46.52 3.58
3845 6923 2.309613 GCATTGGGCTATCCATCACAA 58.690 47.619 0.00 0.00 46.52 3.33
3846 6924 2.295349 GCATTGGGCTATCCATCACAAG 59.705 50.000 0.00 0.00 46.52 3.16
3847 6925 2.057137 TTGGGCTATCCATCACAAGC 57.943 50.000 0.00 0.00 46.52 4.01
3848 6926 0.179048 TGGGCTATCCATCACAAGCG 60.179 55.000 0.00 0.00 41.46 4.68
3849 6927 1.510480 GGGCTATCCATCACAAGCGC 61.510 60.000 0.00 0.00 40.10 5.92
3850 6928 0.533755 GGCTATCCATCACAAGCGCT 60.534 55.000 2.64 2.64 35.79 5.92
3851 6929 1.303309 GCTATCCATCACAAGCGCTT 58.697 50.000 18.98 18.98 0.00 4.68
3852 6930 1.672881 GCTATCCATCACAAGCGCTTT 59.327 47.619 22.51 9.51 0.00 3.51
3853 6931 2.098117 GCTATCCATCACAAGCGCTTTT 59.902 45.455 22.51 12.44 0.00 2.27
3854 6932 3.312421 GCTATCCATCACAAGCGCTTTTA 59.688 43.478 22.51 9.22 0.00 1.52
3855 6933 4.023707 GCTATCCATCACAAGCGCTTTTAT 60.024 41.667 22.51 11.30 0.00 1.40
3856 6934 4.989279 ATCCATCACAAGCGCTTTTATT 57.011 36.364 22.51 3.02 0.00 1.40
3857 6935 4.095410 TCCATCACAAGCGCTTTTATTG 57.905 40.909 22.51 12.66 0.00 1.90
3858 6936 2.599973 CCATCACAAGCGCTTTTATTGC 59.400 45.455 22.51 0.00 0.00 3.56
3859 6937 2.346099 TCACAAGCGCTTTTATTGCC 57.654 45.000 22.51 0.00 0.00 4.52
3860 6938 1.611006 TCACAAGCGCTTTTATTGCCA 59.389 42.857 22.51 0.00 0.00 4.92
3861 6939 1.987770 CACAAGCGCTTTTATTGCCAG 59.012 47.619 22.51 8.42 0.00 4.85
3862 6940 1.885887 ACAAGCGCTTTTATTGCCAGA 59.114 42.857 22.51 0.00 0.00 3.86
3863 6941 2.295909 ACAAGCGCTTTTATTGCCAGAA 59.704 40.909 22.51 0.00 0.00 3.02
3864 6942 2.636768 AGCGCTTTTATTGCCAGAAC 57.363 45.000 2.64 0.00 0.00 3.01
3865 6943 1.202348 AGCGCTTTTATTGCCAGAACC 59.798 47.619 2.64 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
211 215 8.904099 TTGTTGTTCCCTTTGTTTCTTTTTAA 57.096 26.923 0.00 0.00 0.00 1.52
218 222 5.391523 GCCTTTTTGTTGTTCCCTTTGTTTC 60.392 40.000 0.00 0.00 0.00 2.78
286 292 9.952030 TTTTTCCTTTCTTTATTGGTTTTCACT 57.048 25.926 0.00 0.00 0.00 3.41
311 317 6.155136 TCGTTTTTCTGTTTTTAACGGGTTT 58.845 32.000 0.00 0.00 41.20 3.27
323 329 8.541133 TTTCCTTTGATTTTCGTTTTTCTGTT 57.459 26.923 0.00 0.00 0.00 3.16
327 333 9.636965 CTCATTTTCCTTTGATTTTCGTTTTTC 57.363 29.630 0.00 0.00 0.00 2.29
436 442 4.274978 TCTCTGGTTTTCTTCGGGTTTTT 58.725 39.130 0.00 0.00 0.00 1.94
437 443 3.893521 TCTCTGGTTTTCTTCGGGTTTT 58.106 40.909 0.00 0.00 0.00 2.43
438 444 3.570912 TCTCTGGTTTTCTTCGGGTTT 57.429 42.857 0.00 0.00 0.00 3.27
439 445 3.135895 TCTTCTCTGGTTTTCTTCGGGTT 59.864 43.478 0.00 0.00 0.00 4.11
440 446 2.704065 TCTTCTCTGGTTTTCTTCGGGT 59.296 45.455 0.00 0.00 0.00 5.28
491 503 3.548818 GCTCGCTGATGTGTTTGTTTCTT 60.549 43.478 0.00 0.00 0.00 2.52
503 515 1.588403 CGGTCTGAGCTCGCTGATG 60.588 63.158 9.64 1.44 0.00 3.07
575 587 2.558795 TCTCGTCTACAGCTTTTCTGCT 59.441 45.455 0.00 0.00 46.76 4.24
582 594 2.223923 GCATCCATCTCGTCTACAGCTT 60.224 50.000 0.00 0.00 0.00 3.74
661 673 5.678107 GCACCAGACCAGATCATCAAAATTC 60.678 44.000 0.00 0.00 0.00 2.17
672 1002 2.129555 AAAGCCGCACCAGACCAGAT 62.130 55.000 0.00 0.00 0.00 2.90
674 1004 2.281761 AAAGCCGCACCAGACCAG 60.282 61.111 0.00 0.00 0.00 4.00
720 1050 7.881232 ACAACTCAACTCGGATTTTTATCCTAA 59.119 33.333 0.00 0.00 38.57 2.69
804 3119 2.282783 GCAGGGGGCCACGAAAATT 61.283 57.895 4.39 0.00 36.11 1.82
830 3145 5.313280 AGTTAGGACCCACATTAAACACA 57.687 39.130 0.00 0.00 0.00 3.72
875 3488 3.342377 TCCATAGCATCGACAAAACCA 57.658 42.857 0.00 0.00 0.00 3.67
997 3620 2.543445 CGTCAGCTCCAGATCTCATGAC 60.543 54.545 0.00 2.54 33.85 3.06
1000 3623 2.064434 TCGTCAGCTCCAGATCTCAT 57.936 50.000 0.00 0.00 0.00 2.90
1013 3638 3.390135 TCAGTGTTAGGCTTTTCGTCAG 58.610 45.455 0.00 0.00 0.00 3.51
1014 3639 3.069016 TCTCAGTGTTAGGCTTTTCGTCA 59.931 43.478 0.00 0.00 0.00 4.35
1022 3647 3.030291 CTCTCCATCTCAGTGTTAGGCT 58.970 50.000 0.00 0.00 0.00 4.58
1047 3679 2.596904 TCCTCGGATTGGAACGATTC 57.403 50.000 0.00 0.00 38.56 2.52
1101 3733 1.755008 GCGCCCTAGACTCTCAGGT 60.755 63.158 0.00 0.00 0.00 4.00
1298 3942 3.593328 AGATTCCCCTTCCATCTTTGTGA 59.407 43.478 0.00 0.00 0.00 3.58
1315 3962 2.384203 CGGAACCGGAAGCAGATTC 58.616 57.895 9.46 0.00 37.17 2.52
1461 4162 0.243907 CGTCACCGGAGACATCAACT 59.756 55.000 28.04 0.00 38.43 3.16
1487 4191 7.384524 TCCATCTCCTTCTTCATATCATTGT 57.615 36.000 0.00 0.00 0.00 2.71
1488 4192 9.602568 CTATCCATCTCCTTCTTCATATCATTG 57.397 37.037 0.00 0.00 0.00 2.82
1489 4193 9.558133 TCTATCCATCTCCTTCTTCATATCATT 57.442 33.333 0.00 0.00 0.00 2.57
1614 4324 1.375013 GAAGAACCCGCGGCTACAA 60.375 57.895 22.85 0.00 0.00 2.41
1733 4479 1.515020 GTGGCTGCAAACACCAACA 59.485 52.632 0.50 0.00 34.63 3.33
1749 4495 2.034879 GTGCATGGGACTCACGGTG 61.035 63.158 0.56 0.56 0.00 4.94
2054 4849 3.117491 TGACAGCAAGAGAAGACAAGG 57.883 47.619 0.00 0.00 0.00 3.61
2288 5361 2.202932 CGCTGTAATGGCGCCTCT 60.203 61.111 29.70 17.04 45.83 3.69
2464 5537 3.454447 CCACCAGTGACCTTATATGTCCA 59.546 47.826 0.00 0.00 31.60 4.02
2547 5620 3.420893 TGAACCCTTAGGCATTGTTCTG 58.579 45.455 15.50 0.00 36.98 3.02
2684 5757 0.390735 GCAAGCTTTGGGCATGAAGG 60.391 55.000 0.00 0.00 41.57 3.46
2732 5805 1.909302 CCACCTTAGGGTCACTGTCAT 59.091 52.381 2.32 0.00 45.41 3.06
2760 5833 3.963428 AGAGACCAAGCGACAGTAATT 57.037 42.857 0.00 0.00 0.00 1.40
3090 6163 2.248280 TCAACCTATGTGCACACGTT 57.752 45.000 24.37 20.58 0.00 3.99
3091 6164 2.472695 ATCAACCTATGTGCACACGT 57.527 45.000 24.37 15.70 0.00 4.49
3092 6165 2.159531 CCAATCAACCTATGTGCACACG 60.160 50.000 24.37 16.08 0.00 4.49
3093 6166 2.415893 GCCAATCAACCTATGTGCACAC 60.416 50.000 24.37 0.00 0.00 3.82
3094 6167 1.818060 GCCAATCAACCTATGTGCACA 59.182 47.619 24.08 24.08 0.00 4.57
3095 6168 2.094675 AGCCAATCAACCTATGTGCAC 58.905 47.619 10.75 10.75 0.00 4.57
3096 6169 2.093890 CAGCCAATCAACCTATGTGCA 58.906 47.619 0.00 0.00 0.00 4.57
3097 6170 2.094675 ACAGCCAATCAACCTATGTGC 58.905 47.619 0.00 0.00 0.00 4.57
3098 6171 3.674138 GCAACAGCCAATCAACCTATGTG 60.674 47.826 0.00 0.00 0.00 3.21
3099 6172 2.493278 GCAACAGCCAATCAACCTATGT 59.507 45.455 0.00 0.00 0.00 2.29
3100 6173 2.756760 AGCAACAGCCAATCAACCTATG 59.243 45.455 0.00 0.00 0.00 2.23
3101 6174 3.019564 GAGCAACAGCCAATCAACCTAT 58.980 45.455 0.00 0.00 0.00 2.57
3102 6175 2.040278 AGAGCAACAGCCAATCAACCTA 59.960 45.455 0.00 0.00 0.00 3.08
3103 6176 1.202976 AGAGCAACAGCCAATCAACCT 60.203 47.619 0.00 0.00 0.00 3.50
3104 6177 1.251251 AGAGCAACAGCCAATCAACC 58.749 50.000 0.00 0.00 0.00 3.77
3105 6178 2.669364 CAAGAGCAACAGCCAATCAAC 58.331 47.619 0.00 0.00 0.00 3.18
3106 6179 1.000060 GCAAGAGCAACAGCCAATCAA 60.000 47.619 0.00 0.00 41.58 2.57
3107 6180 0.599558 GCAAGAGCAACAGCCAATCA 59.400 50.000 0.00 0.00 41.58 2.57
3108 6181 0.886563 AGCAAGAGCAACAGCCAATC 59.113 50.000 0.00 0.00 45.49 2.67
3109 6182 0.601558 CAGCAAGAGCAACAGCCAAT 59.398 50.000 0.00 0.00 45.49 3.16
3110 6183 2.035421 CAGCAAGAGCAACAGCCAA 58.965 52.632 0.00 0.00 45.49 4.52
3111 6184 2.558286 GCAGCAAGAGCAACAGCCA 61.558 57.895 0.00 0.00 45.49 4.75
3112 6185 1.803366 AAGCAGCAAGAGCAACAGCC 61.803 55.000 0.00 0.00 45.49 4.85
3113 6186 0.386985 GAAGCAGCAAGAGCAACAGC 60.387 55.000 0.00 0.00 45.49 4.40
3114 6187 0.949397 TGAAGCAGCAAGAGCAACAG 59.051 50.000 0.00 0.00 45.49 3.16
3115 6188 0.664761 GTGAAGCAGCAAGAGCAACA 59.335 50.000 0.00 0.00 45.49 3.33
3168 6242 6.877611 TGTAAAGACAAGGAAGAATGGTTC 57.122 37.500 0.00 0.00 30.68 3.62
3259 6335 2.583143 ACGCTACTTCCAAGCCTTTTT 58.417 42.857 0.00 0.00 36.60 1.94
3260 6336 2.271944 ACGCTACTTCCAAGCCTTTT 57.728 45.000 0.00 0.00 36.60 2.27
3261 6337 3.270877 CATACGCTACTTCCAAGCCTTT 58.729 45.455 0.00 0.00 36.60 3.11
3262 6338 2.906354 CATACGCTACTTCCAAGCCTT 58.094 47.619 0.00 0.00 36.60 4.35
3283 6359 4.099266 TCATGGTCACCCAAAGAAACAAAG 59.901 41.667 0.00 0.00 46.04 2.77
3303 6379 2.170607 CTCCATTTCCACGTAGGGTCAT 59.829 50.000 0.00 0.00 38.24 3.06
3396 6474 7.959651 CGTACTAGTGGATGTAACGGTTATATC 59.040 40.741 22.22 22.22 34.23 1.63
3404 6482 2.223112 ACGCGTACTAGTGGATGTAACG 60.223 50.000 11.67 6.69 0.00 3.18
3413 6491 0.388134 AGCACCAACGCGTACTAGTG 60.388 55.000 14.46 18.27 36.85 2.74
3414 6492 1.167851 TAGCACCAACGCGTACTAGT 58.832 50.000 14.46 4.68 36.85 2.57
3415 6493 2.486951 ATAGCACCAACGCGTACTAG 57.513 50.000 14.46 4.57 36.85 2.57
3416 6494 2.682352 TGTATAGCACCAACGCGTACTA 59.318 45.455 14.46 10.13 36.85 1.82
3417 6495 1.473677 TGTATAGCACCAACGCGTACT 59.526 47.619 14.46 8.04 36.85 2.73
3418 6496 1.912001 TGTATAGCACCAACGCGTAC 58.088 50.000 14.46 3.75 36.85 3.67
3419 6497 2.651135 TTGTATAGCACCAACGCGTA 57.349 45.000 14.46 0.00 36.85 4.42
3420 6498 1.461897 GTTTGTATAGCACCAACGCGT 59.538 47.619 5.58 5.58 36.85 6.01
3421 6499 1.526184 CGTTTGTATAGCACCAACGCG 60.526 52.381 3.53 3.53 45.58 6.01
3422 6500 2.153680 CGTTTGTATAGCACCAACGC 57.846 50.000 1.60 0.00 45.58 4.84
3424 6502 4.492791 AAACCGTTTGTATAGCACCAAC 57.507 40.909 0.00 0.00 31.09 3.77
3425 6503 5.517322 AAAAACCGTTTGTATAGCACCAA 57.483 34.783 0.00 0.00 0.00 3.67
3426 6504 6.437094 GTTAAAAACCGTTTGTATAGCACCA 58.563 36.000 0.00 0.00 0.00 4.17
3427 6505 5.858049 GGTTAAAAACCGTTTGTATAGCACC 59.142 40.000 0.00 0.00 42.62 5.01
3428 6506 6.916401 GGTTAAAAACCGTTTGTATAGCAC 57.084 37.500 0.00 0.00 42.62 4.40
3442 6520 3.548616 CGTCACGGAAAGGGGTTAAAAAC 60.549 47.826 0.00 0.00 0.00 2.43
3443 6521 2.617774 CGTCACGGAAAGGGGTTAAAAA 59.382 45.455 0.00 0.00 0.00 1.94
3444 6522 2.220313 CGTCACGGAAAGGGGTTAAAA 58.780 47.619 0.00 0.00 0.00 1.52
3445 6523 1.881591 CGTCACGGAAAGGGGTTAAA 58.118 50.000 0.00 0.00 0.00 1.52
3446 6524 3.610637 CGTCACGGAAAGGGGTTAA 57.389 52.632 0.00 0.00 0.00 2.01
3458 6536 0.724453 CGGTTTCAAATGCCGTCACG 60.724 55.000 0.00 0.00 40.53 4.35
3459 6537 3.086161 CGGTTTCAAATGCCGTCAC 57.914 52.632 0.00 0.00 40.53 3.67
3464 6542 1.443702 GGCGACGGTTTCAAATGCC 60.444 57.895 0.00 0.00 0.00 4.40
3465 6543 0.318275 TTGGCGACGGTTTCAAATGC 60.318 50.000 0.00 0.00 0.00 3.56
3466 6544 1.001815 ACTTGGCGACGGTTTCAAATG 60.002 47.619 0.00 0.00 0.00 2.32
3467 6545 1.001815 CACTTGGCGACGGTTTCAAAT 60.002 47.619 0.00 0.00 0.00 2.32
3468 6546 0.378962 CACTTGGCGACGGTTTCAAA 59.621 50.000 0.00 0.00 0.00 2.69
3469 6547 0.462225 TCACTTGGCGACGGTTTCAA 60.462 50.000 0.00 0.00 0.00 2.69
3470 6548 0.878523 CTCACTTGGCGACGGTTTCA 60.879 55.000 0.00 0.00 0.00 2.69
3471 6549 0.878961 ACTCACTTGGCGACGGTTTC 60.879 55.000 0.00 0.00 0.00 2.78
3472 6550 1.145377 ACTCACTTGGCGACGGTTT 59.855 52.632 0.00 0.00 0.00 3.27
3473 6551 1.594293 CACTCACTTGGCGACGGTT 60.594 57.895 0.00 0.00 0.00 4.44
3474 6552 2.029073 CACTCACTTGGCGACGGT 59.971 61.111 0.00 0.00 0.00 4.83
3475 6553 1.734477 CTCACTCACTTGGCGACGG 60.734 63.158 0.00 0.00 0.00 4.79
3476 6554 1.007271 ACTCACTCACTTGGCGACG 60.007 57.895 0.00 0.00 0.00 5.12
3477 6555 0.249489 ACACTCACTCACTTGGCGAC 60.249 55.000 0.00 0.00 0.00 5.19
3478 6556 0.249447 CACACTCACTCACTTGGCGA 60.249 55.000 0.00 0.00 0.00 5.54
3479 6557 0.249447 TCACACTCACTCACTTGGCG 60.249 55.000 0.00 0.00 0.00 5.69
3480 6558 1.506493 CTCACACTCACTCACTTGGC 58.494 55.000 0.00 0.00 0.00 4.52
3481 6559 1.270518 CCCTCACACTCACTCACTTGG 60.271 57.143 0.00 0.00 0.00 3.61
3482 6560 1.270518 CCCCTCACACTCACTCACTTG 60.271 57.143 0.00 0.00 0.00 3.16
3483 6561 1.051812 CCCCTCACACTCACTCACTT 58.948 55.000 0.00 0.00 0.00 3.16
3484 6562 0.833834 CCCCCTCACACTCACTCACT 60.834 60.000 0.00 0.00 0.00 3.41
3485 6563 1.674057 CCCCCTCACACTCACTCAC 59.326 63.158 0.00 0.00 0.00 3.51
3486 6564 4.215370 CCCCCTCACACTCACTCA 57.785 61.111 0.00 0.00 0.00 3.41
3503 6581 2.346365 GGTCGTGTGGGAAGGACC 59.654 66.667 0.78 0.78 45.07 4.46
3504 6582 2.346365 GGGTCGTGTGGGAAGGAC 59.654 66.667 0.00 0.00 34.86 3.85
3505 6583 2.122769 TGGGTCGTGTGGGAAGGA 60.123 61.111 0.00 0.00 0.00 3.36
3506 6584 1.764571 TTCTGGGTCGTGTGGGAAGG 61.765 60.000 0.00 0.00 0.00 3.46
3507 6585 0.107831 TTTCTGGGTCGTGTGGGAAG 59.892 55.000 0.00 0.00 0.00 3.46
3508 6586 0.768622 ATTTCTGGGTCGTGTGGGAA 59.231 50.000 0.00 0.00 0.00 3.97
3509 6587 0.323629 GATTTCTGGGTCGTGTGGGA 59.676 55.000 0.00 0.00 0.00 4.37
3510 6588 0.036164 TGATTTCTGGGTCGTGTGGG 59.964 55.000 0.00 0.00 0.00 4.61
3511 6589 2.009774 GATGATTTCTGGGTCGTGTGG 58.990 52.381 0.00 0.00 0.00 4.17
3512 6590 1.660607 CGATGATTTCTGGGTCGTGTG 59.339 52.381 0.00 0.00 0.00 3.82
3513 6591 1.405526 CCGATGATTTCTGGGTCGTGT 60.406 52.381 0.00 0.00 0.00 4.49
3514 6592 1.290203 CCGATGATTTCTGGGTCGTG 58.710 55.000 0.00 0.00 0.00 4.35
3515 6593 0.178068 CCCGATGATTTCTGGGTCGT 59.822 55.000 0.00 0.00 35.01 4.34
3516 6594 0.532862 CCCCGATGATTTCTGGGTCG 60.533 60.000 0.00 0.00 42.48 4.79
3517 6595 0.837272 TCCCCGATGATTTCTGGGTC 59.163 55.000 2.57 0.00 46.38 4.46
3518 6596 1.522900 ATCCCCGATGATTTCTGGGT 58.477 50.000 2.57 0.00 46.38 4.51
3520 6598 2.616510 GCCTATCCCCGATGATTTCTGG 60.617 54.545 0.00 0.00 0.00 3.86
3521 6599 2.616510 GGCCTATCCCCGATGATTTCTG 60.617 54.545 0.00 0.00 0.00 3.02
3522 6600 1.630878 GGCCTATCCCCGATGATTTCT 59.369 52.381 0.00 0.00 0.00 2.52
3523 6601 1.630878 AGGCCTATCCCCGATGATTTC 59.369 52.381 1.29 0.00 34.51 2.17
3524 6602 1.747444 AGGCCTATCCCCGATGATTT 58.253 50.000 1.29 0.00 34.51 2.17
3525 6603 1.630878 GAAGGCCTATCCCCGATGATT 59.369 52.381 5.16 0.00 34.51 2.57
3526 6604 1.280457 GAAGGCCTATCCCCGATGAT 58.720 55.000 5.16 0.00 34.51 2.45
3527 6605 0.836400 GGAAGGCCTATCCCCGATGA 60.836 60.000 5.16 0.00 34.51 2.92
3528 6606 1.679898 GGAAGGCCTATCCCCGATG 59.320 63.158 5.16 0.00 34.51 3.84
3529 6607 4.234673 GGAAGGCCTATCCCCGAT 57.765 61.111 5.16 0.00 34.51 4.18
3534 6612 0.759436 TGTCTCGGGAAGGCCTATCC 60.759 60.000 20.01 20.01 36.16 2.59
3535 6613 0.389757 GTGTCTCGGGAAGGCCTATC 59.610 60.000 5.16 6.00 0.00 2.08
3536 6614 0.325296 TGTGTCTCGGGAAGGCCTAT 60.325 55.000 5.16 0.00 0.00 2.57
3537 6615 0.325296 ATGTGTCTCGGGAAGGCCTA 60.325 55.000 5.16 0.00 0.00 3.93
3538 6616 1.613630 ATGTGTCTCGGGAAGGCCT 60.614 57.895 0.00 0.00 0.00 5.19
3539 6617 1.450312 CATGTGTCTCGGGAAGGCC 60.450 63.158 0.00 0.00 0.00 5.19
3540 6618 2.109126 GCATGTGTCTCGGGAAGGC 61.109 63.158 0.00 0.00 0.00 4.35
3541 6619 0.742281 CAGCATGTGTCTCGGGAAGG 60.742 60.000 0.00 0.00 0.00 3.46
3542 6620 0.742281 CCAGCATGTGTCTCGGGAAG 60.742 60.000 0.00 0.00 0.00 3.46
3543 6621 1.296392 CCAGCATGTGTCTCGGGAA 59.704 57.895 0.00 0.00 0.00 3.97
3544 6622 2.659063 CCCAGCATGTGTCTCGGGA 61.659 63.158 0.00 0.00 35.57 5.14
3545 6623 2.124983 CCCAGCATGTGTCTCGGG 60.125 66.667 0.00 0.00 0.00 5.14
3546 6624 2.124983 CCCCAGCATGTGTCTCGG 60.125 66.667 0.00 0.00 0.00 4.63
3547 6625 2.821366 GCCCCAGCATGTGTCTCG 60.821 66.667 0.00 0.00 39.53 4.04
3548 6626 2.439156 GGCCCCAGCATGTGTCTC 60.439 66.667 0.00 0.00 42.56 3.36
3549 6627 4.415150 CGGCCCCAGCATGTGTCT 62.415 66.667 0.00 0.00 42.56 3.41
3550 6628 4.722700 ACGGCCCCAGCATGTGTC 62.723 66.667 0.00 0.00 42.56 3.67
3566 6644 3.733344 TTCTATGCCTCGCCCGCAC 62.733 63.158 0.00 0.00 39.49 5.34
3567 6645 3.025189 TTTCTATGCCTCGCCCGCA 62.025 57.895 0.00 0.00 41.28 5.69
3568 6646 2.203015 TTTCTATGCCTCGCCCGC 60.203 61.111 0.00 0.00 0.00 6.13
3569 6647 1.887707 GGTTTCTATGCCTCGCCCG 60.888 63.158 0.00 0.00 0.00 6.13
3570 6648 1.526225 GGGTTTCTATGCCTCGCCC 60.526 63.158 0.00 0.00 0.00 6.13
3571 6649 0.393808 TTGGGTTTCTATGCCTCGCC 60.394 55.000 0.00 0.00 0.00 5.54
3572 6650 1.604278 GATTGGGTTTCTATGCCTCGC 59.396 52.381 0.00 0.00 0.00 5.03
3573 6651 2.917933 TGATTGGGTTTCTATGCCTCG 58.082 47.619 0.00 0.00 0.00 4.63
3574 6652 5.221322 GGAAATGATTGGGTTTCTATGCCTC 60.221 44.000 0.00 0.00 35.29 4.70
3575 6653 4.651045 GGAAATGATTGGGTTTCTATGCCT 59.349 41.667 0.00 0.00 35.29 4.75
3576 6654 4.499696 CGGAAATGATTGGGTTTCTATGCC 60.500 45.833 0.00 0.00 35.29 4.40
3577 6655 4.097892 ACGGAAATGATTGGGTTTCTATGC 59.902 41.667 0.00 0.00 35.29 3.14
3578 6656 5.835113 ACGGAAATGATTGGGTTTCTATG 57.165 39.130 0.00 0.00 35.29 2.23
3579 6657 6.062095 CCTACGGAAATGATTGGGTTTCTAT 58.938 40.000 0.00 0.00 35.29 1.98
3580 6658 5.045432 ACCTACGGAAATGATTGGGTTTCTA 60.045 40.000 0.00 0.00 35.29 2.10
3581 6659 4.263771 ACCTACGGAAATGATTGGGTTTCT 60.264 41.667 0.00 0.00 35.29 2.52
3582 6660 4.014406 ACCTACGGAAATGATTGGGTTTC 58.986 43.478 0.00 0.00 34.42 2.78
3583 6661 4.042271 ACCTACGGAAATGATTGGGTTT 57.958 40.909 0.00 0.00 0.00 3.27
3584 6662 3.732048 ACCTACGGAAATGATTGGGTT 57.268 42.857 0.00 0.00 0.00 4.11
3585 6663 4.165372 ACATACCTACGGAAATGATTGGGT 59.835 41.667 6.88 0.00 0.00 4.51
3586 6664 4.714632 ACATACCTACGGAAATGATTGGG 58.285 43.478 6.88 0.00 0.00 4.12
3587 6665 6.285224 TGTACATACCTACGGAAATGATTGG 58.715 40.000 0.00 0.00 0.00 3.16
3588 6666 7.117812 GGATGTACATACCTACGGAAATGATTG 59.882 40.741 8.71 0.00 0.00 2.67
3589 6667 7.159372 GGATGTACATACCTACGGAAATGATT 58.841 38.462 8.71 0.00 0.00 2.57
3590 6668 6.295688 GGGATGTACATACCTACGGAAATGAT 60.296 42.308 27.44 0.00 38.82 2.45
3591 6669 5.011329 GGGATGTACATACCTACGGAAATGA 59.989 44.000 27.44 0.00 38.82 2.57
3592 6670 5.221561 TGGGATGTACATACCTACGGAAATG 60.222 44.000 32.60 0.00 42.54 2.32
3593 6671 4.903049 TGGGATGTACATACCTACGGAAAT 59.097 41.667 32.60 0.00 42.54 2.17
3594 6672 4.099881 GTGGGATGTACATACCTACGGAAA 59.900 45.833 32.60 12.21 42.54 3.13
3595 6673 3.638160 GTGGGATGTACATACCTACGGAA 59.362 47.826 32.60 12.92 42.54 4.30
3596 6674 3.225104 GTGGGATGTACATACCTACGGA 58.775 50.000 32.60 13.62 42.54 4.69
3597 6675 2.960384 TGTGGGATGTACATACCTACGG 59.040 50.000 32.60 0.00 42.54 4.02
3598 6676 3.549423 CGTGTGGGATGTACATACCTACG 60.549 52.174 33.11 33.11 42.54 3.51
3599 6677 3.243636 CCGTGTGGGATGTACATACCTAC 60.244 52.174 32.60 27.81 42.54 3.18
3600 6678 2.960384 CCGTGTGGGATGTACATACCTA 59.040 50.000 32.60 21.02 42.54 3.08
3601 6679 1.760613 CCGTGTGGGATGTACATACCT 59.239 52.381 32.60 2.15 42.54 3.08
3602 6680 1.483415 ACCGTGTGGGATGTACATACC 59.517 52.381 27.90 27.90 42.39 2.73
3603 6681 2.166870 TCACCGTGTGGGATGTACATAC 59.833 50.000 9.83 9.83 40.75 2.39
3604 6682 2.458620 TCACCGTGTGGGATGTACATA 58.541 47.619 8.71 0.00 40.75 2.29
3605 6683 1.271856 TCACCGTGTGGGATGTACAT 58.728 50.000 8.43 8.43 40.75 2.29
3606 6684 1.049402 TTCACCGTGTGGGATGTACA 58.951 50.000 0.00 0.00 40.75 2.90
3607 6685 2.277084 GATTCACCGTGTGGGATGTAC 58.723 52.381 0.00 0.00 40.75 2.90
3608 6686 1.208535 GGATTCACCGTGTGGGATGTA 59.791 52.381 0.00 0.00 40.75 2.29
3609 6687 0.035439 GGATTCACCGTGTGGGATGT 60.035 55.000 0.00 0.00 40.75 3.06
3610 6688 0.748005 GGGATTCACCGTGTGGGATG 60.748 60.000 0.00 0.00 40.75 3.51
3611 6689 1.204786 TGGGATTCACCGTGTGGGAT 61.205 55.000 0.00 0.61 40.75 3.85
3612 6690 1.836999 CTGGGATTCACCGTGTGGGA 61.837 60.000 0.00 0.00 40.75 4.37
3613 6691 1.377202 CTGGGATTCACCGTGTGGG 60.377 63.158 0.00 0.00 40.75 4.61
3614 6692 0.036164 TTCTGGGATTCACCGTGTGG 59.964 55.000 0.00 0.00 40.11 4.17
3615 6693 1.890876 TTTCTGGGATTCACCGTGTG 58.109 50.000 0.00 0.00 40.11 3.82
3616 6694 2.649531 TTTTCTGGGATTCACCGTGT 57.350 45.000 0.00 0.00 40.11 4.49
3617 6695 5.835113 ATATTTTTCTGGGATTCACCGTG 57.165 39.130 0.00 0.00 40.11 4.94
3618 6696 6.850752 AAATATTTTTCTGGGATTCACCGT 57.149 33.333 0.00 0.00 40.11 4.83
3619 6697 6.472163 CGAAAATATTTTTCTGGGATTCACCG 59.528 38.462 14.45 5.39 40.11 4.94
3620 6698 7.320399 ACGAAAATATTTTTCTGGGATTCACC 58.680 34.615 14.45 0.00 38.08 4.02
3621 6699 9.503427 CTACGAAAATATTTTTCTGGGATTCAC 57.497 33.333 14.45 0.00 0.00 3.18
3622 6700 8.682710 CCTACGAAAATATTTTTCTGGGATTCA 58.317 33.333 14.45 0.00 0.00 2.57
3623 6701 8.683615 ACCTACGAAAATATTTTTCTGGGATTC 58.316 33.333 19.60 5.04 0.00 2.52
3624 6702 8.589701 ACCTACGAAAATATTTTTCTGGGATT 57.410 30.769 19.60 4.50 0.00 3.01
3625 6703 9.862149 ATACCTACGAAAATATTTTTCTGGGAT 57.138 29.630 19.60 15.65 0.00 3.85
3626 6704 9.116067 CATACCTACGAAAATATTTTTCTGGGA 57.884 33.333 19.60 14.57 0.00 4.37
3627 6705 8.899771 ACATACCTACGAAAATATTTTTCTGGG 58.100 33.333 14.45 14.55 0.00 4.45
3634 6712 9.498176 GGGATGTACATACCTACGAAAATATTT 57.502 33.333 27.44 0.00 38.82 1.40
3635 6713 8.653191 TGGGATGTACATACCTACGAAAATATT 58.347 33.333 32.60 0.00 42.54 1.28
3636 6714 8.092687 GTGGGATGTACATACCTACGAAAATAT 58.907 37.037 32.60 0.00 42.54 1.28
3637 6715 7.069702 TGTGGGATGTACATACCTACGAAAATA 59.930 37.037 32.60 10.81 42.54 1.40
3638 6716 6.126997 TGTGGGATGTACATACCTACGAAAAT 60.127 38.462 32.60 0.00 42.54 1.82
3639 6717 5.187381 TGTGGGATGTACATACCTACGAAAA 59.813 40.000 32.60 12.21 42.54 2.29
3640 6718 4.710865 TGTGGGATGTACATACCTACGAAA 59.289 41.667 32.60 12.92 42.54 3.46
3641 6719 4.098349 GTGTGGGATGTACATACCTACGAA 59.902 45.833 32.60 13.62 42.54 3.85
3642 6720 3.633525 GTGTGGGATGTACATACCTACGA 59.366 47.826 32.60 13.98 42.54 3.43
3643 6721 3.549423 CGTGTGGGATGTACATACCTACG 60.549 52.174 33.11 33.11 42.54 3.51
3644 6722 3.243636 CCGTGTGGGATGTACATACCTAC 60.244 52.174 32.60 27.81 42.54 3.18
3645 6723 2.960384 CCGTGTGGGATGTACATACCTA 59.040 50.000 32.60 21.02 42.54 3.08
3646 6724 1.760613 CCGTGTGGGATGTACATACCT 59.239 52.381 32.60 2.15 42.54 3.08
3647 6725 1.483415 ACCGTGTGGGATGTACATACC 59.517 52.381 27.90 27.90 42.39 2.73
3648 6726 2.166870 TCACCGTGTGGGATGTACATAC 59.833 50.000 9.83 9.83 40.75 2.39
3649 6727 2.458620 TCACCGTGTGGGATGTACATA 58.541 47.619 8.71 0.00 40.75 2.29
3650 6728 1.271856 TCACCGTGTGGGATGTACAT 58.728 50.000 8.43 8.43 40.75 2.29
3651 6729 1.049402 TTCACCGTGTGGGATGTACA 58.951 50.000 0.00 0.00 40.75 2.90
3652 6730 2.277084 GATTCACCGTGTGGGATGTAC 58.723 52.381 0.00 0.00 40.75 2.90
3653 6731 1.208535 GGATTCACCGTGTGGGATGTA 59.791 52.381 0.00 0.00 40.75 2.29
3654 6732 0.035439 GGATTCACCGTGTGGGATGT 60.035 55.000 0.00 0.00 40.75 3.06
3655 6733 0.035534 TGGATTCACCGTGTGGGATG 60.036 55.000 0.00 0.00 42.61 3.51
3656 6734 0.253044 CTGGATTCACCGTGTGGGAT 59.747 55.000 0.00 0.61 42.61 3.85
3657 6735 0.834261 TCTGGATTCACCGTGTGGGA 60.834 55.000 0.00 0.00 42.61 4.37
3658 6736 0.391661 CTCTGGATTCACCGTGTGGG 60.392 60.000 0.00 0.00 42.61 4.61
3659 6737 0.608130 TCTCTGGATTCACCGTGTGG 59.392 55.000 0.00 0.00 42.61 4.17
3660 6738 2.455674 TTCTCTGGATTCACCGTGTG 57.544 50.000 0.00 0.00 42.61 3.82
3661 6739 3.139077 GTTTTCTCTGGATTCACCGTGT 58.861 45.455 0.00 0.00 42.61 4.49
3662 6740 2.157668 CGTTTTCTCTGGATTCACCGTG 59.842 50.000 0.00 0.00 42.61 4.94
3663 6741 2.224209 ACGTTTTCTCTGGATTCACCGT 60.224 45.455 0.00 0.00 42.61 4.83
3664 6742 2.413837 ACGTTTTCTCTGGATTCACCG 58.586 47.619 0.00 0.00 42.61 4.94
3665 6743 4.320275 GGAAACGTTTTCTCTGGATTCACC 60.320 45.833 15.89 2.94 39.54 4.02
3666 6744 4.784329 GGAAACGTTTTCTCTGGATTCAC 58.216 43.478 15.89 0.00 0.00 3.18
3683 6761 4.696402 TGGGATGTACATACAAACGGAAAC 59.304 41.667 19.79 0.00 39.99 2.78
3684 6762 4.696402 GTGGGATGTACATACAAACGGAAA 59.304 41.667 19.79 0.00 39.99 3.13
3685 6763 4.255301 GTGGGATGTACATACAAACGGAA 58.745 43.478 19.79 0.00 39.99 4.30
3686 6764 3.261137 TGTGGGATGTACATACAAACGGA 59.739 43.478 19.79 0.52 39.99 4.69
3687 6765 3.372822 GTGTGGGATGTACATACAAACGG 59.627 47.826 19.79 0.00 39.99 4.44
3688 6766 3.997681 TGTGTGGGATGTACATACAAACG 59.002 43.478 19.79 0.00 39.99 3.60
3689 6767 5.001232 ACTGTGTGGGATGTACATACAAAC 58.999 41.667 19.79 19.52 39.04 2.93
3690 6768 5.235850 ACTGTGTGGGATGTACATACAAA 57.764 39.130 19.79 9.75 39.04 2.83
3691 6769 4.901197 ACTGTGTGGGATGTACATACAA 57.099 40.909 19.79 5.62 39.04 2.41
3692 6770 4.901197 AACTGTGTGGGATGTACATACA 57.099 40.909 19.79 12.54 37.57 2.29
3693 6771 7.335924 ACATAAAACTGTGTGGGATGTACATAC 59.664 37.037 9.83 9.83 0.00 2.39
3694 6772 7.398829 ACATAAAACTGTGTGGGATGTACATA 58.601 34.615 8.71 0.00 0.00 2.29
3695 6773 6.245408 ACATAAAACTGTGTGGGATGTACAT 58.755 36.000 8.43 8.43 0.00 2.29
3696 6774 5.626142 ACATAAAACTGTGTGGGATGTACA 58.374 37.500 0.00 0.00 0.00 2.90
3697 6775 7.859325 ATACATAAAACTGTGTGGGATGTAC 57.141 36.000 0.00 0.00 32.72 2.90
3698 6776 7.707464 CGTATACATAAAACTGTGTGGGATGTA 59.293 37.037 3.32 0.00 33.99 2.29
3699 6777 6.537301 CGTATACATAAAACTGTGTGGGATGT 59.463 38.462 3.32 0.00 0.00 3.06
3700 6778 6.511121 GCGTATACATAAAACTGTGTGGGATG 60.511 42.308 3.32 0.00 0.00 3.51
3701 6779 5.526111 GCGTATACATAAAACTGTGTGGGAT 59.474 40.000 3.32 0.00 0.00 3.85
3702 6780 4.871557 GCGTATACATAAAACTGTGTGGGA 59.128 41.667 3.32 0.00 0.00 4.37
3703 6781 4.873827 AGCGTATACATAAAACTGTGTGGG 59.126 41.667 3.32 0.00 0.00 4.61
3704 6782 5.276207 CGAGCGTATACATAAAACTGTGTGG 60.276 44.000 3.32 0.00 0.00 4.17
3705 6783 5.287752 ACGAGCGTATACATAAAACTGTGTG 59.712 40.000 3.32 0.00 0.00 3.82
3706 6784 5.287752 CACGAGCGTATACATAAAACTGTGT 59.712 40.000 3.32 0.00 0.00 3.72
3707 6785 5.287752 ACACGAGCGTATACATAAAACTGTG 59.712 40.000 3.32 3.25 0.00 3.66
3708 6786 5.287752 CACACGAGCGTATACATAAAACTGT 59.712 40.000 3.32 0.00 0.00 3.55
3709 6787 5.287752 ACACACGAGCGTATACATAAAACTG 59.712 40.000 3.32 0.00 0.00 3.16
3710 6788 5.287752 CACACACGAGCGTATACATAAAACT 59.712 40.000 3.32 0.00 0.00 2.66
3711 6789 5.286797 TCACACACGAGCGTATACATAAAAC 59.713 40.000 3.32 0.00 0.00 2.43
3712 6790 5.400703 TCACACACGAGCGTATACATAAAA 58.599 37.500 3.32 0.00 0.00 1.52
3713 6791 4.984205 TCACACACGAGCGTATACATAAA 58.016 39.130 3.32 0.00 0.00 1.40
3714 6792 4.619437 TCACACACGAGCGTATACATAA 57.381 40.909 3.32 0.00 0.00 1.90
3715 6793 4.619437 TTCACACACGAGCGTATACATA 57.381 40.909 3.32 0.00 0.00 2.29
3716 6794 3.497297 TTCACACACGAGCGTATACAT 57.503 42.857 3.32 0.00 0.00 2.29
3717 6795 2.993449 TTCACACACGAGCGTATACA 57.007 45.000 3.32 0.00 0.00 2.29
3718 6796 2.597305 CCTTTCACACACGAGCGTATAC 59.403 50.000 0.00 0.00 0.00 1.47
3719 6797 2.229543 ACCTTTCACACACGAGCGTATA 59.770 45.455 0.00 0.00 0.00 1.47
3720 6798 1.000506 ACCTTTCACACACGAGCGTAT 59.999 47.619 0.00 0.00 0.00 3.06
3721 6799 0.386476 ACCTTTCACACACGAGCGTA 59.614 50.000 0.00 0.00 0.00 4.42
3722 6800 1.143183 ACCTTTCACACACGAGCGT 59.857 52.632 0.00 0.00 0.00 5.07
3723 6801 1.151777 ACACCTTTCACACACGAGCG 61.152 55.000 0.00 0.00 0.00 5.03
3724 6802 1.860676 TACACCTTTCACACACGAGC 58.139 50.000 0.00 0.00 0.00 5.03
3725 6803 3.454375 AGTTACACCTTTCACACACGAG 58.546 45.455 0.00 0.00 0.00 4.18
3726 6804 3.530265 AGTTACACCTTTCACACACGA 57.470 42.857 0.00 0.00 0.00 4.35
3727 6805 4.986034 TGATAGTTACACCTTTCACACACG 59.014 41.667 0.00 0.00 0.00 4.49
3728 6806 5.756347 TGTGATAGTTACACCTTTCACACAC 59.244 40.000 9.42 0.00 43.68 3.82
3729 6807 5.919755 TGTGATAGTTACACCTTTCACACA 58.080 37.500 9.42 0.00 43.68 3.72
3731 6809 5.756347 GTGTGTGATAGTTACACCTTTCACA 59.244 40.000 9.42 9.42 45.18 3.58
3732 6810 5.107607 CGTGTGTGATAGTTACACCTTTCAC 60.108 44.000 5.89 0.00 45.95 3.18
3733 6811 4.986034 CGTGTGTGATAGTTACACCTTTCA 59.014 41.667 5.89 0.00 45.95 2.69
3734 6812 4.143179 GCGTGTGTGATAGTTACACCTTTC 60.143 45.833 5.89 0.00 45.95 2.62
3735 6813 3.744426 GCGTGTGTGATAGTTACACCTTT 59.256 43.478 5.89 0.00 45.95 3.11
3736 6814 3.006537 AGCGTGTGTGATAGTTACACCTT 59.993 43.478 5.89 0.00 45.95 3.50
3737 6815 2.561419 AGCGTGTGTGATAGTTACACCT 59.439 45.455 5.89 0.00 45.95 4.00
3738 6816 2.921754 GAGCGTGTGTGATAGTTACACC 59.078 50.000 5.89 0.00 45.95 4.16
3739 6817 3.608506 CAGAGCGTGTGTGATAGTTACAC 59.391 47.826 0.00 0.00 46.52 2.90
3740 6818 3.254903 ACAGAGCGTGTGTGATAGTTACA 59.745 43.478 0.00 0.00 38.28 2.41
3741 6819 3.834610 ACAGAGCGTGTGTGATAGTTAC 58.165 45.455 0.00 0.00 38.28 2.50
3742 6820 3.756963 AGACAGAGCGTGTGTGATAGTTA 59.243 43.478 0.00 0.00 40.56 2.24
3743 6821 2.558795 AGACAGAGCGTGTGTGATAGTT 59.441 45.455 0.00 0.00 40.56 2.24
3744 6822 2.163509 AGACAGAGCGTGTGTGATAGT 58.836 47.619 0.00 0.00 40.56 2.12
3745 6823 2.919859 CAAGACAGAGCGTGTGTGATAG 59.080 50.000 0.00 0.00 40.56 2.08
3746 6824 2.352715 CCAAGACAGAGCGTGTGTGATA 60.353 50.000 0.00 0.00 40.56 2.15
3747 6825 1.606480 CCAAGACAGAGCGTGTGTGAT 60.606 52.381 0.00 0.00 40.56 3.06
3748 6826 0.249447 CCAAGACAGAGCGTGTGTGA 60.249 55.000 0.00 0.00 40.56 3.58
3749 6827 0.530650 ACCAAGACAGAGCGTGTGTG 60.531 55.000 0.00 0.00 40.56 3.82
3750 6828 0.178068 AACCAAGACAGAGCGTGTGT 59.822 50.000 0.00 0.00 40.56 3.72
3751 6829 2.148916 TAACCAAGACAGAGCGTGTG 57.851 50.000 0.00 0.00 40.56 3.82
3752 6830 2.102588 AGTTAACCAAGACAGAGCGTGT 59.897 45.455 0.88 0.00 44.49 4.49
3753 6831 2.476619 CAGTTAACCAAGACAGAGCGTG 59.523 50.000 0.88 0.00 0.00 5.34
3754 6832 2.102588 ACAGTTAACCAAGACAGAGCGT 59.897 45.455 0.88 0.00 0.00 5.07
3755 6833 2.755650 ACAGTTAACCAAGACAGAGCG 58.244 47.619 0.88 0.00 0.00 5.03
3756 6834 4.789802 GCAAACAGTTAACCAAGACAGAGC 60.790 45.833 0.88 0.00 0.00 4.09
3757 6835 4.576463 AGCAAACAGTTAACCAAGACAGAG 59.424 41.667 0.88 0.00 0.00 3.35
3758 6836 4.523083 AGCAAACAGTTAACCAAGACAGA 58.477 39.130 0.88 0.00 0.00 3.41
3759 6837 4.900635 AGCAAACAGTTAACCAAGACAG 57.099 40.909 0.88 0.00 0.00 3.51
3760 6838 5.184096 TGAAAGCAAACAGTTAACCAAGACA 59.816 36.000 0.88 0.00 0.00 3.41
3761 6839 5.646606 TGAAAGCAAACAGTTAACCAAGAC 58.353 37.500 0.88 0.00 0.00 3.01
3762 6840 5.906113 TGAAAGCAAACAGTTAACCAAGA 57.094 34.783 0.88 0.00 0.00 3.02
3763 6841 6.272318 TCATGAAAGCAAACAGTTAACCAAG 58.728 36.000 0.88 0.00 0.00 3.61
3764 6842 6.214191 TCATGAAAGCAAACAGTTAACCAA 57.786 33.333 0.88 0.00 0.00 3.67
3765 6843 5.843673 TCATGAAAGCAAACAGTTAACCA 57.156 34.783 0.88 0.00 0.00 3.67
3766 6844 6.273071 AGTTCATGAAAGCAAACAGTTAACC 58.727 36.000 10.35 0.00 0.00 2.85
3767 6845 7.913297 TGTAGTTCATGAAAGCAAACAGTTAAC 59.087 33.333 10.35 0.00 0.00 2.01
3768 6846 7.990917 TGTAGTTCATGAAAGCAAACAGTTAA 58.009 30.769 10.35 0.00 0.00 2.01
3769 6847 7.561021 TGTAGTTCATGAAAGCAAACAGTTA 57.439 32.000 10.35 0.00 0.00 2.24
3770 6848 6.449635 TGTAGTTCATGAAAGCAAACAGTT 57.550 33.333 10.35 0.00 0.00 3.16
3771 6849 6.262944 TGATGTAGTTCATGAAAGCAAACAGT 59.737 34.615 10.35 1.94 36.83 3.55
3772 6850 6.580041 GTGATGTAGTTCATGAAAGCAAACAG 59.420 38.462 10.35 0.00 36.83 3.16
3773 6851 6.039159 TGTGATGTAGTTCATGAAAGCAAACA 59.961 34.615 10.35 13.73 36.83 2.83
3774 6852 6.360681 GTGTGATGTAGTTCATGAAAGCAAAC 59.639 38.462 10.35 5.23 36.83 2.93
3775 6853 6.039159 TGTGTGATGTAGTTCATGAAAGCAAA 59.961 34.615 10.35 0.00 36.83 3.68
3776 6854 5.530543 TGTGTGATGTAGTTCATGAAAGCAA 59.469 36.000 10.35 0.00 36.83 3.91
3777 6855 5.062528 TGTGTGATGTAGTTCATGAAAGCA 58.937 37.500 10.35 9.73 36.83 3.91
3778 6856 5.611796 TGTGTGATGTAGTTCATGAAAGC 57.388 39.130 10.35 4.08 36.83 3.51
3779 6857 7.368480 TCATGTGTGATGTAGTTCATGAAAG 57.632 36.000 10.35 0.00 38.68 2.62
3780 6858 7.926674 ATCATGTGTGATGTAGTTCATGAAA 57.073 32.000 10.35 0.00 43.35 2.69
3781 6859 7.926674 AATCATGTGTGATGTAGTTCATGAA 57.073 32.000 3.38 3.38 44.20 2.57
3782 6860 7.926674 AAATCATGTGTGATGTAGTTCATGA 57.073 32.000 7.84 7.84 44.20 3.07
3785 6863 9.230122 ACATTAAATCATGTGTGATGTAGTTCA 57.770 29.630 0.00 0.00 44.20 3.18
3795 6873 9.897744 ACAGTTTTCTACATTAAATCATGTGTG 57.102 29.630 0.00 0.00 37.93 3.82
3801 6879 9.237187 TGCCATACAGTTTTCTACATTAAATCA 57.763 29.630 0.00 0.00 0.00 2.57
3804 6882 9.853555 CAATGCCATACAGTTTTCTACATTAAA 57.146 29.630 0.00 0.00 0.00 1.52
3805 6883 8.465999 CCAATGCCATACAGTTTTCTACATTAA 58.534 33.333 0.00 0.00 0.00 1.40
3806 6884 7.068103 CCCAATGCCATACAGTTTTCTACATTA 59.932 37.037 0.00 0.00 0.00 1.90
3807 6885 6.127366 CCCAATGCCATACAGTTTTCTACATT 60.127 38.462 0.00 0.00 0.00 2.71
3808 6886 5.360714 CCCAATGCCATACAGTTTTCTACAT 59.639 40.000 0.00 0.00 0.00 2.29
3809 6887 4.704540 CCCAATGCCATACAGTTTTCTACA 59.295 41.667 0.00 0.00 0.00 2.74
3810 6888 4.440112 GCCCAATGCCATACAGTTTTCTAC 60.440 45.833 0.00 0.00 0.00 2.59
3811 6889 3.699038 GCCCAATGCCATACAGTTTTCTA 59.301 43.478 0.00 0.00 0.00 2.10
3812 6890 2.497273 GCCCAATGCCATACAGTTTTCT 59.503 45.455 0.00 0.00 0.00 2.52
3813 6891 2.497273 AGCCCAATGCCATACAGTTTTC 59.503 45.455 0.00 0.00 42.71 2.29
3814 6892 2.539302 AGCCCAATGCCATACAGTTTT 58.461 42.857 0.00 0.00 42.71 2.43
3815 6893 2.236489 AGCCCAATGCCATACAGTTT 57.764 45.000 0.00 0.00 42.71 2.66
3816 6894 3.490348 GATAGCCCAATGCCATACAGTT 58.510 45.455 0.00 0.00 42.71 3.16
3817 6895 2.224867 GGATAGCCCAATGCCATACAGT 60.225 50.000 0.00 0.00 42.71 3.55
3818 6896 2.224843 TGGATAGCCCAATGCCATACAG 60.225 50.000 0.00 0.00 43.29 2.74
3819 6897 1.779700 TGGATAGCCCAATGCCATACA 59.220 47.619 0.00 0.00 43.29 2.29
3820 6898 2.584835 TGGATAGCCCAATGCCATAC 57.415 50.000 0.00 0.00 43.29 2.39
3830 6908 1.510480 GCGCTTGTGATGGATAGCCC 61.510 60.000 0.00 0.00 0.00 5.19
3831 6909 0.533755 AGCGCTTGTGATGGATAGCC 60.534 55.000 2.64 0.00 0.00 3.93
3832 6910 1.303309 AAGCGCTTGTGATGGATAGC 58.697 50.000 24.40 0.00 0.00 2.97
3833 6911 5.679734 ATAAAAGCGCTTGTGATGGATAG 57.320 39.130 25.80 0.00 0.00 2.08
3834 6912 5.733091 GCAATAAAAGCGCTTGTGATGGATA 60.733 40.000 25.80 0.42 0.00 2.59
3835 6913 4.675510 CAATAAAAGCGCTTGTGATGGAT 58.324 39.130 25.80 4.91 0.00 3.41
3836 6914 3.673052 GCAATAAAAGCGCTTGTGATGGA 60.673 43.478 25.80 2.16 0.00 3.41
3837 6915 2.599973 GCAATAAAAGCGCTTGTGATGG 59.400 45.455 25.80 15.30 0.00 3.51
3838 6916 2.599973 GGCAATAAAAGCGCTTGTGATG 59.400 45.455 25.80 20.97 0.00 3.07
3839 6917 2.230992 TGGCAATAAAAGCGCTTGTGAT 59.769 40.909 25.80 14.29 0.00 3.06
3840 6918 1.611006 TGGCAATAAAAGCGCTTGTGA 59.389 42.857 25.80 12.45 0.00 3.58
3841 6919 1.987770 CTGGCAATAAAAGCGCTTGTG 59.012 47.619 25.80 19.30 0.00 3.33
3842 6920 1.885887 TCTGGCAATAAAAGCGCTTGT 59.114 42.857 25.80 22.02 0.00 3.16
3843 6921 2.634982 TCTGGCAATAAAAGCGCTTG 57.365 45.000 25.80 12.98 0.00 4.01
3844 6922 2.352715 GGTTCTGGCAATAAAAGCGCTT 60.353 45.455 18.98 18.98 0.00 4.68
3845 6923 1.202348 GGTTCTGGCAATAAAAGCGCT 59.798 47.619 2.64 2.64 0.00 5.92
3846 6924 1.629013 GGTTCTGGCAATAAAAGCGC 58.371 50.000 0.00 0.00 0.00 5.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.