Multiple sequence alignment - TraesCS2D01G114300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G114300 chr2D 100.000 3401 0 0 1 3401 63561470 63564870 0.000000e+00 6281.0
1 TraesCS2D01G114300 chr2D 91.405 1431 114 7 987 2411 63548607 63547180 0.000000e+00 1953.0
2 TraesCS2D01G114300 chr2D 89.507 1420 142 5 993 2410 63530922 63532336 0.000000e+00 1790.0
3 TraesCS2D01G114300 chr2D 87.347 245 27 4 404 644 63553463 63553707 9.290000e-71 278.0
4 TraesCS2D01G114300 chr2D 90.984 122 6 4 2922 3042 63564276 63564393 3.510000e-35 159.0
5 TraesCS2D01G114300 chr2D 90.984 122 6 4 2807 2924 63564391 63564511 3.510000e-35 159.0
6 TraesCS2D01G114300 chr2A 93.426 2723 127 24 1 2704 65176232 65178921 0.000000e+00 3989.0
7 TraesCS2D01G114300 chr2A 88.385 1765 157 28 672 2411 65091133 65089392 0.000000e+00 2080.0
8 TraesCS2D01G114300 chr2A 89.286 56 6 0 2869 2924 297244165 297244110 1.690000e-08 71.3
9 TraesCS2D01G114300 chr2B 90.096 2302 171 31 404 2684 98432901 98435166 0.000000e+00 2935.0
10 TraesCS2D01G114300 chr2B 92.441 2077 120 16 622 2684 98816946 98818999 0.000000e+00 2931.0
11 TraesCS2D01G114300 chr2B 92.023 2081 117 22 622 2684 99247073 99249122 0.000000e+00 2878.0
12 TraesCS2D01G114300 chr2B 96.026 1510 52 3 999 2506 98914591 98916094 0.000000e+00 2449.0
13 TraesCS2D01G114300 chr2B 91.549 1420 118 2 993 2411 98812200 98810782 0.000000e+00 1956.0
14 TraesCS2D01G114300 chr2B 88.587 184 17 4 592 772 98914412 98914594 1.590000e-53 220.0
15 TraesCS2D01G114300 chr2B 97.222 36 1 0 2990 3025 190193938 190193903 1.020000e-05 62.1
16 TraesCS2D01G114300 chr1A 91.071 224 11 2 2990 3204 562776425 562776202 9.230000e-76 294.0
17 TraesCS2D01G114300 chr1A 94.444 180 8 2 3027 3204 103682395 103682574 3.340000e-70 276.0
18 TraesCS2D01G114300 chr1A 84.091 132 5 3 2710 2840 103682249 103682365 2.770000e-21 113.0
19 TraesCS2D01G114300 chr1A 81.955 133 7 4 2709 2840 562776519 562776403 2.790000e-16 97.1
20 TraesCS2D01G114300 chr1A 92.857 56 4 0 2869 2924 137413268 137413323 7.820000e-12 82.4
21 TraesCS2D01G114300 chr1A 97.143 35 0 1 2922 2956 10746676 10746709 1.320000e-04 58.4
22 TraesCS2D01G114300 chr1A 97.143 35 0 1 2922 2956 137413262 137413295 1.320000e-04 58.4
23 TraesCS2D01G114300 chr1D 90.950 221 11 2 2990 3201 459519838 459519618 4.290000e-74 289.0
24 TraesCS2D01G114300 chr1D 84.496 129 4 3 2713 2840 459519929 459519816 2.770000e-21 113.0
25 TraesCS2D01G114300 chr1D 82.836 134 6 4 2713 2844 36546773 36546891 1.670000e-18 104.0
26 TraesCS2D01G114300 chr1D 82.031 128 7 11 2714 2840 30535994 30536106 1.000000e-15 95.3
27 TraesCS2D01G114300 chr1D 92.857 56 4 0 2869 2924 30536079 30536134 7.820000e-12 82.4
28 TraesCS2D01G114300 chr1D 91.071 56 5 0 2869 2924 459519843 459519788 3.640000e-10 76.8
29 TraesCS2D01G114300 chr1D 97.143 35 0 1 2922 2956 459519849 459519816 1.320000e-04 58.4
30 TraesCS2D01G114300 chr4A 90.583 223 10 4 2990 3203 699937696 699937916 5.550000e-73 285.0
31 TraesCS2D01G114300 chr4D 90.135 223 13 2 2990 3203 7927698 7927920 7.190000e-72 281.0
32 TraesCS2D01G114300 chr4D 93.182 88 4 2 2754 2840 438105492 438105406 9.910000e-26 128.0
33 TraesCS2D01G114300 chr4D 82.258 124 7 6 2713 2835 493331667 493331776 3.610000e-15 93.5
34 TraesCS2D01G114300 chr4D 97.143 35 0 1 2922 2956 438105439 438105406 1.320000e-04 58.4
35 TraesCS2D01G114300 chr5D 94.972 179 8 1 3027 3204 481803949 481804127 2.580000e-71 279.0
36 TraesCS2D01G114300 chr5B 89.732 224 13 3 2990 3204 477613103 477613325 9.290000e-71 278.0
37 TraesCS2D01G114300 chr5B 82.946 129 6 3 2713 2840 467949438 467949551 6.000000e-18 102.0
38 TraesCS2D01G114300 chr5A 89.286 224 15 2 2990 3204 561672614 561672391 4.320000e-69 272.0
39 TraesCS2D01G114300 chr5A 88.839 224 16 5 2990 3204 385416303 385416080 2.010000e-67 267.0
40 TraesCS2D01G114300 chr5A 79.845 129 10 3 2713 2840 385416394 385416281 2.810000e-11 80.5
41 TraesCS2D01G114300 chr6A 89.286 224 13 4 2990 3204 597862982 597863203 1.560000e-68 270.0
42 TraesCS2D01G114300 chr6A 97.143 35 0 1 2922 2956 222490879 222490912 1.320000e-04 58.4
43 TraesCS2D01G114300 chr6D 93.902 82 3 2 2760 2840 379567865 379567945 4.610000e-24 122.0
44 TraesCS2D01G114300 chr6D 92.857 56 4 0 2869 2924 379567918 379567973 7.820000e-12 82.4
45 TraesCS2D01G114300 chr6D 97.143 35 0 1 2922 2956 379567912 379567945 1.320000e-04 58.4
46 TraesCS2D01G114300 chr3B 94.643 56 3 0 2869 2924 602243004 602242949 1.680000e-13 87.9
47 TraesCS2D01G114300 chr3B 92.308 39 3 0 65 103 563648575 563648537 4.740000e-04 56.5
48 TraesCS2D01G114300 chr1B 79.845 129 10 9 2713 2840 340474082 340474195 2.810000e-11 80.5
49 TraesCS2D01G114300 chr6B 91.071 56 5 0 2869 2924 524969539 524969484 3.640000e-10 76.8
50 TraesCS2D01G114300 chr6B 97.143 35 0 1 2922 2956 524969545 524969512 1.320000e-04 58.4
51 TraesCS2D01G114300 chr4B 84.286 70 9 2 37 105 179873296 179873364 2.190000e-07 67.6
52 TraesCS2D01G114300 chr3A 97.143 35 0 1 2922 2956 454160966 454160999 1.320000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G114300 chr2D 63561470 63564870 3400 False 2199.666667 6281 93.989333 1 3401 3 chr2D.!!$F3 3400
1 TraesCS2D01G114300 chr2D 63547180 63548607 1427 True 1953.000000 1953 91.405000 987 2411 1 chr2D.!!$R1 1424
2 TraesCS2D01G114300 chr2D 63530922 63532336 1414 False 1790.000000 1790 89.507000 993 2410 1 chr2D.!!$F1 1417
3 TraesCS2D01G114300 chr2A 65176232 65178921 2689 False 3989.000000 3989 93.426000 1 2704 1 chr2A.!!$F1 2703
4 TraesCS2D01G114300 chr2A 65089392 65091133 1741 True 2080.000000 2080 88.385000 672 2411 1 chr2A.!!$R1 1739
5 TraesCS2D01G114300 chr2B 98432901 98435166 2265 False 2935.000000 2935 90.096000 404 2684 1 chr2B.!!$F1 2280
6 TraesCS2D01G114300 chr2B 98816946 98818999 2053 False 2931.000000 2931 92.441000 622 2684 1 chr2B.!!$F2 2062
7 TraesCS2D01G114300 chr2B 99247073 99249122 2049 False 2878.000000 2878 92.023000 622 2684 1 chr2B.!!$F3 2062
8 TraesCS2D01G114300 chr2B 98810782 98812200 1418 True 1956.000000 1956 91.549000 993 2411 1 chr2B.!!$R1 1418
9 TraesCS2D01G114300 chr2B 98914412 98916094 1682 False 1334.500000 2449 92.306500 592 2506 2 chr2B.!!$F4 1914

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
167 168 1.134075 GCACAACGATGCAGCAGAG 59.866 57.895 1.53 0.0 45.39 3.35 F
859 899 1.545428 GCAAACCCAGACAGATCACCA 60.545 52.381 0.00 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1585 1639 4.286320 GTCGCGCTCGGGGATCAT 62.286 66.667 5.56 0.0 40.03 2.45 R
2618 2684 0.447801 CTTCGAATGGGCCGACTTTG 59.552 55.000 0.00 0.0 35.61 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 2.414594 GCAATTGCGGCATCTCCC 59.585 61.111 15.87 0.00 0.00 4.30
102 103 4.767255 CTGACCACCGGCTCCAGC 62.767 72.222 0.00 0.00 41.14 4.85
163 164 3.372676 CTCCGCACAACGATGCAGC 62.373 63.158 10.70 0.00 46.47 5.25
164 165 3.725459 CCGCACAACGATGCAGCA 61.725 61.111 1.53 0.00 46.47 4.41
165 166 2.202260 CGCACAACGATGCAGCAG 60.202 61.111 1.53 0.00 46.47 4.24
166 167 2.670210 CGCACAACGATGCAGCAGA 61.670 57.895 1.53 0.00 46.47 4.26
167 168 1.134075 GCACAACGATGCAGCAGAG 59.866 57.895 1.53 0.00 45.39 3.35
168 169 1.134075 CACAACGATGCAGCAGAGC 59.866 57.895 1.53 0.00 0.00 4.09
169 170 2.037136 ACAACGATGCAGCAGAGCC 61.037 57.895 1.53 0.00 0.00 4.70
170 171 1.744368 CAACGATGCAGCAGAGCCT 60.744 57.895 1.53 0.00 0.00 4.58
171 172 1.744368 AACGATGCAGCAGAGCCTG 60.744 57.895 1.53 0.00 35.93 4.85
172 173 2.125229 CGATGCAGCAGAGCCTGT 60.125 61.111 1.53 0.00 35.28 4.00
173 174 2.461945 CGATGCAGCAGAGCCTGTG 61.462 63.158 1.53 0.00 35.28 3.66
213 214 3.499737 GACCCCAATGCTGTCGCG 61.500 66.667 0.00 0.00 39.65 5.87
279 280 2.270257 GCTTGCCACCATGCAGTGA 61.270 57.895 7.62 0.00 43.21 3.41
284 285 2.382746 CCACCATGCAGTGACGACG 61.383 63.158 7.62 0.00 40.34 5.12
295 296 2.621998 CAGTGACGACGATAAGGGGTAT 59.378 50.000 0.00 0.00 0.00 2.73
320 321 3.127533 CCAAAGGCGGGCTCTTCG 61.128 66.667 3.91 0.00 0.00 3.79
480 482 9.811995 TGTGAATAGTACATGTGGTAGAAATAC 57.188 33.333 9.11 0.00 31.13 1.89
484 486 5.657474 AGTACATGTGGTAGAAATACGTGG 58.343 41.667 9.11 0.00 36.04 4.94
496 498 7.863877 GGTAGAAATACGTGGTTTTGTCATTTT 59.136 33.333 0.00 0.00 0.00 1.82
557 561 8.126700 ACTTTGCAAACAAATAGTAGTACACAC 58.873 33.333 8.05 0.00 44.54 3.82
632 638 4.523943 AGCATGCTCCTGTAACAAAAATGA 59.476 37.500 16.30 0.00 0.00 2.57
677 684 1.738099 ACACAGCCATCTCGAACGC 60.738 57.895 0.00 0.00 0.00 4.84
772 780 4.891727 ATGACGACGCCGCCCATC 62.892 66.667 0.00 0.00 39.95 3.51
851 884 1.971167 GCCATCGCAAACCCAGACA 60.971 57.895 0.00 0.00 34.03 3.41
859 899 1.545428 GCAAACCCAGACAGATCACCA 60.545 52.381 0.00 0.00 0.00 4.17
902 946 3.564644 CCGAAGTCCGTAGTAGATCACAT 59.435 47.826 0.00 0.00 36.31 3.21
903 947 4.319622 CCGAAGTCCGTAGTAGATCACATC 60.320 50.000 0.00 0.00 36.31 3.06
904 948 4.272748 CGAAGTCCGTAGTAGATCACATCA 59.727 45.833 0.00 0.00 0.00 3.07
905 949 5.502153 AAGTCCGTAGTAGATCACATCAC 57.498 43.478 0.00 0.00 0.00 3.06
906 950 4.524053 AGTCCGTAGTAGATCACATCACA 58.476 43.478 0.00 0.00 0.00 3.58
907 951 4.335874 AGTCCGTAGTAGATCACATCACAC 59.664 45.833 0.00 0.00 0.00 3.82
908 952 4.335874 GTCCGTAGTAGATCACATCACACT 59.664 45.833 0.00 0.00 33.29 3.55
1293 1347 2.045045 CTCATGCCGGCCCTCAAA 60.045 61.111 26.77 3.54 0.00 2.69
1510 1564 4.736896 GCGCCTTCCCGTTCGAGT 62.737 66.667 0.00 0.00 0.00 4.18
2441 2501 3.512033 TTTTTCTGTGTTTCCAACGGG 57.488 42.857 0.00 0.00 0.00 5.28
2470 2534 6.038356 GTCGAGAATAAATAAACAGTCGGGA 58.962 40.000 0.00 0.00 0.00 5.14
2553 2618 1.317431 TGTACATACGCTCGGGCTGT 61.317 55.000 5.36 5.68 36.09 4.40
2572 2637 2.087646 GTCCGGACTACTAGTTTCGGT 58.912 52.381 27.64 2.87 42.10 4.69
2590 2655 5.073311 TCGGTCTTTCCAGATTGAACTAG 57.927 43.478 0.00 0.00 35.57 2.57
2617 2683 3.638627 AGCCTTTTCAGTTTCCTTCAAGG 59.361 43.478 0.00 0.00 36.46 3.61
2618 2684 3.800261 GCCTTTTCAGTTTCCTTCAAGGC 60.800 47.826 0.00 4.36 34.61 4.35
2622 2688 4.654091 TTCAGTTTCCTTCAAGGCAAAG 57.346 40.909 0.00 0.00 34.61 2.77
2635 2701 2.038269 GCAAAGTCGGCCCATTCGA 61.038 57.895 0.00 0.00 0.00 3.71
2650 2716 5.095490 CCCATTCGAAGAAATAACAACAGC 58.905 41.667 3.35 0.00 45.90 4.40
2656 2722 5.122239 TCGAAGAAATAACAACAGCCTGATG 59.878 40.000 0.00 0.00 0.00 3.07
2704 2771 2.042435 CGGCCTCCTCCTCTTCCT 60.042 66.667 0.00 0.00 0.00 3.36
2705 2772 1.687493 CGGCCTCCTCCTCTTCCTT 60.687 63.158 0.00 0.00 0.00 3.36
2706 2773 1.911471 GGCCTCCTCCTCTTCCTTG 59.089 63.158 0.00 0.00 0.00 3.61
2707 2774 1.631071 GGCCTCCTCCTCTTCCTTGG 61.631 65.000 0.00 0.00 0.00 3.61
2708 2775 0.618968 GCCTCCTCCTCTTCCTTGGA 60.619 60.000 0.00 0.00 0.00 3.53
2709 2776 1.958288 CCTCCTCCTCTTCCTTGGAA 58.042 55.000 1.86 1.86 31.23 3.53
2710 2777 1.557371 CCTCCTCCTCTTCCTTGGAAC 59.443 57.143 0.00 0.00 31.23 3.62
2711 2778 2.545810 CTCCTCCTCTTCCTTGGAACT 58.454 52.381 0.00 0.00 31.23 3.01
2712 2779 2.235898 CTCCTCCTCTTCCTTGGAACTG 59.764 54.545 0.00 0.00 31.23 3.16
2713 2780 1.280421 CCTCCTCTTCCTTGGAACTGG 59.720 57.143 0.00 4.19 31.23 4.00
2714 2781 2.260822 CTCCTCTTCCTTGGAACTGGA 58.739 52.381 13.99 13.99 31.23 3.86
2715 2782 2.639839 CTCCTCTTCCTTGGAACTGGAA 59.360 50.000 14.95 0.00 38.72 3.53
2716 2783 2.372172 TCCTCTTCCTTGGAACTGGAAC 59.628 50.000 12.95 0.00 36.93 3.62
2717 2784 2.373502 CCTCTTCCTTGGAACTGGAACT 59.626 50.000 0.00 0.00 36.93 3.01
2718 2785 3.406764 CTCTTCCTTGGAACTGGAACTG 58.593 50.000 0.00 0.00 36.93 3.16
2719 2786 2.106511 TCTTCCTTGGAACTGGAACTGG 59.893 50.000 0.00 0.00 36.93 4.00
2720 2787 1.814429 TCCTTGGAACTGGAACTGGA 58.186 50.000 0.00 0.00 0.00 3.86
2721 2788 2.348472 TCCTTGGAACTGGAACTGGAT 58.652 47.619 0.00 0.00 0.00 3.41
2722 2789 2.305927 TCCTTGGAACTGGAACTGGATC 59.694 50.000 0.00 0.00 0.00 3.36
2723 2790 2.619074 CCTTGGAACTGGAACTGGATCC 60.619 54.545 4.20 4.20 40.10 3.36
2724 2791 2.044793 TGGAACTGGAACTGGATCCT 57.955 50.000 14.23 0.00 40.35 3.24
2725 2792 1.909302 TGGAACTGGAACTGGATCCTC 59.091 52.381 14.23 1.71 40.35 3.71
2726 2793 2.192263 GGAACTGGAACTGGATCCTCT 58.808 52.381 14.23 0.00 40.35 3.69
2727 2794 3.245984 TGGAACTGGAACTGGATCCTCTA 60.246 47.826 14.23 0.00 40.35 2.43
2728 2795 3.775316 GGAACTGGAACTGGATCCTCTAA 59.225 47.826 14.23 0.00 40.35 2.10
2729 2796 4.383226 GGAACTGGAACTGGATCCTCTAAC 60.383 50.000 14.23 1.36 40.35 2.34
2730 2797 3.791320 ACTGGAACTGGATCCTCTAACA 58.209 45.455 14.23 6.11 40.35 2.41
2731 2798 4.366267 ACTGGAACTGGATCCTCTAACAT 58.634 43.478 14.23 0.00 40.35 2.71
2732 2799 5.529289 ACTGGAACTGGATCCTCTAACATA 58.471 41.667 14.23 0.00 40.35 2.29
2733 2800 5.364157 ACTGGAACTGGATCCTCTAACATAC 59.636 44.000 14.23 0.00 40.35 2.39
2734 2801 5.277250 TGGAACTGGATCCTCTAACATACA 58.723 41.667 14.23 0.00 40.35 2.29
2735 2802 5.128827 TGGAACTGGATCCTCTAACATACAC 59.871 44.000 14.23 0.00 40.35 2.90
2736 2803 5.128827 GGAACTGGATCCTCTAACATACACA 59.871 44.000 14.23 0.00 36.50 3.72
2737 2804 6.351881 GGAACTGGATCCTCTAACATACACAA 60.352 42.308 14.23 0.00 36.50 3.33
2738 2805 6.227298 ACTGGATCCTCTAACATACACAAG 57.773 41.667 14.23 0.00 0.00 3.16
2739 2806 5.129485 ACTGGATCCTCTAACATACACAAGG 59.871 44.000 14.23 0.00 0.00 3.61
2740 2807 5.277250 TGGATCCTCTAACATACACAAGGA 58.723 41.667 14.23 0.00 37.33 3.36
2741 2808 5.724370 TGGATCCTCTAACATACACAAGGAA 59.276 40.000 14.23 0.00 36.56 3.36
2742 2809 6.386927 TGGATCCTCTAACATACACAAGGAAT 59.613 38.462 14.23 0.00 36.56 3.01
2743 2810 6.708054 GGATCCTCTAACATACACAAGGAATG 59.292 42.308 3.84 0.00 36.56 2.67
2744 2811 6.620877 TCCTCTAACATACACAAGGAATGT 57.379 37.500 0.00 0.00 45.34 2.71
2745 2812 7.016153 TCCTCTAACATACACAAGGAATGTT 57.984 36.000 5.39 5.39 41.46 2.71
2746 2813 8.141298 TCCTCTAACATACACAAGGAATGTTA 57.859 34.615 6.88 6.88 41.46 2.41
2752 2819 8.553459 AACATACACAAGGAATGTTAGAGAAG 57.447 34.615 0.00 0.00 41.46 2.85
2753 2820 7.106239 ACATACACAAGGAATGTTAGAGAAGG 58.894 38.462 0.00 0.00 41.46 3.46
2754 2821 4.911390 ACACAAGGAATGTTAGAGAAGGG 58.089 43.478 0.00 0.00 41.46 3.95
2755 2822 4.597507 ACACAAGGAATGTTAGAGAAGGGA 59.402 41.667 0.00 0.00 41.46 4.20
2756 2823 5.251700 ACACAAGGAATGTTAGAGAAGGGAT 59.748 40.000 0.00 0.00 41.46 3.85
2757 2824 6.443849 ACACAAGGAATGTTAGAGAAGGGATA 59.556 38.462 0.00 0.00 41.46 2.59
2758 2825 7.127955 ACACAAGGAATGTTAGAGAAGGGATAT 59.872 37.037 0.00 0.00 41.46 1.63
2759 2826 7.995488 CACAAGGAATGTTAGAGAAGGGATATT 59.005 37.037 0.00 0.00 41.46 1.28
2760 2827 9.225682 ACAAGGAATGTTAGAGAAGGGATATTA 57.774 33.333 0.00 0.00 40.06 0.98
2761 2828 9.717942 CAAGGAATGTTAGAGAAGGGATATTAG 57.282 37.037 0.00 0.00 0.00 1.73
2762 2829 9.676129 AAGGAATGTTAGAGAAGGGATATTAGA 57.324 33.333 0.00 0.00 0.00 2.10
2763 2830 9.676129 AGGAATGTTAGAGAAGGGATATTAGAA 57.324 33.333 0.00 0.00 0.00 2.10
2767 2834 9.785982 ATGTTAGAGAAGGGATATTAGAAAAGC 57.214 33.333 0.00 0.00 0.00 3.51
2768 2835 8.993424 TGTTAGAGAAGGGATATTAGAAAAGCT 58.007 33.333 0.00 0.00 0.00 3.74
2771 2838 8.554490 AGAGAAGGGATATTAGAAAAGCTACA 57.446 34.615 0.00 0.00 0.00 2.74
2772 2839 8.646900 AGAGAAGGGATATTAGAAAAGCTACAG 58.353 37.037 0.00 0.00 0.00 2.74
2773 2840 8.325477 AGAAGGGATATTAGAAAAGCTACAGT 57.675 34.615 0.00 0.00 0.00 3.55
2774 2841 9.435570 AGAAGGGATATTAGAAAAGCTACAGTA 57.564 33.333 0.00 0.00 0.00 2.74
2775 2842 9.478768 GAAGGGATATTAGAAAAGCTACAGTAC 57.521 37.037 0.00 0.00 0.00 2.73
2776 2843 7.964624 AGGGATATTAGAAAAGCTACAGTACC 58.035 38.462 0.00 0.00 0.00 3.34
2777 2844 7.016366 AGGGATATTAGAAAAGCTACAGTACCC 59.984 40.741 0.00 0.00 0.00 3.69
2778 2845 7.016366 GGGATATTAGAAAAGCTACAGTACCCT 59.984 40.741 0.00 0.00 0.00 4.34
2779 2846 9.086758 GGATATTAGAAAAGCTACAGTACCCTA 57.913 37.037 0.00 0.00 0.00 3.53
2782 2849 7.787623 TTAGAAAAGCTACAGTACCCTAACT 57.212 36.000 0.00 0.00 0.00 2.24
2783 2850 6.683312 AGAAAAGCTACAGTACCCTAACTT 57.317 37.500 0.00 0.00 0.00 2.66
2784 2851 6.699366 AGAAAAGCTACAGTACCCTAACTTC 58.301 40.000 0.00 0.00 0.00 3.01
2785 2852 5.417754 AAAGCTACAGTACCCTAACTTCC 57.582 43.478 0.00 0.00 0.00 3.46
2786 2853 3.372897 AGCTACAGTACCCTAACTTCCC 58.627 50.000 0.00 0.00 0.00 3.97
2787 2854 3.012616 AGCTACAGTACCCTAACTTCCCT 59.987 47.826 0.00 0.00 0.00 4.20
2788 2855 3.773667 GCTACAGTACCCTAACTTCCCTT 59.226 47.826 0.00 0.00 0.00 3.95
2789 2856 4.141981 GCTACAGTACCCTAACTTCCCTTC 60.142 50.000 0.00 0.00 0.00 3.46
2790 2857 4.143406 ACAGTACCCTAACTTCCCTTCT 57.857 45.455 0.00 0.00 0.00 2.85
2791 2858 5.280998 ACAGTACCCTAACTTCCCTTCTA 57.719 43.478 0.00 0.00 0.00 2.10
2792 2859 5.851418 ACAGTACCCTAACTTCCCTTCTAT 58.149 41.667 0.00 0.00 0.00 1.98
2793 2860 6.269974 ACAGTACCCTAACTTCCCTTCTATT 58.730 40.000 0.00 0.00 0.00 1.73
2794 2861 7.425003 ACAGTACCCTAACTTCCCTTCTATTA 58.575 38.462 0.00 0.00 0.00 0.98
2795 2862 7.902941 ACAGTACCCTAACTTCCCTTCTATTAA 59.097 37.037 0.00 0.00 0.00 1.40
2796 2863 8.935741 CAGTACCCTAACTTCCCTTCTATTAAT 58.064 37.037 0.00 0.00 0.00 1.40
2797 2864 9.156940 AGTACCCTAACTTCCCTTCTATTAATC 57.843 37.037 0.00 0.00 0.00 1.75
2798 2865 7.390013 ACCCTAACTTCCCTTCTATTAATCC 57.610 40.000 0.00 0.00 0.00 3.01
2799 2866 6.912561 ACCCTAACTTCCCTTCTATTAATCCA 59.087 38.462 0.00 0.00 0.00 3.41
2800 2867 7.576649 ACCCTAACTTCCCTTCTATTAATCCAT 59.423 37.037 0.00 0.00 0.00 3.41
2801 2868 9.112658 CCCTAACTTCCCTTCTATTAATCCATA 57.887 37.037 0.00 0.00 0.00 2.74
2802 2869 9.945904 CCTAACTTCCCTTCTATTAATCCATAC 57.054 37.037 0.00 0.00 0.00 2.39
2820 2887 9.646522 AATCCATACAATTAAGGCTGAATAACT 57.353 29.630 0.00 0.00 0.00 2.24
2821 2888 9.646522 ATCCATACAATTAAGGCTGAATAACTT 57.353 29.630 0.00 0.00 0.00 2.66
2865 2932 9.729281 TTATGGTTTAGTGTTTAGAGTTTAGGG 57.271 33.333 0.00 0.00 0.00 3.53
2866 2933 7.140522 TGGTTTAGTGTTTAGAGTTTAGGGT 57.859 36.000 0.00 0.00 0.00 4.34
2867 2934 6.993902 TGGTTTAGTGTTTAGAGTTTAGGGTG 59.006 38.462 0.00 0.00 0.00 4.61
2868 2935 6.994496 GGTTTAGTGTTTAGAGTTTAGGGTGT 59.006 38.462 0.00 0.00 0.00 4.16
2869 2936 8.150296 GGTTTAGTGTTTAGAGTTTAGGGTGTA 58.850 37.037 0.00 0.00 0.00 2.90
2870 2937 9.546428 GTTTAGTGTTTAGAGTTTAGGGTGTAA 57.454 33.333 0.00 0.00 0.00 2.41
2871 2938 9.768662 TTTAGTGTTTAGAGTTTAGGGTGTAAG 57.231 33.333 0.00 0.00 0.00 2.34
2872 2939 7.607615 AGTGTTTAGAGTTTAGGGTGTAAGA 57.392 36.000 0.00 0.00 0.00 2.10
2873 2940 8.203681 AGTGTTTAGAGTTTAGGGTGTAAGAT 57.796 34.615 0.00 0.00 0.00 2.40
2874 2941 9.317827 AGTGTTTAGAGTTTAGGGTGTAAGATA 57.682 33.333 0.00 0.00 0.00 1.98
2875 2942 9.933723 GTGTTTAGAGTTTAGGGTGTAAGATAA 57.066 33.333 0.00 0.00 0.00 1.75
2876 2943 9.933723 TGTTTAGAGTTTAGGGTGTAAGATAAC 57.066 33.333 0.00 0.00 0.00 1.89
2981 3048 9.703677 TTATGGTTTAGGGTTTAGAATTTAGGG 57.296 33.333 0.00 0.00 0.00 3.53
2982 3049 7.106204 TGGTTTAGGGTTTAGAATTTAGGGT 57.894 36.000 0.00 0.00 0.00 4.34
2983 3050 6.949463 TGGTTTAGGGTTTAGAATTTAGGGTG 59.051 38.462 0.00 0.00 0.00 4.61
2984 3051 6.950041 GGTTTAGGGTTTAGAATTTAGGGTGT 59.050 38.462 0.00 0.00 0.00 4.16
2985 3052 8.108999 GGTTTAGGGTTTAGAATTTAGGGTGTA 58.891 37.037 0.00 0.00 0.00 2.90
2986 3053 9.519191 GTTTAGGGTTTAGAATTTAGGGTGTAA 57.481 33.333 0.00 0.00 0.00 2.41
2987 3054 9.743581 TTTAGGGTTTAGAATTTAGGGTGTAAG 57.256 33.333 0.00 0.00 0.00 2.34
2988 3055 6.728411 AGGGTTTAGAATTTAGGGTGTAAGG 58.272 40.000 0.00 0.00 0.00 2.69
2989 3056 6.276330 AGGGTTTAGAATTTAGGGTGTAAGGT 59.724 38.462 0.00 0.00 0.00 3.50
2990 3057 7.462006 AGGGTTTAGAATTTAGGGTGTAAGGTA 59.538 37.037 0.00 0.00 0.00 3.08
2991 3058 8.108999 GGGTTTAGAATTTAGGGTGTAAGGTAA 58.891 37.037 0.00 0.00 0.00 2.85
2992 3059 8.950210 GGTTTAGAATTTAGGGTGTAAGGTAAC 58.050 37.037 0.00 0.00 0.00 2.50
3125 3192 8.975663 AAAGTAAATAACCTGCTAATAGTCCC 57.024 34.615 0.00 0.00 0.00 4.46
3126 3193 7.932683 AGTAAATAACCTGCTAATAGTCCCT 57.067 36.000 0.00 0.00 0.00 4.20
3127 3194 9.443365 AAGTAAATAACCTGCTAATAGTCCCTA 57.557 33.333 0.00 0.00 0.00 3.53
3128 3195 9.443365 AGTAAATAACCTGCTAATAGTCCCTAA 57.557 33.333 0.00 0.00 0.00 2.69
3129 3196 9.486497 GTAAATAACCTGCTAATAGTCCCTAAC 57.514 37.037 0.00 0.00 0.00 2.34
3130 3197 7.685849 AATAACCTGCTAATAGTCCCTAACA 57.314 36.000 0.00 0.00 0.00 2.41
3131 3198 7.873699 ATAACCTGCTAATAGTCCCTAACAT 57.126 36.000 0.00 0.00 0.00 2.71
3132 3199 6.576778 AACCTGCTAATAGTCCCTAACATT 57.423 37.500 0.00 0.00 0.00 2.71
3133 3200 6.176014 ACCTGCTAATAGTCCCTAACATTC 57.824 41.667 0.00 0.00 0.00 2.67
3134 3201 5.071923 ACCTGCTAATAGTCCCTAACATTCC 59.928 44.000 0.00 0.00 0.00 3.01
3135 3202 5.308237 CCTGCTAATAGTCCCTAACATTCCT 59.692 44.000 0.00 0.00 0.00 3.36
3136 3203 6.183361 CCTGCTAATAGTCCCTAACATTCCTT 60.183 42.308 0.00 0.00 0.00 3.36
3137 3204 7.208064 TGCTAATAGTCCCTAACATTCCTTT 57.792 36.000 0.00 0.00 0.00 3.11
3138 3205 7.639378 TGCTAATAGTCCCTAACATTCCTTTT 58.361 34.615 0.00 0.00 0.00 2.27
3139 3206 7.773690 TGCTAATAGTCCCTAACATTCCTTTTC 59.226 37.037 0.00 0.00 0.00 2.29
3140 3207 7.773690 GCTAATAGTCCCTAACATTCCTTTTCA 59.226 37.037 0.00 0.00 0.00 2.69
3141 3208 9.853177 CTAATAGTCCCTAACATTCCTTTTCAT 57.147 33.333 0.00 0.00 0.00 2.57
3143 3210 9.547279 AATAGTCCCTAACATTCCTTTTCATTT 57.453 29.630 0.00 0.00 0.00 2.32
3144 3211 7.855784 AGTCCCTAACATTCCTTTTCATTTT 57.144 32.000 0.00 0.00 0.00 1.82
3145 3212 8.950007 AGTCCCTAACATTCCTTTTCATTTTA 57.050 30.769 0.00 0.00 0.00 1.52
3146 3213 8.803235 AGTCCCTAACATTCCTTTTCATTTTAC 58.197 33.333 0.00 0.00 0.00 2.01
3147 3214 8.581578 GTCCCTAACATTCCTTTTCATTTTACA 58.418 33.333 0.00 0.00 0.00 2.41
3148 3215 8.581578 TCCCTAACATTCCTTTTCATTTTACAC 58.418 33.333 0.00 0.00 0.00 2.90
3149 3216 8.585018 CCCTAACATTCCTTTTCATTTTACACT 58.415 33.333 0.00 0.00 0.00 3.55
3154 3221 8.504005 ACATTCCTTTTCATTTTACACTAGACG 58.496 33.333 0.00 0.00 0.00 4.18
3155 3222 8.717821 CATTCCTTTTCATTTTACACTAGACGA 58.282 33.333 0.00 0.00 0.00 4.20
3156 3223 7.884816 TCCTTTTCATTTTACACTAGACGAG 57.115 36.000 0.00 0.00 0.00 4.18
3157 3224 6.367969 TCCTTTTCATTTTACACTAGACGAGC 59.632 38.462 0.00 0.00 0.00 5.03
3158 3225 6.369065 CCTTTTCATTTTACACTAGACGAGCT 59.631 38.462 0.00 0.00 0.00 4.09
3159 3226 6.946229 TTTCATTTTACACTAGACGAGCTC 57.054 37.500 2.73 2.73 0.00 4.09
3160 3227 5.899120 TCATTTTACACTAGACGAGCTCT 57.101 39.130 12.85 0.00 0.00 4.09
3161 3228 5.641709 TCATTTTACACTAGACGAGCTCTG 58.358 41.667 12.85 8.06 0.00 3.35
3162 3229 5.183331 TCATTTTACACTAGACGAGCTCTGT 59.817 40.000 12.85 11.43 0.00 3.41
3163 3230 6.373495 TCATTTTACACTAGACGAGCTCTGTA 59.627 38.462 12.85 9.49 0.00 2.74
3164 3231 5.798015 TTTACACTAGACGAGCTCTGTAG 57.202 43.478 12.85 12.72 0.00 2.74
3178 3245 3.321497 CTCTGTAGCACTGTGACTTTCC 58.679 50.000 12.86 0.00 0.00 3.13
3179 3246 2.965831 TCTGTAGCACTGTGACTTTCCT 59.034 45.455 12.86 0.16 0.00 3.36
3180 3247 3.388024 TCTGTAGCACTGTGACTTTCCTT 59.612 43.478 12.86 0.00 0.00 3.36
3181 3248 3.728845 TGTAGCACTGTGACTTTCCTTC 58.271 45.455 12.86 0.00 0.00 3.46
3182 3249 3.388024 TGTAGCACTGTGACTTTCCTTCT 59.612 43.478 12.86 0.00 0.00 2.85
3183 3250 3.118905 AGCACTGTGACTTTCCTTCTC 57.881 47.619 12.86 0.00 0.00 2.87
3184 3251 2.703007 AGCACTGTGACTTTCCTTCTCT 59.297 45.455 12.86 0.00 0.00 3.10
3185 3252 3.898123 AGCACTGTGACTTTCCTTCTCTA 59.102 43.478 12.86 0.00 0.00 2.43
3186 3253 4.345257 AGCACTGTGACTTTCCTTCTCTAA 59.655 41.667 12.86 0.00 0.00 2.10
3187 3254 4.688413 GCACTGTGACTTTCCTTCTCTAAG 59.312 45.833 12.86 0.00 0.00 2.18
3188 3255 5.740513 GCACTGTGACTTTCCTTCTCTAAGT 60.741 44.000 12.86 0.00 34.97 2.24
3189 3256 6.284459 CACTGTGACTTTCCTTCTCTAAGTT 58.716 40.000 0.32 0.00 32.58 2.66
3190 3257 7.434492 CACTGTGACTTTCCTTCTCTAAGTTA 58.566 38.462 0.32 0.00 32.58 2.24
3191 3258 7.596995 CACTGTGACTTTCCTTCTCTAAGTTAG 59.403 40.741 0.32 3.29 32.58 2.34
3192 3259 7.506261 ACTGTGACTTTCCTTCTCTAAGTTAGA 59.494 37.037 12.05 12.05 32.58 2.10
3201 3268 3.926821 CTCTAAGTTAGAGGATCCGGC 57.073 52.381 26.21 2.53 46.70 6.13
3202 3269 3.492337 CTCTAAGTTAGAGGATCCGGCT 58.508 50.000 26.21 10.63 46.70 5.52
3203 3270 3.488363 TCTAAGTTAGAGGATCCGGCTC 58.512 50.000 8.59 0.00 33.66 4.70
3204 3271 1.033574 AAGTTAGAGGATCCGGCTCG 58.966 55.000 12.66 0.00 33.66 5.03
3205 3272 1.007154 GTTAGAGGATCCGGCTCGC 60.007 63.158 12.66 5.00 33.66 5.03
3206 3273 1.152735 TTAGAGGATCCGGCTCGCT 60.153 57.895 12.66 0.00 33.66 4.93
3207 3274 1.173444 TTAGAGGATCCGGCTCGCTC 61.173 60.000 12.66 12.99 33.66 5.03
3208 3275 2.058125 TAGAGGATCCGGCTCGCTCT 62.058 60.000 21.89 21.89 33.66 4.09
3209 3276 2.443016 AGGATCCGGCTCGCTCTT 60.443 61.111 5.98 0.00 0.00 2.85
3210 3277 2.028337 GGATCCGGCTCGCTCTTC 59.972 66.667 0.00 0.00 0.00 2.87
3211 3278 2.028337 GATCCGGCTCGCTCTTCC 59.972 66.667 0.00 0.00 0.00 3.46
3212 3279 2.443016 ATCCGGCTCGCTCTTCCT 60.443 61.111 0.00 0.00 0.00 3.36
3213 3280 2.414840 GATCCGGCTCGCTCTTCCTC 62.415 65.000 0.00 0.00 0.00 3.71
3214 3281 3.452786 CCGGCTCGCTCTTCCTCA 61.453 66.667 0.00 0.00 0.00 3.86
3215 3282 2.103934 CGGCTCGCTCTTCCTCAG 59.896 66.667 0.00 0.00 0.00 3.35
3216 3283 2.202864 GGCTCGCTCTTCCTCAGC 60.203 66.667 0.00 0.00 0.00 4.26
3217 3284 2.202864 GCTCGCTCTTCCTCAGCC 60.203 66.667 0.00 0.00 32.83 4.85
3218 3285 3.011635 GCTCGCTCTTCCTCAGCCA 62.012 63.158 0.00 0.00 32.83 4.75
3219 3286 1.153667 CTCGCTCTTCCTCAGCCAC 60.154 63.158 0.00 0.00 32.83 5.01
3220 3287 2.125350 CGCTCTTCCTCAGCCACC 60.125 66.667 0.00 0.00 32.83 4.61
3221 3288 2.654079 CGCTCTTCCTCAGCCACCT 61.654 63.158 0.00 0.00 32.83 4.00
3222 3289 1.220477 GCTCTTCCTCAGCCACCTC 59.780 63.158 0.00 0.00 0.00 3.85
3223 3290 1.904032 CTCTTCCTCAGCCACCTCC 59.096 63.158 0.00 0.00 0.00 4.30
3224 3291 0.617249 CTCTTCCTCAGCCACCTCCT 60.617 60.000 0.00 0.00 0.00 3.69
3225 3292 0.178891 TCTTCCTCAGCCACCTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
3226 3293 0.251634 CTTCCTCAGCCACCTCCTTC 59.748 60.000 0.00 0.00 0.00 3.46
3227 3294 0.178891 TTCCTCAGCCACCTCCTTCT 60.179 55.000 0.00 0.00 0.00 2.85
3228 3295 0.616111 TCCTCAGCCACCTCCTTCTC 60.616 60.000 0.00 0.00 0.00 2.87
3229 3296 0.617249 CCTCAGCCACCTCCTTCTCT 60.617 60.000 0.00 0.00 0.00 3.10
3230 3297 1.274712 CTCAGCCACCTCCTTCTCTT 58.725 55.000 0.00 0.00 0.00 2.85
3231 3298 1.206849 CTCAGCCACCTCCTTCTCTTC 59.793 57.143 0.00 0.00 0.00 2.87
3232 3299 0.108424 CAGCCACCTCCTTCTCTTCG 60.108 60.000 0.00 0.00 0.00 3.79
3233 3300 1.219393 GCCACCTCCTTCTCTTCGG 59.781 63.158 0.00 0.00 0.00 4.30
3234 3301 1.545706 GCCACCTCCTTCTCTTCGGT 61.546 60.000 0.00 0.00 0.00 4.69
3235 3302 0.977395 CCACCTCCTTCTCTTCGGTT 59.023 55.000 0.00 0.00 0.00 4.44
3236 3303 2.176889 CCACCTCCTTCTCTTCGGTTA 58.823 52.381 0.00 0.00 0.00 2.85
3237 3304 2.094130 CCACCTCCTTCTCTTCGGTTAC 60.094 54.545 0.00 0.00 0.00 2.50
3238 3305 2.561419 CACCTCCTTCTCTTCGGTTACA 59.439 50.000 0.00 0.00 0.00 2.41
3239 3306 3.195825 CACCTCCTTCTCTTCGGTTACAT 59.804 47.826 0.00 0.00 0.00 2.29
3240 3307 3.447944 ACCTCCTTCTCTTCGGTTACATC 59.552 47.826 0.00 0.00 0.00 3.06
3241 3308 3.181474 CCTCCTTCTCTTCGGTTACATCC 60.181 52.174 0.00 0.00 0.00 3.51
3242 3309 3.702045 CTCCTTCTCTTCGGTTACATCCT 59.298 47.826 0.00 0.00 0.00 3.24
3243 3310 3.700038 TCCTTCTCTTCGGTTACATCCTC 59.300 47.826 0.00 0.00 0.00 3.71
3244 3311 3.181474 CCTTCTCTTCGGTTACATCCTCC 60.181 52.174 0.00 0.00 0.00 4.30
3245 3312 3.095912 TCTCTTCGGTTACATCCTCCA 57.904 47.619 0.00 0.00 0.00 3.86
3246 3313 3.643237 TCTCTTCGGTTACATCCTCCAT 58.357 45.455 0.00 0.00 0.00 3.41
3247 3314 3.384789 TCTCTTCGGTTACATCCTCCATG 59.615 47.826 0.00 0.00 38.64 3.66
3249 3316 3.132289 TCTTCGGTTACATCCTCCATGTC 59.868 47.826 0.00 0.00 42.62 3.06
3250 3317 2.462723 TCGGTTACATCCTCCATGTCA 58.537 47.619 0.00 0.00 42.62 3.58
3251 3318 3.038280 TCGGTTACATCCTCCATGTCAT 58.962 45.455 0.00 0.00 42.62 3.06
3252 3319 3.133691 CGGTTACATCCTCCATGTCATG 58.866 50.000 5.79 5.79 42.62 3.07
3264 3331 2.577059 GTCATGGGACGCCTTCGA 59.423 61.111 0.00 0.00 39.41 3.71
3265 3332 1.079405 GTCATGGGACGCCTTCGAA 60.079 57.895 0.00 0.00 39.41 3.71
3266 3333 0.462047 GTCATGGGACGCCTTCGAAT 60.462 55.000 0.00 0.00 39.41 3.34
3267 3334 0.461870 TCATGGGACGCCTTCGAATG 60.462 55.000 0.00 0.00 39.41 2.67
3268 3335 0.461870 CATGGGACGCCTTCGAATGA 60.462 55.000 4.47 0.00 39.41 2.57
3269 3336 0.469917 ATGGGACGCCTTCGAATGAT 59.530 50.000 4.47 0.00 39.41 2.45
3270 3337 1.116308 TGGGACGCCTTCGAATGATA 58.884 50.000 4.47 0.00 39.41 2.15
3271 3338 1.202486 TGGGACGCCTTCGAATGATAC 60.202 52.381 4.47 0.00 39.41 2.24
3272 3339 1.499049 GGACGCCTTCGAATGATACC 58.501 55.000 4.47 0.38 39.41 2.73
3273 3340 1.202486 GGACGCCTTCGAATGATACCA 60.202 52.381 4.47 0.00 39.41 3.25
3274 3341 2.546778 GACGCCTTCGAATGATACCAA 58.453 47.619 4.47 0.00 39.41 3.67
3275 3342 2.933906 GACGCCTTCGAATGATACCAAA 59.066 45.455 4.47 0.00 39.41 3.28
3276 3343 3.541632 ACGCCTTCGAATGATACCAAAT 58.458 40.909 4.47 0.00 39.41 2.32
3277 3344 3.312421 ACGCCTTCGAATGATACCAAATG 59.688 43.478 4.47 0.00 39.41 2.32
3278 3345 3.303990 CGCCTTCGAATGATACCAAATGG 60.304 47.826 4.47 0.00 38.55 3.16
3279 3346 3.882888 GCCTTCGAATGATACCAAATGGA 59.117 43.478 6.42 0.00 38.94 3.41
3280 3347 4.023707 GCCTTCGAATGATACCAAATGGAG 60.024 45.833 6.42 0.00 38.94 3.86
3281 3348 5.126067 CCTTCGAATGATACCAAATGGAGT 58.874 41.667 6.42 0.00 38.94 3.85
3282 3349 5.237344 CCTTCGAATGATACCAAATGGAGTC 59.763 44.000 6.42 4.39 38.94 3.36
3283 3350 4.368315 TCGAATGATACCAAATGGAGTCG 58.632 43.478 6.42 4.54 38.94 4.18
3284 3351 4.119862 CGAATGATACCAAATGGAGTCGT 58.880 43.478 6.42 2.50 38.94 4.34
3285 3352 4.025730 CGAATGATACCAAATGGAGTCGTG 60.026 45.833 6.42 0.00 38.94 4.35
3286 3353 3.260475 TGATACCAAATGGAGTCGTGG 57.740 47.619 6.42 0.00 38.94 4.94
3287 3354 2.569853 TGATACCAAATGGAGTCGTGGT 59.430 45.455 6.42 10.24 46.12 4.16
3288 3355 3.008594 TGATACCAAATGGAGTCGTGGTT 59.991 43.478 6.42 1.97 41.68 3.67
3289 3356 1.604604 ACCAAATGGAGTCGTGGTTG 58.395 50.000 6.42 0.00 41.68 3.77
3290 3357 1.142060 ACCAAATGGAGTCGTGGTTGA 59.858 47.619 6.42 0.00 41.68 3.18
3291 3358 1.806542 CCAAATGGAGTCGTGGTTGAG 59.193 52.381 0.00 0.00 37.39 3.02
3292 3359 1.197721 CAAATGGAGTCGTGGTTGAGC 59.802 52.381 0.00 0.00 0.00 4.26
3293 3360 0.687354 AATGGAGTCGTGGTTGAGCT 59.313 50.000 0.00 0.00 0.00 4.09
3294 3361 0.247736 ATGGAGTCGTGGTTGAGCTC 59.752 55.000 6.82 6.82 0.00 4.09
3295 3362 1.112916 TGGAGTCGTGGTTGAGCTCA 61.113 55.000 13.74 13.74 0.00 4.26
3296 3363 0.247736 GGAGTCGTGGTTGAGCTCAT 59.752 55.000 19.04 0.00 0.00 2.90
3297 3364 1.634702 GAGTCGTGGTTGAGCTCATC 58.365 55.000 19.04 16.87 0.00 2.92
3298 3365 0.969149 AGTCGTGGTTGAGCTCATCA 59.031 50.000 19.04 16.03 35.62 3.07
3299 3366 1.344438 AGTCGTGGTTGAGCTCATCAA 59.656 47.619 19.04 7.61 45.79 2.57
3308 3375 3.063510 TGAGCTCATCAAGTTCAAGGG 57.936 47.619 13.74 0.00 41.66 3.95
3309 3376 2.373169 TGAGCTCATCAAGTTCAAGGGT 59.627 45.455 13.74 0.00 41.66 4.34
3310 3377 3.181440 TGAGCTCATCAAGTTCAAGGGTT 60.181 43.478 13.74 0.00 41.66 4.11
3311 3378 3.823304 GAGCTCATCAAGTTCAAGGGTTT 59.177 43.478 9.40 0.00 35.43 3.27
3312 3379 4.218312 AGCTCATCAAGTTCAAGGGTTTT 58.782 39.130 0.00 0.00 0.00 2.43
3313 3380 4.279420 AGCTCATCAAGTTCAAGGGTTTTC 59.721 41.667 0.00 0.00 0.00 2.29
3314 3381 4.037923 GCTCATCAAGTTCAAGGGTTTTCA 59.962 41.667 0.00 0.00 0.00 2.69
3315 3382 5.279156 GCTCATCAAGTTCAAGGGTTTTCAT 60.279 40.000 0.00 0.00 0.00 2.57
3316 3383 6.729690 TCATCAAGTTCAAGGGTTTTCATT 57.270 33.333 0.00 0.00 0.00 2.57
3317 3384 7.523709 GCTCATCAAGTTCAAGGGTTTTCATTA 60.524 37.037 0.00 0.00 0.00 1.90
3318 3385 8.421249 TCATCAAGTTCAAGGGTTTTCATTAT 57.579 30.769 0.00 0.00 0.00 1.28
3319 3386 8.869109 TCATCAAGTTCAAGGGTTTTCATTATT 58.131 29.630 0.00 0.00 0.00 1.40
3320 3387 9.492973 CATCAAGTTCAAGGGTTTTCATTATTT 57.507 29.630 0.00 0.00 0.00 1.40
3323 3390 9.423061 CAAGTTCAAGGGTTTTCATTATTTAGG 57.577 33.333 0.00 0.00 0.00 2.69
3324 3391 7.611770 AGTTCAAGGGTTTTCATTATTTAGGC 58.388 34.615 0.00 0.00 0.00 3.93
3325 3392 6.538945 TCAAGGGTTTTCATTATTTAGGCC 57.461 37.500 0.00 0.00 0.00 5.19
3326 3393 6.019748 TCAAGGGTTTTCATTATTTAGGCCA 58.980 36.000 5.01 0.00 0.00 5.36
3327 3394 5.932619 AGGGTTTTCATTATTTAGGCCAC 57.067 39.130 5.01 0.00 0.00 5.01
3328 3395 5.589831 AGGGTTTTCATTATTTAGGCCACT 58.410 37.500 5.01 0.00 0.00 4.00
3329 3396 6.737608 AGGGTTTTCATTATTTAGGCCACTA 58.262 36.000 5.01 0.00 0.00 2.74
3330 3397 6.833933 AGGGTTTTCATTATTTAGGCCACTAG 59.166 38.462 5.01 0.00 0.00 2.57
3331 3398 6.605995 GGGTTTTCATTATTTAGGCCACTAGT 59.394 38.462 5.01 0.00 0.00 2.57
3332 3399 7.123697 GGGTTTTCATTATTTAGGCCACTAGTT 59.876 37.037 5.01 0.00 0.00 2.24
3333 3400 7.973944 GGTTTTCATTATTTAGGCCACTAGTTG 59.026 37.037 5.01 0.00 0.00 3.16
3334 3401 8.520351 GTTTTCATTATTTAGGCCACTAGTTGT 58.480 33.333 5.01 0.00 0.00 3.32
3335 3402 7.624360 TTCATTATTTAGGCCACTAGTTGTG 57.376 36.000 5.01 0.00 45.80 3.33
3336 3403 6.717289 TCATTATTTAGGCCACTAGTTGTGT 58.283 36.000 5.01 0.00 44.81 3.72
3337 3404 6.821665 TCATTATTTAGGCCACTAGTTGTGTC 59.178 38.462 5.01 0.00 44.81 3.67
3338 3405 4.910458 ATTTAGGCCACTAGTTGTGTCT 57.090 40.909 5.01 0.00 44.81 3.41
3339 3406 4.699925 TTTAGGCCACTAGTTGTGTCTT 57.300 40.909 5.01 0.00 44.81 3.01
3340 3407 5.811796 TTTAGGCCACTAGTTGTGTCTTA 57.188 39.130 5.01 0.00 44.81 2.10
3341 3408 3.679824 AGGCCACTAGTTGTGTCTTAC 57.320 47.619 5.01 0.00 44.81 2.34
3342 3409 3.240302 AGGCCACTAGTTGTGTCTTACT 58.760 45.455 5.01 0.00 44.81 2.24
3343 3410 4.413760 AGGCCACTAGTTGTGTCTTACTA 58.586 43.478 5.01 0.00 44.81 1.82
3344 3411 5.024118 AGGCCACTAGTTGTGTCTTACTAT 58.976 41.667 5.01 0.00 44.81 2.12
3345 3412 5.484290 AGGCCACTAGTTGTGTCTTACTATT 59.516 40.000 5.01 0.00 44.81 1.73
3346 3413 5.811100 GGCCACTAGTTGTGTCTTACTATTC 59.189 44.000 0.00 0.00 44.81 1.75
3347 3414 6.395629 GCCACTAGTTGTGTCTTACTATTCA 58.604 40.000 4.03 0.00 44.81 2.57
3348 3415 6.531948 GCCACTAGTTGTGTCTTACTATTCAG 59.468 42.308 4.03 0.00 44.81 3.02
3349 3416 7.603651 CCACTAGTTGTGTCTTACTATTCAGT 58.396 38.462 4.03 0.00 44.81 3.41
3350 3417 8.088981 CCACTAGTTGTGTCTTACTATTCAGTT 58.911 37.037 4.03 0.00 44.81 3.16
3351 3418 9.477484 CACTAGTTGTGTCTTACTATTCAGTTT 57.523 33.333 0.00 0.00 41.53 2.66
3354 3421 8.732746 AGTTGTGTCTTACTATTCAGTTTTGT 57.267 30.769 0.00 0.00 36.14 2.83
3355 3422 8.827677 AGTTGTGTCTTACTATTCAGTTTTGTC 58.172 33.333 0.00 0.00 36.14 3.18
3356 3423 8.609176 GTTGTGTCTTACTATTCAGTTTTGTCA 58.391 33.333 0.00 0.00 36.14 3.58
3357 3424 8.902540 TGTGTCTTACTATTCAGTTTTGTCAT 57.097 30.769 0.00 0.00 36.14 3.06
3358 3425 9.337396 TGTGTCTTACTATTCAGTTTTGTCATT 57.663 29.630 0.00 0.00 36.14 2.57
3359 3426 9.599322 GTGTCTTACTATTCAGTTTTGTCATTG 57.401 33.333 0.00 0.00 36.14 2.82
3360 3427 8.783093 TGTCTTACTATTCAGTTTTGTCATTGG 58.217 33.333 0.00 0.00 36.14 3.16
3361 3428 8.999431 GTCTTACTATTCAGTTTTGTCATTGGA 58.001 33.333 0.00 0.00 36.14 3.53
3362 3429 9.567776 TCTTACTATTCAGTTTTGTCATTGGAA 57.432 29.630 0.00 0.00 36.14 3.53
3370 3437 9.638239 TTCAGTTTTGTCATTGGAAATTATAGC 57.362 29.630 0.00 0.00 0.00 2.97
3371 3438 9.023962 TCAGTTTTGTCATTGGAAATTATAGCT 57.976 29.630 0.00 0.00 0.00 3.32
3393 3460 8.707938 AGCTATTTAAAAATGTTCAGAATGCC 57.292 30.769 0.00 0.00 34.76 4.40
3394 3461 8.313292 AGCTATTTAAAAATGTTCAGAATGCCA 58.687 29.630 0.00 0.00 34.76 4.92
3395 3462 8.934825 GCTATTTAAAAATGTTCAGAATGCCAA 58.065 29.630 0.00 0.00 34.76 4.52
3397 3464 8.674263 ATTTAAAAATGTTCAGAATGCCAACA 57.326 26.923 0.00 0.00 37.25 3.33
3398 3465 8.498054 TTTAAAAATGTTCAGAATGCCAACAA 57.502 26.923 0.00 0.00 36.57 2.83
3399 3466 8.674263 TTAAAAATGTTCAGAATGCCAACAAT 57.326 26.923 0.00 0.00 36.57 2.71
3400 3467 6.790285 AAAATGTTCAGAATGCCAACAATC 57.210 33.333 0.00 0.00 36.57 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.228583 AGCCAGACTCTCCACGACA 60.229 57.895 0.00 0.00 0.00 4.35
157 158 2.750637 GCACAGGCTCTGCTGCAT 60.751 61.111 7.56 0.00 37.92 3.96
189 190 3.530260 GCATTGGGGTCCATGCCG 61.530 66.667 1.91 0.00 34.44 5.69
213 214 2.185608 GTCTCCTCAAGCTCGGCC 59.814 66.667 0.00 0.00 0.00 6.13
214 215 2.202676 CGTCTCCTCAAGCTCGGC 60.203 66.667 0.00 0.00 0.00 5.54
219 220 2.734673 CTTGCGCGTCTCCTCAAGC 61.735 63.158 8.43 0.00 31.02 4.01
279 280 4.704057 GGATCTTATACCCCTTATCGTCGT 59.296 45.833 0.00 0.00 0.00 4.34
320 321 5.465390 TGCACACACATTTAGTACAAGTCTC 59.535 40.000 0.00 0.00 0.00 3.36
632 638 0.032952 TCTAAGACGGCGCACAACTT 59.967 50.000 10.83 11.32 0.00 2.66
677 684 1.413767 CGTGTCGGCTTCTTCCATCG 61.414 60.000 0.00 0.00 0.00 3.84
851 884 5.507482 CGTGGATTTATAGACGTGGTGATCT 60.507 44.000 0.00 0.00 0.00 2.75
859 899 1.484356 GCGCGTGGATTTATAGACGT 58.516 50.000 8.43 0.00 34.32 4.34
886 926 4.524053 AGTGTGATGTGATCTACTACGGA 58.476 43.478 0.00 0.00 0.00 4.69
902 946 0.174617 TCGTGCTGTGTGAAGTGTGA 59.825 50.000 0.00 0.00 0.00 3.58
903 947 1.004610 CTTCGTGCTGTGTGAAGTGTG 60.005 52.381 0.00 0.00 35.51 3.82
904 948 1.134818 TCTTCGTGCTGTGTGAAGTGT 60.135 47.619 1.64 0.00 39.97 3.55
905 949 1.570813 TCTTCGTGCTGTGTGAAGTG 58.429 50.000 1.64 0.00 39.97 3.16
906 950 2.159099 TCTTCTTCGTGCTGTGTGAAGT 60.159 45.455 0.00 0.00 39.97 3.01
907 951 2.473816 TCTTCTTCGTGCTGTGTGAAG 58.526 47.619 0.00 0.00 40.30 3.02
908 952 2.595124 TCTTCTTCGTGCTGTGTGAA 57.405 45.000 0.00 0.00 0.00 3.18
941 985 2.354259 GAGGATCTGCTGGTTCAGTTG 58.646 52.381 0.00 0.00 35.63 3.16
1192 1246 4.293694 CTCGACGAGCTTGATCCG 57.706 61.111 12.67 8.26 0.00 4.18
1585 1639 4.286320 GTCGCGCTCGGGGATCAT 62.286 66.667 5.56 0.00 40.03 2.45
1989 2043 4.366684 CCTTCCACCACCAGCCCC 62.367 72.222 0.00 0.00 0.00 5.80
2434 2494 2.443887 TTCTCGACTAAACCCGTTGG 57.556 50.000 0.00 0.00 37.80 3.77
2441 2501 9.882856 CGACTGTTTATTTATTCTCGACTAAAC 57.117 33.333 0.00 0.00 32.43 2.01
2553 2618 2.026822 AGACCGAAACTAGTAGTCCGGA 60.027 50.000 32.91 0.00 40.10 5.14
2558 2623 5.075493 TCTGGAAAGACCGAAACTAGTAGT 58.925 41.667 0.00 0.00 42.61 2.73
2560 2625 6.209986 TCAATCTGGAAAGACCGAAACTAGTA 59.790 38.462 0.00 0.00 42.61 1.82
2572 2637 6.428159 GCTGAAACTAGTTCAATCTGGAAAGA 59.572 38.462 8.95 0.00 45.67 2.52
2590 2655 4.655762 AGGAAACTGAAAAGGCTGAAAC 57.344 40.909 0.00 0.00 41.13 2.78
2617 2683 1.582610 TTCGAATGGGCCGACTTTGC 61.583 55.000 0.00 0.00 35.61 3.68
2618 2684 0.447801 CTTCGAATGGGCCGACTTTG 59.552 55.000 0.00 0.00 35.61 2.77
2622 2688 1.379527 ATTTCTTCGAATGGGCCGAC 58.620 50.000 0.00 0.00 35.61 4.79
2629 2695 5.796935 CAGGCTGTTGTTATTTCTTCGAATG 59.203 40.000 6.28 0.00 0.00 2.67
2630 2696 5.705441 TCAGGCTGTTGTTATTTCTTCGAAT 59.295 36.000 15.27 0.00 0.00 3.34
2635 2701 6.491403 AGAACATCAGGCTGTTGTTATTTCTT 59.509 34.615 32.66 16.94 39.55 2.52
2650 2716 4.706476 TGGGCTTTTTGATAGAACATCAGG 59.294 41.667 0.00 0.00 0.00 3.86
2656 2722 5.254339 CCTGATGGGCTTTTTGATAGAAC 57.746 43.478 0.00 0.00 0.00 3.01
2704 2771 2.305927 GAGGATCCAGTTCCAGTTCCAA 59.694 50.000 15.82 0.00 38.32 3.53
2705 2772 1.909302 GAGGATCCAGTTCCAGTTCCA 59.091 52.381 15.82 0.00 38.32 3.53
2706 2773 2.192263 AGAGGATCCAGTTCCAGTTCC 58.808 52.381 15.82 0.00 38.32 3.62
2707 2774 4.223032 TGTTAGAGGATCCAGTTCCAGTTC 59.777 45.833 15.82 0.00 38.32 3.01
2708 2775 4.168101 TGTTAGAGGATCCAGTTCCAGTT 58.832 43.478 15.82 0.00 38.32 3.16
2709 2776 3.791320 TGTTAGAGGATCCAGTTCCAGT 58.209 45.455 15.82 0.00 38.32 4.00
2710 2777 5.363868 TGTATGTTAGAGGATCCAGTTCCAG 59.636 44.000 15.82 0.00 38.32 3.86
2711 2778 5.128827 GTGTATGTTAGAGGATCCAGTTCCA 59.871 44.000 15.82 5.20 38.32 3.53
2712 2779 5.128827 TGTGTATGTTAGAGGATCCAGTTCC 59.871 44.000 15.82 0.00 33.66 3.62
2713 2780 6.222038 TGTGTATGTTAGAGGATCCAGTTC 57.778 41.667 15.82 2.55 33.66 3.01
2714 2781 6.352222 CCTTGTGTATGTTAGAGGATCCAGTT 60.352 42.308 15.82 0.90 33.66 3.16
2715 2782 5.129485 CCTTGTGTATGTTAGAGGATCCAGT 59.871 44.000 15.82 2.43 33.66 4.00
2716 2783 5.363868 TCCTTGTGTATGTTAGAGGATCCAG 59.636 44.000 15.82 0.00 33.66 3.86
2717 2784 5.277250 TCCTTGTGTATGTTAGAGGATCCA 58.723 41.667 15.82 0.00 33.66 3.41
2718 2785 5.871396 TCCTTGTGTATGTTAGAGGATCC 57.129 43.478 2.48 2.48 33.66 3.36
2719 2786 7.275920 ACATTCCTTGTGTATGTTAGAGGATC 58.724 38.462 0.00 0.00 37.11 3.36
2720 2787 7.200434 ACATTCCTTGTGTATGTTAGAGGAT 57.800 36.000 0.00 0.00 37.11 3.24
2721 2788 6.620877 ACATTCCTTGTGTATGTTAGAGGA 57.379 37.500 0.00 0.00 37.11 3.71
2726 2793 9.653287 CTTCTCTAACATTCCTTGTGTATGTTA 57.347 33.333 0.00 0.00 41.36 2.41
2727 2794 7.607991 CCTTCTCTAACATTCCTTGTGTATGTT 59.392 37.037 0.00 0.00 43.02 2.71
2728 2795 7.106239 CCTTCTCTAACATTCCTTGTGTATGT 58.894 38.462 0.00 0.00 38.99 2.29
2729 2796 6.540189 CCCTTCTCTAACATTCCTTGTGTATG 59.460 42.308 0.00 0.00 38.99 2.39
2730 2797 6.443849 TCCCTTCTCTAACATTCCTTGTGTAT 59.556 38.462 0.00 0.00 38.99 2.29
2731 2798 5.783360 TCCCTTCTCTAACATTCCTTGTGTA 59.217 40.000 0.00 0.00 38.99 2.90
2732 2799 4.597507 TCCCTTCTCTAACATTCCTTGTGT 59.402 41.667 0.00 0.00 38.99 3.72
2733 2800 5.165961 TCCCTTCTCTAACATTCCTTGTG 57.834 43.478 0.00 0.00 38.99 3.33
2734 2801 7.698163 ATATCCCTTCTCTAACATTCCTTGT 57.302 36.000 0.00 0.00 41.53 3.16
2735 2802 9.717942 CTAATATCCCTTCTCTAACATTCCTTG 57.282 37.037 0.00 0.00 0.00 3.61
2736 2803 9.676129 TCTAATATCCCTTCTCTAACATTCCTT 57.324 33.333 0.00 0.00 0.00 3.36
2737 2804 9.676129 TTCTAATATCCCTTCTCTAACATTCCT 57.324 33.333 0.00 0.00 0.00 3.36
2741 2808 9.785982 GCTTTTCTAATATCCCTTCTCTAACAT 57.214 33.333 0.00 0.00 0.00 2.71
2742 2809 8.993424 AGCTTTTCTAATATCCCTTCTCTAACA 58.007 33.333 0.00 0.00 0.00 2.41
2745 2812 9.656323 TGTAGCTTTTCTAATATCCCTTCTCTA 57.344 33.333 0.00 0.00 0.00 2.43
2746 2813 8.554490 TGTAGCTTTTCTAATATCCCTTCTCT 57.446 34.615 0.00 0.00 0.00 3.10
2747 2814 8.425703 ACTGTAGCTTTTCTAATATCCCTTCTC 58.574 37.037 0.00 0.00 0.00 2.87
2748 2815 8.325477 ACTGTAGCTTTTCTAATATCCCTTCT 57.675 34.615 0.00 0.00 0.00 2.85
2749 2816 9.478768 GTACTGTAGCTTTTCTAATATCCCTTC 57.521 37.037 0.00 0.00 0.00 3.46
2750 2817 8.430431 GGTACTGTAGCTTTTCTAATATCCCTT 58.570 37.037 9.64 0.00 0.00 3.95
2751 2818 7.016366 GGGTACTGTAGCTTTTCTAATATCCCT 59.984 40.741 15.74 0.00 0.00 4.20
2752 2819 7.016366 AGGGTACTGTAGCTTTTCTAATATCCC 59.984 40.741 15.74 4.91 0.00 3.85
2753 2820 7.964624 AGGGTACTGTAGCTTTTCTAATATCC 58.035 38.462 15.74 0.00 0.00 2.59
2756 2823 9.484806 AGTTAGGGTACTGTAGCTTTTCTAATA 57.515 33.333 15.74 0.00 0.00 0.98
2757 2824 8.376803 AGTTAGGGTACTGTAGCTTTTCTAAT 57.623 34.615 15.74 4.44 0.00 1.73
2758 2825 7.787623 AGTTAGGGTACTGTAGCTTTTCTAA 57.212 36.000 15.74 11.56 0.00 2.10
2759 2826 7.093596 GGAAGTTAGGGTACTGTAGCTTTTCTA 60.094 40.741 15.74 6.77 0.00 2.10
2760 2827 6.295745 GGAAGTTAGGGTACTGTAGCTTTTCT 60.296 42.308 15.74 7.64 0.00 2.52
2761 2828 5.873712 GGAAGTTAGGGTACTGTAGCTTTTC 59.126 44.000 15.74 9.43 0.00 2.29
2762 2829 5.280368 GGGAAGTTAGGGTACTGTAGCTTTT 60.280 44.000 15.74 1.25 0.00 2.27
2763 2830 4.224594 GGGAAGTTAGGGTACTGTAGCTTT 59.775 45.833 15.74 8.04 0.00 3.51
2764 2831 3.773667 GGGAAGTTAGGGTACTGTAGCTT 59.226 47.826 15.74 11.38 0.00 3.74
2765 2832 3.012616 AGGGAAGTTAGGGTACTGTAGCT 59.987 47.826 15.74 0.00 0.00 3.32
2766 2833 3.372897 AGGGAAGTTAGGGTACTGTAGC 58.627 50.000 8.46 8.46 0.00 3.58
2767 2834 5.270794 AGAAGGGAAGTTAGGGTACTGTAG 58.729 45.833 0.00 0.00 0.00 2.74
2768 2835 5.280998 AGAAGGGAAGTTAGGGTACTGTA 57.719 43.478 0.00 0.00 0.00 2.74
2769 2836 4.143406 AGAAGGGAAGTTAGGGTACTGT 57.857 45.455 0.00 0.00 0.00 3.55
2770 2837 6.809976 AATAGAAGGGAAGTTAGGGTACTG 57.190 41.667 0.00 0.00 0.00 2.74
2771 2838 9.156940 GATTAATAGAAGGGAAGTTAGGGTACT 57.843 37.037 0.00 0.00 0.00 2.73
2772 2839 8.373981 GGATTAATAGAAGGGAAGTTAGGGTAC 58.626 40.741 0.00 0.00 0.00 3.34
2773 2840 8.075621 TGGATTAATAGAAGGGAAGTTAGGGTA 58.924 37.037 0.00 0.00 0.00 3.69
2774 2841 6.912561 TGGATTAATAGAAGGGAAGTTAGGGT 59.087 38.462 0.00 0.00 0.00 4.34
2775 2842 7.388638 TGGATTAATAGAAGGGAAGTTAGGG 57.611 40.000 0.00 0.00 0.00 3.53
2776 2843 9.945904 GTATGGATTAATAGAAGGGAAGTTAGG 57.054 37.037 0.00 0.00 0.00 2.69
2794 2861 9.646522 AGTTATTCAGCCTTAATTGTATGGATT 57.353 29.630 0.00 0.00 0.00 3.01
2795 2862 9.646522 AAGTTATTCAGCCTTAATTGTATGGAT 57.353 29.630 0.00 0.00 0.00 3.41
2839 2906 9.729281 CCCTAAACTCTAAACACTAAACCATAA 57.271 33.333 0.00 0.00 0.00 1.90
2840 2907 8.883302 ACCCTAAACTCTAAACACTAAACCATA 58.117 33.333 0.00 0.00 0.00 2.74
2841 2908 7.664318 CACCCTAAACTCTAAACACTAAACCAT 59.336 37.037 0.00 0.00 0.00 3.55
2842 2909 6.993902 CACCCTAAACTCTAAACACTAAACCA 59.006 38.462 0.00 0.00 0.00 3.67
2843 2910 6.994496 ACACCCTAAACTCTAAACACTAAACC 59.006 38.462 0.00 0.00 0.00 3.27
2844 2911 9.546428 TTACACCCTAAACTCTAAACACTAAAC 57.454 33.333 0.00 0.00 0.00 2.01
2845 2912 9.768662 CTTACACCCTAAACTCTAAACACTAAA 57.231 33.333 0.00 0.00 0.00 1.85
2846 2913 9.146586 TCTTACACCCTAAACTCTAAACACTAA 57.853 33.333 0.00 0.00 0.00 2.24
2847 2914 8.710749 TCTTACACCCTAAACTCTAAACACTA 57.289 34.615 0.00 0.00 0.00 2.74
2848 2915 7.607615 TCTTACACCCTAAACTCTAAACACT 57.392 36.000 0.00 0.00 0.00 3.55
2849 2916 9.933723 TTATCTTACACCCTAAACTCTAAACAC 57.066 33.333 0.00 0.00 0.00 3.32
2850 2917 9.933723 GTTATCTTACACCCTAAACTCTAAACA 57.066 33.333 0.00 0.00 0.00 2.83
2955 3022 9.703677 CCCTAAATTCTAAACCCTAAACCATAA 57.296 33.333 0.00 0.00 0.00 1.90
2956 3023 8.848830 ACCCTAAATTCTAAACCCTAAACCATA 58.151 33.333 0.00 0.00 0.00 2.74
2957 3024 7.618117 CACCCTAAATTCTAAACCCTAAACCAT 59.382 37.037 0.00 0.00 0.00 3.55
2958 3025 6.949463 CACCCTAAATTCTAAACCCTAAACCA 59.051 38.462 0.00 0.00 0.00 3.67
2959 3026 6.950041 ACACCCTAAATTCTAAACCCTAAACC 59.050 38.462 0.00 0.00 0.00 3.27
2960 3027 9.519191 TTACACCCTAAATTCTAAACCCTAAAC 57.481 33.333 0.00 0.00 0.00 2.01
2961 3028 9.743581 CTTACACCCTAAATTCTAAACCCTAAA 57.256 33.333 0.00 0.00 0.00 1.85
2962 3029 8.330993 CCTTACACCCTAAATTCTAAACCCTAA 58.669 37.037 0.00 0.00 0.00 2.69
2963 3030 7.462006 ACCTTACACCCTAAATTCTAAACCCTA 59.538 37.037 0.00 0.00 0.00 3.53
2964 3031 6.276330 ACCTTACACCCTAAATTCTAAACCCT 59.724 38.462 0.00 0.00 0.00 4.34
2965 3032 6.487828 ACCTTACACCCTAAATTCTAAACCC 58.512 40.000 0.00 0.00 0.00 4.11
2966 3033 8.950210 GTTACCTTACACCCTAAATTCTAAACC 58.050 37.037 0.00 0.00 0.00 3.27
2967 3034 9.730705 AGTTACCTTACACCCTAAATTCTAAAC 57.269 33.333 0.00 0.00 0.00 2.01
3099 3166 9.404848 GGGACTATTAGCAGGTTATTTACTTTT 57.595 33.333 0.00 0.00 0.00 2.27
3100 3167 8.779031 AGGGACTATTAGCAGGTTATTTACTTT 58.221 33.333 0.00 0.00 36.02 2.66
3101 3168 8.333226 AGGGACTATTAGCAGGTTATTTACTT 57.667 34.615 0.00 0.00 36.02 2.24
3102 3169 7.932683 AGGGACTATTAGCAGGTTATTTACT 57.067 36.000 0.00 0.00 36.02 2.24
3103 3170 9.486497 GTTAGGGACTATTAGCAGGTTATTTAC 57.514 37.037 0.00 0.00 42.38 2.01
3104 3171 9.216148 TGTTAGGGACTATTAGCAGGTTATTTA 57.784 33.333 0.00 0.00 42.38 1.40
3105 3172 8.097791 TGTTAGGGACTATTAGCAGGTTATTT 57.902 34.615 0.00 0.00 42.38 1.40
3106 3173 7.685849 TGTTAGGGACTATTAGCAGGTTATT 57.314 36.000 0.00 0.00 42.38 1.40
3107 3174 7.873699 ATGTTAGGGACTATTAGCAGGTTAT 57.126 36.000 0.00 0.00 42.38 1.89
3108 3175 7.202066 GGAATGTTAGGGACTATTAGCAGGTTA 60.202 40.741 0.00 0.00 42.38 2.85
3109 3176 6.409349 GGAATGTTAGGGACTATTAGCAGGTT 60.409 42.308 0.00 0.00 42.38 3.50
3110 3177 5.071923 GGAATGTTAGGGACTATTAGCAGGT 59.928 44.000 0.00 0.00 42.38 4.00
3111 3178 5.308237 AGGAATGTTAGGGACTATTAGCAGG 59.692 44.000 0.00 0.00 42.38 4.85
3112 3179 6.426646 AGGAATGTTAGGGACTATTAGCAG 57.573 41.667 0.00 0.00 42.38 4.24
3113 3180 6.824958 AAGGAATGTTAGGGACTATTAGCA 57.175 37.500 0.00 0.00 42.38 3.49
3114 3181 7.773690 TGAAAAGGAATGTTAGGGACTATTAGC 59.226 37.037 0.00 0.00 42.38 3.09
3115 3182 9.853177 ATGAAAAGGAATGTTAGGGACTATTAG 57.147 33.333 0.00 0.00 42.38 1.73
3117 3184 9.547279 AAATGAAAAGGAATGTTAGGGACTATT 57.453 29.630 0.00 0.00 42.38 1.73
3118 3185 9.547279 AAAATGAAAAGGAATGTTAGGGACTAT 57.453 29.630 0.00 0.00 42.38 2.12
3119 3186 8.950007 AAAATGAAAAGGAATGTTAGGGACTA 57.050 30.769 0.00 0.00 41.75 2.59
3120 3187 7.855784 AAAATGAAAAGGAATGTTAGGGACT 57.144 32.000 0.00 0.00 46.37 3.85
3121 3188 8.581578 TGTAAAATGAAAAGGAATGTTAGGGAC 58.418 33.333 0.00 0.00 0.00 4.46
3122 3189 8.581578 GTGTAAAATGAAAAGGAATGTTAGGGA 58.418 33.333 0.00 0.00 0.00 4.20
3123 3190 8.585018 AGTGTAAAATGAAAAGGAATGTTAGGG 58.415 33.333 0.00 0.00 0.00 3.53
3128 3195 8.504005 CGTCTAGTGTAAAATGAAAAGGAATGT 58.496 33.333 0.00 0.00 0.00 2.71
3129 3196 8.717821 TCGTCTAGTGTAAAATGAAAAGGAATG 58.282 33.333 0.00 0.00 0.00 2.67
3130 3197 8.842358 TCGTCTAGTGTAAAATGAAAAGGAAT 57.158 30.769 0.00 0.00 0.00 3.01
3131 3198 7.095355 GCTCGTCTAGTGTAAAATGAAAAGGAA 60.095 37.037 0.00 0.00 0.00 3.36
3132 3199 6.367969 GCTCGTCTAGTGTAAAATGAAAAGGA 59.632 38.462 0.00 0.00 0.00 3.36
3133 3200 6.369065 AGCTCGTCTAGTGTAAAATGAAAAGG 59.631 38.462 0.00 0.00 0.00 3.11
3134 3201 7.329717 AGAGCTCGTCTAGTGTAAAATGAAAAG 59.670 37.037 8.37 0.00 31.71 2.27
3135 3202 7.116376 CAGAGCTCGTCTAGTGTAAAATGAAAA 59.884 37.037 8.37 0.00 32.51 2.29
3136 3203 6.586463 CAGAGCTCGTCTAGTGTAAAATGAAA 59.414 38.462 8.37 0.00 32.51 2.69
3137 3204 6.093404 CAGAGCTCGTCTAGTGTAAAATGAA 58.907 40.000 8.37 0.00 32.51 2.57
3138 3205 5.183331 ACAGAGCTCGTCTAGTGTAAAATGA 59.817 40.000 8.37 0.00 32.51 2.57
3139 3206 5.403246 ACAGAGCTCGTCTAGTGTAAAATG 58.597 41.667 8.37 0.00 32.51 2.32
3140 3207 5.646577 ACAGAGCTCGTCTAGTGTAAAAT 57.353 39.130 8.37 0.00 32.51 1.82
3141 3208 5.391736 GCTACAGAGCTCGTCTAGTGTAAAA 60.392 44.000 8.37 0.00 45.98 1.52
3142 3209 4.094590 GCTACAGAGCTCGTCTAGTGTAAA 59.905 45.833 8.37 0.00 45.98 2.01
3143 3210 3.622163 GCTACAGAGCTCGTCTAGTGTAA 59.378 47.826 8.37 0.00 45.98 2.41
3144 3211 3.196463 GCTACAGAGCTCGTCTAGTGTA 58.804 50.000 8.37 9.35 45.98 2.90
3145 3212 2.011222 GCTACAGAGCTCGTCTAGTGT 58.989 52.381 8.37 8.63 45.98 3.55
3146 3213 2.748461 GCTACAGAGCTCGTCTAGTG 57.252 55.000 8.37 2.20 45.98 2.74
3157 3224 3.006323 AGGAAAGTCACAGTGCTACAGAG 59.994 47.826 0.00 0.00 0.00 3.35
3158 3225 2.965831 AGGAAAGTCACAGTGCTACAGA 59.034 45.455 0.00 0.00 0.00 3.41
3159 3226 3.393089 AGGAAAGTCACAGTGCTACAG 57.607 47.619 0.00 0.00 0.00 2.74
3160 3227 3.388024 AGAAGGAAAGTCACAGTGCTACA 59.612 43.478 0.00 0.00 0.00 2.74
3161 3228 3.991121 GAGAAGGAAAGTCACAGTGCTAC 59.009 47.826 0.00 0.00 0.00 3.58
3162 3229 3.898123 AGAGAAGGAAAGTCACAGTGCTA 59.102 43.478 0.00 0.00 0.00 3.49
3163 3230 2.703007 AGAGAAGGAAAGTCACAGTGCT 59.297 45.455 0.00 0.00 0.00 4.40
3164 3231 3.118905 AGAGAAGGAAAGTCACAGTGC 57.881 47.619 0.00 0.00 0.00 4.40
3165 3232 5.848406 ACTTAGAGAAGGAAAGTCACAGTG 58.152 41.667 0.00 0.00 36.95 3.66
3166 3233 6.487299 AACTTAGAGAAGGAAAGTCACAGT 57.513 37.500 0.00 0.00 36.95 3.55
3167 3234 7.887381 TCTAACTTAGAGAAGGAAAGTCACAG 58.113 38.462 0.00 0.00 36.95 3.66
3168 3235 7.834881 TCTAACTTAGAGAAGGAAAGTCACA 57.165 36.000 0.00 0.00 36.95 3.58
3182 3249 3.488363 GAGCCGGATCCTCTAACTTAGA 58.512 50.000 9.02 0.00 0.00 2.10
3183 3250 2.226912 CGAGCCGGATCCTCTAACTTAG 59.773 54.545 15.35 0.00 0.00 2.18
3184 3251 2.228059 CGAGCCGGATCCTCTAACTTA 58.772 52.381 15.35 0.00 0.00 2.24
3185 3252 1.033574 CGAGCCGGATCCTCTAACTT 58.966 55.000 15.35 0.00 0.00 2.66
3186 3253 1.457009 GCGAGCCGGATCCTCTAACT 61.457 60.000 15.35 0.00 0.00 2.24
3187 3254 1.007154 GCGAGCCGGATCCTCTAAC 60.007 63.158 15.35 0.00 0.00 2.34
3188 3255 1.152735 AGCGAGCCGGATCCTCTAA 60.153 57.895 15.35 0.00 0.00 2.10
3189 3256 1.601197 GAGCGAGCCGGATCCTCTA 60.601 63.158 23.00 0.00 0.00 2.43
3190 3257 2.909965 GAGCGAGCCGGATCCTCT 60.910 66.667 23.00 16.91 0.00 3.69
3191 3258 2.414840 GAAGAGCGAGCCGGATCCTC 62.415 65.000 22.89 22.89 0.00 3.71
3192 3259 2.443016 AAGAGCGAGCCGGATCCT 60.443 61.111 15.35 12.33 0.00 3.24
3193 3260 2.028337 GAAGAGCGAGCCGGATCC 59.972 66.667 15.35 7.12 0.00 3.36
3194 3261 2.028337 GGAAGAGCGAGCCGGATC 59.972 66.667 10.41 10.41 0.00 3.36
3195 3262 2.443016 AGGAAGAGCGAGCCGGAT 60.443 61.111 5.05 0.00 0.00 4.18
3196 3263 3.141488 GAGGAAGAGCGAGCCGGA 61.141 66.667 5.05 0.00 0.00 5.14
3197 3264 3.423162 CTGAGGAAGAGCGAGCCGG 62.423 68.421 0.00 0.00 0.00 6.13
3198 3265 2.103934 CTGAGGAAGAGCGAGCCG 59.896 66.667 0.00 0.00 0.00 5.52
3199 3266 2.202864 GCTGAGGAAGAGCGAGCC 60.203 66.667 0.00 0.00 0.00 4.70
3200 3267 2.202864 GGCTGAGGAAGAGCGAGC 60.203 66.667 0.00 0.00 37.32 5.03
3201 3268 1.153667 GTGGCTGAGGAAGAGCGAG 60.154 63.158 0.00 0.00 37.32 5.03
3202 3269 2.650116 GGTGGCTGAGGAAGAGCGA 61.650 63.158 0.00 0.00 37.32 4.93
3203 3270 2.125350 GGTGGCTGAGGAAGAGCG 60.125 66.667 0.00 0.00 37.32 5.03
3204 3271 1.220477 GAGGTGGCTGAGGAAGAGC 59.780 63.158 0.00 0.00 35.57 4.09
3205 3272 0.617249 AGGAGGTGGCTGAGGAAGAG 60.617 60.000 0.00 0.00 0.00 2.85
3206 3273 0.178891 AAGGAGGTGGCTGAGGAAGA 60.179 55.000 0.00 0.00 0.00 2.87
3207 3274 0.251634 GAAGGAGGTGGCTGAGGAAG 59.748 60.000 0.00 0.00 0.00 3.46
3208 3275 0.178891 AGAAGGAGGTGGCTGAGGAA 60.179 55.000 0.00 0.00 0.00 3.36
3209 3276 0.616111 GAGAAGGAGGTGGCTGAGGA 60.616 60.000 0.00 0.00 0.00 3.71
3210 3277 0.617249 AGAGAAGGAGGTGGCTGAGG 60.617 60.000 0.00 0.00 0.00 3.86
3211 3278 1.206849 GAAGAGAAGGAGGTGGCTGAG 59.793 57.143 0.00 0.00 0.00 3.35
3212 3279 1.270907 GAAGAGAAGGAGGTGGCTGA 58.729 55.000 0.00 0.00 0.00 4.26
3213 3280 0.108424 CGAAGAGAAGGAGGTGGCTG 60.108 60.000 0.00 0.00 0.00 4.85
3214 3281 1.261238 CCGAAGAGAAGGAGGTGGCT 61.261 60.000 0.00 0.00 0.00 4.75
3215 3282 1.219393 CCGAAGAGAAGGAGGTGGC 59.781 63.158 0.00 0.00 0.00 5.01
3216 3283 0.977395 AACCGAAGAGAAGGAGGTGG 59.023 55.000 0.00 0.00 35.08 4.61
3217 3284 2.561419 TGTAACCGAAGAGAAGGAGGTG 59.439 50.000 0.00 0.00 35.08 4.00
3218 3285 2.885616 TGTAACCGAAGAGAAGGAGGT 58.114 47.619 0.00 0.00 36.66 3.85
3219 3286 3.181474 GGATGTAACCGAAGAGAAGGAGG 60.181 52.174 0.00 0.00 0.00 4.30
3220 3287 3.702045 AGGATGTAACCGAAGAGAAGGAG 59.298 47.826 0.00 0.00 34.73 3.69
3221 3288 3.700038 GAGGATGTAACCGAAGAGAAGGA 59.300 47.826 0.00 0.00 34.73 3.36
3222 3289 3.181474 GGAGGATGTAACCGAAGAGAAGG 60.181 52.174 0.00 0.00 34.73 3.46
3223 3290 3.447586 TGGAGGATGTAACCGAAGAGAAG 59.552 47.826 0.00 0.00 34.73 2.85
3224 3291 3.437213 TGGAGGATGTAACCGAAGAGAA 58.563 45.455 0.00 0.00 34.73 2.87
3225 3292 3.095912 TGGAGGATGTAACCGAAGAGA 57.904 47.619 0.00 0.00 34.73 3.10
3226 3293 3.133003 ACATGGAGGATGTAACCGAAGAG 59.867 47.826 0.00 0.00 43.96 2.85
3227 3294 3.104512 ACATGGAGGATGTAACCGAAGA 58.895 45.455 0.00 0.00 43.96 2.87
3228 3295 3.118775 TGACATGGAGGATGTAACCGAAG 60.119 47.826 0.00 0.00 45.90 3.79
3229 3296 2.835156 TGACATGGAGGATGTAACCGAA 59.165 45.455 0.00 0.00 45.90 4.30
3230 3297 2.462723 TGACATGGAGGATGTAACCGA 58.537 47.619 0.00 0.00 45.90 4.69
3231 3298 2.979814 TGACATGGAGGATGTAACCG 57.020 50.000 0.00 0.00 45.90 4.44
3244 3311 1.431488 CGAAGGCGTCCCATGACATG 61.431 60.000 8.56 8.56 41.85 3.21
3245 3312 1.153369 CGAAGGCGTCCCATGACAT 60.153 57.895 0.00 0.00 41.85 3.06
3246 3313 1.822114 TTCGAAGGCGTCCCATGACA 61.822 55.000 0.00 0.00 41.85 3.58
3247 3314 0.462047 ATTCGAAGGCGTCCCATGAC 60.462 55.000 3.35 0.00 38.98 3.06
3248 3315 0.461870 CATTCGAAGGCGTCCCATGA 60.462 55.000 3.35 0.00 38.98 3.07
3249 3316 0.461870 TCATTCGAAGGCGTCCCATG 60.462 55.000 4.63 0.00 38.98 3.66
3250 3317 0.469917 ATCATTCGAAGGCGTCCCAT 59.530 50.000 4.63 0.00 38.98 4.00
3251 3318 1.116308 TATCATTCGAAGGCGTCCCA 58.884 50.000 4.63 0.00 38.98 4.37
3252 3319 1.499049 GTATCATTCGAAGGCGTCCC 58.501 55.000 4.63 0.00 38.98 4.46
3253 3320 1.202486 TGGTATCATTCGAAGGCGTCC 60.202 52.381 4.63 7.38 38.98 4.79
3254 3321 2.218953 TGGTATCATTCGAAGGCGTC 57.781 50.000 4.63 0.00 38.98 5.19
3255 3322 2.684001 TTGGTATCATTCGAAGGCGT 57.316 45.000 4.63 0.00 38.98 5.68
3256 3323 3.303990 CCATTTGGTATCATTCGAAGGCG 60.304 47.826 4.63 0.00 39.35 5.52
3257 3324 3.882888 TCCATTTGGTATCATTCGAAGGC 59.117 43.478 4.63 0.00 36.34 4.35
3258 3325 5.126067 ACTCCATTTGGTATCATTCGAAGG 58.874 41.667 2.79 2.79 36.34 3.46
3259 3326 5.050769 CGACTCCATTTGGTATCATTCGAAG 60.051 44.000 3.35 0.00 36.34 3.79
3260 3327 4.808895 CGACTCCATTTGGTATCATTCGAA 59.191 41.667 0.00 0.00 36.34 3.71
3261 3328 4.142026 ACGACTCCATTTGGTATCATTCGA 60.142 41.667 0.00 0.00 36.34 3.71
3262 3329 4.025730 CACGACTCCATTTGGTATCATTCG 60.026 45.833 0.00 0.00 36.34 3.34
3263 3330 4.273480 CCACGACTCCATTTGGTATCATTC 59.727 45.833 0.00 0.00 36.34 2.67
3264 3331 4.199310 CCACGACTCCATTTGGTATCATT 58.801 43.478 0.00 0.00 36.34 2.57
3265 3332 3.199946 ACCACGACTCCATTTGGTATCAT 59.800 43.478 0.00 0.00 40.69 2.45
3266 3333 2.569853 ACCACGACTCCATTTGGTATCA 59.430 45.455 0.00 0.00 40.69 2.15
3267 3334 3.261981 ACCACGACTCCATTTGGTATC 57.738 47.619 0.00 0.00 40.69 2.24
3268 3335 3.008594 TCAACCACGACTCCATTTGGTAT 59.991 43.478 0.00 0.00 41.68 2.73
3269 3336 2.369203 TCAACCACGACTCCATTTGGTA 59.631 45.455 0.00 0.00 41.68 3.25
3270 3337 1.142060 TCAACCACGACTCCATTTGGT 59.858 47.619 0.00 0.00 44.52 3.67
3271 3338 1.806542 CTCAACCACGACTCCATTTGG 59.193 52.381 0.00 0.00 35.06 3.28
3272 3339 1.197721 GCTCAACCACGACTCCATTTG 59.802 52.381 0.00 0.00 0.00 2.32
3273 3340 1.072331 AGCTCAACCACGACTCCATTT 59.928 47.619 0.00 0.00 0.00 2.32
3274 3341 0.687354 AGCTCAACCACGACTCCATT 59.313 50.000 0.00 0.00 0.00 3.16
3275 3342 0.247736 GAGCTCAACCACGACTCCAT 59.752 55.000 9.40 0.00 0.00 3.41
3276 3343 1.112916 TGAGCTCAACCACGACTCCA 61.113 55.000 15.67 0.00 0.00 3.86
3277 3344 0.247736 ATGAGCTCAACCACGACTCC 59.752 55.000 22.50 0.00 0.00 3.85
3278 3345 1.067565 TGATGAGCTCAACCACGACTC 60.068 52.381 22.50 11.53 0.00 3.36
3279 3346 0.969149 TGATGAGCTCAACCACGACT 59.031 50.000 22.50 0.18 0.00 4.18
3280 3347 1.728971 CTTGATGAGCTCAACCACGAC 59.271 52.381 22.50 7.01 38.97 4.34
3281 3348 1.344438 ACTTGATGAGCTCAACCACGA 59.656 47.619 22.50 11.17 38.97 4.35
3282 3349 1.800805 ACTTGATGAGCTCAACCACG 58.199 50.000 22.50 19.73 38.97 4.94
3283 3350 3.141398 TGAACTTGATGAGCTCAACCAC 58.859 45.455 22.50 12.80 38.97 4.16
3284 3351 3.490439 TGAACTTGATGAGCTCAACCA 57.510 42.857 22.50 18.37 38.97 3.67
3285 3352 3.190118 CCTTGAACTTGATGAGCTCAACC 59.810 47.826 22.50 15.89 38.97 3.77
3286 3353 3.190118 CCCTTGAACTTGATGAGCTCAAC 59.810 47.826 22.50 19.25 38.97 3.18
3287 3354 3.181440 ACCCTTGAACTTGATGAGCTCAA 60.181 43.478 22.50 1.31 41.61 3.02
3288 3355 2.373169 ACCCTTGAACTTGATGAGCTCA 59.627 45.455 20.79 20.79 0.00 4.26
3289 3356 3.064900 ACCCTTGAACTTGATGAGCTC 57.935 47.619 6.82 6.82 0.00 4.09
3290 3357 3.515602 AACCCTTGAACTTGATGAGCT 57.484 42.857 0.00 0.00 0.00 4.09
3291 3358 4.037923 TGAAAACCCTTGAACTTGATGAGC 59.962 41.667 0.00 0.00 0.00 4.26
3292 3359 5.772825 TGAAAACCCTTGAACTTGATGAG 57.227 39.130 0.00 0.00 0.00 2.90
3293 3360 6.729690 AATGAAAACCCTTGAACTTGATGA 57.270 33.333 0.00 0.00 0.00 2.92
3294 3361 9.492973 AAATAATGAAAACCCTTGAACTTGATG 57.507 29.630 0.00 0.00 0.00 3.07
3297 3364 9.423061 CCTAAATAATGAAAACCCTTGAACTTG 57.577 33.333 0.00 0.00 0.00 3.16
3298 3365 8.094548 GCCTAAATAATGAAAACCCTTGAACTT 58.905 33.333 0.00 0.00 0.00 2.66
3299 3366 7.310423 GGCCTAAATAATGAAAACCCTTGAACT 60.310 37.037 0.00 0.00 0.00 3.01
3300 3367 6.816640 GGCCTAAATAATGAAAACCCTTGAAC 59.183 38.462 0.00 0.00 0.00 3.18
3301 3368 6.498651 TGGCCTAAATAATGAAAACCCTTGAA 59.501 34.615 3.32 0.00 0.00 2.69
3302 3369 6.019748 TGGCCTAAATAATGAAAACCCTTGA 58.980 36.000 3.32 0.00 0.00 3.02
3303 3370 6.070824 AGTGGCCTAAATAATGAAAACCCTTG 60.071 38.462 3.32 0.00 0.00 3.61
3304 3371 6.022958 AGTGGCCTAAATAATGAAAACCCTT 58.977 36.000 3.32 0.00 0.00 3.95
3305 3372 5.589831 AGTGGCCTAAATAATGAAAACCCT 58.410 37.500 3.32 0.00 0.00 4.34
3306 3373 5.932619 AGTGGCCTAAATAATGAAAACCC 57.067 39.130 3.32 0.00 0.00 4.11
3307 3374 7.640597 ACTAGTGGCCTAAATAATGAAAACC 57.359 36.000 3.32 0.00 0.00 3.27
3308 3375 8.520351 ACAACTAGTGGCCTAAATAATGAAAAC 58.480 33.333 3.32 0.00 0.00 2.43
3309 3376 8.519526 CACAACTAGTGGCCTAAATAATGAAAA 58.480 33.333 3.32 0.00 44.69 2.29
3310 3377 8.050778 CACAACTAGTGGCCTAAATAATGAAA 57.949 34.615 3.32 0.00 44.69 2.69
3311 3378 7.624360 CACAACTAGTGGCCTAAATAATGAA 57.376 36.000 3.32 0.00 44.69 2.57
3323 3390 7.791293 ACTGAATAGTAAGACACAACTAGTGGC 60.791 40.741 0.00 0.00 45.92 5.01
3324 3391 7.603651 ACTGAATAGTAAGACACAACTAGTGG 58.396 38.462 0.00 0.00 43.43 4.00
3325 3392 9.477484 AAACTGAATAGTAAGACACAACTAGTG 57.523 33.333 0.00 0.00 44.75 2.74
3328 3395 9.826574 ACAAAACTGAATAGTAAGACACAACTA 57.173 29.630 0.00 0.00 35.69 2.24
3329 3396 8.732746 ACAAAACTGAATAGTAAGACACAACT 57.267 30.769 0.00 0.00 35.69 3.16
3330 3397 8.609176 TGACAAAACTGAATAGTAAGACACAAC 58.391 33.333 0.00 0.00 35.69 3.32
3331 3398 8.725405 TGACAAAACTGAATAGTAAGACACAA 57.275 30.769 0.00 0.00 35.69 3.33
3332 3399 8.902540 ATGACAAAACTGAATAGTAAGACACA 57.097 30.769 0.00 0.00 35.69 3.72
3333 3400 9.599322 CAATGACAAAACTGAATAGTAAGACAC 57.401 33.333 0.00 0.00 35.69 3.67
3334 3401 8.783093 CCAATGACAAAACTGAATAGTAAGACA 58.217 33.333 0.00 0.00 35.69 3.41
3335 3402 8.999431 TCCAATGACAAAACTGAATAGTAAGAC 58.001 33.333 0.00 0.00 35.69 3.01
3336 3403 9.567776 TTCCAATGACAAAACTGAATAGTAAGA 57.432 29.630 0.00 0.00 35.69 2.10
3344 3411 9.638239 GCTATAATTTCCAATGACAAAACTGAA 57.362 29.630 0.00 0.00 0.00 3.02
3345 3412 9.023962 AGCTATAATTTCCAATGACAAAACTGA 57.976 29.630 0.00 0.00 0.00 3.41
3367 3434 9.801873 GGCATTCTGAACATTTTTAAATAGCTA 57.198 29.630 0.00 0.00 0.00 3.32
3368 3435 8.313292 TGGCATTCTGAACATTTTTAAATAGCT 58.687 29.630 0.00 0.00 0.00 3.32
3369 3436 8.477984 TGGCATTCTGAACATTTTTAAATAGC 57.522 30.769 0.00 0.00 0.00 2.97
3371 3438 9.770097 TGTTGGCATTCTGAACATTTTTAAATA 57.230 25.926 0.00 0.00 0.00 1.40
3372 3439 8.674263 TGTTGGCATTCTGAACATTTTTAAAT 57.326 26.923 0.00 0.00 0.00 1.40
3373 3440 8.498054 TTGTTGGCATTCTGAACATTTTTAAA 57.502 26.923 0.00 0.00 30.00 1.52
3374 3441 8.674263 ATTGTTGGCATTCTGAACATTTTTAA 57.326 26.923 0.00 0.00 30.00 1.52
3375 3442 8.309163 GATTGTTGGCATTCTGAACATTTTTA 57.691 30.769 0.00 0.00 30.00 1.52
3376 3443 7.193377 GATTGTTGGCATTCTGAACATTTTT 57.807 32.000 0.00 0.00 30.00 1.94
3377 3444 6.790285 GATTGTTGGCATTCTGAACATTTT 57.210 33.333 0.00 0.00 30.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.