Multiple sequence alignment - TraesCS2D01G107400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G107400 chr2D 100.000 3131 0 0 1 3131 59656877 59660007 0.000000e+00 5782.0
1 TraesCS2D01G107400 chr2D 83.352 871 126 15 1275 2139 60022941 60022084 0.000000e+00 787.0
2 TraesCS2D01G107400 chr2D 81.237 938 140 19 1287 2206 59731306 59730387 0.000000e+00 725.0
3 TraesCS2D01G107400 chr2D 80.553 941 142 23 1287 2206 60015883 60014963 0.000000e+00 686.0
4 TraesCS2D01G107400 chr2D 95.745 282 12 0 2474 2755 55096552 55096833 3.680000e-124 455.0
5 TraesCS2D01G107400 chr2D 95.699 279 12 0 2475 2753 557094813 557094535 1.710000e-122 449.0
6 TraesCS2D01G107400 chr2D 90.043 231 22 1 983 1213 60016196 60015967 6.560000e-77 298.0
7 TraesCS2D01G107400 chr2A 90.757 2218 112 37 256 2426 59586597 59588768 0.000000e+00 2874.0
8 TraesCS2D01G107400 chr2A 82.719 868 123 15 1287 2136 59728158 59727300 0.000000e+00 747.0
9 TraesCS2D01G107400 chr2A 81.573 852 124 23 1287 2135 59873549 59872728 0.000000e+00 673.0
10 TraesCS2D01G107400 chr2A 84.877 648 92 4 1571 2216 59942789 59942146 0.000000e+00 649.0
11 TraesCS2D01G107400 chr2A 87.170 569 73 0 1571 2139 59880118 59879550 0.000000e+00 647.0
12 TraesCS2D01G107400 chr2A 81.801 522 68 11 985 1479 59943440 59942919 2.250000e-111 412.0
13 TraesCS2D01G107400 chr2A 89.130 230 25 0 985 1214 59728479 59728250 1.420000e-73 287.0
14 TraesCS2D01G107400 chr2A 87.967 241 26 1 985 1222 59880768 59880528 6.610000e-72 281.0
15 TraesCS2D01G107400 chr2A 86.341 205 27 1 1276 1479 59880452 59880248 4.060000e-54 222.0
16 TraesCS2D01G107400 chr2A 92.208 154 9 2 1 151 59578615 59578768 6.800000e-52 215.0
17 TraesCS2D01G107400 chr2A 91.453 117 7 1 143 259 59580339 59580452 1.160000e-34 158.0
18 TraesCS2D01G107400 chr2A 87.156 109 14 0 861 969 59728660 59728552 1.180000e-24 124.0
19 TraesCS2D01G107400 chr2A 100.000 55 0 0 2423 2477 59593893 59593947 5.520000e-18 102.0
20 TraesCS2D01G107400 chr2A 91.176 68 6 0 16 83 35581639 35581572 3.320000e-15 93.5
21 TraesCS2D01G107400 chr2B 91.564 652 22 10 731 1350 93016335 93016985 0.000000e+00 869.0
22 TraesCS2D01G107400 chr2B 83.527 947 127 18 1275 2216 93700786 93699864 0.000000e+00 857.0
23 TraesCS2D01G107400 chr2B 87.467 750 46 16 1736 2477 93045187 93045896 0.000000e+00 821.0
24 TraesCS2D01G107400 chr2B 83.659 869 115 11 1287 2136 93139068 93138208 0.000000e+00 793.0
25 TraesCS2D01G107400 chr2B 83.459 399 52 9 828 1214 93139557 93139161 2.970000e-95 359.0
26 TraesCS2D01G107400 chr2B 87.413 286 19 10 2173 2453 93017017 93017290 2.340000e-81 313.0
27 TraesCS2D01G107400 chr2B 90.517 232 22 0 983 1214 93689413 93689182 1.090000e-79 307.0
28 TraesCS2D01G107400 chr2B 89.912 228 18 3 983 1206 93639335 93639109 3.950000e-74 289.0
29 TraesCS2D01G107400 chr2B 88.085 235 22 5 985 1214 93447346 93447113 1.110000e-69 274.0
30 TraesCS2D01G107400 chr2B 92.486 173 13 0 327 499 93004819 93004991 6.710000e-62 248.0
31 TraesCS2D01G107400 chr2B 87.129 202 26 0 1287 1488 93689093 93688892 2.430000e-56 230.0
32 TraesCS2D01G107400 chr2B 88.608 158 10 2 499 656 93016049 93016198 5.330000e-43 185.0
33 TraesCS2D01G107400 chr2B 86.916 107 12 1 863 969 93639513 93639409 5.490000e-23 119.0
34 TraesCS2D01G107400 chr2B 94.366 71 3 1 2930 2999 93019880 93019950 1.190000e-19 108.0
35 TraesCS2D01G107400 chr2B 98.305 59 1 0 676 734 93016196 93016254 1.540000e-18 104.0
36 TraesCS2D01G107400 chr7D 96.057 279 11 0 2475 2753 33195688 33195966 3.680000e-124 455.0
37 TraesCS2D01G107400 chr7D 92.647 68 5 0 16 83 58135173 58135240 7.150000e-17 99.0
38 TraesCS2D01G107400 chr4A 95.714 280 12 0 2474 2753 20787298 20787019 4.760000e-123 451.0
39 TraesCS2D01G107400 chr4A 94.464 289 11 2 2475 2758 224902238 224902526 1.030000e-119 440.0
40 TraesCS2D01G107400 chr4A 92.647 68 5 0 16 83 445200250 445200317 7.150000e-17 99.0
41 TraesCS2D01G107400 chr7A 95.699 279 11 1 2473 2751 341621778 341621501 6.160000e-122 448.0
42 TraesCS2D01G107400 chr6D 95.341 279 13 0 2475 2753 164538999 164539277 7.970000e-121 444.0
43 TraesCS2D01G107400 chr6D 100.000 34 0 0 813 846 317417673 317417706 2.610000e-06 63.9
44 TraesCS2D01G107400 chr1A 95.341 279 9 1 2475 2749 138025396 138025674 1.030000e-119 440.0
45 TraesCS2D01G107400 chr1A 94.444 288 12 1 2475 2758 208402489 208402202 1.030000e-119 440.0
46 TraesCS2D01G107400 chr1A 89.744 78 8 0 1 78 517639970 517640047 1.990000e-17 100.0
47 TraesCS2D01G107400 chrUn 89.024 82 9 0 1 82 85693434 85693515 5.520000e-18 102.0
48 TraesCS2D01G107400 chr3A 88.750 80 7 2 5 84 82345462 82345539 2.570000e-16 97.1
49 TraesCS2D01G107400 chr5A 87.059 85 7 2 5 89 549932691 549932611 3.320000e-15 93.5
50 TraesCS2D01G107400 chr7B 86.585 82 10 1 1 82 131387123 131387203 4.300000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G107400 chr2D 59656877 59660007 3130 False 5782.000000 5782 100.000000 1 3131 1 chr2D.!!$F2 3130
1 TraesCS2D01G107400 chr2D 60022084 60022941 857 True 787.000000 787 83.352000 1275 2139 1 chr2D.!!$R2 864
2 TraesCS2D01G107400 chr2D 59730387 59731306 919 True 725.000000 725 81.237000 1287 2206 1 chr2D.!!$R1 919
3 TraesCS2D01G107400 chr2D 60014963 60016196 1233 True 492.000000 686 85.298000 983 2206 2 chr2D.!!$R4 1223
4 TraesCS2D01G107400 chr2A 59586597 59588768 2171 False 2874.000000 2874 90.757000 256 2426 1 chr2A.!!$F1 2170
5 TraesCS2D01G107400 chr2A 59872728 59873549 821 True 673.000000 673 81.573000 1287 2135 1 chr2A.!!$R2 848
6 TraesCS2D01G107400 chr2A 59942146 59943440 1294 True 530.500000 649 83.339000 985 2216 2 chr2A.!!$R5 1231
7 TraesCS2D01G107400 chr2A 59727300 59728660 1360 True 386.000000 747 86.335000 861 2136 3 chr2A.!!$R3 1275
8 TraesCS2D01G107400 chr2A 59879550 59880768 1218 True 383.333333 647 87.159333 985 2139 3 chr2A.!!$R4 1154
9 TraesCS2D01G107400 chr2B 93699864 93700786 922 True 857.000000 857 83.527000 1275 2216 1 chr2B.!!$R2 941
10 TraesCS2D01G107400 chr2B 93045187 93045896 709 False 821.000000 821 87.467000 1736 2477 1 chr2B.!!$F2 741
11 TraesCS2D01G107400 chr2B 93138208 93139557 1349 True 576.000000 793 83.559000 828 2136 2 chr2B.!!$R3 1308
12 TraesCS2D01G107400 chr2B 93016049 93019950 3901 False 315.800000 869 92.051200 499 2999 5 chr2B.!!$F3 2500
13 TraesCS2D01G107400 chr2B 93688892 93689413 521 True 268.500000 307 88.823000 983 1488 2 chr2B.!!$R5 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
443 449 0.459585 TCCGCGCTCATTCCTAACAC 60.460 55.0 5.56 0.0 0.00 3.32 F
922 1020 1.367659 GTGCACCTGAGCTGAATCTC 58.632 55.0 5.22 0.0 34.99 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1502 1749 0.465097 AAGGAGCCGAGCATCCAATG 60.465 55.0 12.89 0.0 38.12 2.82 R
2908 4492 0.179004 ATTGACAAAGACACGGGGCA 60.179 50.0 0.00 0.0 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 6.926280 TCTTTGCATATTACAAAAAGTGCG 57.074 33.333 0.00 0.00 36.63 5.34
79 80 6.673106 TCTTTGCATATTACAAAAAGTGCGA 58.327 32.000 0.00 0.00 36.63 5.10
80 81 7.312154 TCTTTGCATATTACAAAAAGTGCGAT 58.688 30.769 0.00 0.00 36.63 4.58
81 82 7.812191 TCTTTGCATATTACAAAAAGTGCGATT 59.188 29.630 0.00 0.00 36.63 3.34
82 83 7.881643 TTGCATATTACAAAAAGTGCGATTT 57.118 28.000 0.00 0.00 33.90 2.17
83 84 8.972262 TTGCATATTACAAAAAGTGCGATTTA 57.028 26.923 0.00 0.00 33.90 1.40
84 85 9.579768 TTGCATATTACAAAAAGTGCGATTTAT 57.420 25.926 0.00 0.00 33.90 1.40
85 86 9.018716 TGCATATTACAAAAAGTGCGATTTATG 57.981 29.630 0.00 0.00 33.90 1.90
86 87 7.998212 GCATATTACAAAAAGTGCGATTTATGC 59.002 33.333 0.00 0.00 0.00 3.14
87 88 6.885735 ATTACAAAAAGTGCGATTTATGCC 57.114 33.333 0.00 0.00 0.00 4.40
88 89 4.250116 ACAAAAAGTGCGATTTATGCCA 57.750 36.364 0.00 0.00 0.00 4.92
89 90 4.626042 ACAAAAAGTGCGATTTATGCCAA 58.374 34.783 0.00 0.00 0.00 4.52
90 91 5.237048 ACAAAAAGTGCGATTTATGCCAAT 58.763 33.333 0.00 0.00 0.00 3.16
91 92 5.700373 ACAAAAAGTGCGATTTATGCCAATT 59.300 32.000 0.00 0.00 0.00 2.32
92 93 6.128580 ACAAAAAGTGCGATTTATGCCAATTC 60.129 34.615 0.00 0.00 0.00 2.17
93 94 4.717233 AAGTGCGATTTATGCCAATTCA 57.283 36.364 0.00 0.00 0.00 2.57
94 95 4.924305 AGTGCGATTTATGCCAATTCAT 57.076 36.364 0.00 0.00 0.00 2.57
95 96 5.266733 AGTGCGATTTATGCCAATTCATT 57.733 34.783 0.00 0.00 0.00 2.57
96 97 5.284079 AGTGCGATTTATGCCAATTCATTC 58.716 37.500 0.00 0.00 0.00 2.67
97 98 5.068198 AGTGCGATTTATGCCAATTCATTCT 59.932 36.000 0.00 0.00 0.00 2.40
98 99 5.750067 GTGCGATTTATGCCAATTCATTCTT 59.250 36.000 0.00 0.00 0.00 2.52
99 100 6.256321 GTGCGATTTATGCCAATTCATTCTTT 59.744 34.615 0.00 0.00 0.00 2.52
100 101 7.434897 GTGCGATTTATGCCAATTCATTCTTTA 59.565 33.333 0.00 0.00 0.00 1.85
101 102 8.143193 TGCGATTTATGCCAATTCATTCTTTAT 58.857 29.630 0.00 0.00 0.00 1.40
102 103 8.981647 GCGATTTATGCCAATTCATTCTTTATT 58.018 29.630 0.00 0.00 0.00 1.40
122 123 9.618410 CTTTATTTGAAAAACTGCTTTTGTACG 57.382 29.630 0.00 0.00 37.36 3.67
123 124 8.912787 TTATTTGAAAAACTGCTTTTGTACGA 57.087 26.923 0.00 0.00 37.36 3.43
124 125 7.820044 ATTTGAAAAACTGCTTTTGTACGAA 57.180 28.000 0.00 0.00 37.36 3.85
125 126 7.639162 TTTGAAAAACTGCTTTTGTACGAAA 57.361 28.000 8.03 8.03 37.36 3.46
126 127 7.639162 TTGAAAAACTGCTTTTGTACGAAAA 57.361 28.000 9.55 6.43 37.36 2.29
127 128 7.820044 TGAAAAACTGCTTTTGTACGAAAAT 57.180 28.000 9.55 0.00 37.36 1.82
128 129 8.245701 TGAAAAACTGCTTTTGTACGAAAATT 57.754 26.923 9.55 0.27 37.36 1.82
129 130 8.376942 TGAAAAACTGCTTTTGTACGAAAATTC 58.623 29.630 9.55 3.23 37.36 2.17
130 131 6.822073 AAACTGCTTTTGTACGAAAATTCC 57.178 33.333 9.55 0.39 0.00 3.01
131 132 5.508200 ACTGCTTTTGTACGAAAATTCCA 57.492 34.783 9.55 4.38 0.00 3.53
132 133 5.278604 ACTGCTTTTGTACGAAAATTCCAC 58.721 37.500 9.55 0.00 0.00 4.02
133 134 5.163602 ACTGCTTTTGTACGAAAATTCCACA 60.164 36.000 9.55 1.74 0.00 4.17
134 135 5.277825 TGCTTTTGTACGAAAATTCCACAG 58.722 37.500 9.55 0.00 0.00 3.66
135 136 5.163602 TGCTTTTGTACGAAAATTCCACAGT 60.164 36.000 9.55 0.00 0.00 3.55
136 137 6.038382 TGCTTTTGTACGAAAATTCCACAGTA 59.962 34.615 9.55 0.00 0.00 2.74
137 138 6.358822 GCTTTTGTACGAAAATTCCACAGTAC 59.641 38.462 9.55 0.00 36.11 2.73
138 139 7.556733 TTTTGTACGAAAATTCCACAGTACT 57.443 32.000 5.77 0.00 36.41 2.73
139 140 8.659925 TTTTGTACGAAAATTCCACAGTACTA 57.340 30.769 5.77 0.00 36.41 1.82
140 141 7.878477 TTGTACGAAAATTCCACAGTACTAG 57.122 36.000 0.00 0.00 36.41 2.57
141 142 7.218228 TGTACGAAAATTCCACAGTACTAGA 57.782 36.000 0.00 0.00 36.41 2.43
142 143 7.086376 TGTACGAAAATTCCACAGTACTAGAC 58.914 38.462 0.00 0.00 36.41 2.59
143 144 6.342338 ACGAAAATTCCACAGTACTAGACT 57.658 37.500 0.00 0.00 39.82 3.24
144 145 6.756221 ACGAAAATTCCACAGTACTAGACTT 58.244 36.000 0.00 0.00 35.64 3.01
145 146 7.889469 ACGAAAATTCCACAGTACTAGACTTA 58.111 34.615 0.00 0.00 35.64 2.24
146 147 8.529476 ACGAAAATTCCACAGTACTAGACTTAT 58.471 33.333 0.00 0.00 35.64 1.73
147 148 9.367444 CGAAAATTCCACAGTACTAGACTTATT 57.633 33.333 0.00 0.00 35.64 1.40
206 207 6.680874 ATTGTGTGCAATTTGTCATTGTTT 57.319 29.167 0.00 0.00 42.19 2.83
207 208 5.466432 TGTGTGCAATTTGTCATTGTTTG 57.534 34.783 0.00 0.00 0.00 2.93
208 209 4.934001 TGTGTGCAATTTGTCATTGTTTGT 59.066 33.333 0.00 0.00 0.00 2.83
209 210 5.410746 TGTGTGCAATTTGTCATTGTTTGTT 59.589 32.000 0.00 0.00 0.00 2.83
210 211 6.072838 TGTGTGCAATTTGTCATTGTTTGTTT 60.073 30.769 0.00 0.00 0.00 2.83
211 212 6.800892 GTGTGCAATTTGTCATTGTTTGTTTT 59.199 30.769 0.00 0.00 0.00 2.43
212 213 7.959651 GTGTGCAATTTGTCATTGTTTGTTTTA 59.040 29.630 0.00 0.00 0.00 1.52
213 214 8.173775 TGTGCAATTTGTCATTGTTTGTTTTAG 58.826 29.630 0.00 0.00 0.00 1.85
214 215 8.386606 GTGCAATTTGTCATTGTTTGTTTTAGA 58.613 29.630 0.00 0.00 0.00 2.10
215 216 9.107177 TGCAATTTGTCATTGTTTGTTTTAGAT 57.893 25.926 0.00 0.00 0.00 1.98
238 239 0.955905 TTTTTAGCCCCACGTTCTGC 59.044 50.000 0.00 0.00 0.00 4.26
240 241 2.102109 TTTAGCCCCACGTTCTGCGA 62.102 55.000 0.00 0.00 44.77 5.10
241 242 1.895020 TTAGCCCCACGTTCTGCGAT 61.895 55.000 0.00 0.00 44.77 4.58
242 243 1.895020 TAGCCCCACGTTCTGCGATT 61.895 55.000 0.00 0.00 44.77 3.34
243 244 3.039202 GCCCCACGTTCTGCGATTG 62.039 63.158 0.00 0.00 44.77 2.67
244 245 2.480555 CCCACGTTCTGCGATTGC 59.519 61.111 0.00 0.00 44.77 3.56
259 260 5.409643 GCGATTGCATGTACTTCATTAGT 57.590 39.130 0.00 0.00 42.15 2.24
260 261 5.200454 GCGATTGCATGTACTTCATTAGTG 58.800 41.667 0.00 0.00 42.15 2.74
286 287 0.818040 GCTTCGGAGGTTGTTGTGGT 60.818 55.000 0.00 0.00 0.00 4.16
367 368 7.716799 AATAGACATGAGTTCAGTCTCTCTT 57.283 36.000 0.00 7.36 41.39 2.85
414 420 5.385198 TCACATACCTTGCTCTTTTTCCTT 58.615 37.500 0.00 0.00 0.00 3.36
443 449 0.459585 TCCGCGCTCATTCCTAACAC 60.460 55.000 5.56 0.00 0.00 3.32
451 457 4.072131 GCTCATTCCTAACACCTGAACAA 58.928 43.478 0.00 0.00 0.00 2.83
453 459 5.183904 GCTCATTCCTAACACCTGAACAAAT 59.816 40.000 0.00 0.00 0.00 2.32
454 460 6.294731 GCTCATTCCTAACACCTGAACAAATT 60.295 38.462 0.00 0.00 0.00 1.82
455 461 7.595819 TCATTCCTAACACCTGAACAAATTT 57.404 32.000 0.00 0.00 0.00 1.82
456 462 8.017418 TCATTCCTAACACCTGAACAAATTTT 57.983 30.769 0.00 0.00 0.00 1.82
476 482 5.885449 TTTTTGGTCAGATCCCATGTTTT 57.115 34.783 0.00 0.00 0.00 2.43
477 483 4.870123 TTTGGTCAGATCCCATGTTTTG 57.130 40.909 0.00 0.00 0.00 2.44
478 484 3.524095 TGGTCAGATCCCATGTTTTGT 57.476 42.857 0.00 0.00 0.00 2.83
479 485 3.843422 TGGTCAGATCCCATGTTTTGTT 58.157 40.909 0.00 0.00 0.00 2.83
480 486 4.222336 TGGTCAGATCCCATGTTTTGTTT 58.778 39.130 0.00 0.00 0.00 2.83
481 487 4.039004 TGGTCAGATCCCATGTTTTGTTTG 59.961 41.667 0.00 0.00 0.00 2.93
482 488 4.039124 GGTCAGATCCCATGTTTTGTTTGT 59.961 41.667 0.00 0.00 0.00 2.83
483 489 5.222631 GTCAGATCCCATGTTTTGTTTGTC 58.777 41.667 0.00 0.00 0.00 3.18
484 490 4.280677 TCAGATCCCATGTTTTGTTTGTCC 59.719 41.667 0.00 0.00 0.00 4.02
485 491 4.039004 CAGATCCCATGTTTTGTTTGTCCA 59.961 41.667 0.00 0.00 0.00 4.02
486 492 3.810310 TCCCATGTTTTGTTTGTCCAC 57.190 42.857 0.00 0.00 0.00 4.02
487 493 3.099905 TCCCATGTTTTGTTTGTCCACA 58.900 40.909 0.00 0.00 0.00 4.17
488 494 3.708631 TCCCATGTTTTGTTTGTCCACAT 59.291 39.130 0.00 0.00 0.00 3.21
489 495 3.808726 CCCATGTTTTGTTTGTCCACATG 59.191 43.478 4.00 4.00 42.89 3.21
490 496 4.440880 CCATGTTTTGTTTGTCCACATGT 58.559 39.130 9.17 0.00 42.08 3.21
491 497 4.874966 CCATGTTTTGTTTGTCCACATGTT 59.125 37.500 0.00 0.00 42.08 2.71
492 498 6.045318 CCATGTTTTGTTTGTCCACATGTTA 58.955 36.000 0.00 0.00 42.08 2.41
512 518 8.742188 CATGTTATCGTTGTATGCAAAATTACC 58.258 33.333 0.00 0.00 36.22 2.85
552 558 1.683011 CGAGGGTGAATTGCCTTGGAT 60.683 52.381 0.00 0.00 0.00 3.41
575 581 8.566260 GGATAAATTATAGCATGGAGATGATGC 58.434 37.037 0.00 0.00 45.56 3.91
583 589 3.473625 CATGGAGATGATGCTAAGCACA 58.526 45.455 0.00 0.00 43.04 4.57
625 631 9.971922 CTATAAGCTAAGCCAATTAATTTTGCT 57.028 29.630 13.66 13.66 34.08 3.91
627 633 6.041423 AGCTAAGCCAATTAATTTTGCTGT 57.959 33.333 18.11 12.47 32.07 4.40
628 634 6.466812 AGCTAAGCCAATTAATTTTGCTGTT 58.533 32.000 18.11 9.52 32.07 3.16
629 635 6.936335 AGCTAAGCCAATTAATTTTGCTGTTT 59.064 30.769 18.11 8.99 32.07 2.83
630 636 7.445096 AGCTAAGCCAATTAATTTTGCTGTTTT 59.555 29.630 18.11 8.73 32.07 2.43
631 637 8.075574 GCTAAGCCAATTAATTTTGCTGTTTTT 58.924 29.630 18.11 8.46 0.00 1.94
724 730 1.852067 ATGCGGCCAAGTTTGTCGAC 61.852 55.000 9.11 9.11 0.00 4.20
777 867 2.355244 GATCGACCGGCTAGCTGC 60.355 66.667 18.67 4.54 41.94 5.25
922 1020 1.367659 GTGCACCTGAGCTGAATCTC 58.632 55.000 5.22 0.00 34.99 2.75
1032 1190 1.742268 GCCTCTTGCATTTCTCTGGTC 59.258 52.381 0.00 0.00 40.77 4.02
1091 1249 2.564975 CCCGACGTTCTACAGCGT 59.435 61.111 0.00 0.00 44.50 5.07
1235 1450 7.023575 AGTTTCGCATAACTAATTTGCTTGAG 58.976 34.615 0.00 0.00 36.62 3.02
1284 1523 2.712539 CCGTGCGTGTTTTGCTGA 59.287 55.556 0.00 0.00 0.00 4.26
1374 1613 3.682292 GAGGGGCTTCGGCGTCATT 62.682 63.158 6.85 0.00 42.91 2.57
1499 1746 7.203218 TCATCATCTTACGAAGACTTACATGG 58.797 38.462 0.00 0.00 41.01 3.66
1502 1749 7.033791 TCATCTTACGAAGACTTACATGGTTC 58.966 38.462 0.00 0.00 41.01 3.62
1518 1765 0.659957 GTTCATTGGATGCTCGGCTC 59.340 55.000 0.00 0.00 0.00 4.70
1524 1784 0.038166 TGGATGCTCGGCTCCTTTTT 59.962 50.000 12.10 0.00 32.47 1.94
1528 1788 1.981256 TGCTCGGCTCCTTTTTCTTT 58.019 45.000 0.00 0.00 0.00 2.52
1530 1790 2.812011 TGCTCGGCTCCTTTTTCTTTAC 59.188 45.455 0.00 0.00 0.00 2.01
1532 1792 3.365064 GCTCGGCTCCTTTTTCTTTACAC 60.365 47.826 0.00 0.00 0.00 2.90
1536 1796 4.379499 CGGCTCCTTTTTCTTTACACCATC 60.379 45.833 0.00 0.00 0.00 3.51
1537 1797 4.522789 GGCTCCTTTTTCTTTACACCATCA 59.477 41.667 0.00 0.00 0.00 3.07
1538 1798 5.185828 GGCTCCTTTTTCTTTACACCATCAT 59.814 40.000 0.00 0.00 0.00 2.45
1539 1799 6.377146 GGCTCCTTTTTCTTTACACCATCATA 59.623 38.462 0.00 0.00 0.00 2.15
1540 1800 7.068716 GGCTCCTTTTTCTTTACACCATCATAT 59.931 37.037 0.00 0.00 0.00 1.78
1541 1801 9.120538 GCTCCTTTTTCTTTACACCATCATATA 57.879 33.333 0.00 0.00 0.00 0.86
1565 1835 7.763172 ATAATCGTTTGTTTGCTTTTTGTCA 57.237 28.000 0.00 0.00 0.00 3.58
1656 1938 3.423154 GCAAACAGCGACCTCCCG 61.423 66.667 0.00 0.00 0.00 5.14
2121 2412 1.303155 GCTCAGCTGCTCCAAGGTT 60.303 57.895 9.47 0.00 0.00 3.50
2148 2441 4.276460 CGTGATTGACGTACATGTCGATA 58.724 43.478 19.74 8.69 41.90 2.92
2236 2535 1.298859 GCACTTAGCAACCCGGTCAG 61.299 60.000 0.00 0.00 44.79 3.51
2257 2556 1.878522 CGACTACTCGGTGCATGCC 60.879 63.158 16.68 6.42 36.16 4.40
2294 2593 0.248458 CAAGTTTCAAACGCGCACCT 60.248 50.000 5.73 0.00 36.23 4.00
2409 2712 3.194542 TGGTGCCCATGCTTTAATGTAAC 59.805 43.478 0.00 0.00 38.71 2.50
2477 2782 1.732259 GTGACATGCCCACGTCTTAAG 59.268 52.381 0.00 0.00 33.18 1.85
2478 2783 1.621317 TGACATGCCCACGTCTTAAGA 59.379 47.619 0.00 0.00 33.18 2.10
2479 2784 2.000447 GACATGCCCACGTCTTAAGAC 59.000 52.381 23.25 23.25 41.47 3.01
2480 2785 1.623811 ACATGCCCACGTCTTAAGACT 59.376 47.619 28.30 15.52 42.66 3.24
2481 2786 2.829720 ACATGCCCACGTCTTAAGACTA 59.170 45.455 28.30 11.44 42.66 2.59
2482 2787 3.119101 ACATGCCCACGTCTTAAGACTAG 60.119 47.826 28.30 20.73 42.66 2.57
2483 2788 2.522185 TGCCCACGTCTTAAGACTAGT 58.478 47.619 28.30 18.96 42.66 2.57
2484 2789 2.490903 TGCCCACGTCTTAAGACTAGTC 59.509 50.000 28.30 15.41 42.66 2.59
2485 2790 2.490903 GCCCACGTCTTAAGACTAGTCA 59.509 50.000 28.30 1.95 42.66 3.41
2486 2791 3.130693 GCCCACGTCTTAAGACTAGTCAT 59.869 47.826 28.30 15.53 42.66 3.06
2487 2792 4.337555 GCCCACGTCTTAAGACTAGTCATA 59.662 45.833 28.30 14.44 42.66 2.15
2488 2793 5.163581 GCCCACGTCTTAAGACTAGTCATAA 60.164 44.000 28.30 20.46 42.66 1.90
2489 2794 6.461231 GCCCACGTCTTAAGACTAGTCATAAT 60.461 42.308 28.30 10.13 42.66 1.28
2490 2795 6.918569 CCCACGTCTTAAGACTAGTCATAATG 59.081 42.308 28.30 16.10 42.66 1.90
2491 2796 6.918569 CCACGTCTTAAGACTAGTCATAATGG 59.081 42.308 28.30 20.21 42.66 3.16
2492 2797 7.201794 CCACGTCTTAAGACTAGTCATAATGGA 60.202 40.741 28.30 14.79 42.66 3.41
2493 2798 7.858382 CACGTCTTAAGACTAGTCATAATGGAG 59.142 40.741 28.30 15.10 42.66 3.86
2494 2799 7.774157 ACGTCTTAAGACTAGTCATAATGGAGA 59.226 37.037 28.30 13.05 42.66 3.71
2495 2800 8.286800 CGTCTTAAGACTAGTCATAATGGAGAG 58.713 40.741 28.30 10.11 42.66 3.20
2496 2801 9.127277 GTCTTAAGACTAGTCATAATGGAGAGT 57.873 37.037 25.30 0.00 41.65 3.24
2501 2806 9.482175 AAGACTAGTCATAATGGAGAGTAACTT 57.518 33.333 24.44 1.28 0.00 2.66
2513 2818 9.750783 AATGGAGAGTAACTTAGAGTAGTAACA 57.249 33.333 0.00 0.00 0.00 2.41
2514 2819 9.924010 ATGGAGAGTAACTTAGAGTAGTAACAT 57.076 33.333 0.00 0.00 0.00 2.71
2515 2820 9.175312 TGGAGAGTAACTTAGAGTAGTAACATG 57.825 37.037 0.00 0.00 0.00 3.21
2516 2821 8.130469 GGAGAGTAACTTAGAGTAGTAACATGC 58.870 40.741 0.00 0.00 0.00 4.06
2517 2822 8.577048 AGAGTAACTTAGAGTAGTAACATGCA 57.423 34.615 0.00 0.00 0.00 3.96
2518 2823 9.191479 AGAGTAACTTAGAGTAGTAACATGCAT 57.809 33.333 0.00 0.00 0.00 3.96
2545 2850 8.970859 TGTTACTAGTCTATGTTACTACCTCC 57.029 38.462 0.00 0.00 0.00 4.30
2546 2851 8.551440 TGTTACTAGTCTATGTTACTACCTCCA 58.449 37.037 0.00 0.00 0.00 3.86
2547 2852 8.835439 GTTACTAGTCTATGTTACTACCTCCAC 58.165 40.741 0.00 0.00 0.00 4.02
2548 2853 6.966751 ACTAGTCTATGTTACTACCTCCACA 58.033 40.000 0.00 0.00 0.00 4.17
2549 2854 7.055378 ACTAGTCTATGTTACTACCTCCACAG 58.945 42.308 0.00 0.00 0.00 3.66
2550 2855 5.828871 AGTCTATGTTACTACCTCCACAGT 58.171 41.667 0.00 0.00 0.00 3.55
2551 2856 5.652891 AGTCTATGTTACTACCTCCACAGTG 59.347 44.000 0.00 0.00 0.00 3.66
2552 2857 4.954202 TCTATGTTACTACCTCCACAGTGG 59.046 45.833 14.19 14.19 39.43 4.00
2553 2858 2.253610 TGTTACTACCTCCACAGTGGG 58.746 52.381 20.14 10.16 38.32 4.61
2554 2859 2.254508 GTTACTACCTCCACAGTGGGT 58.745 52.381 20.14 12.79 38.32 4.51
2555 2860 3.181419 TGTTACTACCTCCACAGTGGGTA 60.181 47.826 20.14 13.24 38.32 3.69
2557 2862 2.233305 CTACCTCCACAGTGGGTAGT 57.767 55.000 20.14 15.82 44.30 2.73
2558 2863 3.377253 CTACCTCCACAGTGGGTAGTA 57.623 52.381 20.14 16.08 44.30 1.82
2559 2864 2.708037 ACCTCCACAGTGGGTAGTAA 57.292 50.000 20.14 0.00 38.32 2.24
2560 2865 2.254508 ACCTCCACAGTGGGTAGTAAC 58.745 52.381 20.14 0.00 38.32 2.50
2561 2866 2.253610 CCTCCACAGTGGGTAGTAACA 58.746 52.381 20.14 0.00 38.32 2.41
2562 2867 2.838202 CCTCCACAGTGGGTAGTAACAT 59.162 50.000 20.14 0.00 38.32 2.71
2563 2868 4.028131 CCTCCACAGTGGGTAGTAACATA 58.972 47.826 20.14 0.00 38.32 2.29
2564 2869 4.654262 CCTCCACAGTGGGTAGTAACATAT 59.346 45.833 20.14 0.00 38.32 1.78
2565 2870 5.453339 CCTCCACAGTGGGTAGTAACATATG 60.453 48.000 20.14 0.00 38.32 1.78
2566 2871 5.027460 TCCACAGTGGGTAGTAACATATGT 58.973 41.667 20.14 1.41 38.32 2.29
2567 2872 5.105106 TCCACAGTGGGTAGTAACATATGTG 60.105 44.000 20.14 8.26 38.32 3.21
2568 2873 5.338056 CCACAGTGGGTAGTAACATATGTGT 60.338 44.000 12.40 2.63 36.37 3.72
2569 2874 6.799296 CCACAGTGGGTAGTAACATATGTGTT 60.799 42.308 12.40 12.73 41.76 3.32
2570 2875 8.746927 CCACAGTGGGTAGTAACATATGTGTTG 61.747 44.444 17.19 0.62 40.34 3.33
2580 2885 5.648178 AACATATGTGTTGTGTCATGCAT 57.352 34.783 9.63 0.00 46.43 3.96
2581 2886 5.239359 ACATATGTGTTGTGTCATGCATC 57.761 39.130 7.78 0.00 34.01 3.91
2582 2887 4.701171 ACATATGTGTTGTGTCATGCATCA 59.299 37.500 7.78 0.00 34.01 3.07
2583 2888 3.564235 ATGTGTTGTGTCATGCATCAC 57.436 42.857 10.76 10.76 35.43 3.06
2584 2889 2.574450 TGTGTTGTGTCATGCATCACT 58.426 42.857 16.78 0.00 35.82 3.41
2585 2890 2.950975 TGTGTTGTGTCATGCATCACTT 59.049 40.909 16.78 0.00 35.82 3.16
2586 2891 3.003585 TGTGTTGTGTCATGCATCACTTC 59.996 43.478 16.78 11.17 35.82 3.01
2587 2892 3.003585 GTGTTGTGTCATGCATCACTTCA 59.996 43.478 16.78 13.00 35.82 3.02
2588 2893 3.822167 TGTTGTGTCATGCATCACTTCAT 59.178 39.130 16.78 0.00 35.82 2.57
2589 2894 4.278919 TGTTGTGTCATGCATCACTTCATT 59.721 37.500 16.78 0.00 35.82 2.57
2590 2895 5.221283 TGTTGTGTCATGCATCACTTCATTT 60.221 36.000 16.78 0.00 35.82 2.32
2591 2896 6.016443 TGTTGTGTCATGCATCACTTCATTTA 60.016 34.615 16.78 0.00 35.82 1.40
2592 2897 6.762702 TGTGTCATGCATCACTTCATTTAT 57.237 33.333 16.78 0.00 35.82 1.40
2593 2898 7.160547 TGTGTCATGCATCACTTCATTTATT 57.839 32.000 16.78 0.00 35.82 1.40
2594 2899 8.278729 TGTGTCATGCATCACTTCATTTATTA 57.721 30.769 16.78 0.00 35.82 0.98
2595 2900 8.400186 TGTGTCATGCATCACTTCATTTATTAG 58.600 33.333 16.78 0.00 35.82 1.73
2596 2901 7.859377 GTGTCATGCATCACTTCATTTATTAGG 59.141 37.037 1.37 0.00 0.00 2.69
2597 2902 7.557358 TGTCATGCATCACTTCATTTATTAGGT 59.443 33.333 1.37 0.00 0.00 3.08
2598 2903 8.408601 GTCATGCATCACTTCATTTATTAGGTT 58.591 33.333 0.00 0.00 0.00 3.50
2599 2904 8.407832 TCATGCATCACTTCATTTATTAGGTTG 58.592 33.333 0.00 0.00 0.00 3.77
2600 2905 7.701539 TGCATCACTTCATTTATTAGGTTGT 57.298 32.000 0.00 0.00 0.00 3.32
2601 2906 8.800370 TGCATCACTTCATTTATTAGGTTGTA 57.200 30.769 0.00 0.00 0.00 2.41
2602 2907 8.892723 TGCATCACTTCATTTATTAGGTTGTAG 58.107 33.333 0.00 0.00 0.00 2.74
2603 2908 9.109393 GCATCACTTCATTTATTAGGTTGTAGA 57.891 33.333 0.00 0.00 0.00 2.59
2606 2911 9.871238 TCACTTCATTTATTAGGTTGTAGACTC 57.129 33.333 0.00 0.00 0.00 3.36
2607 2912 9.653287 CACTTCATTTATTAGGTTGTAGACTCA 57.347 33.333 0.00 0.00 0.00 3.41
2617 2922 8.833231 TTAGGTTGTAGACTCATCTTTTCTTG 57.167 34.615 0.00 0.00 36.29 3.02
2618 2923 7.067496 AGGTTGTAGACTCATCTTTTCTTGA 57.933 36.000 0.00 0.00 36.29 3.02
2619 2924 7.684529 AGGTTGTAGACTCATCTTTTCTTGAT 58.315 34.615 0.00 0.00 36.29 2.57
2620 2925 8.816894 AGGTTGTAGACTCATCTTTTCTTGATA 58.183 33.333 0.00 0.00 36.29 2.15
2621 2926 9.606631 GGTTGTAGACTCATCTTTTCTTGATAT 57.393 33.333 0.00 0.00 36.29 1.63
2624 2929 9.591792 TGTAGACTCATCTTTTCTTGATATGTG 57.408 33.333 0.00 0.00 36.29 3.21
2625 2930 9.593134 GTAGACTCATCTTTTCTTGATATGTGT 57.407 33.333 0.00 0.00 36.29 3.72
2626 2931 8.489990 AGACTCATCTTTTCTTGATATGTGTG 57.510 34.615 0.00 0.00 0.00 3.82
2627 2932 8.316946 AGACTCATCTTTTCTTGATATGTGTGA 58.683 33.333 0.00 0.00 0.00 3.58
2628 2933 9.107177 GACTCATCTTTTCTTGATATGTGTGAT 57.893 33.333 0.00 0.00 0.00 3.06
2655 2960 6.845758 ACAGTAACTAGCTATGTTACCACA 57.154 37.500 25.92 6.86 46.31 4.17
2656 2961 7.419711 ACAGTAACTAGCTATGTTACCACAT 57.580 36.000 25.92 14.84 46.31 3.21
2657 2962 7.265673 ACAGTAACTAGCTATGTTACCACATG 58.734 38.462 25.92 22.03 46.31 3.21
2658 2963 7.093465 ACAGTAACTAGCTATGTTACCACATGT 60.093 37.037 25.92 22.41 46.31 3.21
2659 2964 7.435488 CAGTAACTAGCTATGTTACCACATGTC 59.565 40.741 25.92 11.54 46.31 3.06
2660 2965 6.546428 AACTAGCTATGTTACCACATGTCT 57.454 37.500 0.00 0.00 43.92 3.41
2661 2966 6.150396 ACTAGCTATGTTACCACATGTCTC 57.850 41.667 0.00 0.00 43.92 3.36
2662 2967 5.894393 ACTAGCTATGTTACCACATGTCTCT 59.106 40.000 0.00 0.00 43.92 3.10
2663 2968 5.683876 AGCTATGTTACCACATGTCTCTT 57.316 39.130 0.00 0.00 43.92 2.85
2664 2969 6.054860 AGCTATGTTACCACATGTCTCTTT 57.945 37.500 0.00 0.00 43.92 2.52
2665 2970 6.476378 AGCTATGTTACCACATGTCTCTTTT 58.524 36.000 0.00 0.00 43.92 2.27
2666 2971 6.942576 AGCTATGTTACCACATGTCTCTTTTT 59.057 34.615 0.00 0.00 43.92 1.94
2667 2972 7.119846 AGCTATGTTACCACATGTCTCTTTTTC 59.880 37.037 0.00 0.00 43.92 2.29
2668 2973 7.119846 GCTATGTTACCACATGTCTCTTTTTCT 59.880 37.037 0.00 0.00 43.92 2.52
2669 2974 7.823745 ATGTTACCACATGTCTCTTTTTCTT 57.176 32.000 0.00 0.00 42.46 2.52
2670 2975 7.259290 TGTTACCACATGTCTCTTTTTCTTC 57.741 36.000 0.00 0.00 0.00 2.87
2671 2976 6.826231 TGTTACCACATGTCTCTTTTTCTTCA 59.174 34.615 0.00 0.00 0.00 3.02
2672 2977 7.502226 TGTTACCACATGTCTCTTTTTCTTCAT 59.498 33.333 0.00 0.00 0.00 2.57
2673 2978 6.966534 ACCACATGTCTCTTTTTCTTCATT 57.033 33.333 0.00 0.00 0.00 2.57
2674 2979 9.567776 TTACCACATGTCTCTTTTTCTTCATTA 57.432 29.630 0.00 0.00 0.00 1.90
2675 2980 8.463930 ACCACATGTCTCTTTTTCTTCATTAA 57.536 30.769 0.00 0.00 0.00 1.40
2676 2981 9.082313 ACCACATGTCTCTTTTTCTTCATTAAT 57.918 29.630 0.00 0.00 0.00 1.40
2677 2982 9.918630 CCACATGTCTCTTTTTCTTCATTAATT 57.081 29.630 0.00 0.00 0.00 1.40
2685 2990 9.859427 CTCTTTTTCTTCATTAATTACATGCCA 57.141 29.630 0.00 0.00 0.00 4.92
2686 2991 9.638239 TCTTTTTCTTCATTAATTACATGCCAC 57.362 29.630 0.00 0.00 0.00 5.01
2687 2992 9.421806 CTTTTTCTTCATTAATTACATGCCACA 57.578 29.630 0.00 0.00 0.00 4.17
2688 2993 9.941325 TTTTTCTTCATTAATTACATGCCACAT 57.059 25.926 0.00 0.00 0.00 3.21
2689 2994 9.585099 TTTTCTTCATTAATTACATGCCACATC 57.415 29.630 0.00 0.00 0.00 3.06
2690 2995 7.878547 TCTTCATTAATTACATGCCACATCA 57.121 32.000 0.00 0.00 0.00 3.07
2691 2996 8.467963 TCTTCATTAATTACATGCCACATCAT 57.532 30.769 0.00 0.00 0.00 2.45
2692 2997 8.570488 TCTTCATTAATTACATGCCACATCATC 58.430 33.333 0.00 0.00 0.00 2.92
2693 2998 7.218228 TCATTAATTACATGCCACATCATCC 57.782 36.000 0.00 0.00 0.00 3.51
2694 2999 6.776603 TCATTAATTACATGCCACATCATCCA 59.223 34.615 0.00 0.00 0.00 3.41
2695 3000 7.452189 TCATTAATTACATGCCACATCATCCAT 59.548 33.333 0.00 0.00 0.00 3.41
2696 3001 7.600231 TTAATTACATGCCACATCATCCATT 57.400 32.000 0.00 0.00 0.00 3.16
2697 3002 6.488769 AATTACATGCCACATCATCCATTT 57.511 33.333 0.00 0.00 0.00 2.32
2698 3003 5.936187 TTACATGCCACATCATCCATTTT 57.064 34.783 0.00 0.00 0.00 1.82
2699 3004 4.131649 ACATGCCACATCATCCATTTTG 57.868 40.909 0.00 0.00 0.00 2.44
2700 3005 2.676632 TGCCACATCATCCATTTTGC 57.323 45.000 0.00 0.00 0.00 3.68
2701 3006 1.207570 TGCCACATCATCCATTTTGCC 59.792 47.619 0.00 0.00 0.00 4.52
2702 3007 1.483415 GCCACATCATCCATTTTGCCT 59.517 47.619 0.00 0.00 0.00 4.75
2703 3008 2.694628 GCCACATCATCCATTTTGCCTA 59.305 45.455 0.00 0.00 0.00 3.93
2704 3009 3.243636 GCCACATCATCCATTTTGCCTAG 60.244 47.826 0.00 0.00 0.00 3.02
2705 3010 4.209538 CCACATCATCCATTTTGCCTAGA 58.790 43.478 0.00 0.00 0.00 2.43
2706 3011 4.831155 CCACATCATCCATTTTGCCTAGAT 59.169 41.667 0.00 0.00 0.00 1.98
2707 3012 6.005823 CCACATCATCCATTTTGCCTAGATA 58.994 40.000 0.00 0.00 0.00 1.98
2708 3013 6.491062 CCACATCATCCATTTTGCCTAGATAA 59.509 38.462 0.00 0.00 0.00 1.75
2709 3014 7.309012 CCACATCATCCATTTTGCCTAGATAAG 60.309 40.741 0.00 0.00 0.00 1.73
2710 3015 7.230108 CACATCATCCATTTTGCCTAGATAAGT 59.770 37.037 0.00 0.00 0.00 2.24
2711 3016 7.230108 ACATCATCCATTTTGCCTAGATAAGTG 59.770 37.037 0.00 0.00 0.00 3.16
2712 3017 6.662755 TCATCCATTTTGCCTAGATAAGTGT 58.337 36.000 0.00 0.00 0.00 3.55
2713 3018 6.543465 TCATCCATTTTGCCTAGATAAGTGTG 59.457 38.462 0.00 0.00 0.00 3.82
2714 3019 6.061022 TCCATTTTGCCTAGATAAGTGTGA 57.939 37.500 0.00 0.00 0.00 3.58
2715 3020 6.662755 TCCATTTTGCCTAGATAAGTGTGAT 58.337 36.000 0.00 0.00 0.00 3.06
2716 3021 6.543465 TCCATTTTGCCTAGATAAGTGTGATG 59.457 38.462 0.00 0.00 0.00 3.07
2717 3022 6.319658 CCATTTTGCCTAGATAAGTGTGATGT 59.680 38.462 0.00 0.00 0.00 3.06
2718 3023 7.148018 CCATTTTGCCTAGATAAGTGTGATGTT 60.148 37.037 0.00 0.00 0.00 2.71
2719 3024 8.892723 CATTTTGCCTAGATAAGTGTGATGTTA 58.107 33.333 0.00 0.00 0.00 2.41
2720 3025 7.843490 TTTGCCTAGATAAGTGTGATGTTAC 57.157 36.000 0.00 0.00 0.00 2.50
2721 3026 5.914033 TGCCTAGATAAGTGTGATGTTACC 58.086 41.667 0.00 0.00 0.00 2.85
2722 3027 5.423931 TGCCTAGATAAGTGTGATGTTACCA 59.576 40.000 0.00 0.00 0.00 3.25
2723 3028 5.753921 GCCTAGATAAGTGTGATGTTACCAC 59.246 44.000 0.00 0.00 35.23 4.16
2724 3029 6.281405 CCTAGATAAGTGTGATGTTACCACC 58.719 44.000 0.00 0.00 33.80 4.61
2725 3030 6.098409 CCTAGATAAGTGTGATGTTACCACCT 59.902 42.308 0.00 0.00 33.80 4.00
2726 3031 7.287005 CCTAGATAAGTGTGATGTTACCACCTA 59.713 40.741 0.00 0.00 33.80 3.08
2727 3032 7.676683 AGATAAGTGTGATGTTACCACCTAT 57.323 36.000 0.00 0.00 33.80 2.57
2728 3033 7.500992 AGATAAGTGTGATGTTACCACCTATG 58.499 38.462 0.00 0.00 33.80 2.23
2729 3034 5.499004 AAGTGTGATGTTACCACCTATGT 57.501 39.130 0.00 0.00 33.80 2.29
2730 3035 5.499004 AGTGTGATGTTACCACCTATGTT 57.501 39.130 0.00 0.00 33.80 2.71
2731 3036 6.614694 AGTGTGATGTTACCACCTATGTTA 57.385 37.500 0.00 0.00 33.80 2.41
2732 3037 6.403878 AGTGTGATGTTACCACCTATGTTAC 58.596 40.000 0.00 0.00 33.80 2.50
2733 3038 6.212791 AGTGTGATGTTACCACCTATGTTACT 59.787 38.462 0.00 0.00 33.80 2.24
2734 3039 6.534079 GTGTGATGTTACCACCTATGTTACTC 59.466 42.308 0.00 0.00 33.80 2.59
2735 3040 6.047231 GTGATGTTACCACCTATGTTACTCC 58.953 44.000 0.00 0.00 0.00 3.85
2736 3041 5.129815 TGATGTTACCACCTATGTTACTCCC 59.870 44.000 0.00 0.00 0.00 4.30
2737 3042 4.427637 TGTTACCACCTATGTTACTCCCA 58.572 43.478 0.00 0.00 0.00 4.37
2738 3043 5.034200 TGTTACCACCTATGTTACTCCCAT 58.966 41.667 0.00 0.00 0.00 4.00
2739 3044 5.489637 TGTTACCACCTATGTTACTCCCATT 59.510 40.000 0.00 0.00 0.00 3.16
2740 3045 6.673097 TGTTACCACCTATGTTACTCCCATTA 59.327 38.462 0.00 0.00 0.00 1.90
2741 3046 7.348801 TGTTACCACCTATGTTACTCCCATTAT 59.651 37.037 0.00 0.00 0.00 1.28
2742 3047 6.187727 ACCACCTATGTTACTCCCATTATG 57.812 41.667 0.00 0.00 0.00 1.90
2743 3048 5.073144 ACCACCTATGTTACTCCCATTATGG 59.927 44.000 3.85 3.85 37.25 2.74
2787 3092 4.770795 AGATCAATTACTGTACCAGCACC 58.229 43.478 0.00 0.00 34.37 5.01
2789 3094 5.661312 AGATCAATTACTGTACCAGCACCTA 59.339 40.000 0.00 0.00 34.37 3.08
2799 3104 3.196939 ACCAGCACCTAAAACGTGTAA 57.803 42.857 0.00 0.00 33.61 2.41
2803 3108 5.151389 CCAGCACCTAAAACGTGTAATTTC 58.849 41.667 0.00 0.00 33.61 2.17
2804 3109 5.048991 CCAGCACCTAAAACGTGTAATTTCT 60.049 40.000 0.00 0.00 33.61 2.52
2809 3114 7.593644 GCACCTAAAACGTGTAATTTCTGAAAT 59.406 33.333 9.76 9.76 33.61 2.17
2885 4468 3.703001 ACCTTCGAATGTGATCCAAGT 57.297 42.857 5.21 0.00 0.00 3.16
2895 4479 3.674997 TGTGATCCAAGTTTACAGAGCC 58.325 45.455 0.00 0.00 0.00 4.70
2909 4493 3.737850 ACAGAGCCTTCTTCTTTCTGTG 58.262 45.455 4.79 0.00 44.80 3.66
2911 4495 1.809547 GAGCCTTCTTCTTTCTGTGCC 59.190 52.381 0.00 0.00 0.00 5.01
2913 4497 1.539157 CCTTCTTCTTTCTGTGCCCC 58.461 55.000 0.00 0.00 0.00 5.80
2917 4501 0.535102 CTTCTTTCTGTGCCCCGTGT 60.535 55.000 0.00 0.00 0.00 4.49
2920 4504 0.535102 CTTTCTGTGCCCCGTGTCTT 60.535 55.000 0.00 0.00 0.00 3.01
2921 4505 0.106918 TTTCTGTGCCCCGTGTCTTT 60.107 50.000 0.00 0.00 0.00 2.52
2923 4507 1.525995 CTGTGCCCCGTGTCTTTGT 60.526 57.895 0.00 0.00 0.00 2.83
2926 4510 1.098712 GTGCCCCGTGTCTTTGTCAA 61.099 55.000 0.00 0.00 0.00 3.18
2927 4511 0.179004 TGCCCCGTGTCTTTGTCAAT 60.179 50.000 0.00 0.00 0.00 2.57
2928 4512 0.240945 GCCCCGTGTCTTTGTCAATG 59.759 55.000 0.00 0.00 0.00 2.82
2929 4513 1.604604 CCCCGTGTCTTTGTCAATGT 58.395 50.000 0.00 0.00 0.00 2.71
2930 4514 1.535462 CCCCGTGTCTTTGTCAATGTC 59.465 52.381 0.00 0.00 0.00 3.06
2932 4516 2.616376 CCCGTGTCTTTGTCAATGTCAA 59.384 45.455 1.07 0.00 0.00 3.18
2933 4517 3.303990 CCCGTGTCTTTGTCAATGTCAAG 60.304 47.826 1.07 3.38 0.00 3.02
2934 4518 3.312421 CCGTGTCTTTGTCAATGTCAAGT 59.688 43.478 9.32 0.00 0.00 3.16
2935 4519 4.518217 CGTGTCTTTGTCAATGTCAAGTC 58.482 43.478 1.07 0.00 0.00 3.01
2937 4521 5.220662 CGTGTCTTTGTCAATGTCAAGTCTT 60.221 40.000 1.07 0.00 0.00 3.01
2938 4522 6.195165 GTGTCTTTGTCAATGTCAAGTCTTC 58.805 40.000 1.07 0.00 0.00 2.87
2978 5684 6.529829 CCCATCAAAATACACCATTTTACACG 59.470 38.462 0.00 0.00 43.51 4.49
3018 5725 9.084164 TGTAATTACTTTCGAAGATAGAGTTGC 57.916 33.333 16.33 1.04 37.82 4.17
3019 5726 9.084164 GTAATTACTTTCGAAGATAGAGTTGCA 57.916 33.333 8.41 0.00 37.82 4.08
3020 5727 8.547967 AATTACTTTCGAAGATAGAGTTGCAA 57.452 30.769 4.87 0.00 37.82 4.08
3021 5728 7.956420 TTACTTTCGAAGATAGAGTTGCAAA 57.044 32.000 0.00 0.00 37.82 3.68
3022 5729 8.547967 TTACTTTCGAAGATAGAGTTGCAAAT 57.452 30.769 0.00 0.00 37.82 2.32
3023 5730 9.647797 TTACTTTCGAAGATAGAGTTGCAAATA 57.352 29.630 0.00 0.00 37.82 1.40
3024 5731 8.723942 ACTTTCGAAGATAGAGTTGCAAATAT 57.276 30.769 0.00 0.00 37.82 1.28
3025 5732 8.821894 ACTTTCGAAGATAGAGTTGCAAATATC 58.178 33.333 0.00 9.80 37.82 1.63
3026 5733 6.993175 TCGAAGATAGAGTTGCAAATATCG 57.007 37.500 0.00 5.56 31.37 2.92
3027 5734 6.735130 TCGAAGATAGAGTTGCAAATATCGA 58.265 36.000 0.00 7.77 31.37 3.59
3028 5735 7.371159 TCGAAGATAGAGTTGCAAATATCGAT 58.629 34.615 0.00 2.16 31.37 3.59
3029 5736 7.327032 TCGAAGATAGAGTTGCAAATATCGATG 59.673 37.037 8.54 5.47 31.37 3.84
3030 5737 6.718454 AGATAGAGTTGCAAATATCGATGC 57.282 37.500 8.54 4.80 42.86 3.91
3031 5738 6.462500 AGATAGAGTTGCAAATATCGATGCT 58.538 36.000 8.54 0.00 42.97 3.79
3032 5739 4.808077 AGAGTTGCAAATATCGATGCTG 57.192 40.909 8.54 3.57 42.97 4.41
3033 5740 4.445453 AGAGTTGCAAATATCGATGCTGA 58.555 39.130 8.54 0.00 42.97 4.26
3034 5741 4.272018 AGAGTTGCAAATATCGATGCTGAC 59.728 41.667 8.54 7.77 42.97 3.51
3035 5742 3.940852 AGTTGCAAATATCGATGCTGACA 59.059 39.130 8.54 0.00 42.97 3.58
3036 5743 4.577693 AGTTGCAAATATCGATGCTGACAT 59.422 37.500 8.54 0.00 42.97 3.06
3037 5744 4.477302 TGCAAATATCGATGCTGACATG 57.523 40.909 8.54 0.00 42.97 3.21
3038 5745 3.878699 TGCAAATATCGATGCTGACATGT 59.121 39.130 8.54 0.00 42.97 3.21
3039 5746 4.336153 TGCAAATATCGATGCTGACATGTT 59.664 37.500 8.54 0.00 42.97 2.71
3040 5747 5.526846 TGCAAATATCGATGCTGACATGTTA 59.473 36.000 8.54 0.00 42.97 2.41
3041 5748 6.075918 GCAAATATCGATGCTGACATGTTAG 58.924 40.000 13.09 13.09 39.46 2.34
3042 5749 5.852738 AATATCGATGCTGACATGTTAGC 57.147 39.130 30.08 30.08 41.88 3.09
3043 5750 1.939974 TCGATGCTGACATGTTAGCC 58.060 50.000 32.40 20.32 40.96 3.93
3044 5751 1.206849 TCGATGCTGACATGTTAGCCA 59.793 47.619 32.40 22.75 40.96 4.75
3045 5752 2.009051 CGATGCTGACATGTTAGCCAA 58.991 47.619 32.40 19.67 40.96 4.52
3046 5753 2.031314 CGATGCTGACATGTTAGCCAAG 59.969 50.000 32.40 21.48 40.96 3.61
3047 5754 2.566833 TGCTGACATGTTAGCCAAGT 57.433 45.000 32.40 0.00 40.96 3.16
3048 5755 2.862541 TGCTGACATGTTAGCCAAGTT 58.137 42.857 32.40 0.00 40.96 2.66
3049 5756 3.221771 TGCTGACATGTTAGCCAAGTTT 58.778 40.909 32.40 0.00 40.96 2.66
3050 5757 3.636300 TGCTGACATGTTAGCCAAGTTTT 59.364 39.130 32.40 0.00 40.96 2.43
3051 5758 4.229876 GCTGACATGTTAGCCAAGTTTTC 58.770 43.478 27.51 1.40 36.35 2.29
3052 5759 4.261572 GCTGACATGTTAGCCAAGTTTTCA 60.262 41.667 27.51 3.37 36.35 2.69
3053 5760 5.181690 TGACATGTTAGCCAAGTTTTCAC 57.818 39.130 0.00 0.00 0.00 3.18
3054 5761 4.642437 TGACATGTTAGCCAAGTTTTCACA 59.358 37.500 0.00 0.00 0.00 3.58
3055 5762 5.301551 TGACATGTTAGCCAAGTTTTCACAT 59.698 36.000 0.00 0.00 0.00 3.21
3056 5763 6.160576 ACATGTTAGCCAAGTTTTCACATT 57.839 33.333 0.00 0.00 0.00 2.71
3057 5764 6.215845 ACATGTTAGCCAAGTTTTCACATTC 58.784 36.000 0.00 0.00 0.00 2.67
3058 5765 5.195001 TGTTAGCCAAGTTTTCACATTCC 57.805 39.130 0.00 0.00 0.00 3.01
3059 5766 4.892934 TGTTAGCCAAGTTTTCACATTCCT 59.107 37.500 0.00 0.00 0.00 3.36
3060 5767 5.362430 TGTTAGCCAAGTTTTCACATTCCTT 59.638 36.000 0.00 0.00 0.00 3.36
3061 5768 6.547880 TGTTAGCCAAGTTTTCACATTCCTTA 59.452 34.615 0.00 0.00 0.00 2.69
3062 5769 5.712152 AGCCAAGTTTTCACATTCCTTAG 57.288 39.130 0.00 0.00 0.00 2.18
3063 5770 5.385198 AGCCAAGTTTTCACATTCCTTAGA 58.615 37.500 0.00 0.00 0.00 2.10
3064 5771 6.012745 AGCCAAGTTTTCACATTCCTTAGAT 58.987 36.000 0.00 0.00 0.00 1.98
3065 5772 6.151817 AGCCAAGTTTTCACATTCCTTAGATC 59.848 38.462 0.00 0.00 0.00 2.75
3066 5773 6.071952 GCCAAGTTTTCACATTCCTTAGATCA 60.072 38.462 0.00 0.00 0.00 2.92
3067 5774 7.523709 GCCAAGTTTTCACATTCCTTAGATCAA 60.524 37.037 0.00 0.00 0.00 2.57
3068 5775 8.025445 CCAAGTTTTCACATTCCTTAGATCAAG 58.975 37.037 0.00 0.00 0.00 3.02
3081 5788 6.099579 CTTAGATCAAGGACGACATGTTTG 57.900 41.667 0.00 0.00 0.00 2.93
3082 5789 3.338249 AGATCAAGGACGACATGTTTGG 58.662 45.455 0.00 0.00 0.00 3.28
3083 5790 2.631160 TCAAGGACGACATGTTTGGT 57.369 45.000 0.00 0.00 0.00 3.67
3084 5791 2.925724 TCAAGGACGACATGTTTGGTT 58.074 42.857 0.00 0.00 0.00 3.67
3085 5792 2.616376 TCAAGGACGACATGTTTGGTTG 59.384 45.455 0.00 1.38 0.00 3.77
3086 5793 2.341846 AGGACGACATGTTTGGTTGT 57.658 45.000 0.00 0.00 35.60 3.32
3087 5794 2.218603 AGGACGACATGTTTGGTTGTC 58.781 47.619 0.00 4.69 45.09 3.18
3088 5795 2.158813 AGGACGACATGTTTGGTTGTCT 60.159 45.455 0.00 0.00 45.13 3.41
3089 5796 2.032030 GGACGACATGTTTGGTTGTCTG 60.032 50.000 0.00 0.00 45.13 3.51
3090 5797 2.869801 GACGACATGTTTGGTTGTCTGA 59.130 45.455 0.00 0.00 43.35 3.27
3091 5798 2.872245 ACGACATGTTTGGTTGTCTGAG 59.128 45.455 0.00 0.00 40.05 3.35
3092 5799 2.349817 CGACATGTTTGGTTGTCTGAGC 60.350 50.000 0.00 0.00 40.05 4.26
3093 5800 1.956477 ACATGTTTGGTTGTCTGAGCC 59.044 47.619 0.00 0.00 0.00 4.70
3094 5801 1.270550 CATGTTTGGTTGTCTGAGCCC 59.729 52.381 0.00 0.00 0.00 5.19
3095 5802 0.550914 TGTTTGGTTGTCTGAGCCCT 59.449 50.000 0.00 0.00 0.00 5.19
3096 5803 1.771854 TGTTTGGTTGTCTGAGCCCTA 59.228 47.619 0.00 0.00 0.00 3.53
3097 5804 2.375174 TGTTTGGTTGTCTGAGCCCTAT 59.625 45.455 0.00 0.00 0.00 2.57
3098 5805 2.749621 GTTTGGTTGTCTGAGCCCTATG 59.250 50.000 0.00 0.00 0.00 2.23
3099 5806 1.951209 TGGTTGTCTGAGCCCTATGA 58.049 50.000 0.00 0.00 0.00 2.15
3100 5807 2.481441 TGGTTGTCTGAGCCCTATGAT 58.519 47.619 0.00 0.00 0.00 2.45
3101 5808 2.435805 TGGTTGTCTGAGCCCTATGATC 59.564 50.000 0.00 0.00 0.00 2.92
3102 5809 2.224402 GGTTGTCTGAGCCCTATGATCC 60.224 54.545 0.00 0.00 0.00 3.36
3103 5810 2.435805 GTTGTCTGAGCCCTATGATCCA 59.564 50.000 0.00 0.00 0.00 3.41
3104 5811 2.981921 TGTCTGAGCCCTATGATCCAT 58.018 47.619 0.00 0.00 0.00 3.41
3105 5812 3.321039 TGTCTGAGCCCTATGATCCATT 58.679 45.455 0.00 0.00 0.00 3.16
3106 5813 3.718434 TGTCTGAGCCCTATGATCCATTT 59.282 43.478 0.00 0.00 0.00 2.32
3107 5814 4.166725 TGTCTGAGCCCTATGATCCATTTT 59.833 41.667 0.00 0.00 0.00 1.82
3108 5815 4.518211 GTCTGAGCCCTATGATCCATTTTG 59.482 45.833 0.00 0.00 0.00 2.44
3109 5816 4.166725 TCTGAGCCCTATGATCCATTTTGT 59.833 41.667 0.00 0.00 0.00 2.83
3110 5817 5.369404 TCTGAGCCCTATGATCCATTTTGTA 59.631 40.000 0.00 0.00 0.00 2.41
3111 5818 6.044754 TCTGAGCCCTATGATCCATTTTGTAT 59.955 38.462 0.00 0.00 0.00 2.29
3112 5819 6.240894 TGAGCCCTATGATCCATTTTGTATC 58.759 40.000 0.00 0.00 0.00 2.24
3113 5820 5.574188 AGCCCTATGATCCATTTTGTATCC 58.426 41.667 0.00 0.00 0.00 2.59
3114 5821 4.706962 GCCCTATGATCCATTTTGTATCCC 59.293 45.833 0.00 0.00 0.00 3.85
3115 5822 4.943705 CCCTATGATCCATTTTGTATCCCG 59.056 45.833 0.00 0.00 0.00 5.14
3116 5823 4.396166 CCTATGATCCATTTTGTATCCCGC 59.604 45.833 0.00 0.00 0.00 6.13
3117 5824 3.289407 TGATCCATTTTGTATCCCGCA 57.711 42.857 0.00 0.00 0.00 5.69
3118 5825 3.625853 TGATCCATTTTGTATCCCGCAA 58.374 40.909 0.00 0.00 0.00 4.85
3119 5826 4.214310 TGATCCATTTTGTATCCCGCAAT 58.786 39.130 0.00 0.00 0.00 3.56
3120 5827 4.648762 TGATCCATTTTGTATCCCGCAATT 59.351 37.500 0.00 0.00 0.00 2.32
3121 5828 5.128499 TGATCCATTTTGTATCCCGCAATTT 59.872 36.000 0.00 0.00 0.00 1.82
3122 5829 4.753233 TCCATTTTGTATCCCGCAATTTG 58.247 39.130 0.00 0.00 0.00 2.32
3123 5830 4.221703 TCCATTTTGTATCCCGCAATTTGT 59.778 37.500 0.00 0.00 0.00 2.83
3124 5831 4.329528 CCATTTTGTATCCCGCAATTTGTG 59.670 41.667 2.89 2.89 0.00 3.33
3125 5832 4.855715 TTTTGTATCCCGCAATTTGTGA 57.144 36.364 11.46 0.32 0.00 3.58
3126 5833 4.855715 TTTGTATCCCGCAATTTGTGAA 57.144 36.364 11.46 0.04 0.00 3.18
3127 5834 4.855715 TTGTATCCCGCAATTTGTGAAA 57.144 36.364 11.46 0.00 0.00 2.69
3128 5835 5.398603 TTGTATCCCGCAATTTGTGAAAT 57.601 34.783 11.46 6.84 0.00 2.17
3129 5836 5.398603 TGTATCCCGCAATTTGTGAAATT 57.601 34.783 11.46 0.00 41.57 1.82
3130 5837 5.406649 TGTATCCCGCAATTTGTGAAATTC 58.593 37.500 11.46 3.67 38.97 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 9.071221 CGCACTTTTTGTAATATGCAAAGAATA 57.929 29.630 0.00 0.00 37.18 1.75
53 54 7.812191 TCGCACTTTTTGTAATATGCAAAGAAT 59.188 29.630 0.00 0.00 37.18 2.40
54 55 7.142021 TCGCACTTTTTGTAATATGCAAAGAA 58.858 30.769 0.00 4.47 37.18 2.52
55 56 6.673106 TCGCACTTTTTGTAATATGCAAAGA 58.327 32.000 0.00 2.55 37.18 2.52
56 57 6.926280 TCGCACTTTTTGTAATATGCAAAG 57.074 33.333 0.00 0.00 37.18 2.77
57 58 7.881643 AATCGCACTTTTTGTAATATGCAAA 57.118 28.000 0.00 2.65 34.47 3.68
58 59 7.881643 AAATCGCACTTTTTGTAATATGCAA 57.118 28.000 0.00 0.00 33.27 4.08
59 60 9.018716 CATAAATCGCACTTTTTGTAATATGCA 57.981 29.630 0.00 0.00 33.27 3.96
60 61 7.998212 GCATAAATCGCACTTTTTGTAATATGC 59.002 33.333 0.00 0.00 0.00 3.14
61 62 8.479280 GGCATAAATCGCACTTTTTGTAATATG 58.521 33.333 0.00 0.00 0.00 1.78
62 63 8.194104 TGGCATAAATCGCACTTTTTGTAATAT 58.806 29.630 0.00 0.00 0.00 1.28
63 64 7.539436 TGGCATAAATCGCACTTTTTGTAATA 58.461 30.769 0.00 0.00 0.00 0.98
64 65 6.393990 TGGCATAAATCGCACTTTTTGTAAT 58.606 32.000 0.00 0.00 0.00 1.89
65 66 5.773575 TGGCATAAATCGCACTTTTTGTAA 58.226 33.333 0.00 0.00 0.00 2.41
66 67 5.378292 TGGCATAAATCGCACTTTTTGTA 57.622 34.783 0.00 0.00 0.00 2.41
67 68 4.250116 TGGCATAAATCGCACTTTTTGT 57.750 36.364 0.00 0.00 0.00 2.83
68 69 5.783100 ATTGGCATAAATCGCACTTTTTG 57.217 34.783 0.00 0.00 0.00 2.44
69 70 5.931146 TGAATTGGCATAAATCGCACTTTTT 59.069 32.000 0.00 0.00 0.00 1.94
70 71 5.477510 TGAATTGGCATAAATCGCACTTTT 58.522 33.333 0.00 0.00 0.00 2.27
71 72 5.070770 TGAATTGGCATAAATCGCACTTT 57.929 34.783 0.00 0.00 0.00 2.66
72 73 4.717233 TGAATTGGCATAAATCGCACTT 57.283 36.364 0.00 0.00 0.00 3.16
73 74 4.924305 ATGAATTGGCATAAATCGCACT 57.076 36.364 0.00 0.00 0.00 4.40
74 75 5.284079 AGAATGAATTGGCATAAATCGCAC 58.716 37.500 0.00 0.00 0.00 5.34
75 76 5.518848 AGAATGAATTGGCATAAATCGCA 57.481 34.783 0.00 0.00 0.00 5.10
76 77 6.833342 AAAGAATGAATTGGCATAAATCGC 57.167 33.333 0.00 0.00 0.00 4.58
96 97 9.618410 CGTACAAAAGCAGTTTTTCAAATAAAG 57.382 29.630 0.00 0.00 36.87 1.85
97 98 9.355215 TCGTACAAAAGCAGTTTTTCAAATAAA 57.645 25.926 0.00 0.00 36.87 1.40
98 99 8.912787 TCGTACAAAAGCAGTTTTTCAAATAA 57.087 26.923 0.00 0.00 36.87 1.40
99 100 8.912787 TTCGTACAAAAGCAGTTTTTCAAATA 57.087 26.923 0.00 0.00 36.87 1.40
100 101 7.820044 TTCGTACAAAAGCAGTTTTTCAAAT 57.180 28.000 0.00 0.00 36.87 2.32
101 102 7.639162 TTTCGTACAAAAGCAGTTTTTCAAA 57.361 28.000 0.00 0.00 36.87 2.69
102 103 7.639162 TTTTCGTACAAAAGCAGTTTTTCAA 57.361 28.000 0.00 0.00 36.87 2.69
103 104 7.820044 ATTTTCGTACAAAAGCAGTTTTTCA 57.180 28.000 0.00 0.00 36.87 2.69
104 105 7.844169 GGAATTTTCGTACAAAAGCAGTTTTTC 59.156 33.333 0.00 0.00 36.87 2.29
105 106 7.332182 TGGAATTTTCGTACAAAAGCAGTTTTT 59.668 29.630 0.00 0.00 39.55 1.94
106 107 6.814146 TGGAATTTTCGTACAAAAGCAGTTTT 59.186 30.769 0.00 0.00 36.22 2.43
107 108 6.254804 GTGGAATTTTCGTACAAAAGCAGTTT 59.745 34.615 0.00 0.00 0.00 2.66
108 109 5.746721 GTGGAATTTTCGTACAAAAGCAGTT 59.253 36.000 0.00 0.00 0.00 3.16
109 110 5.163602 TGTGGAATTTTCGTACAAAAGCAGT 60.164 36.000 0.00 0.00 0.00 4.40
110 111 5.277825 TGTGGAATTTTCGTACAAAAGCAG 58.722 37.500 0.00 0.00 0.00 4.24
111 112 5.163602 ACTGTGGAATTTTCGTACAAAAGCA 60.164 36.000 0.00 0.00 0.00 3.91
112 113 5.278604 ACTGTGGAATTTTCGTACAAAAGC 58.721 37.500 0.00 0.00 0.00 3.51
113 114 7.636326 AGTACTGTGGAATTTTCGTACAAAAG 58.364 34.615 0.00 0.00 32.01 2.27
114 115 7.556733 AGTACTGTGGAATTTTCGTACAAAA 57.443 32.000 0.00 0.00 32.01 2.44
115 116 8.143193 TCTAGTACTGTGGAATTTTCGTACAAA 58.857 33.333 5.39 0.00 32.01 2.83
116 117 7.596248 GTCTAGTACTGTGGAATTTTCGTACAA 59.404 37.037 5.39 0.00 32.01 2.41
117 118 7.040201 AGTCTAGTACTGTGGAATTTTCGTACA 60.040 37.037 5.39 4.79 36.93 2.90
118 119 7.311408 AGTCTAGTACTGTGGAATTTTCGTAC 58.689 38.462 5.39 0.00 36.93 3.67
119 120 7.458409 AGTCTAGTACTGTGGAATTTTCGTA 57.542 36.000 5.39 0.00 36.93 3.43
120 121 6.342338 AGTCTAGTACTGTGGAATTTTCGT 57.658 37.500 5.39 0.00 36.93 3.85
121 122 8.928270 ATAAGTCTAGTACTGTGGAATTTTCG 57.072 34.615 5.39 0.00 38.88 3.46
184 185 5.410746 ACAAACAATGACAAATTGCACACAA 59.589 32.000 0.00 0.00 40.87 3.33
185 186 4.934001 ACAAACAATGACAAATTGCACACA 59.066 33.333 0.00 0.00 32.55 3.72
186 187 5.467902 ACAAACAATGACAAATTGCACAC 57.532 34.783 0.00 0.00 32.55 3.82
187 188 6.492007 AAACAAACAATGACAAATTGCACA 57.508 29.167 0.00 0.00 32.55 4.57
188 189 8.386606 TCTAAAACAAACAATGACAAATTGCAC 58.613 29.630 0.00 0.00 32.55 4.57
189 190 8.484641 TCTAAAACAAACAATGACAAATTGCA 57.515 26.923 0.00 0.00 32.55 4.08
219 220 0.955905 GCAGAACGTGGGGCTAAAAA 59.044 50.000 0.00 0.00 0.00 1.94
220 221 1.231958 CGCAGAACGTGGGGCTAAAA 61.232 55.000 0.00 0.00 35.43 1.52
221 222 1.669760 CGCAGAACGTGGGGCTAAA 60.670 57.895 0.00 0.00 35.43 1.85
222 223 1.895020 ATCGCAGAACGTGGGGCTAA 61.895 55.000 0.00 0.00 43.58 3.09
223 224 1.895020 AATCGCAGAACGTGGGGCTA 61.895 55.000 0.00 0.00 43.58 3.93
224 225 3.254024 AATCGCAGAACGTGGGGCT 62.254 57.895 0.00 0.00 43.58 5.19
225 226 2.746277 AATCGCAGAACGTGGGGC 60.746 61.111 0.00 0.00 43.58 5.80
226 227 3.039202 GCAATCGCAGAACGTGGGG 62.039 63.158 0.00 0.00 43.58 4.96
227 228 2.324330 TGCAATCGCAGAACGTGGG 61.324 57.895 0.00 0.00 45.36 4.61
228 229 3.252964 TGCAATCGCAGAACGTGG 58.747 55.556 0.00 0.00 45.36 4.94
233 234 8.536815 ACTAATGAAGTACATGCAATCGCAGAA 61.537 37.037 0.00 0.00 44.60 3.02
234 235 7.125763 ACTAATGAAGTACATGCAATCGCAGA 61.126 38.462 0.00 0.00 44.60 4.26
235 236 5.007039 ACTAATGAAGTACATGCAATCGCAG 59.993 40.000 0.00 0.00 44.60 5.18
236 237 4.875536 ACTAATGAAGTACATGCAATCGCA 59.124 37.500 0.00 0.00 45.19 5.10
237 238 5.200454 CACTAATGAAGTACATGCAATCGC 58.800 41.667 0.00 0.00 39.39 4.58
238 239 5.523552 TCCACTAATGAAGTACATGCAATCG 59.476 40.000 0.00 0.00 39.39 3.34
239 240 6.540189 ACTCCACTAATGAAGTACATGCAATC 59.460 38.462 0.00 0.00 39.39 2.67
240 241 6.418101 ACTCCACTAATGAAGTACATGCAAT 58.582 36.000 0.00 0.00 39.39 3.56
241 242 5.804639 ACTCCACTAATGAAGTACATGCAA 58.195 37.500 0.00 0.00 39.39 4.08
242 243 5.420725 ACTCCACTAATGAAGTACATGCA 57.579 39.130 0.00 0.00 39.39 3.96
243 244 6.018669 GCTAACTCCACTAATGAAGTACATGC 60.019 42.308 0.00 0.00 39.39 4.06
244 245 7.268586 AGCTAACTCCACTAATGAAGTACATG 58.731 38.462 0.00 0.00 39.39 3.21
245 246 7.425224 AGCTAACTCCACTAATGAAGTACAT 57.575 36.000 0.00 0.00 41.45 2.29
246 247 6.852420 AGCTAACTCCACTAATGAAGTACA 57.148 37.500 0.00 0.00 35.76 2.90
247 248 6.472808 CGAAGCTAACTCCACTAATGAAGTAC 59.527 42.308 0.00 0.00 35.76 2.73
248 249 6.405508 CCGAAGCTAACTCCACTAATGAAGTA 60.406 42.308 0.00 0.00 35.76 2.24
249 250 5.411781 CGAAGCTAACTCCACTAATGAAGT 58.588 41.667 0.00 0.00 39.81 3.01
250 251 4.806247 CCGAAGCTAACTCCACTAATGAAG 59.194 45.833 0.00 0.00 0.00 3.02
251 252 4.464951 TCCGAAGCTAACTCCACTAATGAA 59.535 41.667 0.00 0.00 0.00 2.57
252 253 4.021229 TCCGAAGCTAACTCCACTAATGA 58.979 43.478 0.00 0.00 0.00 2.57
253 254 4.363999 CTCCGAAGCTAACTCCACTAATG 58.636 47.826 0.00 0.00 0.00 1.90
254 255 3.385111 CCTCCGAAGCTAACTCCACTAAT 59.615 47.826 0.00 0.00 0.00 1.73
255 256 2.758979 CCTCCGAAGCTAACTCCACTAA 59.241 50.000 0.00 0.00 0.00 2.24
256 257 2.291411 ACCTCCGAAGCTAACTCCACTA 60.291 50.000 0.00 0.00 0.00 2.74
257 258 1.187087 CCTCCGAAGCTAACTCCACT 58.813 55.000 0.00 0.00 0.00 4.00
258 259 0.896226 ACCTCCGAAGCTAACTCCAC 59.104 55.000 0.00 0.00 0.00 4.02
259 260 1.275291 CAACCTCCGAAGCTAACTCCA 59.725 52.381 0.00 0.00 0.00 3.86
260 261 1.275573 ACAACCTCCGAAGCTAACTCC 59.724 52.381 0.00 0.00 0.00 3.85
334 335 7.918033 ACTGAACTCATGTCTATTTATCAGTCG 59.082 37.037 0.00 0.00 40.51 4.18
367 368 3.326588 ACCATGCAAGGTAGAGTAACACA 59.673 43.478 12.93 0.00 40.98 3.72
429 435 3.674997 TGTTCAGGTGTTAGGAATGAGC 58.325 45.455 0.00 0.00 0.00 4.26
454 460 5.130145 ACAAAACATGGGATCTGACCAAAAA 59.870 36.000 0.00 0.00 42.17 1.94
455 461 4.653341 ACAAAACATGGGATCTGACCAAAA 59.347 37.500 0.00 0.00 42.17 2.44
456 462 4.222336 ACAAAACATGGGATCTGACCAAA 58.778 39.130 0.00 0.00 42.17 3.28
467 473 3.533606 TGTGGACAAACAAAACATGGG 57.466 42.857 0.00 0.00 0.00 4.00
472 478 5.974751 ACGATAACATGTGGACAAACAAAAC 59.025 36.000 0.00 0.00 32.81 2.43
475 481 5.066634 ACAACGATAACATGTGGACAAACAA 59.933 36.000 0.00 0.00 32.81 2.83
476 482 4.576873 ACAACGATAACATGTGGACAAACA 59.423 37.500 0.00 0.00 0.00 2.83
477 483 5.103290 ACAACGATAACATGTGGACAAAC 57.897 39.130 0.00 0.00 0.00 2.93
478 484 6.621812 GCATACAACGATAACATGTGGACAAA 60.622 38.462 0.00 0.00 0.00 2.83
479 485 5.163804 GCATACAACGATAACATGTGGACAA 60.164 40.000 0.00 0.00 0.00 3.18
480 486 4.331443 GCATACAACGATAACATGTGGACA 59.669 41.667 0.00 0.00 0.00 4.02
481 487 4.331443 TGCATACAACGATAACATGTGGAC 59.669 41.667 0.00 0.00 0.00 4.02
482 488 4.508662 TGCATACAACGATAACATGTGGA 58.491 39.130 0.00 0.00 0.00 4.02
483 489 4.873768 TGCATACAACGATAACATGTGG 57.126 40.909 0.00 0.00 0.00 4.17
484 490 7.739022 ATTTTGCATACAACGATAACATGTG 57.261 32.000 0.00 0.00 34.87 3.21
485 491 9.284594 GTAATTTTGCATACAACGATAACATGT 57.715 29.630 0.00 0.00 34.87 3.21
486 492 8.742188 GGTAATTTTGCATACAACGATAACATG 58.258 33.333 0.00 0.00 34.87 3.21
487 493 7.642194 CGGTAATTTTGCATACAACGATAACAT 59.358 33.333 0.00 0.00 34.87 2.71
488 494 6.962116 CGGTAATTTTGCATACAACGATAACA 59.038 34.615 0.00 0.00 34.87 2.41
489 495 6.075780 GCGGTAATTTTGCATACAACGATAAC 60.076 38.462 0.00 0.00 34.87 1.89
490 496 5.966503 GCGGTAATTTTGCATACAACGATAA 59.033 36.000 0.00 0.00 34.87 1.75
491 497 5.064834 TGCGGTAATTTTGCATACAACGATA 59.935 36.000 0.00 0.00 34.87 2.92
492 498 4.142578 TGCGGTAATTTTGCATACAACGAT 60.143 37.500 0.00 0.00 34.87 3.73
512 518 2.312348 GTTTAATTTGACCGGTGTGCG 58.688 47.619 14.63 0.00 0.00 5.34
527 533 3.149005 AGGCAATTCACCCTCGTTTAA 57.851 42.857 0.00 0.00 0.00 1.52
528 534 2.817258 CAAGGCAATTCACCCTCGTTTA 59.183 45.455 0.00 0.00 0.00 2.01
529 535 1.613437 CAAGGCAATTCACCCTCGTTT 59.387 47.619 0.00 0.00 0.00 3.60
530 536 1.247567 CAAGGCAATTCACCCTCGTT 58.752 50.000 0.00 0.00 0.00 3.85
575 581 8.186178 AGAACAGAAAATATACGTGTGCTTAG 57.814 34.615 0.00 0.00 0.00 2.18
576 582 9.811995 ATAGAACAGAAAATATACGTGTGCTTA 57.188 29.630 0.00 0.00 29.48 3.09
724 730 1.797713 CGGTCTGCTACGTACATGGTG 60.798 57.143 0.00 0.00 0.00 4.17
777 867 4.040217 TCCATGAACCTTTCCAACCAAATG 59.960 41.667 0.00 0.00 0.00 2.32
922 1020 5.507974 CATCGCATGCATATTTATAGCCAG 58.492 41.667 19.57 0.00 0.00 4.85
1235 1450 1.745489 AATCCCGGCTGTTCTTCGC 60.745 57.895 0.00 0.00 0.00 4.70
1258 1489 2.256445 AACACGCACGGCAAATAATC 57.744 45.000 0.00 0.00 0.00 1.75
1488 1730 4.641989 GCATCCAATGAACCATGTAAGTCT 59.358 41.667 0.00 0.00 0.00 3.24
1489 1731 4.641989 AGCATCCAATGAACCATGTAAGTC 59.358 41.667 0.00 0.00 0.00 3.01
1499 1746 0.659957 GAGCCGAGCATCCAATGAAC 59.340 55.000 0.00 0.00 0.00 3.18
1502 1749 0.465097 AAGGAGCCGAGCATCCAATG 60.465 55.000 12.89 0.00 38.12 2.82
1530 1790 9.117145 GCAAACAAACGATTATATATGATGGTG 57.883 33.333 6.01 0.00 0.00 4.17
1532 1792 9.897744 AAGCAAACAAACGATTATATATGATGG 57.102 29.630 0.00 0.00 0.00 3.51
1539 1799 9.469807 TGACAAAAAGCAAACAAACGATTATAT 57.530 25.926 0.00 0.00 0.00 0.86
1540 1800 8.858003 TGACAAAAAGCAAACAAACGATTATA 57.142 26.923 0.00 0.00 0.00 0.98
1541 1801 7.763172 TGACAAAAAGCAAACAAACGATTAT 57.237 28.000 0.00 0.00 0.00 1.28
1545 1805 4.926238 ACATGACAAAAAGCAAACAAACGA 59.074 33.333 0.00 0.00 0.00 3.85
1565 1835 4.479993 GCCCTCCGAGCTGCACAT 62.480 66.667 1.02 0.00 0.00 3.21
1901 2192 2.981805 GTGTAGTATGCGTTGTCGAACA 59.018 45.455 0.00 0.00 39.71 3.18
2236 2535 3.077519 ATGCACCGAGTAGTCGCCC 62.078 63.158 14.65 5.29 45.41 6.13
2240 2539 4.110493 GGCATGCACCGAGTAGTC 57.890 61.111 21.36 0.00 0.00 2.59
2257 2556 0.601046 TGAGGTCTTCAAGCAGCACG 60.601 55.000 0.00 0.00 31.34 5.34
2282 2581 1.206115 GAAAACCAGGTGCGCGTTTG 61.206 55.000 8.43 4.74 30.41 2.93
2286 2585 2.764251 CTTCGAAAACCAGGTGCGCG 62.764 60.000 0.00 0.00 0.00 6.86
2294 2593 0.472471 ACCTCAGGCTTCGAAAACCA 59.528 50.000 16.82 0.00 0.00 3.67
2357 2656 2.966516 CAGGCCTAGTCCCTAGTTTAGG 59.033 54.545 3.98 0.00 45.81 2.69
2409 2712 4.215827 GGACAGTATAGTCATACTCCCACG 59.784 50.000 0.00 0.00 44.55 4.94
2436 2739 2.230508 CCTTGCATGATCAGCAACAACT 59.769 45.455 21.22 0.00 46.13 3.16
2453 2756 1.577328 GACGTGGGCATGTCACCTTG 61.577 60.000 0.00 0.00 44.56 3.61
2487 2792 9.750783 TGTTACTACTCTAAGTTACTCTCCATT 57.249 33.333 0.00 0.00 31.82 3.16
2488 2793 9.924010 ATGTTACTACTCTAAGTTACTCTCCAT 57.076 33.333 0.00 0.00 31.82 3.41
2489 2794 9.175312 CATGTTACTACTCTAAGTTACTCTCCA 57.825 37.037 0.00 0.00 31.82 3.86
2490 2795 8.130469 GCATGTTACTACTCTAAGTTACTCTCC 58.870 40.741 0.00 0.00 31.82 3.71
2491 2796 8.675504 TGCATGTTACTACTCTAAGTTACTCTC 58.324 37.037 0.00 0.00 31.82 3.20
2492 2797 8.577048 TGCATGTTACTACTCTAAGTTACTCT 57.423 34.615 0.00 0.00 31.82 3.24
2519 2824 9.571816 GGAGGTAGTAACATAGACTAGTAACAT 57.428 37.037 0.00 0.00 30.08 2.71
2520 2825 8.551440 TGGAGGTAGTAACATAGACTAGTAACA 58.449 37.037 0.00 0.00 30.08 2.41
2521 2826 8.835439 GTGGAGGTAGTAACATAGACTAGTAAC 58.165 40.741 0.00 0.00 30.08 2.50
2522 2827 8.551440 TGTGGAGGTAGTAACATAGACTAGTAA 58.449 37.037 0.00 0.00 30.08 2.24
2523 2828 8.094284 TGTGGAGGTAGTAACATAGACTAGTA 57.906 38.462 0.00 0.00 30.08 1.82
2524 2829 6.966751 TGTGGAGGTAGTAACATAGACTAGT 58.033 40.000 0.00 0.00 30.08 2.57
2525 2830 7.012515 CACTGTGGAGGTAGTAACATAGACTAG 59.987 44.444 0.00 0.00 30.08 2.57
2526 2831 6.827251 CACTGTGGAGGTAGTAACATAGACTA 59.173 42.308 0.00 0.00 0.00 2.59
2527 2832 5.652891 CACTGTGGAGGTAGTAACATAGACT 59.347 44.000 0.00 0.00 0.00 3.24
2528 2833 5.163540 CCACTGTGGAGGTAGTAACATAGAC 60.164 48.000 22.33 0.00 40.96 2.59
2529 2834 4.954202 CCACTGTGGAGGTAGTAACATAGA 59.046 45.833 22.33 0.00 40.96 1.98
2530 2835 4.099573 CCCACTGTGGAGGTAGTAACATAG 59.900 50.000 27.94 2.06 40.96 2.23
2531 2836 4.028131 CCCACTGTGGAGGTAGTAACATA 58.972 47.826 27.94 0.00 40.96 2.29
2532 2837 2.838202 CCCACTGTGGAGGTAGTAACAT 59.162 50.000 27.94 0.00 40.96 2.71
2533 2838 2.253610 CCCACTGTGGAGGTAGTAACA 58.746 52.381 27.94 0.00 40.96 2.41
2534 2839 2.254508 ACCCACTGTGGAGGTAGTAAC 58.745 52.381 27.94 0.00 40.96 2.50
2535 2840 2.708037 ACCCACTGTGGAGGTAGTAA 57.292 50.000 27.94 0.00 40.96 2.24
2536 2841 3.377253 CTACCCACTGTGGAGGTAGTA 57.623 52.381 27.94 18.08 45.39 1.82
2537 2842 2.233305 CTACCCACTGTGGAGGTAGT 57.767 55.000 27.94 17.93 45.39 2.73
2539 2844 3.181419 TGTTACTACCCACTGTGGAGGTA 60.181 47.826 27.94 20.93 40.96 3.08
2540 2845 2.254508 GTTACTACCCACTGTGGAGGT 58.745 52.381 27.94 21.84 40.96 3.85
2541 2846 2.253610 TGTTACTACCCACTGTGGAGG 58.746 52.381 27.94 17.76 40.96 4.30
2542 2847 5.128827 ACATATGTTACTACCCACTGTGGAG 59.871 44.000 27.94 19.53 40.96 3.86
2543 2848 5.027460 ACATATGTTACTACCCACTGTGGA 58.973 41.667 27.94 8.24 40.96 4.02
2544 2849 5.116180 CACATATGTTACTACCCACTGTGG 58.884 45.833 20.01 20.01 37.25 4.17
2545 2850 5.730550 ACACATATGTTACTACCCACTGTG 58.269 41.667 5.37 0.00 34.46 3.66
2559 2864 4.701171 TGATGCATGACACAACACATATGT 59.299 37.500 2.46 1.41 42.46 2.29
2560 2865 5.032220 GTGATGCATGACACAACACATATG 58.968 41.667 11.72 0.00 37.05 1.78
2561 2866 4.945543 AGTGATGCATGACACAACACATAT 59.054 37.500 18.76 0.00 39.18 1.78
2562 2867 4.325972 AGTGATGCATGACACAACACATA 58.674 39.130 18.76 0.00 39.18 2.29
2563 2868 3.151554 AGTGATGCATGACACAACACAT 58.848 40.909 18.76 0.00 39.18 3.21
2564 2869 2.574450 AGTGATGCATGACACAACACA 58.426 42.857 18.76 0.00 39.18 3.72
2565 2870 3.003585 TGAAGTGATGCATGACACAACAC 59.996 43.478 18.76 11.21 39.18 3.32
2566 2871 3.212685 TGAAGTGATGCATGACACAACA 58.787 40.909 18.76 13.99 39.18 3.33
2567 2872 3.902261 TGAAGTGATGCATGACACAAC 57.098 42.857 18.76 11.93 39.18 3.32
2568 2873 5.456548 AAATGAAGTGATGCATGACACAA 57.543 34.783 18.76 3.33 39.18 3.33
2569 2874 6.762702 ATAAATGAAGTGATGCATGACACA 57.237 33.333 18.76 16.77 39.18 3.72
2570 2875 7.859377 CCTAATAAATGAAGTGATGCATGACAC 59.141 37.037 18.76 14.04 37.30 3.67
2571 2876 7.557358 ACCTAATAAATGAAGTGATGCATGACA 59.443 33.333 18.76 1.11 0.00 3.58
2572 2877 7.934457 ACCTAATAAATGAAGTGATGCATGAC 58.066 34.615 8.39 8.39 0.00 3.06
2573 2878 8.407832 CAACCTAATAAATGAAGTGATGCATGA 58.592 33.333 2.46 0.00 0.00 3.07
2574 2879 8.192774 ACAACCTAATAAATGAAGTGATGCATG 58.807 33.333 2.46 0.00 0.00 4.06
2575 2880 8.297470 ACAACCTAATAAATGAAGTGATGCAT 57.703 30.769 0.00 0.00 0.00 3.96
2576 2881 7.701539 ACAACCTAATAAATGAAGTGATGCA 57.298 32.000 0.00 0.00 0.00 3.96
2577 2882 9.109393 TCTACAACCTAATAAATGAAGTGATGC 57.891 33.333 0.00 0.00 0.00 3.91
2580 2885 9.871238 GAGTCTACAACCTAATAAATGAAGTGA 57.129 33.333 0.00 0.00 0.00 3.41
2581 2886 9.653287 TGAGTCTACAACCTAATAAATGAAGTG 57.347 33.333 0.00 0.00 0.00 3.16
2591 2896 9.442047 CAAGAAAAGATGAGTCTACAACCTAAT 57.558 33.333 0.00 0.00 33.30 1.73
2592 2897 8.647796 TCAAGAAAAGATGAGTCTACAACCTAA 58.352 33.333 0.00 0.00 33.30 2.69
2593 2898 8.190326 TCAAGAAAAGATGAGTCTACAACCTA 57.810 34.615 0.00 0.00 33.30 3.08
2594 2899 7.067496 TCAAGAAAAGATGAGTCTACAACCT 57.933 36.000 0.00 0.00 33.30 3.50
2595 2900 7.913674 ATCAAGAAAAGATGAGTCTACAACC 57.086 36.000 0.00 0.00 33.30 3.77
2598 2903 9.591792 CACATATCAAGAAAAGATGAGTCTACA 57.408 33.333 0.00 0.00 33.30 2.74
2599 2904 9.593134 ACACATATCAAGAAAAGATGAGTCTAC 57.407 33.333 0.00 0.00 33.30 2.59
2600 2905 9.591792 CACACATATCAAGAAAAGATGAGTCTA 57.408 33.333 0.00 0.00 33.30 2.59
2601 2906 8.316946 TCACACATATCAAGAAAAGATGAGTCT 58.683 33.333 0.00 0.00 35.82 3.24
2602 2907 8.484641 TCACACATATCAAGAAAAGATGAGTC 57.515 34.615 0.00 0.00 0.00 3.36
2647 2952 7.259290 TGAAGAAAAAGAGACATGTGGTAAC 57.741 36.000 1.15 0.00 0.00 2.50
2648 2953 8.463930 AATGAAGAAAAAGAGACATGTGGTAA 57.536 30.769 1.15 0.00 0.00 2.85
2649 2954 9.567776 TTAATGAAGAAAAAGAGACATGTGGTA 57.432 29.630 1.15 0.00 0.00 3.25
2650 2955 6.966534 AATGAAGAAAAAGAGACATGTGGT 57.033 33.333 1.15 0.00 0.00 4.16
2651 2956 9.918630 AATTAATGAAGAAAAAGAGACATGTGG 57.081 29.630 1.15 0.00 0.00 4.17
2659 2964 9.859427 TGGCATGTAATTAATGAAGAAAAAGAG 57.141 29.630 10.14 0.00 0.00 2.85
2660 2965 9.638239 GTGGCATGTAATTAATGAAGAAAAAGA 57.362 29.630 0.00 0.00 0.00 2.52
2661 2966 9.421806 TGTGGCATGTAATTAATGAAGAAAAAG 57.578 29.630 0.00 0.00 0.00 2.27
2662 2967 9.941325 ATGTGGCATGTAATTAATGAAGAAAAA 57.059 25.926 0.00 0.00 0.00 1.94
2663 2968 9.585099 GATGTGGCATGTAATTAATGAAGAAAA 57.415 29.630 0.00 0.00 0.00 2.29
2664 2969 8.747471 TGATGTGGCATGTAATTAATGAAGAAA 58.253 29.630 0.00 0.00 0.00 2.52
2665 2970 8.291191 TGATGTGGCATGTAATTAATGAAGAA 57.709 30.769 0.00 0.00 0.00 2.52
2666 2971 7.878547 TGATGTGGCATGTAATTAATGAAGA 57.121 32.000 0.00 0.00 0.00 2.87
2667 2972 7.811236 GGATGATGTGGCATGTAATTAATGAAG 59.189 37.037 0.00 0.00 0.00 3.02
2668 2973 7.287235 TGGATGATGTGGCATGTAATTAATGAA 59.713 33.333 0.00 0.00 0.00 2.57
2669 2974 6.776603 TGGATGATGTGGCATGTAATTAATGA 59.223 34.615 0.00 0.00 0.00 2.57
2670 2975 6.983984 TGGATGATGTGGCATGTAATTAATG 58.016 36.000 0.00 0.00 0.00 1.90
2671 2976 7.786046 ATGGATGATGTGGCATGTAATTAAT 57.214 32.000 0.00 0.00 0.00 1.40
2672 2977 7.600231 AATGGATGATGTGGCATGTAATTAA 57.400 32.000 0.00 0.00 0.00 1.40
2673 2978 7.600231 AAATGGATGATGTGGCATGTAATTA 57.400 32.000 0.00 0.00 0.00 1.40
2674 2979 6.488769 AAATGGATGATGTGGCATGTAATT 57.511 33.333 0.00 0.00 0.00 1.40
2675 2980 6.285224 CAAAATGGATGATGTGGCATGTAAT 58.715 36.000 0.00 0.00 0.00 1.89
2676 2981 5.662456 CAAAATGGATGATGTGGCATGTAA 58.338 37.500 0.00 0.00 0.00 2.41
2677 2982 4.441773 GCAAAATGGATGATGTGGCATGTA 60.442 41.667 0.00 0.00 0.00 2.29
2678 2983 3.680475 GCAAAATGGATGATGTGGCATGT 60.680 43.478 0.00 0.00 0.00 3.21
2679 2984 2.869801 GCAAAATGGATGATGTGGCATG 59.130 45.455 0.00 0.00 0.00 4.06
2680 2985 2.158871 GGCAAAATGGATGATGTGGCAT 60.159 45.455 0.00 0.00 0.00 4.40
2681 2986 1.207570 GGCAAAATGGATGATGTGGCA 59.792 47.619 0.00 0.00 0.00 4.92
2682 2987 1.483415 AGGCAAAATGGATGATGTGGC 59.517 47.619 0.00 0.00 0.00 5.01
2683 2988 4.209538 TCTAGGCAAAATGGATGATGTGG 58.790 43.478 0.00 0.00 0.00 4.17
2684 2989 7.230108 ACTTATCTAGGCAAAATGGATGATGTG 59.770 37.037 0.00 0.00 0.00 3.21
2685 2990 7.230108 CACTTATCTAGGCAAAATGGATGATGT 59.770 37.037 0.00 0.00 0.00 3.06
2686 2991 7.230108 ACACTTATCTAGGCAAAATGGATGATG 59.770 37.037 0.00 0.00 0.00 3.07
2687 2992 7.230108 CACACTTATCTAGGCAAAATGGATGAT 59.770 37.037 0.00 0.00 0.00 2.45
2688 2993 6.543465 CACACTTATCTAGGCAAAATGGATGA 59.457 38.462 0.00 0.00 0.00 2.92
2689 2994 6.543465 TCACACTTATCTAGGCAAAATGGATG 59.457 38.462 0.00 0.00 0.00 3.51
2690 2995 6.662755 TCACACTTATCTAGGCAAAATGGAT 58.337 36.000 0.00 0.00 0.00 3.41
2691 2996 6.061022 TCACACTTATCTAGGCAAAATGGA 57.939 37.500 0.00 0.00 0.00 3.41
2692 2997 6.319658 ACATCACACTTATCTAGGCAAAATGG 59.680 38.462 0.00 0.00 0.00 3.16
2693 2998 7.325660 ACATCACACTTATCTAGGCAAAATG 57.674 36.000 0.00 0.00 0.00 2.32
2694 2999 7.944729 AACATCACACTTATCTAGGCAAAAT 57.055 32.000 0.00 0.00 0.00 1.82
2695 3000 7.335924 GGTAACATCACACTTATCTAGGCAAAA 59.664 37.037 0.00 0.00 0.00 2.44
2696 3001 6.821665 GGTAACATCACACTTATCTAGGCAAA 59.178 38.462 0.00 0.00 0.00 3.68
2697 3002 6.070481 TGGTAACATCACACTTATCTAGGCAA 60.070 38.462 0.00 0.00 46.17 4.52
2698 3003 5.423931 TGGTAACATCACACTTATCTAGGCA 59.576 40.000 0.00 0.00 46.17 4.75
2699 3004 5.914033 TGGTAACATCACACTTATCTAGGC 58.086 41.667 0.00 0.00 46.17 3.93
2716 3021 5.625568 ATGGGAGTAACATAGGTGGTAAC 57.374 43.478 0.00 0.00 0.00 2.50
2717 3022 7.202149 CCATAATGGGAGTAACATAGGTGGTAA 60.202 40.741 0.00 0.00 32.67 2.85
2718 3023 6.271391 CCATAATGGGAGTAACATAGGTGGTA 59.729 42.308 0.00 0.00 32.67 3.25
2719 3024 5.073144 CCATAATGGGAGTAACATAGGTGGT 59.927 44.000 0.00 0.00 32.67 4.16
2720 3025 5.560724 CCATAATGGGAGTAACATAGGTGG 58.439 45.833 0.00 0.00 32.67 4.61
2735 3040 9.574516 AAAGCTTTATTAGACTACCCATAATGG 57.425 33.333 10.72 0.00 37.25 3.16
2741 3046 9.209048 TCTATCAAAGCTTTATTAGACTACCCA 57.791 33.333 12.25 0.00 0.00 4.51
2787 3092 7.744715 AGCGATTTCAGAAATTACACGTTTTAG 59.255 33.333 9.84 0.00 0.00 1.85
2789 3094 6.435428 AGCGATTTCAGAAATTACACGTTTT 58.565 32.000 9.84 0.00 0.00 2.43
2799 3104 9.202273 GACTGATCTATAAGCGATTTCAGAAAT 57.798 33.333 16.52 8.20 0.00 2.17
2803 3108 7.651304 AGTTGACTGATCTATAAGCGATTTCAG 59.349 37.037 9.79 9.79 0.00 3.02
2804 3109 7.436376 CAGTTGACTGATCTATAAGCGATTTCA 59.564 37.037 5.19 0.00 46.59 2.69
2850 3156 4.703897 TCGAAGGTTGAGAACAAAGTGAT 58.296 39.130 0.00 0.00 37.77 3.06
2859 3165 4.253685 GGATCACATTCGAAGGTTGAGAA 58.746 43.478 13.60 0.00 0.00 2.87
2885 4468 5.760253 CACAGAAAGAAGAAGGCTCTGTAAA 59.240 40.000 2.92 0.00 43.68 2.01
2895 4479 1.160137 CGGGGCACAGAAAGAAGAAG 58.840 55.000 0.00 0.00 0.00 2.85
2908 4492 0.179004 ATTGACAAAGACACGGGGCA 60.179 50.000 0.00 0.00 0.00 5.36
2909 4493 0.240945 CATTGACAAAGACACGGGGC 59.759 55.000 0.00 0.00 0.00 5.80
2911 4495 2.217750 TGACATTGACAAAGACACGGG 58.782 47.619 0.00 0.00 0.00 5.28
2913 4497 4.271049 AGACTTGACATTGACAAAGACACG 59.729 41.667 3.32 0.00 0.00 4.49
2932 4516 1.123928 CGGCCCTATCCAAGAAGACT 58.876 55.000 0.00 0.00 0.00 3.24
2933 4517 0.106894 CCGGCCCTATCCAAGAAGAC 59.893 60.000 0.00 0.00 0.00 3.01
2934 4518 1.696097 GCCGGCCCTATCCAAGAAGA 61.696 60.000 18.11 0.00 0.00 2.87
2935 4519 1.227973 GCCGGCCCTATCCAAGAAG 60.228 63.158 18.11 0.00 0.00 2.85
2937 4521 3.168528 GGCCGGCCCTATCCAAGA 61.169 66.667 36.64 0.00 0.00 3.02
2993 5700 9.084164 TGCAACTCTATCTTCGAAAGTAATTAC 57.916 33.333 7.57 7.57 0.00 1.89
2999 5706 8.723942 ATATTTGCAACTCTATCTTCGAAAGT 57.276 30.769 0.00 0.00 0.00 2.66
3000 5707 8.000991 CGATATTTGCAACTCTATCTTCGAAAG 58.999 37.037 0.00 0.00 0.00 2.62
3001 5708 7.704899 TCGATATTTGCAACTCTATCTTCGAAA 59.295 33.333 0.00 0.00 0.00 3.46
3002 5709 7.200455 TCGATATTTGCAACTCTATCTTCGAA 58.800 34.615 0.00 0.00 0.00 3.71
3003 5710 6.735130 TCGATATTTGCAACTCTATCTTCGA 58.265 36.000 0.00 5.77 0.00 3.71
3004 5711 6.993175 TCGATATTTGCAACTCTATCTTCG 57.007 37.500 0.00 3.51 0.00 3.79
3005 5712 7.117523 AGCATCGATATTTGCAACTCTATCTTC 59.882 37.037 11.05 0.00 41.35 2.87
3006 5713 6.933521 AGCATCGATATTTGCAACTCTATCTT 59.066 34.615 11.05 0.00 41.35 2.40
3007 5714 6.368243 CAGCATCGATATTTGCAACTCTATCT 59.632 38.462 11.05 0.00 41.35 1.98
3008 5715 6.367149 TCAGCATCGATATTTGCAACTCTATC 59.633 38.462 11.05 5.78 41.35 2.08
3009 5716 6.146837 GTCAGCATCGATATTTGCAACTCTAT 59.853 38.462 11.05 0.00 41.35 1.98
3010 5717 5.463392 GTCAGCATCGATATTTGCAACTCTA 59.537 40.000 11.05 0.00 41.35 2.43
3011 5718 4.272018 GTCAGCATCGATATTTGCAACTCT 59.728 41.667 11.05 0.00 41.35 3.24
3012 5719 4.034394 TGTCAGCATCGATATTTGCAACTC 59.966 41.667 11.05 0.00 41.35 3.01
3013 5720 3.940852 TGTCAGCATCGATATTTGCAACT 59.059 39.130 11.05 0.00 41.35 3.16
3014 5721 4.277257 TGTCAGCATCGATATTTGCAAC 57.723 40.909 11.05 8.82 41.35 4.17
3015 5722 4.336153 ACATGTCAGCATCGATATTTGCAA 59.664 37.500 11.05 0.00 41.35 4.08
3016 5723 3.878699 ACATGTCAGCATCGATATTTGCA 59.121 39.130 11.05 3.08 41.35 4.08
3017 5724 4.478843 ACATGTCAGCATCGATATTTGC 57.521 40.909 0.00 0.00 39.17 3.68
3018 5725 6.075918 GCTAACATGTCAGCATCGATATTTG 58.924 40.000 16.48 0.00 37.73 2.32
3019 5726 5.180117 GGCTAACATGTCAGCATCGATATTT 59.820 40.000 22.45 0.00 39.63 1.40
3020 5727 4.692625 GGCTAACATGTCAGCATCGATATT 59.307 41.667 22.45 0.00 39.63 1.28
3021 5728 4.248859 GGCTAACATGTCAGCATCGATAT 58.751 43.478 22.45 0.00 39.63 1.63
3022 5729 3.069443 TGGCTAACATGTCAGCATCGATA 59.931 43.478 22.45 0.00 39.63 2.92
3023 5730 2.158914 TGGCTAACATGTCAGCATCGAT 60.159 45.455 22.45 0.00 39.63 3.59
3024 5731 1.206849 TGGCTAACATGTCAGCATCGA 59.793 47.619 22.45 0.43 39.63 3.59
3025 5732 1.655484 TGGCTAACATGTCAGCATCG 58.345 50.000 22.45 0.00 39.63 3.84
3026 5733 3.012518 ACTTGGCTAACATGTCAGCATC 58.987 45.455 22.45 6.80 39.63 3.91
3027 5734 3.077484 ACTTGGCTAACATGTCAGCAT 57.923 42.857 22.45 2.06 39.63 3.79
3028 5735 2.566833 ACTTGGCTAACATGTCAGCA 57.433 45.000 22.45 6.20 39.63 4.41
3029 5736 3.923017 AAACTTGGCTAACATGTCAGC 57.077 42.857 12.98 12.98 36.54 4.26
3030 5737 5.215160 GTGAAAACTTGGCTAACATGTCAG 58.785 41.667 0.00 0.00 36.54 3.51
3031 5738 4.642437 TGTGAAAACTTGGCTAACATGTCA 59.358 37.500 0.00 0.00 36.54 3.58
3032 5739 5.181690 TGTGAAAACTTGGCTAACATGTC 57.818 39.130 0.00 0.00 36.54 3.06
3033 5740 5.789643 ATGTGAAAACTTGGCTAACATGT 57.210 34.783 0.00 0.00 38.94 3.21
3034 5741 5.634859 GGAATGTGAAAACTTGGCTAACATG 59.365 40.000 0.00 0.00 0.00 3.21
3035 5742 5.539955 AGGAATGTGAAAACTTGGCTAACAT 59.460 36.000 0.00 0.00 0.00 2.71
3036 5743 4.892934 AGGAATGTGAAAACTTGGCTAACA 59.107 37.500 0.00 0.00 0.00 2.41
3037 5744 5.453567 AGGAATGTGAAAACTTGGCTAAC 57.546 39.130 0.00 0.00 0.00 2.34
3038 5745 7.001674 TCTAAGGAATGTGAAAACTTGGCTAA 58.998 34.615 0.00 0.00 0.00 3.09
3039 5746 6.539173 TCTAAGGAATGTGAAAACTTGGCTA 58.461 36.000 0.00 0.00 0.00 3.93
3040 5747 5.385198 TCTAAGGAATGTGAAAACTTGGCT 58.615 37.500 0.00 0.00 0.00 4.75
3041 5748 5.705609 TCTAAGGAATGTGAAAACTTGGC 57.294 39.130 0.00 0.00 0.00 4.52
3042 5749 7.452880 TGATCTAAGGAATGTGAAAACTTGG 57.547 36.000 0.00 0.00 0.00 3.61
3043 5750 8.961294 CTTGATCTAAGGAATGTGAAAACTTG 57.039 34.615 0.00 0.00 32.56 3.16
3058 5765 5.063944 CCAAACATGTCGTCCTTGATCTAAG 59.936 44.000 0.00 0.00 36.11 2.18
3059 5766 4.935205 CCAAACATGTCGTCCTTGATCTAA 59.065 41.667 0.00 0.00 0.00 2.10
3060 5767 4.020573 ACCAAACATGTCGTCCTTGATCTA 60.021 41.667 0.00 0.00 0.00 1.98
3061 5768 3.244561 ACCAAACATGTCGTCCTTGATCT 60.245 43.478 0.00 0.00 0.00 2.75
3062 5769 3.074412 ACCAAACATGTCGTCCTTGATC 58.926 45.455 0.00 0.00 0.00 2.92
3063 5770 3.140325 ACCAAACATGTCGTCCTTGAT 57.860 42.857 0.00 0.00 0.00 2.57
3064 5771 2.616376 CAACCAAACATGTCGTCCTTGA 59.384 45.455 0.00 0.00 0.00 3.02
3065 5772 2.357637 ACAACCAAACATGTCGTCCTTG 59.642 45.455 0.00 0.00 0.00 3.61
3066 5773 2.616842 GACAACCAAACATGTCGTCCTT 59.383 45.455 0.00 0.00 36.89 3.36
3067 5774 2.218603 GACAACCAAACATGTCGTCCT 58.781 47.619 0.00 0.00 36.89 3.85
3068 5775 2.681152 GACAACCAAACATGTCGTCC 57.319 50.000 0.00 0.00 36.89 4.79
3072 5779 2.030805 GGCTCAGACAACCAAACATGTC 60.031 50.000 0.00 0.00 44.92 3.06
3073 5780 1.956477 GGCTCAGACAACCAAACATGT 59.044 47.619 0.00 0.00 0.00 3.21
3074 5781 1.270550 GGGCTCAGACAACCAAACATG 59.729 52.381 0.00 0.00 0.00 3.21
3075 5782 1.145738 AGGGCTCAGACAACCAAACAT 59.854 47.619 0.00 0.00 0.00 2.71
3076 5783 0.550914 AGGGCTCAGACAACCAAACA 59.449 50.000 0.00 0.00 0.00 2.83
3077 5784 2.561478 TAGGGCTCAGACAACCAAAC 57.439 50.000 0.00 0.00 0.00 2.93
3078 5785 2.642311 TCATAGGGCTCAGACAACCAAA 59.358 45.455 0.00 0.00 0.00 3.28
3079 5786 2.265367 TCATAGGGCTCAGACAACCAA 58.735 47.619 0.00 0.00 0.00 3.67
3080 5787 1.951209 TCATAGGGCTCAGACAACCA 58.049 50.000 0.00 0.00 0.00 3.67
3081 5788 2.224402 GGATCATAGGGCTCAGACAACC 60.224 54.545 0.00 0.00 0.00 3.77
3082 5789 2.435805 TGGATCATAGGGCTCAGACAAC 59.564 50.000 0.00 0.00 0.00 3.32
3083 5790 2.763039 TGGATCATAGGGCTCAGACAA 58.237 47.619 0.00 0.00 0.00 3.18
3084 5791 2.477104 TGGATCATAGGGCTCAGACA 57.523 50.000 0.00 0.00 0.00 3.41
3085 5792 4.363991 AAATGGATCATAGGGCTCAGAC 57.636 45.455 0.00 0.00 0.00 3.51
3086 5793 4.166725 ACAAAATGGATCATAGGGCTCAGA 59.833 41.667 0.00 0.00 0.00 3.27
3087 5794 4.467769 ACAAAATGGATCATAGGGCTCAG 58.532 43.478 0.00 0.00 0.00 3.35
3088 5795 4.524802 ACAAAATGGATCATAGGGCTCA 57.475 40.909 0.00 0.00 0.00 4.26
3089 5796 5.649831 GGATACAAAATGGATCATAGGGCTC 59.350 44.000 5.03 0.00 39.50 4.70
3090 5797 5.517299 GGGATACAAAATGGATCATAGGGCT 60.517 44.000 5.03 0.00 39.50 5.19
3091 5798 4.706962 GGGATACAAAATGGATCATAGGGC 59.293 45.833 5.03 0.00 39.50 5.19
3092 5799 4.943705 CGGGATACAAAATGGATCATAGGG 59.056 45.833 5.03 0.00 39.50 3.53
3093 5800 4.396166 GCGGGATACAAAATGGATCATAGG 59.604 45.833 5.03 0.00 39.50 2.57
3094 5801 5.003160 TGCGGGATACAAAATGGATCATAG 58.997 41.667 5.03 0.00 39.50 2.23
3095 5802 4.979335 TGCGGGATACAAAATGGATCATA 58.021 39.130 5.03 0.00 39.50 2.15
3096 5803 3.831323 TGCGGGATACAAAATGGATCAT 58.169 40.909 5.03 0.00 39.50 2.45
3097 5804 3.289407 TGCGGGATACAAAATGGATCA 57.711 42.857 5.03 0.00 39.50 2.92
3098 5805 4.853924 ATTGCGGGATACAAAATGGATC 57.146 40.909 0.00 0.00 36.98 3.36
3099 5806 5.104982 ACAAATTGCGGGATACAAAATGGAT 60.105 36.000 0.00 0.00 39.74 3.41
3100 5807 4.221703 ACAAATTGCGGGATACAAAATGGA 59.778 37.500 0.00 0.00 39.74 3.41
3101 5808 4.329528 CACAAATTGCGGGATACAAAATGG 59.670 41.667 0.00 0.00 39.74 3.16
3102 5809 5.167121 TCACAAATTGCGGGATACAAAATG 58.833 37.500 0.00 0.00 39.74 2.32
3103 5810 5.398603 TCACAAATTGCGGGATACAAAAT 57.601 34.783 0.00 0.00 39.74 1.82
3104 5811 4.855715 TCACAAATTGCGGGATACAAAA 57.144 36.364 0.00 0.00 39.74 2.44
3105 5812 4.855715 TTCACAAATTGCGGGATACAAA 57.144 36.364 0.00 0.00 39.74 2.83
3106 5813 4.855715 TTTCACAAATTGCGGGATACAA 57.144 36.364 0.00 0.00 39.74 2.41
3107 5814 5.398603 AATTTCACAAATTGCGGGATACA 57.601 34.783 0.00 0.00 39.50 2.29
3108 5815 5.949233 GAATTTCACAAATTGCGGGATAC 57.051 39.130 0.00 0.00 40.97 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.