Multiple sequence alignment - TraesCS2D01G106900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G106900 chr2D 100.000 1818 0 0 1 1818 59165619 59163802 0.000000e+00 3358.0
1 TraesCS2D01G106900 chr2D 100.000 464 0 0 2002 2465 59163618 59163155 0.000000e+00 857.0
2 TraesCS2D01G106900 chr2D 88.321 548 59 3 946 1489 59452088 59451542 0.000000e+00 652.0
3 TraesCS2D01G106900 chr2D 97.959 147 3 0 2319 2465 650382327 650382181 3.150000e-64 255.0
4 TraesCS2D01G106900 chr2B 92.635 1385 81 7 385 1760 92164817 92163445 0.000000e+00 1973.0
5 TraesCS2D01G106900 chr2B 87.273 550 64 5 946 1490 92490153 92489605 7.490000e-175 623.0
6 TraesCS2D01G106900 chr2B 88.199 322 33 5 1 320 92166125 92165807 1.790000e-101 379.0
7 TraesCS2D01G106900 chr2B 86.505 289 37 2 2032 2319 92140697 92140410 1.420000e-82 316.0
8 TraesCS2D01G106900 chr2B 95.946 148 6 0 2318 2465 697693459 697693606 8.810000e-60 241.0
9 TraesCS2D01G106900 chr2A 84.925 670 88 12 893 1549 58538149 58537480 0.000000e+00 665.0
10 TraesCS2D01G106900 chr2A 88.525 549 58 3 946 1490 58549894 58549347 0.000000e+00 660.0
11 TraesCS2D01G106900 chr2A 89.384 292 26 1 284 575 58538437 58538151 1.800000e-96 363.0
12 TraesCS2D01G106900 chr2A 88.112 286 31 3 1 284 58538750 58538466 1.090000e-88 337.0
13 TraesCS2D01G106900 chr2A 81.585 429 46 15 1 400 59139499 59139923 8.500000e-85 324.0
14 TraesCS2D01G106900 chr2A 91.837 49 3 1 1536 1583 712303914 712303866 1.580000e-07 67.6
15 TraesCS2D01G106900 chr5B 87.107 318 40 1 2002 2319 523526362 523526678 2.330000e-95 359.0
16 TraesCS2D01G106900 chr5B 86.486 222 29 1 2002 2223 523477213 523477433 2.450000e-60 243.0
17 TraesCS2D01G106900 chr5B 94.558 147 8 0 2319 2465 640510714 640510860 6.860000e-56 228.0
18 TraesCS2D01G106900 chr1D 81.962 316 50 3 2004 2319 438605332 438605640 6.760000e-66 261.0
19 TraesCS2D01G106900 chr4D 96.644 149 4 1 2317 2465 372978737 372978884 1.890000e-61 246.0
20 TraesCS2D01G106900 chr4D 95.333 150 7 0 2316 2465 6925768 6925917 3.170000e-59 239.0
21 TraesCS2D01G106900 chr7D 95.918 147 6 0 2318 2464 618278663 618278809 3.170000e-59 239.0
22 TraesCS2D01G106900 chr6A 95.238 147 7 0 2319 2465 447675378 447675524 1.470000e-57 233.0
23 TraesCS2D01G106900 chr6B 91.156 147 13 0 2319 2465 63988879 63988733 1.490000e-47 200.0
24 TraesCS2D01G106900 chr1A 93.233 133 9 0 2319 2451 302015806 302015938 1.930000e-46 196.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G106900 chr2D 59163155 59165619 2464 True 2107.5 3358 100.000000 1 2465 2 chr2D.!!$R3 2464
1 TraesCS2D01G106900 chr2D 59451542 59452088 546 True 652.0 652 88.321000 946 1489 1 chr2D.!!$R1 543
2 TraesCS2D01G106900 chr2B 92163445 92166125 2680 True 1176.0 1973 90.417000 1 1760 2 chr2B.!!$R3 1759
3 TraesCS2D01G106900 chr2B 92489605 92490153 548 True 623.0 623 87.273000 946 1490 1 chr2B.!!$R2 544
4 TraesCS2D01G106900 chr2A 58549347 58549894 547 True 660.0 660 88.525000 946 1490 1 chr2A.!!$R1 544
5 TraesCS2D01G106900 chr2A 58537480 58538750 1270 True 455.0 665 87.473667 1 1549 3 chr2A.!!$R3 1548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
54 56 0.178958 CGCTACCCCCTCCTCACTAT 60.179 60.0 0.0 0.0 0.0 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1611 2584 0.105142 GGCTACATAGAGGGTCCCCA 60.105 60.0 3.51 0.0 38.92 4.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 56 0.178958 CGCTACCCCCTCCTCACTAT 60.179 60.000 0.00 0.00 0.00 2.12
124 126 5.649831 GGAACATGTCTTCTAGGCTGAAAAT 59.350 40.000 0.00 0.00 0.00 1.82
129 131 5.171476 TGTCTTCTAGGCTGAAAATTCTCG 58.829 41.667 0.00 0.00 0.00 4.04
130 132 5.047306 TGTCTTCTAGGCTGAAAATTCTCGA 60.047 40.000 0.00 0.00 0.00 4.04
137 139 3.545031 GGCTGAAAATTCTCGATCGCTTC 60.545 47.826 11.09 6.59 0.00 3.86
196 198 0.875908 CGATGGCCGTGGTATGAGTG 60.876 60.000 0.00 0.00 0.00 3.51
314 346 3.533907 TCCCATGGCTATAAGGGGAAAAA 59.466 43.478 6.09 0.00 44.59 1.94
320 352 7.290014 CCATGGCTATAAGGGGAAAAACTTAAT 59.710 37.037 0.00 0.00 33.36 1.40
328 360 9.884636 ATAAGGGGAAAAACTTAATTATGTTGC 57.115 29.630 15.27 9.30 33.36 4.17
351 994 4.932200 CGCCTACATATTTTGAGATCTCCC 59.068 45.833 20.03 0.00 0.00 4.30
352 995 5.279708 CGCCTACATATTTTGAGATCTCCCT 60.280 44.000 20.03 4.69 0.00 4.20
404 1361 3.061429 GCATTAGAGACGAGCTTCACAAC 59.939 47.826 0.00 0.00 0.00 3.32
468 1425 5.175308 TGATCACGCACATTCAACAATTTTG 59.825 36.000 0.00 0.00 0.00 2.44
474 1431 4.496010 GCACATTCAACAATTTTGCAAGCA 60.496 37.500 0.00 0.00 32.09 3.91
507 1464 0.961753 GCCCAGGTTCAACTTCAAGG 59.038 55.000 0.00 0.00 0.00 3.61
522 1479 0.250295 CAAGGTGACACGGTGGATGT 60.250 55.000 13.48 0.00 0.00 3.06
523 1480 0.472471 AAGGTGACACGGTGGATGTT 59.528 50.000 13.48 0.00 0.00 2.71
524 1481 0.472471 AGGTGACACGGTGGATGTTT 59.528 50.000 13.48 0.00 0.00 2.83
525 1482 1.133915 AGGTGACACGGTGGATGTTTT 60.134 47.619 13.48 0.00 0.00 2.43
526 1483 1.679153 GGTGACACGGTGGATGTTTTT 59.321 47.619 13.48 0.00 0.00 1.94
585 1543 8.019669 GTCTATTAAGTGACTTCGTCTTACACA 58.980 37.037 0.00 0.00 34.47 3.72
591 1549 6.509656 AGTGACTTCGTCTTACACAACATTA 58.490 36.000 0.00 0.00 34.47 1.90
592 1550 6.982141 AGTGACTTCGTCTTACACAACATTAA 59.018 34.615 0.00 0.00 34.47 1.40
593 1551 7.656137 AGTGACTTCGTCTTACACAACATTAAT 59.344 33.333 0.00 0.00 34.47 1.40
594 1552 8.280497 GTGACTTCGTCTTACACAACATTAATT 58.720 33.333 0.00 0.00 33.15 1.40
595 1553 9.478768 TGACTTCGTCTTACACAACATTAATTA 57.521 29.630 0.00 0.00 33.15 1.40
618 1576 0.321653 GTTGGTGCCTCTTCCGTCAT 60.322 55.000 0.00 0.00 0.00 3.06
701 1659 8.695456 GGTTTGTCTATATTTGGTCAATGGATT 58.305 33.333 0.00 0.00 0.00 3.01
730 1689 3.970746 AATGGGAGGGCCAAGCTGC 62.971 63.158 6.18 0.00 35.15 5.25
786 1752 8.850156 ACACATAGAATTTGTCCAAATATAGGC 58.150 33.333 5.73 0.00 39.88 3.93
825 1791 2.681848 GGTGTCATCAAGAGCTGGATTG 59.318 50.000 0.00 0.00 0.00 2.67
921 1887 1.149401 GAGGGCATAGGTGGAAGGC 59.851 63.158 0.00 0.00 0.00 4.35
937 1903 3.202906 GAAGGCTATGGCATTGTTCGTA 58.797 45.455 5.44 0.00 42.73 3.43
1089 2058 3.723348 GAGGCGGCGTGGTTCAAC 61.723 66.667 9.37 0.00 0.00 3.18
1098 2067 1.768112 CGTGGTTCAACGCGGAGTTT 61.768 55.000 12.47 0.00 42.02 2.66
1138 2107 0.802222 CATGACCGCGTTCGACATCT 60.802 55.000 4.92 0.00 38.10 2.90
1182 2151 3.376935 CTCTGGGATGTTCGGCGCT 62.377 63.158 7.64 0.00 0.00 5.92
1233 2202 4.063967 CCCGCCACTGTCGTGCTA 62.064 66.667 0.00 0.00 39.86 3.49
1238 2207 2.656646 CACTGTCGTGCTAGCCCA 59.343 61.111 13.29 2.85 33.82 5.36
1256 2225 3.839432 GGTCGAGGAAGCCGGGAG 61.839 72.222 2.18 0.00 0.00 4.30
1318 2290 3.740397 CGGTGTACGTGGAGGCGA 61.740 66.667 0.00 0.00 37.93 5.54
1606 2579 2.899256 TGGGAGGCAAGAAAATTTCCAG 59.101 45.455 1.57 0.00 0.00 3.86
1611 2584 3.325716 AGGCAAGAAAATTTCCAGCACAT 59.674 39.130 17.55 4.81 33.26 3.21
1631 2604 3.552594 GGGACCCTCTATGTAGCCA 57.447 57.895 2.09 0.00 0.00 4.75
1632 2605 1.802553 GGGACCCTCTATGTAGCCAA 58.197 55.000 2.09 0.00 0.00 4.52
1682 2655 5.900865 TTTCTTCGGGTTGTGTTAAAGTT 57.099 34.783 0.00 0.00 0.00 2.66
1683 2656 4.886247 TCTTCGGGTTGTGTTAAAGTTG 57.114 40.909 0.00 0.00 0.00 3.16
1690 2663 3.490526 GGTTGTGTTAAAGTTGCATGCAG 59.509 43.478 21.50 0.00 0.00 4.41
1763 2736 2.032071 CGGGCAGGACGGAAAAGT 59.968 61.111 0.00 0.00 0.00 2.66
1764 2737 1.294138 CGGGCAGGACGGAAAAGTA 59.706 57.895 0.00 0.00 0.00 2.24
1765 2738 1.017701 CGGGCAGGACGGAAAAGTAC 61.018 60.000 0.00 0.00 0.00 2.73
1766 2739 0.035739 GGGCAGGACGGAAAAGTACA 59.964 55.000 0.00 0.00 0.00 2.90
1767 2740 1.543871 GGGCAGGACGGAAAAGTACAA 60.544 52.381 0.00 0.00 0.00 2.41
1768 2741 1.534163 GGCAGGACGGAAAAGTACAAC 59.466 52.381 0.00 0.00 0.00 3.32
1769 2742 2.490991 GCAGGACGGAAAAGTACAACT 58.509 47.619 0.00 0.00 0.00 3.16
1770 2743 2.223377 GCAGGACGGAAAAGTACAACTG 59.777 50.000 0.00 0.00 0.00 3.16
1771 2744 2.806244 CAGGACGGAAAAGTACAACTGG 59.194 50.000 0.00 0.00 0.00 4.00
1772 2745 1.534163 GGACGGAAAAGTACAACTGGC 59.466 52.381 0.00 0.00 0.00 4.85
1773 2746 2.490991 GACGGAAAAGTACAACTGGCT 58.509 47.619 0.00 0.00 0.00 4.75
1774 2747 2.876550 GACGGAAAAGTACAACTGGCTT 59.123 45.455 0.00 0.00 0.00 4.35
1775 2748 2.616842 ACGGAAAAGTACAACTGGCTTG 59.383 45.455 0.00 0.00 35.77 4.01
1776 2749 2.031157 CGGAAAAGTACAACTGGCTTGG 60.031 50.000 0.00 0.00 33.66 3.61
1777 2750 3.219281 GGAAAAGTACAACTGGCTTGGA 58.781 45.455 0.00 0.00 33.66 3.53
1778 2751 3.826729 GGAAAAGTACAACTGGCTTGGAT 59.173 43.478 0.00 0.00 33.66 3.41
1779 2752 4.082733 GGAAAAGTACAACTGGCTTGGATC 60.083 45.833 0.00 0.00 33.66 3.36
1780 2753 2.386661 AGTACAACTGGCTTGGATCG 57.613 50.000 0.00 0.00 33.66 3.69
1781 2754 1.899814 AGTACAACTGGCTTGGATCGA 59.100 47.619 0.00 0.00 33.66 3.59
1782 2755 2.301870 AGTACAACTGGCTTGGATCGAA 59.698 45.455 0.00 0.00 33.66 3.71
1783 2756 1.523758 ACAACTGGCTTGGATCGAAC 58.476 50.000 0.00 0.00 33.66 3.95
1784 2757 1.072331 ACAACTGGCTTGGATCGAACT 59.928 47.619 0.00 0.00 33.66 3.01
1785 2758 1.466167 CAACTGGCTTGGATCGAACTG 59.534 52.381 0.00 0.00 0.00 3.16
1786 2759 0.976641 ACTGGCTTGGATCGAACTGA 59.023 50.000 0.00 0.00 0.00 3.41
1787 2760 1.338200 ACTGGCTTGGATCGAACTGAC 60.338 52.381 0.00 0.00 0.00 3.51
1788 2761 0.684535 TGGCTTGGATCGAACTGACA 59.315 50.000 0.00 0.00 0.00 3.58
1789 2762 1.079503 GGCTTGGATCGAACTGACAC 58.920 55.000 0.00 0.00 0.00 3.67
1790 2763 1.608025 GGCTTGGATCGAACTGACACA 60.608 52.381 0.00 0.00 0.00 3.72
1791 2764 1.728971 GCTTGGATCGAACTGACACAG 59.271 52.381 0.00 0.00 37.52 3.66
1792 2765 2.610479 GCTTGGATCGAACTGACACAGA 60.610 50.000 5.76 0.00 35.18 3.41
1793 2766 3.854666 CTTGGATCGAACTGACACAGAT 58.145 45.455 5.76 0.00 35.18 2.90
1794 2767 3.510388 TGGATCGAACTGACACAGATC 57.490 47.619 5.76 2.70 37.55 2.75
1800 2773 2.600731 GAACTGACACAGATCGACAGG 58.399 52.381 5.76 0.00 35.18 4.00
1801 2774 0.891373 ACTGACACAGATCGACAGGG 59.109 55.000 5.76 0.00 35.18 4.45
1802 2775 0.174389 CTGACACAGATCGACAGGGG 59.826 60.000 0.00 0.00 32.44 4.79
1803 2776 1.257750 TGACACAGATCGACAGGGGG 61.258 60.000 0.00 0.00 0.00 5.40
1804 2777 2.187946 CACAGATCGACAGGGGGC 59.812 66.667 0.00 0.00 0.00 5.80
1805 2778 3.083997 ACAGATCGACAGGGGGCC 61.084 66.667 0.00 0.00 0.00 5.80
1806 2779 4.227134 CAGATCGACAGGGGGCCG 62.227 72.222 0.00 0.00 0.00 6.13
2023 2996 5.640189 GACCCTTTCCTTAAACTTAAGCC 57.360 43.478 1.29 0.00 38.99 4.35
2024 2997 4.077108 ACCCTTTCCTTAAACTTAAGCCG 58.923 43.478 1.29 0.00 38.99 5.52
2025 2998 3.442625 CCCTTTCCTTAAACTTAAGCCGG 59.557 47.826 1.29 0.00 38.99 6.13
2026 2999 4.329392 CCTTTCCTTAAACTTAAGCCGGA 58.671 43.478 5.05 0.00 38.99 5.14
2027 3000 4.948004 CCTTTCCTTAAACTTAAGCCGGAT 59.052 41.667 5.05 0.00 38.99 4.18
2028 3001 6.117488 CCTTTCCTTAAACTTAAGCCGGATA 58.883 40.000 5.05 0.00 38.99 2.59
2029 3002 6.771267 CCTTTCCTTAAACTTAAGCCGGATAT 59.229 38.462 5.05 0.00 38.99 1.63
2030 3003 7.935210 CCTTTCCTTAAACTTAAGCCGGATATA 59.065 37.037 5.05 0.00 38.99 0.86
2031 3004 9.333724 CTTTCCTTAAACTTAAGCCGGATATAA 57.666 33.333 5.05 0.00 38.99 0.98
2032 3005 8.667076 TTCCTTAAACTTAAGCCGGATATAAC 57.333 34.615 5.05 0.00 38.99 1.89
2033 3006 7.219322 TCCTTAAACTTAAGCCGGATATAACC 58.781 38.462 5.05 0.00 38.99 2.85
2034 3007 6.429078 CCTTAAACTTAAGCCGGATATAACCC 59.571 42.308 5.05 0.00 38.99 4.11
2035 3008 4.362470 AACTTAAGCCGGATATAACCCC 57.638 45.455 5.05 0.00 0.00 4.95
2036 3009 2.301009 ACTTAAGCCGGATATAACCCCG 59.699 50.000 5.05 0.00 44.94 5.73
2041 3014 3.502237 CGGATATAACCCCGGTTCG 57.498 57.895 1.47 0.00 41.89 3.95
2042 3015 0.961019 CGGATATAACCCCGGTTCGA 59.039 55.000 1.47 0.00 41.89 3.71
2043 3016 1.340889 CGGATATAACCCCGGTTCGAA 59.659 52.381 1.47 0.00 41.89 3.71
2044 3017 2.224018 CGGATATAACCCCGGTTCGAAA 60.224 50.000 0.00 0.00 41.89 3.46
2045 3018 3.396560 GGATATAACCCCGGTTCGAAAG 58.603 50.000 0.00 0.00 39.31 2.62
2046 3019 3.181462 GGATATAACCCCGGTTCGAAAGT 60.181 47.826 0.00 0.00 39.31 2.66
2047 3020 4.039124 GGATATAACCCCGGTTCGAAAGTA 59.961 45.833 0.00 0.00 39.31 2.24
2048 3021 5.279657 GGATATAACCCCGGTTCGAAAGTAT 60.280 44.000 0.00 0.00 39.31 2.12
2049 3022 2.865119 AACCCCGGTTCGAAAGTATT 57.135 45.000 0.00 0.00 32.09 1.89
2050 3023 2.865119 ACCCCGGTTCGAAAGTATTT 57.135 45.000 0.00 0.00 43.98 1.40
2051 3024 3.144657 ACCCCGGTTCGAAAGTATTTT 57.855 42.857 0.00 0.00 39.27 1.82
2052 3025 4.284829 ACCCCGGTTCGAAAGTATTTTA 57.715 40.909 0.00 0.00 39.27 1.52
2053 3026 4.256110 ACCCCGGTTCGAAAGTATTTTAG 58.744 43.478 0.00 0.00 39.27 1.85
2054 3027 3.624410 CCCCGGTTCGAAAGTATTTTAGG 59.376 47.826 0.00 0.00 39.27 2.69
2055 3028 4.506758 CCCGGTTCGAAAGTATTTTAGGA 58.493 43.478 0.00 0.00 39.27 2.94
2056 3029 5.121105 CCCGGTTCGAAAGTATTTTAGGAT 58.879 41.667 0.00 0.00 39.27 3.24
2057 3030 5.235831 CCCGGTTCGAAAGTATTTTAGGATC 59.764 44.000 0.00 0.00 39.27 3.36
2058 3031 6.047231 CCGGTTCGAAAGTATTTTAGGATCT 58.953 40.000 0.00 0.00 39.27 2.75
2059 3032 6.018994 CCGGTTCGAAAGTATTTTAGGATCTG 60.019 42.308 0.00 0.00 39.27 2.90
2060 3033 6.755141 CGGTTCGAAAGTATTTTAGGATCTGA 59.245 38.462 0.00 0.00 39.27 3.27
2061 3034 7.254017 CGGTTCGAAAGTATTTTAGGATCTGAC 60.254 40.741 0.00 0.00 39.27 3.51
2062 3035 7.011202 GGTTCGAAAGTATTTTAGGATCTGACC 59.989 40.741 0.00 0.00 39.27 4.02
2063 3036 6.579865 TCGAAAGTATTTTAGGATCTGACCC 58.420 40.000 0.00 0.00 39.27 4.46
2064 3037 6.383147 TCGAAAGTATTTTAGGATCTGACCCT 59.617 38.462 0.00 0.00 39.27 4.34
2065 3038 7.048512 CGAAAGTATTTTAGGATCTGACCCTT 58.951 38.462 0.00 0.00 39.27 3.95
2066 3039 7.553044 CGAAAGTATTTTAGGATCTGACCCTTT 59.447 37.037 0.00 0.00 39.27 3.11
2067 3040 9.244292 GAAAGTATTTTAGGATCTGACCCTTTT 57.756 33.333 0.00 0.00 39.27 2.27
2068 3041 9.601810 AAAGTATTTTAGGATCTGACCCTTTTT 57.398 29.630 0.00 0.00 31.62 1.94
2069 3042 8.809468 AGTATTTTAGGATCTGACCCTTTTTC 57.191 34.615 0.00 0.00 35.30 2.29
2070 3043 8.615705 AGTATTTTAGGATCTGACCCTTTTTCT 58.384 33.333 0.00 0.00 35.30 2.52
2071 3044 9.901172 GTATTTTAGGATCTGACCCTTTTTCTA 57.099 33.333 0.00 0.00 35.30 2.10
2072 3045 8.809468 ATTTTAGGATCTGACCCTTTTTCTAC 57.191 34.615 0.00 0.00 35.30 2.59
2073 3046 4.846168 AGGATCTGACCCTTTTTCTACC 57.154 45.455 0.00 0.00 0.00 3.18
2074 3047 3.197983 AGGATCTGACCCTTTTTCTACCG 59.802 47.826 0.00 0.00 0.00 4.02
2075 3048 3.197116 GGATCTGACCCTTTTTCTACCGA 59.803 47.826 0.00 0.00 0.00 4.69
2076 3049 3.672767 TCTGACCCTTTTTCTACCGAC 57.327 47.619 0.00 0.00 0.00 4.79
2077 3050 2.967201 TCTGACCCTTTTTCTACCGACA 59.033 45.455 0.00 0.00 0.00 4.35
2078 3051 3.581332 TCTGACCCTTTTTCTACCGACAT 59.419 43.478 0.00 0.00 0.00 3.06
2079 3052 3.670625 TGACCCTTTTTCTACCGACATG 58.329 45.455 0.00 0.00 0.00 3.21
2080 3053 3.007635 GACCCTTTTTCTACCGACATGG 58.992 50.000 0.00 0.00 46.41 3.66
2090 3063 3.210857 CCGACATGGTCTTTGACGT 57.789 52.632 0.00 0.00 32.65 4.34
2091 3064 1.508632 CCGACATGGTCTTTGACGTT 58.491 50.000 0.00 0.00 32.65 3.99
2092 3065 2.679450 CCGACATGGTCTTTGACGTTA 58.321 47.619 0.00 0.00 32.65 3.18
2093 3066 2.666508 CCGACATGGTCTTTGACGTTAG 59.333 50.000 0.00 0.00 32.65 2.34
2094 3067 2.666508 CGACATGGTCTTTGACGTTAGG 59.333 50.000 0.00 0.00 32.65 2.69
2095 3068 3.000727 GACATGGTCTTTGACGTTAGGG 58.999 50.000 0.00 0.00 32.65 3.53
2096 3069 2.370849 ACATGGTCTTTGACGTTAGGGT 59.629 45.455 0.00 0.00 32.65 4.34
2097 3070 3.181448 ACATGGTCTTTGACGTTAGGGTT 60.181 43.478 0.00 0.00 32.65 4.11
2098 3071 4.040706 ACATGGTCTTTGACGTTAGGGTTA 59.959 41.667 0.00 0.00 32.65 2.85
2099 3072 3.993920 TGGTCTTTGACGTTAGGGTTAC 58.006 45.455 0.00 0.00 32.65 2.50
2100 3073 3.387374 TGGTCTTTGACGTTAGGGTTACA 59.613 43.478 0.00 0.00 32.65 2.41
2101 3074 3.742882 GGTCTTTGACGTTAGGGTTACAC 59.257 47.826 0.00 0.00 32.65 2.90
2102 3075 4.502087 GGTCTTTGACGTTAGGGTTACACT 60.502 45.833 0.00 0.00 32.65 3.55
2103 3076 4.446719 GTCTTTGACGTTAGGGTTACACTG 59.553 45.833 0.00 0.00 0.00 3.66
2104 3077 2.443887 TGACGTTAGGGTTACACTGC 57.556 50.000 0.00 0.00 0.00 4.40
2105 3078 1.001181 TGACGTTAGGGTTACACTGCC 59.999 52.381 0.00 0.00 0.00 4.85
2106 3079 1.274447 GACGTTAGGGTTACACTGCCT 59.726 52.381 0.00 0.00 0.00 4.75
2107 3080 2.493278 GACGTTAGGGTTACACTGCCTA 59.507 50.000 0.00 0.00 0.00 3.93
2108 3081 2.232208 ACGTTAGGGTTACACTGCCTAC 59.768 50.000 0.00 0.00 0.00 3.18
2109 3082 2.417787 CGTTAGGGTTACACTGCCTACC 60.418 54.545 0.00 0.00 0.00 3.18
2110 3083 1.477553 TAGGGTTACACTGCCTACCG 58.522 55.000 0.00 0.00 0.00 4.02
2111 3084 1.449070 GGGTTACACTGCCTACCGC 60.449 63.158 0.00 0.00 38.31 5.68
2112 3085 1.449070 GGTTACACTGCCTACCGCC 60.449 63.158 0.00 0.00 36.24 6.13
2113 3086 1.294138 GTTACACTGCCTACCGCCA 59.706 57.895 0.00 0.00 36.24 5.69
2114 3087 0.107848 GTTACACTGCCTACCGCCAT 60.108 55.000 0.00 0.00 36.24 4.40
2115 3088 0.107897 TTACACTGCCTACCGCCATG 60.108 55.000 0.00 0.00 36.24 3.66
2116 3089 1.966901 TACACTGCCTACCGCCATGG 61.967 60.000 7.63 7.63 46.41 3.66
2132 3105 3.685139 CATGGTCTATGGCGGTAGAAT 57.315 47.619 1.58 0.00 32.81 2.40
2133 3106 4.008074 CATGGTCTATGGCGGTAGAATT 57.992 45.455 1.58 0.00 32.81 2.17
2134 3107 4.389374 CATGGTCTATGGCGGTAGAATTT 58.611 43.478 1.58 0.00 32.81 1.82
2135 3108 5.547465 CATGGTCTATGGCGGTAGAATTTA 58.453 41.667 1.58 0.00 32.81 1.40
2136 3109 5.617528 TGGTCTATGGCGGTAGAATTTAA 57.382 39.130 1.58 0.00 32.81 1.52
2137 3110 5.362263 TGGTCTATGGCGGTAGAATTTAAC 58.638 41.667 1.58 0.00 32.81 2.01
2138 3111 5.129815 TGGTCTATGGCGGTAGAATTTAACT 59.870 40.000 1.58 0.00 32.81 2.24
2139 3112 5.465724 GGTCTATGGCGGTAGAATTTAACTG 59.534 44.000 1.58 0.00 32.81 3.16
2140 3113 5.050295 GTCTATGGCGGTAGAATTTAACTGC 60.050 44.000 13.72 13.72 45.38 4.40
2141 3114 2.004017 TGGCGGTAGAATTTAACTGCG 58.996 47.619 14.98 3.40 46.75 5.18
2142 3115 2.004733 GGCGGTAGAATTTAACTGCGT 58.995 47.619 14.98 0.00 46.75 5.24
2143 3116 2.030091 GGCGGTAGAATTTAACTGCGTC 59.970 50.000 14.98 3.45 46.75 5.19
2144 3117 2.669434 GCGGTAGAATTTAACTGCGTCA 59.331 45.455 8.61 0.00 38.16 4.35
2145 3118 3.308866 GCGGTAGAATTTAACTGCGTCAT 59.691 43.478 8.61 0.00 38.16 3.06
2146 3119 4.550255 GCGGTAGAATTTAACTGCGTCATC 60.550 45.833 8.61 0.00 38.16 2.92
2147 3120 4.565166 CGGTAGAATTTAACTGCGTCATCA 59.435 41.667 0.00 0.00 0.00 3.07
2148 3121 5.500290 CGGTAGAATTTAACTGCGTCATCAC 60.500 44.000 0.00 0.00 0.00 3.06
2149 3122 5.350365 GGTAGAATTTAACTGCGTCATCACA 59.650 40.000 0.00 0.00 0.00 3.58
2150 3123 6.037172 GGTAGAATTTAACTGCGTCATCACAT 59.963 38.462 0.00 0.00 0.00 3.21
2151 3124 6.111768 AGAATTTAACTGCGTCATCACATC 57.888 37.500 0.00 0.00 0.00 3.06
2152 3125 3.989705 TTTAACTGCGTCATCACATCG 57.010 42.857 0.00 0.00 0.00 3.84
2153 3126 2.647529 TAACTGCGTCATCACATCGT 57.352 45.000 0.00 0.00 0.00 3.73
2154 3127 1.795768 AACTGCGTCATCACATCGTT 58.204 45.000 0.00 0.00 0.00 3.85
2155 3128 2.647529 ACTGCGTCATCACATCGTTA 57.352 45.000 0.00 0.00 0.00 3.18
2156 3129 3.165058 ACTGCGTCATCACATCGTTAT 57.835 42.857 0.00 0.00 0.00 1.89
2157 3130 2.860136 ACTGCGTCATCACATCGTTATG 59.140 45.455 0.00 0.00 39.17 1.90
2158 3131 3.115554 CTGCGTCATCACATCGTTATGA 58.884 45.455 0.00 0.00 36.54 2.15
2159 3132 2.857748 TGCGTCATCACATCGTTATGAC 59.142 45.455 10.14 10.14 41.18 3.06
2176 3149 7.621102 CGTTATGACGTTAAAAATACCCTACC 58.379 38.462 1.18 0.00 44.08 3.18
2177 3150 7.277539 CGTTATGACGTTAAAAATACCCTACCA 59.722 37.037 1.18 0.00 44.08 3.25
2178 3151 6.990341 ATGACGTTAAAAATACCCTACCAC 57.010 37.500 0.00 0.00 0.00 4.16
2179 3152 5.244755 TGACGTTAAAAATACCCTACCACC 58.755 41.667 0.00 0.00 0.00 4.61
2180 3153 5.221803 TGACGTTAAAAATACCCTACCACCA 60.222 40.000 0.00 0.00 0.00 4.17
2181 3154 5.629125 ACGTTAAAAATACCCTACCACCAA 58.371 37.500 0.00 0.00 0.00 3.67
2182 3155 5.706833 ACGTTAAAAATACCCTACCACCAAG 59.293 40.000 0.00 0.00 0.00 3.61
2183 3156 5.124297 CGTTAAAAATACCCTACCACCAAGG 59.876 44.000 0.00 0.00 45.67 3.61
2193 3166 2.629002 CCACCAAGGTCTTTGACGG 58.371 57.895 0.00 0.00 39.21 4.79
2194 3167 0.179029 CCACCAAGGTCTTTGACGGT 60.179 55.000 0.00 0.00 39.21 4.83
2195 3168 1.071071 CCACCAAGGTCTTTGACGGTA 59.929 52.381 0.00 0.00 39.21 4.02
2196 3169 2.413837 CACCAAGGTCTTTGACGGTAG 58.586 52.381 0.00 0.00 39.21 3.18
2197 3170 2.044758 ACCAAGGTCTTTGACGGTAGT 58.955 47.619 0.00 0.00 39.21 2.73
2199 3172 2.612221 CCAAGGTCTTTGACGGTAGTCC 60.612 54.545 0.00 0.00 46.51 3.85
2213 3186 2.814336 GGTAGTCCGTTATACCCTACCG 59.186 54.545 0.00 0.00 38.58 4.02
2214 3187 1.322442 AGTCCGTTATACCCTACCGC 58.678 55.000 0.00 0.00 0.00 5.68
2215 3188 0.315251 GTCCGTTATACCCTACCGCC 59.685 60.000 0.00 0.00 0.00 6.13
2216 3189 0.106268 TCCGTTATACCCTACCGCCA 60.106 55.000 0.00 0.00 0.00 5.69
2217 3190 0.316204 CCGTTATACCCTACCGCCAG 59.684 60.000 0.00 0.00 0.00 4.85
2218 3191 0.316204 CGTTATACCCTACCGCCAGG 59.684 60.000 0.00 0.00 45.13 4.45
2219 3192 0.034476 GTTATACCCTACCGCCAGGC 59.966 60.000 0.00 0.00 42.76 4.85
2220 3193 0.105349 TTATACCCTACCGCCAGGCT 60.105 55.000 10.54 0.00 42.76 4.58
2221 3194 0.830444 TATACCCTACCGCCAGGCTG 60.830 60.000 10.54 7.75 42.76 4.85
2224 3197 4.101448 CCTACCGCCAGGCTGCTT 62.101 66.667 10.54 0.00 42.76 3.91
2225 3198 2.045926 CTACCGCCAGGCTGCTTT 60.046 61.111 10.54 0.00 42.76 3.51
2226 3199 2.359850 TACCGCCAGGCTGCTTTG 60.360 61.111 10.54 0.00 42.76 2.77
2231 3204 2.359850 CCAGGCTGCTTTGCGGTA 60.360 61.111 9.56 0.00 37.24 4.02
2232 3205 2.401766 CCAGGCTGCTTTGCGGTAG 61.402 63.158 9.56 0.00 37.24 3.18
2233 3206 2.045926 AGGCTGCTTTGCGGTAGG 60.046 61.111 0.00 0.00 37.24 3.18
2234 3207 3.134127 GGCTGCTTTGCGGTAGGG 61.134 66.667 0.00 0.00 37.24 3.53
2235 3208 2.359975 GCTGCTTTGCGGTAGGGT 60.360 61.111 0.00 0.00 37.24 4.34
2236 3209 2.399356 GCTGCTTTGCGGTAGGGTC 61.399 63.158 0.00 0.00 37.24 4.46
2237 3210 1.296715 CTGCTTTGCGGTAGGGTCT 59.703 57.895 0.00 0.00 0.00 3.85
2238 3211 1.003839 TGCTTTGCGGTAGGGTCTG 60.004 57.895 0.00 0.00 0.00 3.51
2239 3212 2.399356 GCTTTGCGGTAGGGTCTGC 61.399 63.158 0.00 0.00 39.84 4.26
2240 3213 1.003839 CTTTGCGGTAGGGTCTGCA 60.004 57.895 0.00 0.00 46.19 4.41
2242 3215 2.603473 TGCGGTAGGGTCTGCACT 60.603 61.111 0.00 0.00 43.56 4.40
2243 3216 1.304630 TGCGGTAGGGTCTGCACTA 60.305 57.895 0.00 0.00 43.56 2.74
2244 3217 0.686441 TGCGGTAGGGTCTGCACTAT 60.686 55.000 0.00 0.00 43.56 2.12
2245 3218 0.249489 GCGGTAGGGTCTGCACTATG 60.249 60.000 0.00 0.00 39.28 2.23
2246 3219 1.112113 CGGTAGGGTCTGCACTATGT 58.888 55.000 0.00 0.00 32.54 2.29
2247 3220 1.480954 CGGTAGGGTCTGCACTATGTT 59.519 52.381 0.00 0.00 32.54 2.71
2248 3221 2.093658 CGGTAGGGTCTGCACTATGTTT 60.094 50.000 0.00 0.00 32.54 2.83
2249 3222 3.270877 GGTAGGGTCTGCACTATGTTTG 58.729 50.000 0.00 0.00 32.54 2.93
2250 3223 2.496899 AGGGTCTGCACTATGTTTGG 57.503 50.000 0.00 0.00 0.00 3.28
2251 3224 1.004745 AGGGTCTGCACTATGTTTGGG 59.995 52.381 0.00 0.00 0.00 4.12
2252 3225 1.271926 GGGTCTGCACTATGTTTGGGT 60.272 52.381 0.00 0.00 0.00 4.51
2253 3226 2.514803 GGTCTGCACTATGTTTGGGTT 58.485 47.619 0.00 0.00 0.00 4.11
2254 3227 2.890945 GGTCTGCACTATGTTTGGGTTT 59.109 45.455 0.00 0.00 0.00 3.27
2255 3228 3.305335 GGTCTGCACTATGTTTGGGTTTG 60.305 47.826 0.00 0.00 0.00 2.93
2256 3229 3.568007 GTCTGCACTATGTTTGGGTTTGA 59.432 43.478 0.00 0.00 0.00 2.69
2257 3230 3.820467 TCTGCACTATGTTTGGGTTTGAG 59.180 43.478 0.00 0.00 0.00 3.02
2258 3231 2.890311 TGCACTATGTTTGGGTTTGAGG 59.110 45.455 0.00 0.00 0.00 3.86
2259 3232 2.352715 GCACTATGTTTGGGTTTGAGGC 60.353 50.000 0.00 0.00 0.00 4.70
2260 3233 3.157087 CACTATGTTTGGGTTTGAGGCT 58.843 45.455 0.00 0.00 0.00 4.58
2261 3234 3.573967 CACTATGTTTGGGTTTGAGGCTT 59.426 43.478 0.00 0.00 0.00 4.35
2262 3235 3.573967 ACTATGTTTGGGTTTGAGGCTTG 59.426 43.478 0.00 0.00 0.00 4.01
2263 3236 1.118838 TGTTTGGGTTTGAGGCTTGG 58.881 50.000 0.00 0.00 0.00 3.61
2264 3237 1.342474 TGTTTGGGTTTGAGGCTTGGA 60.342 47.619 0.00 0.00 0.00 3.53
2265 3238 1.760029 GTTTGGGTTTGAGGCTTGGAA 59.240 47.619 0.00 0.00 0.00 3.53
2266 3239 1.703411 TTGGGTTTGAGGCTTGGAAG 58.297 50.000 0.00 0.00 0.00 3.46
2267 3240 0.555769 TGGGTTTGAGGCTTGGAAGT 59.444 50.000 0.00 0.00 0.00 3.01
2268 3241 1.777878 TGGGTTTGAGGCTTGGAAGTA 59.222 47.619 0.00 0.00 0.00 2.24
2269 3242 2.175931 TGGGTTTGAGGCTTGGAAGTAA 59.824 45.455 0.00 0.00 0.00 2.24
2270 3243 3.227614 GGGTTTGAGGCTTGGAAGTAAA 58.772 45.455 0.00 0.00 0.00 2.01
2271 3244 3.005472 GGGTTTGAGGCTTGGAAGTAAAC 59.995 47.826 0.00 0.00 0.00 2.01
2272 3245 3.005472 GGTTTGAGGCTTGGAAGTAAACC 59.995 47.826 0.00 0.00 38.87 3.27
2273 3246 3.586470 TTGAGGCTTGGAAGTAAACCA 57.414 42.857 0.00 0.00 35.47 3.67
2274 3247 3.586470 TGAGGCTTGGAAGTAAACCAA 57.414 42.857 0.00 0.00 43.84 3.67
2275 3248 4.112634 TGAGGCTTGGAAGTAAACCAAT 57.887 40.909 0.00 0.00 44.74 3.16
2276 3249 3.826157 TGAGGCTTGGAAGTAAACCAATG 59.174 43.478 0.00 0.00 44.74 2.82
2277 3250 2.562738 AGGCTTGGAAGTAAACCAATGC 59.437 45.455 0.00 0.00 44.74 3.56
2278 3251 2.353704 GGCTTGGAAGTAAACCAATGCC 60.354 50.000 17.14 17.14 44.74 4.40
2279 3252 2.298729 GCTTGGAAGTAAACCAATGCCA 59.701 45.455 0.00 0.00 44.74 4.92
2280 3253 3.244044 GCTTGGAAGTAAACCAATGCCAA 60.244 43.478 0.00 0.00 44.74 4.52
2281 3254 4.742138 GCTTGGAAGTAAACCAATGCCAAA 60.742 41.667 0.00 0.00 44.74 3.28
2282 3255 4.599047 TGGAAGTAAACCAATGCCAAAG 57.401 40.909 0.00 0.00 34.25 2.77
2283 3256 3.244044 TGGAAGTAAACCAATGCCAAAGC 60.244 43.478 0.00 0.00 35.33 3.51
2284 3257 2.723124 AGTAAACCAATGCCAAAGCG 57.277 45.000 0.00 0.00 44.31 4.68
2285 3258 2.235016 AGTAAACCAATGCCAAAGCGA 58.765 42.857 0.00 0.00 44.31 4.93
2286 3259 2.825532 AGTAAACCAATGCCAAAGCGAT 59.174 40.909 0.00 0.00 44.31 4.58
2287 3260 2.368655 AAACCAATGCCAAAGCGATC 57.631 45.000 0.00 0.00 44.31 3.69
2288 3261 1.549203 AACCAATGCCAAAGCGATCT 58.451 45.000 0.00 0.00 44.31 2.75
2289 3262 0.813184 ACCAATGCCAAAGCGATCTG 59.187 50.000 0.00 0.00 44.31 2.90
2290 3263 0.101759 CCAATGCCAAAGCGATCTGG 59.898 55.000 0.00 0.00 44.31 3.86
2291 3264 1.097232 CAATGCCAAAGCGATCTGGA 58.903 50.000 0.00 0.00 44.31 3.86
2292 3265 1.098050 AATGCCAAAGCGATCTGGAC 58.902 50.000 0.00 0.00 44.31 4.02
2293 3266 0.035152 ATGCCAAAGCGATCTGGACA 60.035 50.000 0.00 0.00 44.31 4.02
2294 3267 0.035152 TGCCAAAGCGATCTGGACAT 60.035 50.000 0.00 0.00 44.31 3.06
2295 3268 0.379669 GCCAAAGCGATCTGGACATG 59.620 55.000 0.00 0.00 34.35 3.21
2296 3269 1.742761 CCAAAGCGATCTGGACATGT 58.257 50.000 0.00 0.00 34.35 3.21
2297 3270 2.905075 CCAAAGCGATCTGGACATGTA 58.095 47.619 0.00 0.00 34.35 2.29
2298 3271 2.868583 CCAAAGCGATCTGGACATGTAG 59.131 50.000 0.00 0.00 34.35 2.74
2299 3272 2.231215 AAGCGATCTGGACATGTAGC 57.769 50.000 0.00 0.00 0.00 3.58
2300 3273 1.114627 AGCGATCTGGACATGTAGCA 58.885 50.000 0.00 0.00 0.00 3.49
2301 3274 1.690893 AGCGATCTGGACATGTAGCAT 59.309 47.619 0.00 0.00 0.00 3.79
2302 3275 1.797046 GCGATCTGGACATGTAGCATG 59.203 52.381 0.00 7.48 0.00 4.06
2303 3276 2.804572 GCGATCTGGACATGTAGCATGT 60.805 50.000 13.74 13.74 34.52 3.21
2304 3277 3.552890 GCGATCTGGACATGTAGCATGTA 60.553 47.826 13.82 0.59 31.52 2.29
2305 3278 4.814147 CGATCTGGACATGTAGCATGTAT 58.186 43.478 13.82 5.13 31.52 2.29
2306 3279 4.624452 CGATCTGGACATGTAGCATGTATG 59.376 45.833 13.82 8.03 31.52 2.39
2307 3280 5.545588 GATCTGGACATGTAGCATGTATGT 58.454 41.667 13.82 0.80 37.72 2.29
2308 3281 4.948847 TCTGGACATGTAGCATGTATGTC 58.051 43.478 13.82 18.09 46.13 3.06
2309 3282 4.651045 TCTGGACATGTAGCATGTATGTCT 59.349 41.667 21.97 5.22 46.10 3.41
2310 3283 5.129320 TCTGGACATGTAGCATGTATGTCTT 59.871 40.000 21.97 0.00 46.10 3.01
2311 3284 5.744171 TGGACATGTAGCATGTATGTCTTT 58.256 37.500 21.97 0.00 46.10 2.52
2312 3285 6.179756 TGGACATGTAGCATGTATGTCTTTT 58.820 36.000 21.97 0.00 46.10 2.27
2313 3286 6.316140 TGGACATGTAGCATGTATGTCTTTTC 59.684 38.462 21.97 12.92 46.10 2.29
2314 3287 6.238484 GGACATGTAGCATGTATGTCTTTTCC 60.238 42.308 21.97 5.25 46.10 3.13
2315 3288 6.179756 ACATGTAGCATGTATGTCTTTTCCA 58.820 36.000 12.42 0.00 29.55 3.53
2316 3289 6.830324 ACATGTAGCATGTATGTCTTTTCCAT 59.170 34.615 12.42 0.00 29.55 3.41
2317 3290 7.340232 ACATGTAGCATGTATGTCTTTTCCATT 59.660 33.333 12.42 0.00 29.55 3.16
2318 3291 8.839343 CATGTAGCATGTATGTCTTTTCCATTA 58.161 33.333 0.00 0.00 0.00 1.90
2319 3292 8.208718 TGTAGCATGTATGTCTTTTCCATTAC 57.791 34.615 0.00 0.00 0.00 1.89
2320 3293 8.046708 TGTAGCATGTATGTCTTTTCCATTACT 58.953 33.333 0.00 0.00 0.00 2.24
2321 3294 9.542462 GTAGCATGTATGTCTTTTCCATTACTA 57.458 33.333 0.00 0.00 0.00 1.82
2322 3295 8.668510 AGCATGTATGTCTTTTCCATTACTAG 57.331 34.615 0.00 0.00 0.00 2.57
2323 3296 8.486210 AGCATGTATGTCTTTTCCATTACTAGA 58.514 33.333 0.00 0.00 0.00 2.43
2324 3297 9.277783 GCATGTATGTCTTTTCCATTACTAGAT 57.722 33.333 0.00 0.00 0.00 1.98
2326 3299 9.698309 ATGTATGTCTTTTCCATTACTAGATCG 57.302 33.333 0.00 0.00 0.00 3.69
2327 3300 8.141909 TGTATGTCTTTTCCATTACTAGATCGG 58.858 37.037 0.00 0.00 0.00 4.18
2328 3301 5.357257 TGTCTTTTCCATTACTAGATCGGC 58.643 41.667 0.00 0.00 0.00 5.54
2329 3302 5.105106 TGTCTTTTCCATTACTAGATCGGCA 60.105 40.000 0.00 0.00 0.00 5.69
2330 3303 5.815740 GTCTTTTCCATTACTAGATCGGCAA 59.184 40.000 0.00 0.00 0.00 4.52
2331 3304 5.815740 TCTTTTCCATTACTAGATCGGCAAC 59.184 40.000 0.00 0.00 0.00 4.17
2360 3333 3.072468 CGAGGGTGCCGGTCCTAA 61.072 66.667 15.33 0.00 32.74 2.69
2361 3334 2.582978 GAGGGTGCCGGTCCTAAC 59.417 66.667 15.33 2.15 32.74 2.34
2362 3335 3.366739 GAGGGTGCCGGTCCTAACG 62.367 68.421 15.33 0.00 32.74 3.18
2363 3336 3.384532 GGGTGCCGGTCCTAACGA 61.385 66.667 15.33 0.00 0.00 3.85
2364 3337 2.728435 GGGTGCCGGTCCTAACGAT 61.728 63.158 15.33 0.00 0.00 3.73
2365 3338 1.394266 GGGTGCCGGTCCTAACGATA 61.394 60.000 15.33 0.00 0.00 2.92
2366 3339 0.677842 GGTGCCGGTCCTAACGATAT 59.322 55.000 1.90 0.00 0.00 1.63
2367 3340 1.604693 GGTGCCGGTCCTAACGATATG 60.605 57.143 1.90 0.00 0.00 1.78
2368 3341 0.677288 TGCCGGTCCTAACGATATGG 59.323 55.000 1.90 0.00 0.00 2.74
2369 3342 0.677842 GCCGGTCCTAACGATATGGT 59.322 55.000 1.90 0.00 0.00 3.55
2370 3343 1.336609 GCCGGTCCTAACGATATGGTC 60.337 57.143 1.90 0.00 0.00 4.02
2371 3344 1.958579 CCGGTCCTAACGATATGGTCA 59.041 52.381 0.00 0.00 0.00 4.02
2372 3345 2.363038 CCGGTCCTAACGATATGGTCAA 59.637 50.000 0.00 0.00 0.00 3.18
2373 3346 3.552273 CCGGTCCTAACGATATGGTCAAG 60.552 52.174 0.00 0.00 0.00 3.02
2374 3347 3.391049 GGTCCTAACGATATGGTCAAGC 58.609 50.000 0.00 0.00 0.00 4.01
2375 3348 3.391049 GTCCTAACGATATGGTCAAGCC 58.609 50.000 0.00 0.00 37.90 4.35
2376 3349 2.035449 TCCTAACGATATGGTCAAGCCG 59.965 50.000 0.00 0.00 41.21 5.52
2377 3350 2.223971 CCTAACGATATGGTCAAGCCGT 60.224 50.000 0.00 0.00 41.21 5.68
2378 3351 1.651987 AACGATATGGTCAAGCCGTG 58.348 50.000 0.00 0.00 41.21 4.94
2379 3352 0.179084 ACGATATGGTCAAGCCGTGG 60.179 55.000 0.00 0.00 41.21 4.94
2380 3353 0.104120 CGATATGGTCAAGCCGTGGA 59.896 55.000 0.00 0.00 41.21 4.02
2381 3354 1.472552 CGATATGGTCAAGCCGTGGAA 60.473 52.381 0.00 0.00 41.21 3.53
2382 3355 2.213499 GATATGGTCAAGCCGTGGAAG 58.787 52.381 0.00 0.00 41.21 3.46
2383 3356 1.271856 TATGGTCAAGCCGTGGAAGA 58.728 50.000 0.00 0.00 41.21 2.87
2384 3357 0.620556 ATGGTCAAGCCGTGGAAGAT 59.379 50.000 0.00 0.00 41.21 2.40
2385 3358 0.036388 TGGTCAAGCCGTGGAAGATC 60.036 55.000 0.00 0.00 41.21 2.75
2386 3359 0.036388 GGTCAAGCCGTGGAAGATCA 60.036 55.000 0.00 0.00 0.00 2.92
2387 3360 1.610624 GGTCAAGCCGTGGAAGATCAA 60.611 52.381 0.00 0.00 0.00 2.57
2388 3361 1.734465 GTCAAGCCGTGGAAGATCAAG 59.266 52.381 0.00 0.00 0.00 3.02
2389 3362 0.449388 CAAGCCGTGGAAGATCAAGC 59.551 55.000 0.00 0.00 0.00 4.01
2390 3363 1.021390 AAGCCGTGGAAGATCAAGCG 61.021 55.000 0.00 0.00 0.00 4.68
2391 3364 2.464459 GCCGTGGAAGATCAAGCGG 61.464 63.158 0.00 2.77 41.79 5.52
2392 3365 2.464459 CCGTGGAAGATCAAGCGGC 61.464 63.158 0.00 0.00 32.73 6.53
2393 3366 1.741401 CGTGGAAGATCAAGCGGCA 60.741 57.895 1.45 0.00 0.00 5.69
2394 3367 1.091771 CGTGGAAGATCAAGCGGCAT 61.092 55.000 1.45 0.00 0.00 4.40
2395 3368 0.379669 GTGGAAGATCAAGCGGCATG 59.620 55.000 1.45 0.00 0.00 4.06
2396 3369 0.252761 TGGAAGATCAAGCGGCATGA 59.747 50.000 10.58 10.58 0.00 3.07
2397 3370 1.134007 TGGAAGATCAAGCGGCATGAT 60.134 47.619 19.45 19.45 40.14 2.45
2398 3371 1.266175 GGAAGATCAAGCGGCATGATG 59.734 52.381 23.65 7.05 37.64 3.07
2399 3372 0.666913 AAGATCAAGCGGCATGATGC 59.333 50.000 23.65 9.33 44.08 3.91
2413 3386 4.730657 GCATGATGCATTAGTATGAAGGC 58.269 43.478 13.36 0.00 44.26 4.35
2422 3395 7.202526 TGCATTAGTATGAAGGCAAATTTAGC 58.797 34.615 0.00 0.00 42.63 3.09
2423 3396 7.147932 TGCATTAGTATGAAGGCAAATTTAGCA 60.148 33.333 12.54 0.00 42.63 3.49
2424 3397 7.869429 GCATTAGTATGAAGGCAAATTTAGCAT 59.131 33.333 12.54 4.92 36.17 3.79
2428 3401 8.469309 AGTATGAAGGCAAATTTAGCATATGT 57.531 30.769 4.29 0.00 0.00 2.29
2429 3402 9.573166 AGTATGAAGGCAAATTTAGCATATGTA 57.427 29.630 4.29 0.00 0.00 2.29
2432 3405 8.060931 TGAAGGCAAATTTAGCATATGTAACA 57.939 30.769 4.29 0.00 0.00 2.41
2433 3406 8.190122 TGAAGGCAAATTTAGCATATGTAACAG 58.810 33.333 4.29 0.00 0.00 3.16
2434 3407 7.042797 AGGCAAATTTAGCATATGTAACAGG 57.957 36.000 4.29 0.00 0.00 4.00
2435 3408 6.833416 AGGCAAATTTAGCATATGTAACAGGA 59.167 34.615 4.29 0.00 0.00 3.86
2436 3409 6.918022 GGCAAATTTAGCATATGTAACAGGAC 59.082 38.462 4.29 0.00 0.00 3.85
2437 3410 7.416213 GGCAAATTTAGCATATGTAACAGGACA 60.416 37.037 4.29 0.00 0.00 4.02
2438 3411 7.973388 GCAAATTTAGCATATGTAACAGGACAA 59.027 33.333 4.29 0.00 31.83 3.18
2439 3412 9.289303 CAAATTTAGCATATGTAACAGGACAAC 57.711 33.333 4.29 0.00 31.83 3.32
2440 3413 6.995511 TTTAGCATATGTAACAGGACAACC 57.004 37.500 4.29 0.00 31.83 3.77
2441 3414 4.568072 AGCATATGTAACAGGACAACCA 57.432 40.909 4.29 0.00 38.94 3.67
2442 3415 4.917385 AGCATATGTAACAGGACAACCAA 58.083 39.130 4.29 0.00 38.94 3.67
2443 3416 5.509498 AGCATATGTAACAGGACAACCAAT 58.491 37.500 4.29 0.00 38.94 3.16
2444 3417 5.951747 AGCATATGTAACAGGACAACCAATT 59.048 36.000 4.29 0.00 38.94 2.32
2445 3418 7.116075 AGCATATGTAACAGGACAACCAATTA 58.884 34.615 4.29 0.00 38.94 1.40
2446 3419 7.779798 AGCATATGTAACAGGACAACCAATTAT 59.220 33.333 4.29 0.00 38.94 1.28
2447 3420 8.413229 GCATATGTAACAGGACAACCAATTATT 58.587 33.333 4.29 0.00 38.94 1.40
2448 3421 9.734620 CATATGTAACAGGACAACCAATTATTG 57.265 33.333 0.00 0.00 38.94 1.90
2449 3422 9.693739 ATATGTAACAGGACAACCAATTATTGA 57.306 29.630 6.50 0.00 38.94 2.57
2450 3423 7.447374 TGTAACAGGACAACCAATTATTGAG 57.553 36.000 6.50 0.00 38.94 3.02
2451 3424 7.001674 TGTAACAGGACAACCAATTATTGAGT 58.998 34.615 6.50 2.25 38.94 3.41
2452 3425 6.976934 AACAGGACAACCAATTATTGAGTT 57.023 33.333 6.50 6.29 38.94 3.01
2453 3426 6.575162 ACAGGACAACCAATTATTGAGTTC 57.425 37.500 6.50 1.52 38.94 3.01
2454 3427 6.068010 ACAGGACAACCAATTATTGAGTTCA 58.932 36.000 6.50 0.00 38.94 3.18
2455 3428 6.549364 ACAGGACAACCAATTATTGAGTTCAA 59.451 34.615 6.50 0.00 38.28 2.69
2456 3429 7.233348 ACAGGACAACCAATTATTGAGTTCAAT 59.767 33.333 6.50 11.69 42.78 2.57
2457 3430 7.543172 CAGGACAACCAATTATTGAGTTCAATG 59.457 37.037 15.72 2.66 41.51 2.82
2458 3431 6.813152 GGACAACCAATTATTGAGTTCAATGG 59.187 38.462 15.72 12.43 40.18 3.16
2459 3432 7.301868 ACAACCAATTATTGAGTTCAATGGT 57.698 32.000 15.72 12.98 45.34 3.55
2460 3433 8.415950 ACAACCAATTATTGAGTTCAATGGTA 57.584 30.769 15.72 3.88 45.34 3.25
2461 3434 8.865090 ACAACCAATTATTGAGTTCAATGGTAA 58.135 29.630 15.72 4.73 45.34 2.85
2462 3435 9.357652 CAACCAATTATTGAGTTCAATGGTAAG 57.642 33.333 15.72 9.29 45.34 2.34
2463 3436 8.877864 ACCAATTATTGAGTTCAATGGTAAGA 57.122 30.769 15.72 0.00 45.34 2.10
2464 3437 9.308000 ACCAATTATTGAGTTCAATGGTAAGAA 57.692 29.630 15.72 3.49 45.34 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.448013 GACAACGGAGCCAGGTAGC 60.448 63.158 0.00 0.00 0.00 3.58
15 16 2.915659 TCGACAACGGAGCCAGGT 60.916 61.111 0.00 0.00 40.21 4.00
18 19 3.998672 GGGTCGACAACGGAGCCA 61.999 66.667 18.91 0.00 40.21 4.75
26 27 3.384532 GGGGTAGCGGGTCGACAA 61.385 66.667 18.91 0.00 0.00 3.18
54 56 1.213678 CCCAGATCCCAAGAGCAATCA 59.786 52.381 0.00 0.00 0.00 2.57
129 131 1.710013 TCAAACACTCCGAAGCGATC 58.290 50.000 0.00 0.00 0.00 3.69
130 132 2.386661 ATCAAACACTCCGAAGCGAT 57.613 45.000 0.00 0.00 0.00 4.58
137 139 5.046910 ACTTATGCAAATCAAACACTCCG 57.953 39.130 0.00 0.00 0.00 4.63
208 210 0.043032 AATCCCACCCGTACCCAGTA 59.957 55.000 0.00 0.00 0.00 2.74
314 346 7.979444 ATATGTAGGCGCAACATAATTAAGT 57.021 32.000 27.91 14.61 41.72 2.24
320 352 6.540551 TCTCAAAATATGTAGGCGCAACATAA 59.459 34.615 27.91 16.12 41.72 1.90
325 357 5.368145 AGATCTCAAAATATGTAGGCGCAA 58.632 37.500 10.83 0.00 0.00 4.85
326 358 4.960938 AGATCTCAAAATATGTAGGCGCA 58.039 39.130 10.83 0.00 0.00 6.09
328 360 4.932200 GGGAGATCTCAAAATATGTAGGCG 59.068 45.833 23.85 0.00 0.00 5.52
351 994 1.376543 ATGTGCGCATTTCTCCTCAG 58.623 50.000 15.91 0.00 29.54 3.35
352 995 1.825090 AATGTGCGCATTTCTCCTCA 58.175 45.000 19.61 4.05 42.19 3.86
364 1007 2.799871 TGCATGCATCTTTAATGTGCG 58.200 42.857 18.46 0.00 41.61 5.34
486 1443 1.610522 CTTGAAGTTGAACCTGGGCAG 59.389 52.381 0.00 0.00 0.00 4.85
548 1506 5.422650 GTCACTTAATAGACTCCTCAAGGGT 59.577 44.000 0.00 0.00 36.25 4.34
585 1543 6.377146 AGAGGCACCAACGAATAATTAATGTT 59.623 34.615 0.00 0.00 0.00 2.71
591 1549 3.694566 GGAAGAGGCACCAACGAATAATT 59.305 43.478 0.00 0.00 0.00 1.40
592 1550 3.279434 GGAAGAGGCACCAACGAATAAT 58.721 45.455 0.00 0.00 0.00 1.28
593 1551 2.706890 GGAAGAGGCACCAACGAATAA 58.293 47.619 0.00 0.00 0.00 1.40
594 1552 1.404986 CGGAAGAGGCACCAACGAATA 60.405 52.381 0.00 0.00 0.00 1.75
595 1553 0.673644 CGGAAGAGGCACCAACGAAT 60.674 55.000 0.00 0.00 0.00 3.34
658 1616 4.335037 ACAAACCATGTGAAAATTTGGCAC 59.665 37.500 14.34 14.34 41.93 5.01
718 1676 2.451462 ATTTCCTGCAGCTTGGCCCT 62.451 55.000 8.66 0.00 0.00 5.19
719 1677 1.986210 ATTTCCTGCAGCTTGGCCC 60.986 57.895 8.66 0.00 0.00 5.80
720 1678 1.217244 CATTTCCTGCAGCTTGGCC 59.783 57.895 8.66 0.00 0.00 5.36
730 1689 5.300286 CCTCCTATAAAGTTGGCATTTCCTG 59.700 44.000 0.00 0.00 35.26 3.86
825 1791 2.742589 CTGCCTAAAACTTCGGAAGACC 59.257 50.000 23.74 4.86 41.84 3.85
979 1945 2.359850 GCCCTCCGTGTCAATGCA 60.360 61.111 0.00 0.00 0.00 3.96
1089 2058 1.446272 GTCCTCCTCAAACTCCGCG 60.446 63.158 0.00 0.00 0.00 6.46
1090 2059 0.250513 ATGTCCTCCTCAAACTCCGC 59.749 55.000 0.00 0.00 0.00 5.54
1098 2067 3.083349 CGGGCCATGTCCTCCTCA 61.083 66.667 4.39 0.00 0.00 3.86
1233 2202 3.394836 GCTTCCTCGACCTGGGCT 61.395 66.667 0.00 0.00 0.00 5.19
1238 2207 4.377760 TCCCGGCTTCCTCGACCT 62.378 66.667 0.00 0.00 0.00 3.85
1587 2560 2.299867 TGCTGGAAATTTTCTTGCCTCC 59.700 45.455 17.42 0.00 0.00 4.30
1606 2579 0.109342 CATAGAGGGTCCCCATGTGC 59.891 60.000 3.51 0.00 38.92 4.57
1611 2584 0.105142 GGCTACATAGAGGGTCCCCA 60.105 60.000 3.51 0.00 38.92 4.96
1651 2624 7.284919 ACACAACCCGAAGAAAATAAATCTT 57.715 32.000 0.00 0.00 39.76 2.40
1652 2625 6.894339 ACACAACCCGAAGAAAATAAATCT 57.106 33.333 0.00 0.00 0.00 2.40
1658 2631 6.459670 ACTTTAACACAACCCGAAGAAAAT 57.540 33.333 0.00 0.00 0.00 1.82
1698 2671 1.070758 TCTTCCCTCTCGCCATATTGC 59.929 52.381 0.00 0.00 0.00 3.56
1750 2723 2.806244 CCAGTTGTACTTTTCCGTCCTG 59.194 50.000 0.00 0.00 0.00 3.86
1756 2729 3.219281 TCCAAGCCAGTTGTACTTTTCC 58.781 45.455 0.00 0.00 33.87 3.13
1760 2733 2.301870 TCGATCCAAGCCAGTTGTACTT 59.698 45.455 0.00 0.00 33.87 2.24
1761 2734 1.899814 TCGATCCAAGCCAGTTGTACT 59.100 47.619 0.00 0.00 33.87 2.73
1762 2735 2.380084 TCGATCCAAGCCAGTTGTAC 57.620 50.000 0.00 0.00 33.87 2.90
1763 2736 2.301870 AGTTCGATCCAAGCCAGTTGTA 59.698 45.455 0.00 0.00 33.87 2.41
1764 2737 1.072331 AGTTCGATCCAAGCCAGTTGT 59.928 47.619 0.00 0.00 33.87 3.32
1765 2738 1.466167 CAGTTCGATCCAAGCCAGTTG 59.534 52.381 0.00 0.00 35.71 3.16
1766 2739 1.347707 TCAGTTCGATCCAAGCCAGTT 59.652 47.619 0.00 0.00 0.00 3.16
1767 2740 0.976641 TCAGTTCGATCCAAGCCAGT 59.023 50.000 0.00 0.00 0.00 4.00
1768 2741 1.338105 TGTCAGTTCGATCCAAGCCAG 60.338 52.381 0.00 0.00 0.00 4.85
1769 2742 0.684535 TGTCAGTTCGATCCAAGCCA 59.315 50.000 0.00 0.00 0.00 4.75
1770 2743 1.079503 GTGTCAGTTCGATCCAAGCC 58.920 55.000 0.00 0.00 0.00 4.35
1771 2744 1.728971 CTGTGTCAGTTCGATCCAAGC 59.271 52.381 0.00 0.00 0.00 4.01
1772 2745 3.303881 TCTGTGTCAGTTCGATCCAAG 57.696 47.619 0.00 0.00 32.61 3.61
1773 2746 3.849911 GATCTGTGTCAGTTCGATCCAA 58.150 45.455 0.00 0.00 32.61 3.53
1774 2747 3.510388 GATCTGTGTCAGTTCGATCCA 57.490 47.619 0.00 0.00 32.61 3.41
1780 2753 2.600731 CCTGTCGATCTGTGTCAGTTC 58.399 52.381 0.00 0.00 32.61 3.01
1781 2754 1.273606 CCCTGTCGATCTGTGTCAGTT 59.726 52.381 0.00 0.00 32.61 3.16
1782 2755 0.891373 CCCTGTCGATCTGTGTCAGT 59.109 55.000 0.00 0.00 32.61 3.41
1783 2756 0.174389 CCCCTGTCGATCTGTGTCAG 59.826 60.000 0.00 0.00 0.00 3.51
1784 2757 1.257750 CCCCCTGTCGATCTGTGTCA 61.258 60.000 0.00 0.00 0.00 3.58
1785 2758 1.517832 CCCCCTGTCGATCTGTGTC 59.482 63.158 0.00 0.00 0.00 3.67
1786 2759 2.660064 GCCCCCTGTCGATCTGTGT 61.660 63.158 0.00 0.00 0.00 3.72
1787 2760 2.187946 GCCCCCTGTCGATCTGTG 59.812 66.667 0.00 0.00 0.00 3.66
1788 2761 3.083997 GGCCCCCTGTCGATCTGT 61.084 66.667 0.00 0.00 0.00 3.41
1789 2762 4.227134 CGGCCCCCTGTCGATCTG 62.227 72.222 0.00 0.00 0.00 2.90
2001 2974 4.155462 CGGCTTAAGTTTAAGGAAAGGGTC 59.845 45.833 12.23 0.00 40.31 4.46
2002 2975 4.077108 CGGCTTAAGTTTAAGGAAAGGGT 58.923 43.478 12.23 0.00 40.31 4.34
2003 2976 3.442625 CCGGCTTAAGTTTAAGGAAAGGG 59.557 47.826 12.23 0.00 40.31 3.95
2004 2977 4.329392 TCCGGCTTAAGTTTAAGGAAAGG 58.671 43.478 12.23 0.00 40.31 3.11
2005 2978 7.803279 ATATCCGGCTTAAGTTTAAGGAAAG 57.197 36.000 12.23 0.00 40.31 2.62
2006 2979 9.112725 GTTATATCCGGCTTAAGTTTAAGGAAA 57.887 33.333 12.23 0.00 40.31 3.13
2007 2980 7.716560 GGTTATATCCGGCTTAAGTTTAAGGAA 59.283 37.037 12.23 0.00 40.31 3.36
2008 2981 7.219322 GGTTATATCCGGCTTAAGTTTAAGGA 58.781 38.462 12.23 6.66 40.31 3.36
2009 2982 6.429078 GGGTTATATCCGGCTTAAGTTTAAGG 59.571 42.308 12.23 1.47 40.31 2.69
2010 2983 6.429078 GGGGTTATATCCGGCTTAAGTTTAAG 59.571 42.308 4.02 7.17 42.30 1.85
2011 2984 6.298361 GGGGTTATATCCGGCTTAAGTTTAA 58.702 40.000 4.02 0.00 0.00 1.52
2012 2985 5.511202 CGGGGTTATATCCGGCTTAAGTTTA 60.511 44.000 4.02 0.00 42.32 2.01
2013 2986 4.722220 GGGGTTATATCCGGCTTAAGTTT 58.278 43.478 4.02 0.00 0.00 2.66
2014 2987 3.244318 CGGGGTTATATCCGGCTTAAGTT 60.244 47.826 4.02 0.00 42.32 2.66
2015 2988 2.301009 CGGGGTTATATCCGGCTTAAGT 59.699 50.000 4.02 0.00 42.32 2.24
2016 2989 2.968675 CGGGGTTATATCCGGCTTAAG 58.031 52.381 0.00 0.00 42.32 1.85
2023 2996 0.961019 TCGAACCGGGGTTATATCCG 59.039 55.000 6.32 2.86 45.29 4.18
2024 2997 3.181462 ACTTTCGAACCGGGGTTATATCC 60.181 47.826 6.32 0.00 38.60 2.59
2025 2998 4.063998 ACTTTCGAACCGGGGTTATATC 57.936 45.455 6.32 0.00 38.60 1.63
2026 2999 5.813513 ATACTTTCGAACCGGGGTTATAT 57.186 39.130 6.32 0.00 38.60 0.86
2027 3000 5.612725 AATACTTTCGAACCGGGGTTATA 57.387 39.130 6.32 0.00 38.60 0.98
2028 3001 4.492494 AATACTTTCGAACCGGGGTTAT 57.508 40.909 6.32 0.00 38.60 1.89
2029 3002 3.979101 AATACTTTCGAACCGGGGTTA 57.021 42.857 6.32 0.00 38.60 2.85
2030 3003 2.865119 AATACTTTCGAACCGGGGTT 57.135 45.000 6.32 2.01 41.54 4.11
2031 3004 2.865119 AAATACTTTCGAACCGGGGT 57.135 45.000 6.32 0.00 0.00 4.95
2032 3005 3.624410 CCTAAAATACTTTCGAACCGGGG 59.376 47.826 6.32 0.00 0.00 5.73
2033 3006 4.506758 TCCTAAAATACTTTCGAACCGGG 58.493 43.478 6.32 0.00 0.00 5.73
2034 3007 6.018994 CAGATCCTAAAATACTTTCGAACCGG 60.019 42.308 0.00 0.00 0.00 5.28
2035 3008 6.755141 TCAGATCCTAAAATACTTTCGAACCG 59.245 38.462 0.00 0.00 0.00 4.44
2036 3009 7.011202 GGTCAGATCCTAAAATACTTTCGAACC 59.989 40.741 0.00 0.00 0.00 3.62
2037 3010 7.011202 GGGTCAGATCCTAAAATACTTTCGAAC 59.989 40.741 0.00 0.00 0.00 3.95
2038 3011 7.046033 GGGTCAGATCCTAAAATACTTTCGAA 58.954 38.462 0.00 0.00 0.00 3.71
2039 3012 6.383147 AGGGTCAGATCCTAAAATACTTTCGA 59.617 38.462 0.00 0.00 31.86 3.71
2040 3013 6.583562 AGGGTCAGATCCTAAAATACTTTCG 58.416 40.000 0.00 0.00 31.86 3.46
2041 3014 8.809468 AAAGGGTCAGATCCTAAAATACTTTC 57.191 34.615 1.34 0.00 33.58 2.62
2042 3015 9.601810 AAAAAGGGTCAGATCCTAAAATACTTT 57.398 29.630 1.34 0.00 33.58 2.66
2043 3016 9.244292 GAAAAAGGGTCAGATCCTAAAATACTT 57.756 33.333 1.34 0.00 33.58 2.24
2044 3017 8.615705 AGAAAAAGGGTCAGATCCTAAAATACT 58.384 33.333 1.34 0.00 33.58 2.12
2045 3018 8.809468 AGAAAAAGGGTCAGATCCTAAAATAC 57.191 34.615 1.34 0.00 33.58 1.89
2046 3019 9.901172 GTAGAAAAAGGGTCAGATCCTAAAATA 57.099 33.333 1.34 0.00 33.58 1.40
2047 3020 7.834681 GGTAGAAAAAGGGTCAGATCCTAAAAT 59.165 37.037 1.34 0.00 33.58 1.82
2048 3021 7.173032 GGTAGAAAAAGGGTCAGATCCTAAAA 58.827 38.462 1.34 0.00 33.58 1.52
2049 3022 6.575649 CGGTAGAAAAAGGGTCAGATCCTAAA 60.576 42.308 1.34 0.00 33.58 1.85
2050 3023 5.105064 CGGTAGAAAAAGGGTCAGATCCTAA 60.105 44.000 1.34 0.00 33.58 2.69
2051 3024 4.404715 CGGTAGAAAAAGGGTCAGATCCTA 59.595 45.833 1.34 0.00 33.58 2.94
2052 3025 3.197983 CGGTAGAAAAAGGGTCAGATCCT 59.802 47.826 0.00 0.00 35.88 3.24
2053 3026 3.197116 TCGGTAGAAAAAGGGTCAGATCC 59.803 47.826 0.00 0.00 0.00 3.36
2054 3027 4.182339 GTCGGTAGAAAAAGGGTCAGATC 58.818 47.826 0.00 0.00 0.00 2.75
2055 3028 3.581332 TGTCGGTAGAAAAAGGGTCAGAT 59.419 43.478 0.00 0.00 0.00 2.90
2056 3029 2.967201 TGTCGGTAGAAAAAGGGTCAGA 59.033 45.455 0.00 0.00 0.00 3.27
2057 3030 3.396260 TGTCGGTAGAAAAAGGGTCAG 57.604 47.619 0.00 0.00 0.00 3.51
2058 3031 3.558321 CCATGTCGGTAGAAAAAGGGTCA 60.558 47.826 0.00 0.00 0.00 4.02
2059 3032 3.007635 CCATGTCGGTAGAAAAAGGGTC 58.992 50.000 0.00 0.00 0.00 4.46
2060 3033 3.067684 CCATGTCGGTAGAAAAAGGGT 57.932 47.619 0.00 0.00 0.00 4.34
2072 3045 1.508632 AACGTCAAAGACCATGTCGG 58.491 50.000 0.00 0.00 37.67 4.79
2073 3046 2.666508 CCTAACGTCAAAGACCATGTCG 59.333 50.000 0.00 0.00 37.67 4.35
2074 3047 3.000727 CCCTAACGTCAAAGACCATGTC 58.999 50.000 0.00 0.00 0.00 3.06
2075 3048 2.370849 ACCCTAACGTCAAAGACCATGT 59.629 45.455 0.00 0.00 0.00 3.21
2076 3049 3.053831 ACCCTAACGTCAAAGACCATG 57.946 47.619 0.00 0.00 0.00 3.66
2077 3050 3.782656 AACCCTAACGTCAAAGACCAT 57.217 42.857 0.00 0.00 0.00 3.55
2078 3051 3.387374 TGTAACCCTAACGTCAAAGACCA 59.613 43.478 0.00 0.00 0.00 4.02
2079 3052 3.742882 GTGTAACCCTAACGTCAAAGACC 59.257 47.826 0.00 0.00 0.00 3.85
2080 3053 4.446719 CAGTGTAACCCTAACGTCAAAGAC 59.553 45.833 0.00 0.00 37.80 3.01
2081 3054 4.624015 CAGTGTAACCCTAACGTCAAAGA 58.376 43.478 0.00 0.00 37.80 2.52
2082 3055 3.185797 GCAGTGTAACCCTAACGTCAAAG 59.814 47.826 0.00 0.00 37.80 2.77
2083 3056 3.132925 GCAGTGTAACCCTAACGTCAAA 58.867 45.455 0.00 0.00 37.80 2.69
2084 3057 2.548493 GGCAGTGTAACCCTAACGTCAA 60.548 50.000 0.00 0.00 37.80 3.18
2085 3058 1.001181 GGCAGTGTAACCCTAACGTCA 59.999 52.381 0.00 0.00 37.80 4.35
2086 3059 1.274447 AGGCAGTGTAACCCTAACGTC 59.726 52.381 0.00 0.00 37.80 4.34
2087 3060 1.345063 AGGCAGTGTAACCCTAACGT 58.655 50.000 0.00 0.00 37.80 3.99
2088 3061 2.417787 GGTAGGCAGTGTAACCCTAACG 60.418 54.545 0.00 0.00 37.80 3.18
2089 3062 2.417787 CGGTAGGCAGTGTAACCCTAAC 60.418 54.545 0.67 0.67 35.75 2.34
2090 3063 1.826720 CGGTAGGCAGTGTAACCCTAA 59.173 52.381 0.00 0.00 37.80 2.69
2091 3064 1.477553 CGGTAGGCAGTGTAACCCTA 58.522 55.000 0.00 0.00 37.80 3.53
2092 3065 1.896122 GCGGTAGGCAGTGTAACCCT 61.896 60.000 0.00 0.00 42.87 4.34
2093 3066 1.449070 GCGGTAGGCAGTGTAACCC 60.449 63.158 0.00 0.00 42.87 4.11
2094 3067 1.449070 GGCGGTAGGCAGTGTAACC 60.449 63.158 0.00 0.00 46.16 2.85
2095 3068 4.196965 GGCGGTAGGCAGTGTAAC 57.803 61.111 0.00 0.00 46.16 2.50
2112 3085 3.685139 ATTCTACCGCCATAGACCATG 57.315 47.619 0.00 0.00 30.75 3.66
2113 3086 4.706842 AAATTCTACCGCCATAGACCAT 57.293 40.909 0.00 0.00 30.75 3.55
2114 3087 5.129815 AGTTAAATTCTACCGCCATAGACCA 59.870 40.000 0.00 0.00 30.75 4.02
2115 3088 5.465724 CAGTTAAATTCTACCGCCATAGACC 59.534 44.000 0.00 0.00 30.75 3.85
2116 3089 5.050295 GCAGTTAAATTCTACCGCCATAGAC 60.050 44.000 0.00 0.00 30.75 2.59
2117 3090 5.054477 GCAGTTAAATTCTACCGCCATAGA 58.946 41.667 0.00 0.00 0.00 1.98
2118 3091 4.084537 CGCAGTTAAATTCTACCGCCATAG 60.085 45.833 0.00 0.00 0.00 2.23
2119 3092 3.805422 CGCAGTTAAATTCTACCGCCATA 59.195 43.478 0.00 0.00 0.00 2.74
2120 3093 2.612212 CGCAGTTAAATTCTACCGCCAT 59.388 45.455 0.00 0.00 0.00 4.40
2121 3094 2.004017 CGCAGTTAAATTCTACCGCCA 58.996 47.619 0.00 0.00 0.00 5.69
2122 3095 2.004733 ACGCAGTTAAATTCTACCGCC 58.995 47.619 0.00 0.00 37.78 6.13
2132 3105 8.525206 TCATAACGATGTGATGACGCAGTTAAA 61.525 37.037 0.00 0.00 39.92 1.52
2133 3106 7.117375 TCATAACGATGTGATGACGCAGTTAA 61.117 38.462 0.00 0.00 39.92 2.01
2134 3107 5.677598 TCATAACGATGTGATGACGCAGTTA 60.678 40.000 0.00 0.00 39.92 2.24
2135 3108 4.913850 TCATAACGATGTGATGACGCAGTT 60.914 41.667 0.00 0.00 39.92 3.16
2136 3109 3.428862 TCATAACGATGTGATGACGCAGT 60.429 43.478 0.00 0.00 39.92 4.40
2137 3110 3.060940 GTCATAACGATGTGATGACGCAG 60.061 47.826 10.77 0.00 42.35 5.18
2138 3111 2.857748 GTCATAACGATGTGATGACGCA 59.142 45.455 10.77 0.00 42.35 5.24
2139 3112 3.489563 GTCATAACGATGTGATGACGC 57.510 47.619 10.77 0.00 42.35 5.19
2152 3125 8.390354 GTGGTAGGGTATTTTTAACGTCATAAC 58.610 37.037 0.00 0.00 0.00 1.89
2153 3126 7.552330 GGTGGTAGGGTATTTTTAACGTCATAA 59.448 37.037 0.00 0.00 0.00 1.90
2154 3127 7.047271 GGTGGTAGGGTATTTTTAACGTCATA 58.953 38.462 0.00 0.00 0.00 2.15
2155 3128 5.882000 GGTGGTAGGGTATTTTTAACGTCAT 59.118 40.000 0.00 0.00 0.00 3.06
2156 3129 5.221803 TGGTGGTAGGGTATTTTTAACGTCA 60.222 40.000 0.00 0.00 0.00 4.35
2157 3130 5.244755 TGGTGGTAGGGTATTTTTAACGTC 58.755 41.667 0.00 0.00 0.00 4.34
2158 3131 5.240013 TGGTGGTAGGGTATTTTTAACGT 57.760 39.130 0.00 0.00 0.00 3.99
2159 3132 5.124297 CCTTGGTGGTAGGGTATTTTTAACG 59.876 44.000 0.00 0.00 0.00 3.18
2160 3133 6.519679 CCTTGGTGGTAGGGTATTTTTAAC 57.480 41.667 0.00 0.00 0.00 2.01
2175 3148 0.179029 ACCGTCAAAGACCTTGGTGG 60.179 55.000 0.00 0.00 42.93 4.61
2176 3149 2.224209 ACTACCGTCAAAGACCTTGGTG 60.224 50.000 0.00 0.00 35.56 4.17
2177 3150 2.036862 GACTACCGTCAAAGACCTTGGT 59.963 50.000 0.00 0.00 39.98 3.67
2178 3151 2.612221 GGACTACCGTCAAAGACCTTGG 60.612 54.545 0.00 0.00 42.05 3.61
2179 3152 2.685100 GGACTACCGTCAAAGACCTTG 58.315 52.381 0.00 0.00 42.05 3.61
2192 3165 2.814336 CGGTAGGGTATAACGGACTACC 59.186 54.545 10.26 10.26 46.37 3.18
2193 3166 2.226674 GCGGTAGGGTATAACGGACTAC 59.773 54.545 0.00 0.00 34.70 2.73
2194 3167 2.504367 GCGGTAGGGTATAACGGACTA 58.496 52.381 0.00 0.00 0.00 2.59
2195 3168 1.322442 GCGGTAGGGTATAACGGACT 58.678 55.000 0.00 0.00 0.00 3.85
2196 3169 0.315251 GGCGGTAGGGTATAACGGAC 59.685 60.000 0.00 0.00 0.00 4.79
2197 3170 0.106268 TGGCGGTAGGGTATAACGGA 60.106 55.000 0.00 0.00 0.00 4.69
2198 3171 0.316204 CTGGCGGTAGGGTATAACGG 59.684 60.000 0.00 0.00 0.00 4.44
2199 3172 0.316204 CCTGGCGGTAGGGTATAACG 59.684 60.000 0.00 0.00 34.06 3.18
2200 3173 0.034476 GCCTGGCGGTAGGGTATAAC 59.966 60.000 1.35 0.00 38.32 1.89
2201 3174 0.105349 AGCCTGGCGGTAGGGTATAA 60.105 55.000 13.96 0.00 46.20 0.98
2202 3175 0.830444 CAGCCTGGCGGTAGGGTATA 60.830 60.000 13.96 0.00 46.31 1.47
2203 3176 2.140792 CAGCCTGGCGGTAGGGTAT 61.141 63.158 13.96 0.00 46.31 2.73
2204 3177 2.762459 CAGCCTGGCGGTAGGGTA 60.762 66.667 13.96 0.00 46.31 3.69
2207 3180 3.628646 AAAGCAGCCTGGCGGTAGG 62.629 63.158 19.80 6.81 40.95 3.18
2208 3181 2.045926 AAAGCAGCCTGGCGGTAG 60.046 61.111 19.80 9.53 39.27 3.18
2209 3182 2.359850 CAAAGCAGCCTGGCGGTA 60.360 61.111 19.80 0.00 39.27 4.02
2214 3187 2.359850 TACCGCAAAGCAGCCTGG 60.360 61.111 0.00 0.00 0.00 4.45
2215 3188 2.401766 CCTACCGCAAAGCAGCCTG 61.402 63.158 0.00 0.00 0.00 4.85
2216 3189 2.045926 CCTACCGCAAAGCAGCCT 60.046 61.111 0.00 0.00 0.00 4.58
2217 3190 3.134127 CCCTACCGCAAAGCAGCC 61.134 66.667 0.00 0.00 0.00 4.85
2218 3191 2.359975 ACCCTACCGCAAAGCAGC 60.360 61.111 0.00 0.00 0.00 5.25
2219 3192 1.021390 CAGACCCTACCGCAAAGCAG 61.021 60.000 0.00 0.00 0.00 4.24
2220 3193 1.003839 CAGACCCTACCGCAAAGCA 60.004 57.895 0.00 0.00 0.00 3.91
2221 3194 2.399356 GCAGACCCTACCGCAAAGC 61.399 63.158 0.00 0.00 0.00 3.51
2222 3195 1.003839 TGCAGACCCTACCGCAAAG 60.004 57.895 0.00 0.00 0.00 2.77
2223 3196 1.302192 GTGCAGACCCTACCGCAAA 60.302 57.895 0.00 0.00 35.87 3.68
2224 3197 0.901114 TAGTGCAGACCCTACCGCAA 60.901 55.000 0.00 0.00 35.87 4.85
2225 3198 0.686441 ATAGTGCAGACCCTACCGCA 60.686 55.000 0.00 0.00 0.00 5.69
2226 3199 0.249489 CATAGTGCAGACCCTACCGC 60.249 60.000 0.00 0.00 0.00 5.68
2227 3200 1.112113 ACATAGTGCAGACCCTACCG 58.888 55.000 0.00 0.00 0.00 4.02
2228 3201 3.270877 CAAACATAGTGCAGACCCTACC 58.729 50.000 0.00 0.00 0.00 3.18
2229 3202 3.270877 CCAAACATAGTGCAGACCCTAC 58.729 50.000 0.00 0.00 0.00 3.18
2230 3203 2.238646 CCCAAACATAGTGCAGACCCTA 59.761 50.000 0.00 0.00 0.00 3.53
2231 3204 1.004745 CCCAAACATAGTGCAGACCCT 59.995 52.381 0.00 0.00 0.00 4.34
2232 3205 1.271926 ACCCAAACATAGTGCAGACCC 60.272 52.381 0.00 0.00 0.00 4.46
2233 3206 2.200373 ACCCAAACATAGTGCAGACC 57.800 50.000 0.00 0.00 0.00 3.85
2234 3207 3.568007 TCAAACCCAAACATAGTGCAGAC 59.432 43.478 0.00 0.00 0.00 3.51
2235 3208 3.820467 CTCAAACCCAAACATAGTGCAGA 59.180 43.478 0.00 0.00 0.00 4.26
2236 3209 3.057315 CCTCAAACCCAAACATAGTGCAG 60.057 47.826 0.00 0.00 0.00 4.41
2237 3210 2.890311 CCTCAAACCCAAACATAGTGCA 59.110 45.455 0.00 0.00 0.00 4.57
2238 3211 2.352715 GCCTCAAACCCAAACATAGTGC 60.353 50.000 0.00 0.00 0.00 4.40
2239 3212 3.157087 AGCCTCAAACCCAAACATAGTG 58.843 45.455 0.00 0.00 0.00 2.74
2240 3213 3.525800 AGCCTCAAACCCAAACATAGT 57.474 42.857 0.00 0.00 0.00 2.12
2241 3214 3.056607 CCAAGCCTCAAACCCAAACATAG 60.057 47.826 0.00 0.00 0.00 2.23
2242 3215 2.896685 CCAAGCCTCAAACCCAAACATA 59.103 45.455 0.00 0.00 0.00 2.29
2243 3216 1.693606 CCAAGCCTCAAACCCAAACAT 59.306 47.619 0.00 0.00 0.00 2.71
2244 3217 1.118838 CCAAGCCTCAAACCCAAACA 58.881 50.000 0.00 0.00 0.00 2.83
2245 3218 1.408969 TCCAAGCCTCAAACCCAAAC 58.591 50.000 0.00 0.00 0.00 2.93
2246 3219 2.038659 CTTCCAAGCCTCAAACCCAAA 58.961 47.619 0.00 0.00 0.00 3.28
2247 3220 1.063266 ACTTCCAAGCCTCAAACCCAA 60.063 47.619 0.00 0.00 0.00 4.12
2248 3221 0.555769 ACTTCCAAGCCTCAAACCCA 59.444 50.000 0.00 0.00 0.00 4.51
2249 3222 2.579410 TACTTCCAAGCCTCAAACCC 57.421 50.000 0.00 0.00 0.00 4.11
2250 3223 3.005472 GGTTTACTTCCAAGCCTCAAACC 59.995 47.826 0.00 0.00 37.39 3.27
2251 3224 3.634910 TGGTTTACTTCCAAGCCTCAAAC 59.365 43.478 0.00 0.00 30.62 2.93
2252 3225 3.904717 TGGTTTACTTCCAAGCCTCAAA 58.095 40.909 0.00 0.00 30.62 2.69
2253 3226 3.586470 TGGTTTACTTCCAAGCCTCAA 57.414 42.857 0.00 0.00 30.62 3.02
2254 3227 3.586470 TTGGTTTACTTCCAAGCCTCA 57.414 42.857 0.00 0.00 39.62 3.86
2255 3228 3.367395 GCATTGGTTTACTTCCAAGCCTC 60.367 47.826 3.86 0.00 46.14 4.70
2256 3229 2.562738 GCATTGGTTTACTTCCAAGCCT 59.437 45.455 3.86 0.00 46.14 4.58
2257 3230 2.353704 GGCATTGGTTTACTTCCAAGCC 60.354 50.000 16.02 16.02 46.14 4.35
2258 3231 2.298729 TGGCATTGGTTTACTTCCAAGC 59.701 45.455 3.86 6.94 46.14 4.01
2259 3232 4.599047 TTGGCATTGGTTTACTTCCAAG 57.401 40.909 3.86 0.00 46.14 3.61
2260 3233 4.742138 GCTTTGGCATTGGTTTACTTCCAA 60.742 41.667 0.00 0.00 46.82 3.53
2261 3234 3.244044 GCTTTGGCATTGGTTTACTTCCA 60.244 43.478 0.00 0.00 38.54 3.53
2262 3235 3.325870 GCTTTGGCATTGGTTTACTTCC 58.674 45.455 0.00 0.00 38.54 3.46
2263 3236 2.986479 CGCTTTGGCATTGGTTTACTTC 59.014 45.455 0.00 0.00 38.60 3.01
2264 3237 2.625790 TCGCTTTGGCATTGGTTTACTT 59.374 40.909 0.00 0.00 38.60 2.24
2265 3238 2.235016 TCGCTTTGGCATTGGTTTACT 58.765 42.857 0.00 0.00 38.60 2.24
2266 3239 2.715737 TCGCTTTGGCATTGGTTTAC 57.284 45.000 0.00 0.00 38.60 2.01
2267 3240 3.088532 AGATCGCTTTGGCATTGGTTTA 58.911 40.909 0.00 0.00 38.60 2.01
2268 3241 1.895131 AGATCGCTTTGGCATTGGTTT 59.105 42.857 0.00 0.00 38.60 3.27
2269 3242 1.203052 CAGATCGCTTTGGCATTGGTT 59.797 47.619 0.00 0.00 38.60 3.67
2270 3243 0.813184 CAGATCGCTTTGGCATTGGT 59.187 50.000 0.00 0.00 38.60 3.67
2271 3244 0.101759 CCAGATCGCTTTGGCATTGG 59.898 55.000 0.00 0.00 38.60 3.16
2272 3245 1.097232 TCCAGATCGCTTTGGCATTG 58.903 50.000 0.00 0.00 38.60 2.82
2273 3246 1.098050 GTCCAGATCGCTTTGGCATT 58.902 50.000 0.00 0.00 38.60 3.56
2274 3247 0.035152 TGTCCAGATCGCTTTGGCAT 60.035 50.000 0.00 0.00 38.60 4.40
2275 3248 0.035152 ATGTCCAGATCGCTTTGGCA 60.035 50.000 0.00 0.00 38.60 4.92
2276 3249 0.379669 CATGTCCAGATCGCTTTGGC 59.620 55.000 0.00 0.00 34.38 4.52
2277 3250 1.742761 ACATGTCCAGATCGCTTTGG 58.257 50.000 0.00 0.00 35.74 3.28
2278 3251 2.286294 GCTACATGTCCAGATCGCTTTG 59.714 50.000 0.00 0.00 0.00 2.77
2279 3252 2.093500 TGCTACATGTCCAGATCGCTTT 60.093 45.455 0.00 0.00 0.00 3.51
2280 3253 1.482182 TGCTACATGTCCAGATCGCTT 59.518 47.619 0.00 0.00 0.00 4.68
2281 3254 1.114627 TGCTACATGTCCAGATCGCT 58.885 50.000 0.00 0.00 0.00 4.93
2282 3255 1.797046 CATGCTACATGTCCAGATCGC 59.203 52.381 0.00 0.00 0.00 4.58
2283 3256 3.103447 ACATGCTACATGTCCAGATCG 57.897 47.619 0.00 0.00 0.00 3.69
2284 3257 5.545588 ACATACATGCTACATGTCCAGATC 58.454 41.667 15.97 0.00 33.76 2.75
2285 3258 5.306419 AGACATACATGCTACATGTCCAGAT 59.694 40.000 15.97 2.62 46.30 2.90
2286 3259 4.651045 AGACATACATGCTACATGTCCAGA 59.349 41.667 15.97 0.26 46.30 3.86
2287 3260 4.953667 AGACATACATGCTACATGTCCAG 58.046 43.478 15.97 10.03 46.30 3.86
2288 3261 5.357742 AAGACATACATGCTACATGTCCA 57.642 39.130 15.97 0.90 46.30 4.02
2289 3262 6.238484 GGAAAAGACATACATGCTACATGTCC 60.238 42.308 15.97 5.25 46.30 4.02
2290 3263 6.316140 TGGAAAAGACATACATGCTACATGTC 59.684 38.462 15.97 16.59 45.76 3.06
2291 3264 6.179756 TGGAAAAGACATACATGCTACATGT 58.820 36.000 16.63 16.63 35.65 3.21
2292 3265 6.682423 TGGAAAAGACATACATGCTACATG 57.318 37.500 6.03 6.03 0.00 3.21
2293 3266 7.886629 AATGGAAAAGACATACATGCTACAT 57.113 32.000 0.00 0.00 0.00 2.29
2294 3267 8.046708 AGTAATGGAAAAGACATACATGCTACA 58.953 33.333 0.00 0.00 0.00 2.74
2295 3268 8.438676 AGTAATGGAAAAGACATACATGCTAC 57.561 34.615 0.00 0.00 0.00 3.58
2296 3269 9.764363 CTAGTAATGGAAAAGACATACATGCTA 57.236 33.333 0.00 0.00 0.00 3.49
2297 3270 8.486210 TCTAGTAATGGAAAAGACATACATGCT 58.514 33.333 0.00 0.00 0.00 3.79
2298 3271 8.662781 TCTAGTAATGGAAAAGACATACATGC 57.337 34.615 0.00 0.00 0.00 4.06
2300 3273 9.698309 CGATCTAGTAATGGAAAAGACATACAT 57.302 33.333 0.00 0.00 0.00 2.29
2301 3274 8.141909 CCGATCTAGTAATGGAAAAGACATACA 58.858 37.037 0.00 0.00 0.00 2.29
2302 3275 7.116519 GCCGATCTAGTAATGGAAAAGACATAC 59.883 40.741 0.00 0.00 0.00 2.39
2303 3276 7.152645 GCCGATCTAGTAATGGAAAAGACATA 58.847 38.462 0.00 0.00 0.00 2.29
2304 3277 5.992217 GCCGATCTAGTAATGGAAAAGACAT 59.008 40.000 0.00 0.00 0.00 3.06
2305 3278 5.105106 TGCCGATCTAGTAATGGAAAAGACA 60.105 40.000 0.00 0.00 0.00 3.41
2306 3279 5.357257 TGCCGATCTAGTAATGGAAAAGAC 58.643 41.667 0.00 0.00 0.00 3.01
2307 3280 5.607939 TGCCGATCTAGTAATGGAAAAGA 57.392 39.130 0.00 0.00 0.00 2.52
2308 3281 5.276868 CGTTGCCGATCTAGTAATGGAAAAG 60.277 44.000 0.00 0.00 35.63 2.27
2309 3282 4.569162 CGTTGCCGATCTAGTAATGGAAAA 59.431 41.667 0.00 0.00 35.63 2.29
2310 3283 4.116961 CGTTGCCGATCTAGTAATGGAAA 58.883 43.478 0.00 0.00 35.63 3.13
2311 3284 3.713288 CGTTGCCGATCTAGTAATGGAA 58.287 45.455 0.00 0.00 35.63 3.53
2312 3285 2.545113 GCGTTGCCGATCTAGTAATGGA 60.545 50.000 0.00 0.00 35.63 3.41
2313 3286 1.792949 GCGTTGCCGATCTAGTAATGG 59.207 52.381 0.00 0.00 35.63 3.16
2314 3287 1.452025 CGCGTTGCCGATCTAGTAATG 59.548 52.381 0.00 0.00 35.63 1.90
2315 3288 1.767289 CGCGTTGCCGATCTAGTAAT 58.233 50.000 0.00 0.00 35.63 1.89
2316 3289 0.868602 GCGCGTTGCCGATCTAGTAA 60.869 55.000 8.43 0.00 37.76 2.24
2317 3290 1.298863 GCGCGTTGCCGATCTAGTA 60.299 57.895 8.43 0.00 37.76 1.82
2318 3291 2.582498 GCGCGTTGCCGATCTAGT 60.582 61.111 8.43 0.00 37.76 2.57
2343 3316 3.072468 TTAGGACCGGCACCCTCG 61.072 66.667 13.19 0.00 34.11 4.63
2344 3317 2.582978 GTTAGGACCGGCACCCTC 59.417 66.667 13.19 0.00 34.11 4.30
2345 3318 3.387947 CGTTAGGACCGGCACCCT 61.388 66.667 14.11 14.11 36.60 4.34
2346 3319 1.394266 TATCGTTAGGACCGGCACCC 61.394 60.000 13.65 7.28 0.00 4.61
2347 3320 0.677842 ATATCGTTAGGACCGGCACC 59.322 55.000 0.00 5.62 0.00 5.01
2348 3321 1.604693 CCATATCGTTAGGACCGGCAC 60.605 57.143 0.00 0.00 0.00 5.01
2349 3322 0.677288 CCATATCGTTAGGACCGGCA 59.323 55.000 0.00 0.00 0.00 5.69
2350 3323 0.677842 ACCATATCGTTAGGACCGGC 59.322 55.000 0.00 0.00 0.00 6.13
2351 3324 1.958579 TGACCATATCGTTAGGACCGG 59.041 52.381 0.00 0.00 0.00 5.28
2352 3325 3.639538 CTTGACCATATCGTTAGGACCG 58.360 50.000 0.00 0.00 0.00 4.79
2353 3326 3.391049 GCTTGACCATATCGTTAGGACC 58.609 50.000 0.00 0.00 0.00 4.46
2354 3327 3.391049 GGCTTGACCATATCGTTAGGAC 58.609 50.000 0.00 0.00 38.86 3.85
2355 3328 2.035449 CGGCTTGACCATATCGTTAGGA 59.965 50.000 0.00 0.00 39.03 2.94
2356 3329 2.223971 ACGGCTTGACCATATCGTTAGG 60.224 50.000 0.00 0.00 39.03 2.69
2357 3330 2.794910 CACGGCTTGACCATATCGTTAG 59.205 50.000 0.00 0.00 39.03 2.34
2358 3331 2.482316 CCACGGCTTGACCATATCGTTA 60.482 50.000 0.00 0.00 39.03 3.18
2359 3332 1.651987 CACGGCTTGACCATATCGTT 58.348 50.000 0.00 0.00 39.03 3.85
2360 3333 0.179084 CCACGGCTTGACCATATCGT 60.179 55.000 0.00 0.00 39.03 3.73
2361 3334 0.104120 TCCACGGCTTGACCATATCG 59.896 55.000 0.00 0.00 39.03 2.92
2362 3335 2.158957 TCTTCCACGGCTTGACCATATC 60.159 50.000 0.00 0.00 39.03 1.63
2363 3336 1.837439 TCTTCCACGGCTTGACCATAT 59.163 47.619 0.00 0.00 39.03 1.78
2364 3337 1.271856 TCTTCCACGGCTTGACCATA 58.728 50.000 0.00 0.00 39.03 2.74
2365 3338 0.620556 ATCTTCCACGGCTTGACCAT 59.379 50.000 0.00 0.00 39.03 3.55
2366 3339 0.036388 GATCTTCCACGGCTTGACCA 60.036 55.000 0.00 0.00 39.03 4.02
2367 3340 0.036388 TGATCTTCCACGGCTTGACC 60.036 55.000 0.00 0.00 0.00 4.02
2368 3341 1.734465 CTTGATCTTCCACGGCTTGAC 59.266 52.381 0.00 0.00 0.00 3.18
2369 3342 1.945819 GCTTGATCTTCCACGGCTTGA 60.946 52.381 0.00 0.00 0.00 3.02
2370 3343 0.449388 GCTTGATCTTCCACGGCTTG 59.551 55.000 0.00 0.00 0.00 4.01
2371 3344 1.021390 CGCTTGATCTTCCACGGCTT 61.021 55.000 0.00 0.00 0.00 4.35
2372 3345 1.448540 CGCTTGATCTTCCACGGCT 60.449 57.895 0.00 0.00 0.00 5.52
2373 3346 2.464459 CCGCTTGATCTTCCACGGC 61.464 63.158 0.00 0.00 33.46 5.68
2374 3347 2.464459 GCCGCTTGATCTTCCACGG 61.464 63.158 8.28 8.28 43.37 4.94
2375 3348 1.091771 ATGCCGCTTGATCTTCCACG 61.092 55.000 0.00 0.00 0.00 4.94
2376 3349 0.379669 CATGCCGCTTGATCTTCCAC 59.620 55.000 0.00 0.00 0.00 4.02
2377 3350 0.252761 TCATGCCGCTTGATCTTCCA 59.747 50.000 4.89 0.00 0.00 3.53
2378 3351 1.266175 CATCATGCCGCTTGATCTTCC 59.734 52.381 16.69 0.00 31.50 3.46
2379 3352 1.334779 GCATCATGCCGCTTGATCTTC 60.335 52.381 16.69 7.53 37.42 2.87
2380 3353 0.666913 GCATCATGCCGCTTGATCTT 59.333 50.000 16.69 0.00 37.42 2.40
2381 3354 0.464916 TGCATCATGCCGCTTGATCT 60.465 50.000 16.69 0.00 44.23 2.75
2382 3355 0.596577 ATGCATCATGCCGCTTGATC 59.403 50.000 16.69 12.61 44.23 2.92
2383 3356 1.037493 AATGCATCATGCCGCTTGAT 58.963 45.000 14.40 14.40 44.23 2.57
2384 3357 1.605232 CTAATGCATCATGCCGCTTGA 59.395 47.619 7.30 11.05 44.23 3.02
2385 3358 1.335810 ACTAATGCATCATGCCGCTTG 59.664 47.619 7.30 0.00 44.23 4.01
2386 3359 1.683943 ACTAATGCATCATGCCGCTT 58.316 45.000 7.30 0.76 44.23 4.68
2387 3360 2.549064 TACTAATGCATCATGCCGCT 57.451 45.000 7.30 0.00 44.23 5.52
2388 3361 2.743664 TCATACTAATGCATCATGCCGC 59.256 45.455 7.30 0.00 44.23 6.53
2389 3362 4.142752 CCTTCATACTAATGCATCATGCCG 60.143 45.833 7.30 0.00 44.23 5.69
2390 3363 4.380233 GCCTTCATACTAATGCATCATGCC 60.380 45.833 7.30 0.00 44.23 4.40
2391 3364 4.216902 TGCCTTCATACTAATGCATCATGC 59.783 41.667 1.35 1.35 45.29 4.06
2392 3365 5.952526 TGCCTTCATACTAATGCATCATG 57.047 39.130 0.00 2.02 32.76 3.07
2393 3366 6.964807 TTTGCCTTCATACTAATGCATCAT 57.035 33.333 0.00 0.00 31.43 2.45
2394 3367 6.964807 ATTTGCCTTCATACTAATGCATCA 57.035 33.333 0.00 0.00 31.43 3.07
2395 3368 9.403110 CTAAATTTGCCTTCATACTAATGCATC 57.597 33.333 0.00 0.00 31.43 3.91
2396 3369 7.869429 GCTAAATTTGCCTTCATACTAATGCAT 59.131 33.333 0.00 0.00 31.43 3.96
2397 3370 7.147932 TGCTAAATTTGCCTTCATACTAATGCA 60.148 33.333 0.00 0.00 32.76 3.96
2398 3371 7.202526 TGCTAAATTTGCCTTCATACTAATGC 58.797 34.615 0.00 0.00 32.76 3.56
2402 3375 9.573166 ACATATGCTAAATTTGCCTTCATACTA 57.427 29.630 1.58 0.00 0.00 1.82
2403 3376 8.469309 ACATATGCTAAATTTGCCTTCATACT 57.531 30.769 1.58 0.00 0.00 2.12
2406 3379 8.694540 TGTTACATATGCTAAATTTGCCTTCAT 58.305 29.630 1.58 0.26 0.00 2.57
2407 3380 8.060931 TGTTACATATGCTAAATTTGCCTTCA 57.939 30.769 1.58 0.00 0.00 3.02
2408 3381 7.649306 CCTGTTACATATGCTAAATTTGCCTTC 59.351 37.037 1.58 0.00 0.00 3.46
2409 3382 7.341769 TCCTGTTACATATGCTAAATTTGCCTT 59.658 33.333 1.58 0.00 0.00 4.35
2410 3383 6.833416 TCCTGTTACATATGCTAAATTTGCCT 59.167 34.615 1.58 0.00 0.00 4.75
2411 3384 6.918022 GTCCTGTTACATATGCTAAATTTGCC 59.082 38.462 1.58 0.00 0.00 4.52
2412 3385 7.479980 TGTCCTGTTACATATGCTAAATTTGC 58.520 34.615 1.58 3.44 0.00 3.68
2413 3386 9.289303 GTTGTCCTGTTACATATGCTAAATTTG 57.711 33.333 1.58 0.00 0.00 2.32
2414 3387 8.466798 GGTTGTCCTGTTACATATGCTAAATTT 58.533 33.333 1.58 0.00 0.00 1.82
2415 3388 7.613801 TGGTTGTCCTGTTACATATGCTAAATT 59.386 33.333 1.58 0.00 34.23 1.82
2416 3389 7.116075 TGGTTGTCCTGTTACATATGCTAAAT 58.884 34.615 1.58 0.00 34.23 1.40
2417 3390 6.477253 TGGTTGTCCTGTTACATATGCTAAA 58.523 36.000 1.58 0.00 34.23 1.85
2418 3391 6.056090 TGGTTGTCCTGTTACATATGCTAA 57.944 37.500 1.58 0.00 34.23 3.09
2419 3392 5.685520 TGGTTGTCCTGTTACATATGCTA 57.314 39.130 1.58 0.00 34.23 3.49
2420 3393 4.568072 TGGTTGTCCTGTTACATATGCT 57.432 40.909 1.58 0.00 34.23 3.79
2421 3394 5.835113 ATTGGTTGTCCTGTTACATATGC 57.165 39.130 1.58 0.00 34.23 3.14
2422 3395 9.734620 CAATAATTGGTTGTCCTGTTACATATG 57.265 33.333 0.00 0.00 34.23 1.78
2423 3396 9.693739 TCAATAATTGGTTGTCCTGTTACATAT 57.306 29.630 5.62 0.00 34.23 1.78
2424 3397 9.173021 CTCAATAATTGGTTGTCCTGTTACATA 57.827 33.333 5.62 0.00 34.23 2.29
2425 3398 7.669722 ACTCAATAATTGGTTGTCCTGTTACAT 59.330 33.333 5.62 0.00 34.23 2.29
2426 3399 7.001674 ACTCAATAATTGGTTGTCCTGTTACA 58.998 34.615 5.62 0.00 34.23 2.41
2427 3400 7.448748 ACTCAATAATTGGTTGTCCTGTTAC 57.551 36.000 5.62 0.00 34.23 2.50
2428 3401 7.721842 TGAACTCAATAATTGGTTGTCCTGTTA 59.278 33.333 5.62 0.00 34.23 2.41
2429 3402 6.549364 TGAACTCAATAATTGGTTGTCCTGTT 59.451 34.615 5.62 0.00 34.23 3.16
2430 3403 6.068010 TGAACTCAATAATTGGTTGTCCTGT 58.932 36.000 5.62 0.00 34.23 4.00
2431 3404 6.573664 TGAACTCAATAATTGGTTGTCCTG 57.426 37.500 5.62 0.00 34.23 3.86
2432 3405 7.309990 CCATTGAACTCAATAATTGGTTGTCCT 60.310 37.037 4.66 0.00 44.10 3.85
2433 3406 6.813152 CCATTGAACTCAATAATTGGTTGTCC 59.187 38.462 4.66 0.00 44.10 4.02
2434 3407 7.378181 ACCATTGAACTCAATAATTGGTTGTC 58.622 34.615 8.87 0.00 44.10 3.18
2435 3408 7.301868 ACCATTGAACTCAATAATTGGTTGT 57.698 32.000 8.87 0.00 44.10 3.32
2436 3409 9.357652 CTTACCATTGAACTCAATAATTGGTTG 57.642 33.333 16.61 9.42 44.10 3.77
2437 3410 9.308000 TCTTACCATTGAACTCAATAATTGGTT 57.692 29.630 16.61 5.84 44.10 3.67
2438 3411 8.877864 TCTTACCATTGAACTCAATAATTGGT 57.122 30.769 15.97 15.97 44.10 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.