AutoCloner

Multiple sequence alignment - TraesCS2D01G102500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2D01G102500	chr2D	100.000	3313	0	0	1	3313	55269114	55272426	0.000000e+00	6119
1	TraesCS2D01G102500	chr2D	96.746	461	15	0	1439	1899	534494549	534495009	0.000000e+00	769
2	TraesCS2D01G102500	chr1A	96.759	648	17	3	2662	3308	133419751	133419107	0.000000e+00	1077
3	TraesCS2D01G102500	chr2B	86.768	786	61	24	677	1426	87837962	87837184	0.000000e+00	835
4	TraesCS2D01G102500	chr2B	85.205	730	40	23	1	690	87838686	87837985	0.000000e+00	688
5	TraesCS2D01G102500	chr2B	96.063	381	12	3	1938	2315	87837114	87836734	4.700000e-173	617
6	TraesCS2D01G102500	chr2B	84.305	223	11	2	2385	2607	87835369	87835171	2.610000e-46	196
7	TraesCS2D01G102500	chr1D	97.408	463	12	0	1439	1901	19874775	19875237	0.000000e+00	789
8	TraesCS2D01G102500	chr1D	96.375	469	17	0	1439	1907	250740925	250741393	0.000000e+00	773
9	TraesCS2D01G102500	chr4D	96.567	466	16	0	1437	1902	406229833	406229368	0.000000e+00	773
10	TraesCS2D01G102500	chr4D	96.328	463	17	0	1439	1901	63076913	63077375	0.000000e+00	761
11	TraesCS2D01G102500	chr3D	96.753	462	15	0	1441	1902	579562701	579563162	0.000000e+00	771
12	TraesCS2D01G102500	chr3D	96.537	462	16	0	1441	1902	579568213	579568674	0.000000e+00	765
13	TraesCS2D01G102500	chr5D	96.170	470	17	1	1439	1907	342526146	342525677	0.000000e+00	767
14	TraesCS2D01G102500	chr5B	96.537	462	16	0	1439	1900	318173261	318172800	0.000000e+00	765

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2D01G102500	chr2D	55269114	55272426	3312	False	6119	6119	100.00000	1	3313	1	chr2D.!!$F1	3312
1	TraesCS2D01G102500	chr1A	133419107	133419751	644	True	1077	1077	96.75900	2662	3308	1	chr1A.!!$R1	646
2	TraesCS2D01G102500	chr2B	87835171	87838686	3515	True	584	835	88.08525	1	2607	4	chr2B.!!$R1	2606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
604	642	0.391661	CATGCTACCACAAGCTCGGT	60.392	55.0	7.50	7.5	43.19	4.69	F
1576	1687	0.032130	GCTAGGCGCTGCACTGTATA	59.968	55.0	7.64	0.0	35.14	1.47	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1803	1914	0.030235	GACCTTTTTGTGTGACGCCC	59.970	55.0	0.0	0.0	0.0	6.13	R
2926	4374	0.186873	GGGAGTGAATGATGGGGCAT	59.813	55.0	0.0	0.0	0.0	4.40	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
53	60	9.338291	GACATATACAATATGCGTATATACCGG	57.662	37.037	6.43	0.00	39.43	5.28
64	71	3.304257	CGTATATACCGGTGTCTGTGTCC	60.304	52.174	19.93	0.00	0.00	4.02
78	85	2.147958	TGTGTCCGCTCACCAAAATAC	58.852	47.619	5.91	0.00	37.51	1.89
82	89	1.373590	CCGCTCACCAAAATACCCGG	61.374	60.000	0.00	0.00	0.00	5.73
91	98	0.691904	AAAATACCCGGACCGACCAA	59.308	50.000	17.49	0.00	38.90	3.67
97	104	0.538118	CCCGGACCGACCAATCTTAA	59.462	55.000	17.49	0.00	38.90	1.85
99	106	2.480845	CCGGACCGACCAATCTTAATC	58.519	52.381	17.49	0.00	38.90	1.75
100	107	2.480845	CGGACCGACCAATCTTAATCC	58.519	52.381	8.64	0.00	38.90	3.01
101	108	2.805657	CGGACCGACCAATCTTAATCCC	60.806	54.545	8.64	0.00	38.90	3.85
103	110	1.493446	ACCGACCAATCTTAATCCCCC	59.507	52.381	0.00	0.00	0.00	5.40
109	125	4.380791	ACCAATCTTAATCCCCCAGTAGT	58.619	43.478	0.00	0.00	0.00	2.73
111	127	5.607171	ACCAATCTTAATCCCCCAGTAGTAG	59.393	44.000	0.00	0.00	0.00	2.57
121	137	2.945668	CCCCAGTAGTAGCAAAGCAATC	59.054	50.000	0.00	0.00	0.00	2.67
124	140	5.428253	CCCAGTAGTAGCAAAGCAATCTTA	58.572	41.667	0.00	0.00	31.02	2.10
126	142	6.543831	CCCAGTAGTAGCAAAGCAATCTTAAT	59.456	38.462	0.00	0.00	31.02	1.40
127	143	7.715249	CCCAGTAGTAGCAAAGCAATCTTAATA	59.285	37.037	0.00	0.00	31.02	0.98
128	144	9.109393	CCAGTAGTAGCAAAGCAATCTTAATAA	57.891	33.333	0.00	0.00	31.02	1.40
129	145	9.922305	CAGTAGTAGCAAAGCAATCTTAATAAC	57.078	33.333	0.00	0.00	31.02	1.89
130	146	9.110502	AGTAGTAGCAAAGCAATCTTAATAACC	57.889	33.333	0.00	0.00	31.02	2.85
131	147	7.938140	AGTAGCAAAGCAATCTTAATAACCA	57.062	32.000	0.00	0.00	31.02	3.67
132	148	8.525290	AGTAGCAAAGCAATCTTAATAACCAT	57.475	30.769	0.00	0.00	31.02	3.55
133	149	8.971073	AGTAGCAAAGCAATCTTAATAACCATT	58.029	29.630	0.00	0.00	31.02	3.16
166	182	2.661537	TGCTTCGTGTGACGCCAG	60.662	61.111	0.00	0.00	42.21	4.85
179	195	4.464262	GCCAGTACATAGGCCAGC	57.536	61.111	5.01	0.00	45.18	4.85
180	196	1.832912	GCCAGTACATAGGCCAGCT	59.167	57.895	5.01	0.00	45.18	4.24
181	197	1.048601	GCCAGTACATAGGCCAGCTA	58.951	55.000	5.01	0.00	45.18	3.32
182	198	1.416401	GCCAGTACATAGGCCAGCTAA	59.584	52.381	5.01	0.00	45.18	3.09
192	208	2.924421	AGGCCAGCTAATTAAGTGAGC	58.076	47.619	5.01	0.00	36.42	4.26
193	209	1.599542	GGCCAGCTAATTAAGTGAGCG	59.400	52.381	0.00	0.00	41.23	5.03
209	225	1.008079	GCGAGCAAAGCATATGCCC	60.008	57.895	23.96	10.20	44.91	5.36
261	277	0.681564	TGCTCGTCCTCTTCCTCCTC	60.682	60.000	0.00	0.00	0.00	3.71
263	279	1.134037	GCTCGTCCTCTTCCTCCTCTA	60.134	57.143	0.00	0.00	0.00	2.43
318	338	0.726827	CATCGAACACACAATCGGGG	59.273	55.000	0.00	0.00	39.45	5.73
320	340	1.671054	CGAACACACAATCGGGGCT	60.671	57.895	0.00	0.00	35.49	5.19
350	370	2.494445	CAGCATCCTGTCGCCGTA	59.506	61.111	0.00	0.00	34.31	4.02
351	371	1.878522	CAGCATCCTGTCGCCGTAC	60.879	63.158	0.00	0.00	34.31	3.67
352	372	2.954868	GCATCCTGTCGCCGTACG	60.955	66.667	8.69	8.69	45.62	3.67
353	373	2.488355	CATCCTGTCGCCGTACGT	59.512	61.111	15.21	0.00	44.19	3.57
354	374	1.872234	CATCCTGTCGCCGTACGTG	60.872	63.158	15.21	6.46	44.19	4.49
355	375	3.695022	ATCCTGTCGCCGTACGTGC	62.695	63.158	15.21	15.61	44.19	5.34
358	378	2.429571	TGTCGCCGTACGTGCTTC	60.430	61.111	21.03	15.29	44.19	3.86
376	396	1.099689	TCGTCTGTCGATATGGTGCA	58.900	50.000	0.00	0.00	44.01	4.57
410	430	2.169974	CTCTTGATCTTCGTCGTCGTG	58.830	52.381	1.33	0.00	38.33	4.35
445	465	3.769875	GAGCTAGCGCCACCGTACC	62.770	68.421	9.55	0.00	36.60	3.34
465	489	1.003545	CGGCTATTTGTTCCGCTCATG	60.004	52.381	0.00	0.00	36.53	3.07
526	561	3.516615	CTCCACTAGCTTAACTGCTCAC	58.483	50.000	0.00	0.00	42.97	3.51
553	588	2.153322	GCCTCGAAACGTCTCGCTC	61.153	63.158	6.37	0.00	38.73	5.03
565	603	1.447489	CTCGCTCTTCCTGCTGTGG	60.447	63.158	0.00	0.00	0.00	4.17
576	614	2.138656	CTGCTGTGGTTGCTTGCCTC	62.139	60.000	0.00	0.00	0.00	4.70
598	636	2.744202	GTCCAACTCATGCTACCACAAG	59.256	50.000	0.00	0.00	0.00	3.16
602	640	1.284657	CTCATGCTACCACAAGCTCG	58.715	55.000	0.00	0.00	43.19	5.03
604	642	0.391661	CATGCTACCACAAGCTCGGT	60.392	55.000	7.50	7.50	43.19	4.69
628	666	1.153349	GGCGTTGGAAGGGCTCTAG	60.153	63.158	0.00	0.00	36.56	2.43
675	716	0.933509	GCGCAAATAGCAGCAGCATC	60.934	55.000	0.30	0.00	46.13	3.91
690	731	3.005472	GCAGCATCAATCATGTATTGCCT	59.995	43.478	11.01	6.45	44.03	4.75
691	732	4.216902	GCAGCATCAATCATGTATTGCCTA	59.783	41.667	11.01	0.00	44.03	3.93
692	733	5.278610	GCAGCATCAATCATGTATTGCCTAA	60.279	40.000	11.01	0.00	44.03	2.69
700	778	9.812347	TCAATCATGTATTGCCTAATATTTCCT	57.188	29.630	11.01	0.00	44.03	3.36
737	815	9.010366	GTGTTTATTTTTCACTCAAGAACTCAC	57.990	33.333	0.00	0.00	0.00	3.51
740	818	5.718649	TTTTTCACTCAAGAACTCACGAG	57.281	39.130	0.00	0.00	0.00	4.18
755	833	4.284490	ACTCACGAGGATAATGCATATGGT	59.716	41.667	0.00	0.00	0.00	3.55
758	836	4.628766	CACGAGGATAATGCATATGGTCTG	59.371	45.833	0.00	0.00	0.00	3.51
764	842	2.245159	ATGCATATGGTCTGACGTGG	57.755	50.000	0.00	0.00	0.00	4.94
771	849	2.093306	TGGTCTGACGTGGCAATAAG	57.907	50.000	0.00	0.00	0.00	1.73
772	850	1.621317	TGGTCTGACGTGGCAATAAGA	59.379	47.619	0.00	0.00	0.00	2.10
786	864	5.418524	TGGCAATAAGATTGCTGTTACACAT	59.581	36.000	20.27	0.00	44.36	3.21
787	865	6.601217	TGGCAATAAGATTGCTGTTACACATA	59.399	34.615	20.27	0.00	44.36	2.29
788	866	6.912591	GGCAATAAGATTGCTGTTACACATAC	59.087	38.462	20.27	0.06	44.36	2.39
789	867	7.415095	GGCAATAAGATTGCTGTTACACATACA	60.415	37.037	20.27	0.00	44.36	2.29
790	868	7.967854	GCAATAAGATTGCTGTTACACATACAA	59.032	33.333	15.28	0.00	41.87	2.41
805	888	9.955208	TTACACATACAATAATACGAGTACAGG	57.045	33.333	0.00	0.00	0.00	4.00
818	901	2.704572	AGTACAGGACTCTGCAATTGC	58.295	47.619	23.69	23.69	44.59	3.56
836	919	1.154225	CGTGGGCATTCGCTGTTTC	60.154	57.895	0.00	0.00	38.60	2.78
842	925	2.589014	GGCATTCGCTGTTTCAAGAAG	58.411	47.619	0.00	0.00	38.60	2.85
930	1013	3.471806	GGGCGGGGAGGAGAGTTC	61.472	72.222	0.00	0.00	0.00	3.01
969	1052	3.552384	AACGCGTGGGACCTGGAA	61.552	61.111	14.98	0.00	0.00	3.53
982	1065	0.462759	CCTGGAACTGAAGCCCGATC	60.463	60.000	0.00	0.00	0.00	3.69
1009	1092	2.880879	CGTCGGTCATGTGGCTCG	60.881	66.667	0.00	0.00	0.00	5.03
1051	1134	1.070445	TGTCGGGTTTCATGGTACGTT	59.930	47.619	0.00	0.00	0.00	3.99
1053	1136	1.081094	CGGGTTTCATGGTACGTTCC	58.919	55.000	3.92	3.92	0.00	3.62
1055	1138	2.081462	GGGTTTCATGGTACGTTCCTG	58.919	52.381	12.78	8.27	0.00	3.86
1057	1140	2.423577	GTTTCATGGTACGTTCCTGCT	58.576	47.619	12.78	0.00	0.00	4.24
1059	1142	2.380084	TCATGGTACGTTCCTGCTTC	57.620	50.000	12.78	0.00	0.00	3.86
1060	1143	1.621317	TCATGGTACGTTCCTGCTTCA	59.379	47.619	12.78	0.00	0.00	3.02
1062	1145	0.753867	TGGTACGTTCCTGCTTCACA	59.246	50.000	12.78	0.00	0.00	3.58
1063	1146	1.346395	TGGTACGTTCCTGCTTCACAT	59.654	47.619	12.78	0.00	0.00	3.21
1065	1148	2.000447	GTACGTTCCTGCTTCACATCC	59.000	52.381	0.00	0.00	0.00	3.51
1066	1149	0.321653	ACGTTCCTGCTTCACATCCC	60.322	55.000	0.00	0.00	0.00	3.85
1067	1150	0.036010	CGTTCCTGCTTCACATCCCT	60.036	55.000	0.00	0.00	0.00	4.20
1074	1167	2.101249	CTGCTTCACATCCCTCTCTCTC	59.899	54.545	0.00	0.00	0.00	3.20
1088	1181	4.580167	CCTCTCTCTCTCTAATCACCACAG	59.420	50.000	0.00	0.00	0.00	3.66
1089	1182	4.531854	TCTCTCTCTCTAATCACCACAGG	58.468	47.826	0.00	0.00	0.00	4.00
1091	1184	5.103728	TCTCTCTCTCTAATCACCACAGGAT	60.104	44.000	0.00	0.00	0.00	3.24
1092	1185	5.136828	TCTCTCTCTAATCACCACAGGATC	58.863	45.833	0.00	0.00	0.00	3.36
1093	1186	4.219115	TCTCTCTAATCACCACAGGATCC	58.781	47.826	2.48	2.48	0.00	3.36
1152	1252	1.334992	CGAGCAGTACAACGACACCG	61.335	60.000	0.00	0.00	42.50	4.94
1154	1254	0.601558	AGCAGTACAACGACACCGAT	59.398	50.000	0.00	0.00	39.50	4.18
1169	1269	2.604914	CACCGATCTCCATTTCTTCGTG	59.395	50.000	0.00	0.00	0.00	4.35
1201	1304	4.325304	TGCGTGCGTGCACCATTG	62.325	61.111	18.51	6.34	43.49	2.82
1206	1309	1.529622	CGTGCGTGCACCATTGATAAG	60.530	52.381	18.51	0.00	43.49	1.73
1214	1317	1.019673	ACCATTGATAAGCTGCGCAG	58.980	50.000	32.83	32.83	0.00	5.18
1229	1332	0.741221	CGCAGCTAAACCAGGAGGAC	60.741	60.000	0.00	0.00	38.69	3.85
1234	1337	1.823610	GCTAAACCAGGAGGACTACGT	59.176	52.381	0.00	0.00	38.69	3.57
1235	1338	2.416972	GCTAAACCAGGAGGACTACGTG	60.417	54.545	0.00	0.00	38.69	4.49
1236	1339	0.320697	AAACCAGGAGGACTACGTGC	59.679	55.000	0.00	0.00	38.69	5.34
1237	1340	0.542232	AACCAGGAGGACTACGTGCT	60.542	55.000	0.00	0.00	36.81	4.40
1238	1341	1.251527	ACCAGGAGGACTACGTGCTG	61.252	60.000	0.00	0.00	45.26	4.41
1241	1344	1.107114	AGGAGGACTACGTGCTGATG	58.893	55.000	0.00	0.00	33.56	3.07
1244	1349	0.532573	AGGACTACGTGCTGATGTGG	59.467	55.000	0.00	0.00	31.84	4.17
1247	1352	0.679505	ACTACGTGCTGATGTGGTGT	59.320	50.000	0.00	0.00	31.94	4.16
1307	1418	2.347114	CATGGACACGGACTGCCA	59.653	61.111	0.00	0.00	32.62	4.92
1400	1511	1.145803	GGCAAACAGACCGAGTACAC	58.854	55.000	0.00	0.00	0.00	2.90
1410	1521	0.179145	CCGAGTACACCGTCACCATC	60.179	60.000	0.00	0.00	0.00	3.51
1419	1530	1.553690	CCGTCACCATCCTCCAGGTT	61.554	60.000	0.00	0.00	35.52	3.50
1426	1537	0.978146	CATCCTCCAGGTTCGACCCT	60.978	60.000	0.00	0.00	39.75	4.34
1432	1543	3.363351	AGGTTCGACCCTGACGAC	58.637	61.111	0.00	0.00	39.75	4.34
1433	1544	2.126580	GGTTCGACCCTGACGACG	60.127	66.667	0.00	0.00	39.46	5.12
1438	1549	4.736896	GACCCTGACGACGGCCAC	62.737	72.222	2.24	0.00	0.00	5.01
1450	1561	2.983592	GGCCACCCGACACAAAGG	60.984	66.667	0.00	0.00	0.00	3.11
1451	1562	3.670377	GCCACCCGACACAAAGGC	61.670	66.667	0.00	0.00	34.71	4.35
1457	1568	3.276091	CGACACAAAGGCGCCACA	61.276	61.111	31.54	0.00	45.03	4.17
1458	1569	2.331451	GACACAAAGGCGCCACAC	59.669	61.111	31.54	8.57	0.00	3.82
1459	1570	2.124320	ACACAAAGGCGCCACACT	60.124	55.556	31.54	4.11	0.00	3.55
1460	1571	0.882927	GACACAAAGGCGCCACACTA	60.883	55.000	31.54	0.00	0.00	2.74
1461	1572	1.164041	ACACAAAGGCGCCACACTAC	61.164	55.000	31.54	0.00	0.00	2.73
1462	1573	1.147376	ACAAAGGCGCCACACTACA	59.853	52.632	31.54	0.00	0.00	2.74
1463	1574	0.250727	ACAAAGGCGCCACACTACAT	60.251	50.000	31.54	0.76	0.00	2.29
1464	1575	0.881118	CAAAGGCGCCACACTACATT	59.119	50.000	31.54	8.56	0.00	2.71
1465	1576	0.881118	AAAGGCGCCACACTACATTG	59.119	50.000	31.54	0.00	0.00	2.82
1466	1577	0.250727	AAGGCGCCACACTACATTGT	60.251	50.000	31.54	0.00	0.00	2.71
1467	1578	0.955428	AGGCGCCACACTACATTGTG	60.955	55.000	31.54	0.00	45.57	3.33
1468	1579	1.154225	GCGCCACACTACATTGTGC	60.154	57.895	0.00	0.00	44.79	4.57
1469	1580	1.851021	GCGCCACACTACATTGTGCA	61.851	55.000	0.00	0.00	44.79	4.57
1470	1581	0.590682	CGCCACACTACATTGTGCAA	59.409	50.000	0.00	0.00	44.79	4.08
1471	1582	1.662876	CGCCACACTACATTGTGCAAC	60.663	52.381	0.00	0.00	44.79	4.17
1472	1583	1.662876	GCCACACTACATTGTGCAACG	60.663	52.381	0.00	0.00	44.79	4.10
1473	1584	1.662876	CCACACTACATTGTGCAACGC	60.663	52.381	0.00	0.00	44.79	4.84
1474	1585	0.591170	ACACTACATTGTGCAACGCC	59.409	50.000	0.00	0.00	42.39	5.68
1475	1586	0.874390	CACTACATTGTGCAACGCCT	59.126	50.000	0.00	0.00	42.39	5.52
1476	1587	1.135972	CACTACATTGTGCAACGCCTC	60.136	52.381	0.00	0.00	42.39	4.70
1477	1588	1.155889	CTACATTGTGCAACGCCTCA	58.844	50.000	0.00	0.00	42.39	3.86
1478	1589	0.871722	TACATTGTGCAACGCCTCAC	59.128	50.000	0.00	0.00	42.39	3.51
1479	1590	1.100463	ACATTGTGCAACGCCTCACA	61.100	50.000	0.00	0.86	42.39	3.58
1480	1591	0.386352	CATTGTGCAACGCCTCACAG	60.386	55.000	0.00	0.00	43.15	3.66
1481	1592	0.534877	ATTGTGCAACGCCTCACAGA	60.535	50.000	0.00	0.00	43.15	3.41
1482	1593	0.534877	TTGTGCAACGCCTCACAGAT	60.535	50.000	0.00	0.00	43.15	2.90
1483	1594	0.320050	TGTGCAACGCCTCACAGATA	59.680	50.000	0.00	0.00	42.39	1.98
1484	1595	1.002366	GTGCAACGCCTCACAGATAG	58.998	55.000	0.00	0.00	33.63	2.08
1485	1596	0.108186	TGCAACGCCTCACAGATAGG	60.108	55.000	0.00	0.00	37.17	2.57
1491	1602	3.875838	CCTCACAGATAGGCGCTAC	57.124	57.895	7.64	0.00	0.00	3.58
1492	1603	1.032794	CCTCACAGATAGGCGCTACA	58.967	55.000	7.64	0.00	0.00	2.74
1493	1604	1.269309	CCTCACAGATAGGCGCTACAC	60.269	57.143	7.64	0.00	0.00	2.90
1517	1628	4.641645	CCAGCGTTGCACCCCAGA	62.642	66.667	0.00	0.00	0.00	3.86
1518	1629	3.357079	CAGCGTTGCACCCCAGAC	61.357	66.667	0.00	0.00	0.00	3.51
1519	1630	3.560251	AGCGTTGCACCCCAGACT	61.560	61.111	0.00	0.00	0.00	3.24
1520	1631	3.357079	GCGTTGCACCCCAGACTG	61.357	66.667	0.00	0.00	0.00	3.51
1521	1632	3.357079	CGTTGCACCCCAGACTGC	61.357	66.667	0.00	0.00	0.00	4.40
1522	1633	2.985847	GTTGCACCCCAGACTGCC	60.986	66.667	0.00	0.00	31.97	4.85
1523	1634	3.177884	TTGCACCCCAGACTGCCT	61.178	61.111	0.00	0.00	31.97	4.75
1524	1635	1.845664	TTGCACCCCAGACTGCCTA	60.846	57.895	0.00	0.00	31.97	3.93
1525	1636	1.422977	TTGCACCCCAGACTGCCTAA	61.423	55.000	0.00	0.00	31.97	2.69
1526	1637	1.378762	GCACCCCAGACTGCCTAAA	59.621	57.895	0.00	0.00	0.00	1.85
1527	1638	0.251165	GCACCCCAGACTGCCTAAAA	60.251	55.000	0.00	0.00	0.00	1.52
1528	1639	1.821666	GCACCCCAGACTGCCTAAAAA	60.822	52.381	0.00	0.00	0.00	1.94
1529	1640	2.807676	CACCCCAGACTGCCTAAAAAT	58.192	47.619	0.00	0.00	0.00	1.82
1530	1641	3.165071	CACCCCAGACTGCCTAAAAATT	58.835	45.455	0.00	0.00	0.00	1.82
1531	1642	3.056607	CACCCCAGACTGCCTAAAAATTG	60.057	47.826	0.00	0.00	0.00	2.32
1532	1643	2.094026	CCCCAGACTGCCTAAAAATTGC	60.094	50.000	0.00	0.00	0.00	3.56
1533	1644	2.827921	CCCAGACTGCCTAAAAATTGCT	59.172	45.455	0.00	0.00	0.00	3.91
1534	1645	4.016444	CCCAGACTGCCTAAAAATTGCTA	58.984	43.478	0.00	0.00	0.00	3.49
1535	1646	4.462483	CCCAGACTGCCTAAAAATTGCTAA	59.538	41.667	0.00	0.00	0.00	3.09
1536	1647	5.393461	CCCAGACTGCCTAAAAATTGCTAAG	60.393	44.000	0.00	0.00	0.00	2.18
1537	1648	5.183904	CCAGACTGCCTAAAAATTGCTAAGT	59.816	40.000	0.00	0.00	0.00	2.24
1538	1649	6.317857	CAGACTGCCTAAAAATTGCTAAGTC	58.682	40.000	0.00	0.00	31.68	3.01
1539	1650	6.003950	AGACTGCCTAAAAATTGCTAAGTCA	58.996	36.000	0.00	0.00	33.10	3.41
1540	1651	6.660949	AGACTGCCTAAAAATTGCTAAGTCAT	59.339	34.615	0.00	0.00	33.10	3.06
1541	1652	7.177392	AGACTGCCTAAAAATTGCTAAGTCATT	59.823	33.333	0.00	0.00	33.10	2.57
1542	1653	7.092716	ACTGCCTAAAAATTGCTAAGTCATTG	58.907	34.615	0.00	0.00	0.00	2.82
1543	1654	6.991938	TGCCTAAAAATTGCTAAGTCATTGT	58.008	32.000	0.00	0.00	0.00	2.71
1544	1655	6.867816	TGCCTAAAAATTGCTAAGTCATTGTG	59.132	34.615	0.00	0.00	0.00	3.33
1545	1656	6.183360	GCCTAAAAATTGCTAAGTCATTGTGC	60.183	38.462	0.00	0.00	0.00	4.57
1546	1657	6.867816	CCTAAAAATTGCTAAGTCATTGTGCA	59.132	34.615	0.00	0.00	0.00	4.57
1547	1658	6.774354	AAAAATTGCTAAGTCATTGTGCAG	57.226	33.333	0.00	0.00	33.13	4.41
1548	1659	5.710513	AAATTGCTAAGTCATTGTGCAGA	57.289	34.783	0.00	0.00	33.13	4.26
1549	1660	4.959596	ATTGCTAAGTCATTGTGCAGAG	57.040	40.909	0.00	0.00	33.13	3.35
1550	1661	2.079158	TGCTAAGTCATTGTGCAGAGC	58.921	47.619	0.00	0.00	0.00	4.09
1551	1662	2.289882	TGCTAAGTCATTGTGCAGAGCT	60.290	45.455	0.00	0.00	0.00	4.09
1552	1663	2.746362	GCTAAGTCATTGTGCAGAGCTT	59.254	45.455	0.00	0.00	0.00	3.74
1553	1664	3.181512	GCTAAGTCATTGTGCAGAGCTTC	60.182	47.826	0.00	0.00	0.00	3.86
1554	1665	2.556144	AGTCATTGTGCAGAGCTTCA	57.444	45.000	0.00	0.00	0.00	3.02
1555	1666	2.424557	AGTCATTGTGCAGAGCTTCAG	58.575	47.619	0.00	0.00	0.00	3.02
1556	1667	2.038164	AGTCATTGTGCAGAGCTTCAGA	59.962	45.455	0.00	0.00	0.00	3.27
1557	1668	2.415857	GTCATTGTGCAGAGCTTCAGAG	59.584	50.000	0.00	0.00	0.00	3.35
1574	1685	2.184322	GCTAGGCGCTGCACTGTA	59.816	61.111	7.64	0.00	35.14	2.74
1575	1686	1.227380	GCTAGGCGCTGCACTGTAT	60.227	57.895	7.64	0.00	35.14	2.29
1576	1687	0.032130	GCTAGGCGCTGCACTGTATA	59.968	55.000	7.64	0.00	35.14	1.47
1577	1688	1.932604	GCTAGGCGCTGCACTGTATAG	60.933	57.143	7.64	0.00	35.14	1.31
1578	1689	1.338337	CTAGGCGCTGCACTGTATAGT	59.662	52.381	7.64	0.00	37.75	2.12
1587	1698	2.591915	ACTGTATAGTGTGGCGCCT	58.408	52.632	29.70	9.99	35.34	5.52
1588	1699	1.771565	ACTGTATAGTGTGGCGCCTA	58.228	50.000	29.70	14.39	35.34	3.93
1589	1700	1.681793	ACTGTATAGTGTGGCGCCTAG	59.318	52.381	29.70	13.13	35.34	3.02
1590	1701	4.165507	ACTGTATAGTGTGGCGCCTAGC	62.166	54.545	29.70	17.93	39.66	3.42
1602	1713	2.416678	CCTAGCTCTCAGGCGCTG	59.583	66.667	7.64	3.67	37.05	5.18
1603	1714	2.279385	CTAGCTCTCAGGCGCTGC	60.279	66.667	7.64	2.66	37.05	5.25
1604	1715	3.070576	TAGCTCTCAGGCGCTGCA	61.071	61.111	7.64	0.00	37.05	4.41
1605	1716	3.362399	TAGCTCTCAGGCGCTGCAC	62.362	63.158	7.64	0.00	37.05	4.57
1606	1717	4.756458	GCTCTCAGGCGCTGCACT	62.756	66.667	7.64	0.00	0.00	4.40
1607	1718	2.888111	CTCTCAGGCGCTGCACTA	59.112	61.111	7.64	0.00	0.00	2.74
1608	1719	1.226916	CTCTCAGGCGCTGCACTAG	60.227	63.158	7.64	0.00	0.00	2.57
1609	1720	1.943116	CTCTCAGGCGCTGCACTAGT	61.943	60.000	7.64	0.00	0.00	2.57
1610	1721	1.808799	CTCAGGCGCTGCACTAGTG	60.809	63.158	18.93	18.93	39.95	2.74
1611	1722	2.816958	CAGGCGCTGCACTAGTGG	60.817	66.667	23.95	9.71	37.39	4.00
1612	1723	3.314331	AGGCGCTGCACTAGTGGT	61.314	61.111	23.95	0.00	37.39	4.16
1613	1724	2.358737	GGCGCTGCACTAGTGGTT	60.359	61.111	23.95	0.00	37.39	3.67
1614	1725	2.680913	GGCGCTGCACTAGTGGTTG	61.681	63.158	23.95	6.99	37.39	3.77
1615	1726	2.863153	CGCTGCACTAGTGGTTGC	59.137	61.111	23.95	10.41	33.19	4.17
1616	1727	1.960763	CGCTGCACTAGTGGTTGCA	60.961	57.895	23.95	14.47	33.19	4.08
1617	1728	1.576421	GCTGCACTAGTGGTTGCAC	59.424	57.895	23.95	6.97	32.03	4.57
1618	1729	0.886490	GCTGCACTAGTGGTTGCACT	60.886	55.000	23.95	0.00	39.08	4.40
1619	1730	1.608025	GCTGCACTAGTGGTTGCACTA	60.608	52.381	23.95	0.00	36.68	2.74
1620	1731	2.069273	CTGCACTAGTGGTTGCACTAC	58.931	52.381	23.95	4.83	36.68	2.73
1621	1732	1.414550	TGCACTAGTGGTTGCACTACA	59.585	47.619	23.95	7.41	36.68	2.74
1622	1733	2.158885	TGCACTAGTGGTTGCACTACAA	60.159	45.455	23.95	0.00	36.68	2.41
1623	1734	2.875933	GCACTAGTGGTTGCACTACAAA	59.124	45.455	23.95	0.00	40.82	2.83
1624	1735	3.314080	GCACTAGTGGTTGCACTACAAAA	59.686	43.478	23.95	0.00	40.82	2.44
1625	1736	4.023193	GCACTAGTGGTTGCACTACAAAAT	60.023	41.667	23.95	0.00	40.82	1.82
1626	1737	5.451908	CACTAGTGGTTGCACTACAAAATG	58.548	41.667	15.49	0.00	40.82	2.32
1627	1738	5.238432	CACTAGTGGTTGCACTACAAAATGA	59.762	40.000	15.49	0.00	40.82	2.57
1628	1739	5.825679	ACTAGTGGTTGCACTACAAAATGAA	59.174	36.000	0.00	0.00	40.82	2.57
1629	1740	5.186996	AGTGGTTGCACTACAAAATGAAG	57.813	39.130	0.00	0.00	40.82	3.02
1630	1741	3.735746	GTGGTTGCACTACAAAATGAAGC	59.264	43.478	0.00	0.00	40.82	3.86
1631	1742	3.382865	TGGTTGCACTACAAAATGAAGCA	59.617	39.130	0.00	0.00	40.82	3.91
1632	1743	4.142071	TGGTTGCACTACAAAATGAAGCAA	60.142	37.500	0.00	0.00	40.82	3.91
1634	1745	3.976169	TGCACTACAAAATGAAGCAACC	58.024	40.909	0.00	0.00	0.00	3.77
1635	1746	3.382865	TGCACTACAAAATGAAGCAACCA	59.617	39.130	0.00	0.00	0.00	3.67
1636	1747	3.735746	GCACTACAAAATGAAGCAACCAC	59.264	43.478	0.00	0.00	0.00	4.16
1637	1748	4.499696	GCACTACAAAATGAAGCAACCACT	60.500	41.667	0.00	0.00	0.00	4.00
1638	1749	5.278266	GCACTACAAAATGAAGCAACCACTA	60.278	40.000	0.00	0.00	0.00	2.74
1639	1750	6.373779	CACTACAAAATGAAGCAACCACTAG	58.626	40.000	0.00	0.00	0.00	2.57
1640	1751	6.017109	CACTACAAAATGAAGCAACCACTAGT	60.017	38.462	0.00	0.00	0.00	2.57
1641	1752	5.186996	ACAAAATGAAGCAACCACTAGTG	57.813	39.130	16.34	16.34	0.00	2.74
1642	1753	3.923017	AAATGAAGCAACCACTAGTGC	57.077	42.857	17.86	6.14	0.00	4.40
1643	1754	2.566833	ATGAAGCAACCACTAGTGCA	57.433	45.000	17.86	8.36	0.00	4.57
1644	1755	2.340210	TGAAGCAACCACTAGTGCAA	57.660	45.000	17.86	0.00	0.00	4.08
1645	1756	1.946768	TGAAGCAACCACTAGTGCAAC	59.053	47.619	17.86	6.35	0.00	4.17
1646	1757	0.944386	AAGCAACCACTAGTGCAACG	59.056	50.000	17.86	6.34	45.86	4.10
1647	1758	1.082104	GCAACCACTAGTGCAACGC	60.082	57.895	17.86	12.35	45.86	4.84
1648	1759	1.574428	CAACCACTAGTGCAACGCC	59.426	57.895	17.86	0.00	45.86	5.68
1649	1760	0.884704	CAACCACTAGTGCAACGCCT	60.885	55.000	17.86	0.00	45.86	5.52
1650	1761	0.682852	AACCACTAGTGCAACGCCTA	59.317	50.000	17.86	0.00	45.86	3.93
1651	1762	0.246635	ACCACTAGTGCAACGCCTAG	59.753	55.000	17.86	7.38	45.86	3.02
1652	1763	0.530744	CCACTAGTGCAACGCCTAGA	59.469	55.000	17.86	0.00	45.86	2.43
1653	1764	1.067142	CCACTAGTGCAACGCCTAGAA	60.067	52.381	17.86	0.00	45.86	2.10
1654	1765	2.263077	CACTAGTGCAACGCCTAGAAG	58.737	52.381	10.54	4.67	45.86	2.85
1655	1766	1.281899	CTAGTGCAACGCCTAGAAGC	58.718	55.000	3.56	0.00	45.86	3.86
1656	1767	0.895530	TAGTGCAACGCCTAGAAGCT	59.104	50.000	0.00	0.00	45.86	3.74
1657	1768	0.895530	AGTGCAACGCCTAGAAGCTA	59.104	50.000	0.00	0.00	45.86	3.32
1658	1769	1.134965	AGTGCAACGCCTAGAAGCTAG	60.135	52.381	0.00	0.00	45.86	3.42
1659	1770	0.175760	TGCAACGCCTAGAAGCTAGG	59.824	55.000	14.68	14.68	37.75	3.02
1674	1785	3.204597	GCTAGGCGCTACACTGTATAG	57.795	52.381	7.64	0.00	35.14	1.31
1675	1786	2.553172	GCTAGGCGCTACACTGTATAGT	59.447	50.000	7.64	0.00	34.63	2.12
1676	1787	3.609644	GCTAGGCGCTACACTGTATAGTG	60.610	52.174	17.20	17.20	46.55	2.74
1684	1795	2.591915	ACTGTATAGTGTGGCGCCT	58.408	52.632	29.70	9.99	35.34	5.52
1685	1796	1.771565	ACTGTATAGTGTGGCGCCTA	58.228	50.000	29.70	14.39	35.34	3.93
1686	1797	1.681793	ACTGTATAGTGTGGCGCCTAG	59.318	52.381	29.70	13.13	35.34	3.02
1687	1798	4.165507	ACTGTATAGTGTGGCGCCTAGC	62.166	54.545	29.70	17.93	39.66	3.42
1699	1810	2.416678	CCTAGCTCTCAGGCGCTG	59.583	66.667	7.64	3.67	37.05	5.18
1700	1811	2.279385	CTAGCTCTCAGGCGCTGC	60.279	66.667	7.64	2.66	37.05	5.25
1701	1812	3.070576	TAGCTCTCAGGCGCTGCA	61.071	61.111	7.64	0.00	37.05	4.41
1702	1813	3.362399	TAGCTCTCAGGCGCTGCAC	62.362	63.158	7.64	0.00	37.05	4.57
1704	1815	3.117171	CTCTCAGGCGCTGCACAC	61.117	66.667	7.64	0.00	0.00	3.82
1705	1816	3.586461	CTCTCAGGCGCTGCACACT	62.586	63.158	7.64	0.00	0.00	3.55
1706	1817	3.420606	CTCAGGCGCTGCACACTG	61.421	66.667	7.64	4.89	0.00	3.66
1707	1818	3.871248	CTCAGGCGCTGCACACTGA	62.871	63.158	7.64	9.54	37.61	3.41
1708	1819	3.720193	CAGGCGCTGCACACTGAC	61.720	66.667	7.64	0.00	32.86	3.51
1709	1820	3.933722	AGGCGCTGCACACTGACT	61.934	61.111	7.64	0.00	0.00	3.41
1710	1821	2.974698	GGCGCTGCACACTGACTT	60.975	61.111	7.64	0.00	0.00	3.01
1711	1822	1.667830	GGCGCTGCACACTGACTTA	60.668	57.895	7.64	0.00	0.00	2.24
1712	1823	1.630244	GGCGCTGCACACTGACTTAG	61.630	60.000	7.64	0.00	0.00	2.18
1713	1824	0.946221	GCGCTGCACACTGACTTAGT	60.946	55.000	0.00	0.00	41.36	2.24
1714	1825	1.668919	GCGCTGCACACTGACTTAGTA	60.669	52.381	0.00	0.00	37.60	1.82
1715	1826	2.672714	CGCTGCACACTGACTTAGTAA	58.327	47.619	0.00	0.00	37.60	2.24
1716	1827	3.254060	CGCTGCACACTGACTTAGTAAT	58.746	45.455	0.00	0.00	37.60	1.89
1717	1828	3.679980	CGCTGCACACTGACTTAGTAATT	59.320	43.478	0.00	0.00	37.60	1.40
1718	1829	4.152402	CGCTGCACACTGACTTAGTAATTT	59.848	41.667	0.00	0.00	37.60	1.82
1719	1830	5.334105	CGCTGCACACTGACTTAGTAATTTT	60.334	40.000	0.00	0.00	37.60	1.82
1720	1831	6.080406	GCTGCACACTGACTTAGTAATTTTC	58.920	40.000	0.00	0.00	37.60	2.29
1721	1832	6.293407	GCTGCACACTGACTTAGTAATTTTCA	60.293	38.462	0.00	0.00	37.60	2.69
1722	1833	7.189693	TGCACACTGACTTAGTAATTTTCAG	57.810	36.000	11.87	11.87	37.60	3.02
1723	1834	6.989759	TGCACACTGACTTAGTAATTTTCAGA	59.010	34.615	17.17	0.08	37.60	3.27
1724	1835	7.661437	TGCACACTGACTTAGTAATTTTCAGAT	59.339	33.333	17.17	7.26	37.60	2.90
1725	1836	8.171840	GCACACTGACTTAGTAATTTTCAGATC	58.828	37.037	17.17	0.00	37.60	2.75
1726	1837	9.208022	CACACTGACTTAGTAATTTTCAGATCA	57.792	33.333	17.17	0.00	37.60	2.92
1727	1838	9.209175	ACACTGACTTAGTAATTTTCAGATCAC	57.791	33.333	17.17	0.00	37.60	3.06
1728	1839	9.208022	CACTGACTTAGTAATTTTCAGATCACA	57.792	33.333	17.17	0.00	37.60	3.58
1729	1840	9.209175	ACTGACTTAGTAATTTTCAGATCACAC	57.791	33.333	17.17	0.00	38.04	3.82
1730	1841	8.239681	TGACTTAGTAATTTTCAGATCACACG	57.760	34.615	0.00	0.00	0.00	4.49
1731	1842	7.330946	TGACTTAGTAATTTTCAGATCACACGG	59.669	37.037	0.00	0.00	0.00	4.94
1732	1843	6.594159	ACTTAGTAATTTTCAGATCACACGGG	59.406	38.462	0.00	0.00	0.00	5.28
1733	1844	4.906618	AGTAATTTTCAGATCACACGGGT	58.093	39.130	0.00	0.00	0.00	5.28
1734	1845	4.695455	AGTAATTTTCAGATCACACGGGTG	59.305	41.667	12.84	12.84	46.66	4.61
1735	1846	1.234821	TTTTCAGATCACACGGGTGC	58.765	50.000	14.50	0.00	44.87	5.01
1736	1847	0.948623	TTTCAGATCACACGGGTGCG	60.949	55.000	14.50	1.16	44.87	5.34
1737	1848	1.811645	TTCAGATCACACGGGTGCGA	61.812	55.000	14.50	3.84	44.87	5.10
1738	1849	2.094659	CAGATCACACGGGTGCGAC	61.095	63.158	14.50	6.76	44.87	5.19
1739	1850	3.179265	GATCACACGGGTGCGACG	61.179	66.667	14.50	0.00	44.87	5.12
1752	1863	3.190849	CGACGCTGGTCAGGCATG	61.191	66.667	0.00	0.00	43.61	4.06
1753	1864	2.046892	GACGCTGGTCAGGCATGT	60.047	61.111	0.00	0.00	42.91	3.21
1754	1865	1.218047	GACGCTGGTCAGGCATGTA	59.782	57.895	0.00	0.00	42.91	2.29
1755	1866	0.807667	GACGCTGGTCAGGCATGTAG	60.808	60.000	0.00	0.00	42.91	2.74
1756	1867	2.176273	CGCTGGTCAGGCATGTAGC	61.176	63.158	12.52	12.52	44.65	3.58
1767	1878	2.869358	GCATGTAGCGCATATCTGTG	57.131	50.000	11.47	0.00	35.74	3.66
1768	1879	2.407090	GCATGTAGCGCATATCTGTGA	58.593	47.619	11.47	0.00	35.74	3.58
1769	1880	2.411069	GCATGTAGCGCATATCTGTGAG	59.589	50.000	11.47	0.00	35.74	3.51
1770	1881	2.800881	TGTAGCGCATATCTGTGAGG	57.199	50.000	11.47	0.00	34.71	3.86
1771	1882	1.269778	TGTAGCGCATATCTGTGAGGC	60.270	52.381	11.47	0.00	34.71	4.70
1773	1884	4.738198	CGCATATCTGTGAGGCGT	57.262	55.556	0.00	0.00	42.51	5.68
1774	1885	2.977700	CGCATATCTGTGAGGCGTT	58.022	52.632	0.00	0.00	42.51	4.84
1775	1886	0.578683	CGCATATCTGTGAGGCGTTG	59.421	55.000	0.00	0.00	42.51	4.10
1776	1887	0.305922	GCATATCTGTGAGGCGTTGC	59.694	55.000	0.00	0.00	0.00	4.17
1777	1888	1.655484	CATATCTGTGAGGCGTTGCA	58.345	50.000	0.00	0.00	0.00	4.08
1778	1889	1.328680	CATATCTGTGAGGCGTTGCAC	59.671	52.381	0.00	0.00	35.63	4.57
1779	1890	0.320050	TATCTGTGAGGCGTTGCACA	59.680	50.000	0.00	0.00	42.25	4.57
1781	1892	2.189257	TGTGAGGCGTTGCACAGT	59.811	55.556	0.00	0.00	39.86	3.55
1782	1893	2.179547	TGTGAGGCGTTGCACAGTG	61.180	57.895	0.00	0.00	39.86	3.66
1783	1894	2.180204	GTGAGGCGTTGCACAGTGT	61.180	57.895	1.61	0.00	35.19	3.55
1784	1895	0.878523	GTGAGGCGTTGCACAGTGTA	60.879	55.000	1.61	0.00	35.19	2.90
1785	1896	0.599991	TGAGGCGTTGCACAGTGTAG	60.600	55.000	1.61	0.00	0.00	2.74
1786	1897	0.600255	GAGGCGTTGCACAGTGTAGT	60.600	55.000	1.61	0.00	0.00	2.73
1787	1898	0.880278	AGGCGTTGCACAGTGTAGTG	60.880	55.000	1.61	0.00	42.37	2.74
1788	1899	1.157870	GGCGTTGCACAGTGTAGTGT	61.158	55.000	1.61	0.00	41.52	3.55
1790	1901	0.581529	CGTTGCACAGTGTAGTGTGG	59.418	55.000	18.52	1.81	46.73	4.17
1791	1902	0.307760	GTTGCACAGTGTAGTGTGGC	59.692	55.000	18.52	12.34	46.73	5.01
1792	1903	1.157257	TTGCACAGTGTAGTGTGGCG	61.157	55.000	18.52	0.00	46.73	5.69
1793	1904	2.954753	GCACAGTGTAGTGTGGCGC	61.955	63.158	18.52	0.00	46.73	6.53
1794	1905	2.030562	ACAGTGTAGTGTGGCGCC	59.969	61.111	22.73	22.73	0.00	6.53
1795	1906	2.343758	CAGTGTAGTGTGGCGCCT	59.656	61.111	29.70	9.99	0.00	5.52
1796	1907	1.301716	CAGTGTAGTGTGGCGCCTT	60.302	57.895	29.70	13.03	0.00	4.35
1797	1908	1.004918	AGTGTAGTGTGGCGCCTTC	60.005	57.895	29.70	20.58	0.00	3.46
1798	1909	2.048597	TGTAGTGTGGCGCCTTCG	60.049	61.111	29.70	0.00	39.07	3.79
1816	1927	2.962786	CGTCGGGCGTCACACAAA	60.963	61.111	0.00	0.00	35.54	2.83
1817	1928	2.526993	CGTCGGGCGTCACACAAAA	61.527	57.895	0.00	0.00	35.54	2.44
1818	1929	1.722677	GTCGGGCGTCACACAAAAA	59.277	52.632	0.00	0.00	0.00	1.94
1819	1930	0.316689	GTCGGGCGTCACACAAAAAG	60.317	55.000	0.00	0.00	0.00	2.27
1820	1931	1.008995	CGGGCGTCACACAAAAAGG	60.009	57.895	0.00	0.00	0.00	3.11
1821	1932	1.720694	CGGGCGTCACACAAAAAGGT	61.721	55.000	0.00	0.00	0.00	3.50
1822	1933	0.030235	GGGCGTCACACAAAAAGGTC	59.970	55.000	0.00	0.00	0.00	3.85
1823	1934	0.736053	GGCGTCACACAAAAAGGTCA	59.264	50.000	0.00	0.00	0.00	4.02
1824	1935	1.268539	GGCGTCACACAAAAAGGTCAG	60.269	52.381	0.00	0.00	0.00	3.51
1825	1936	1.859998	GCGTCACACAAAAAGGTCAGC	60.860	52.381	0.00	0.00	0.00	4.26
1826	1937	1.268539	CGTCACACAAAAAGGTCAGCC	60.269	52.381	0.00	0.00	0.00	4.85
1827	1938	1.021202	TCACACAAAAAGGTCAGCCG	58.979	50.000	0.00	0.00	40.50	5.52
1828	1939	0.594796	CACACAAAAAGGTCAGCCGC	60.595	55.000	0.00	0.00	40.50	6.53
1829	1940	1.370414	CACAAAAAGGTCAGCCGCG	60.370	57.895	0.00	0.00	40.50	6.46
1830	1941	1.822186	ACAAAAAGGTCAGCCGCGT	60.822	52.632	4.92	0.00	40.50	6.01
1831	1942	1.370414	CAAAAAGGTCAGCCGCGTG	60.370	57.895	4.92	0.00	40.50	5.34
1832	1943	1.525077	AAAAAGGTCAGCCGCGTGA	60.525	52.632	4.92	0.00	40.50	4.35
1833	1944	1.098712	AAAAAGGTCAGCCGCGTGAA	61.099	50.000	4.92	0.00	40.50	3.18
1834	1945	1.098712	AAAAGGTCAGCCGCGTGAAA	61.099	50.000	4.92	0.00	40.50	2.69
1835	1946	0.889186	AAAGGTCAGCCGCGTGAAAT	60.889	50.000	4.92	0.00	40.50	2.17
1836	1947	0.036765	AAGGTCAGCCGCGTGAAATA	60.037	50.000	4.92	0.00	40.50	1.40
1837	1948	0.460284	AGGTCAGCCGCGTGAAATAG	60.460	55.000	4.92	0.00	40.50	1.73
1838	1949	0.739813	GGTCAGCCGCGTGAAATAGT	60.740	55.000	4.92	0.00	0.00	2.12
1839	1950	1.076332	GTCAGCCGCGTGAAATAGTT	58.924	50.000	4.92	0.00	0.00	2.24
1840	1951	1.463444	GTCAGCCGCGTGAAATAGTTT	59.537	47.619	4.92	0.00	0.00	2.66
1841	1952	1.730064	TCAGCCGCGTGAAATAGTTTC	59.270	47.619	4.92	0.00	40.08	2.78
1842	1953	1.463056	CAGCCGCGTGAAATAGTTTCA	59.537	47.619	4.92	1.24	46.68	2.69
1852	1963	5.917541	TGAAATAGTTTCACGGACAGTTC	57.082	39.130	1.24	0.00	44.21	3.01
1853	1964	5.361427	TGAAATAGTTTCACGGACAGTTCA	58.639	37.500	1.24	0.00	44.21	3.18
1854	1965	5.995282	TGAAATAGTTTCACGGACAGTTCAT	59.005	36.000	1.24	0.00	44.21	2.57
1855	1966	6.485313	TGAAATAGTTTCACGGACAGTTCATT	59.515	34.615	1.24	0.00	44.21	2.57
1856	1967	6.481954	AATAGTTTCACGGACAGTTCATTC	57.518	37.500	0.00	0.00	0.00	2.67
1857	1968	4.073293	AGTTTCACGGACAGTTCATTCT	57.927	40.909	0.00	0.00	0.00	2.40
1858	1969	3.809832	AGTTTCACGGACAGTTCATTCTG	59.190	43.478	0.00	0.00	40.80	3.02
1860	1971	2.754472	TCACGGACAGTTCATTCTGTG	58.246	47.619	4.06	4.48	46.81	3.66
1862	1973	3.685139	ACGGACAGTTCATTCTGTGAT	57.315	42.857	4.06	0.00	46.81	3.06
1863	1974	4.008074	ACGGACAGTTCATTCTGTGATT	57.992	40.909	4.06	0.00	46.81	2.57
1864	1975	4.389374	ACGGACAGTTCATTCTGTGATTT	58.611	39.130	4.06	0.00	46.81	2.17
1865	1976	4.214119	ACGGACAGTTCATTCTGTGATTTG	59.786	41.667	4.06	0.00	46.81	2.32
1866	1977	4.452114	CGGACAGTTCATTCTGTGATTTGA	59.548	41.667	4.06	0.00	46.81	2.69
1867	1978	5.122869	CGGACAGTTCATTCTGTGATTTGAT	59.877	40.000	4.06	0.00	46.81	2.57
1868	1979	6.348786	CGGACAGTTCATTCTGTGATTTGATT	60.349	38.462	4.06	0.00	46.81	2.57
1869	1980	7.373493	GGACAGTTCATTCTGTGATTTGATTT	58.627	34.615	4.06	0.00	46.81	2.17
1870	1981	7.869429	GGACAGTTCATTCTGTGATTTGATTTT	59.131	33.333	4.06	0.00	46.81	1.82
1871	1982	8.583810	ACAGTTCATTCTGTGATTTGATTTTG	57.416	30.769	0.00	0.00	45.40	2.44
1872	1983	8.199449	ACAGTTCATTCTGTGATTTGATTTTGT	58.801	29.630	0.00	0.00	45.40	2.83
1873	1984	8.697067	CAGTTCATTCTGTGATTTGATTTTGTC	58.303	33.333	0.00	0.00	36.54	3.18
1874	1985	7.869429	AGTTCATTCTGTGATTTGATTTTGTCC	59.131	33.333	0.00	0.00	36.54	4.02
1875	1986	7.287512	TCATTCTGTGATTTGATTTTGTCCA	57.712	32.000	0.00	0.00	0.00	4.02
1876	1987	7.898918	TCATTCTGTGATTTGATTTTGTCCAT	58.101	30.769	0.00	0.00	0.00	3.41
1877	1988	9.022884	TCATTCTGTGATTTGATTTTGTCCATA	57.977	29.630	0.00	0.00	0.00	2.74
1878	1989	9.297586	CATTCTGTGATTTGATTTTGTCCATAG	57.702	33.333	0.00	0.00	0.00	2.23
1879	1990	7.395190	TCTGTGATTTGATTTTGTCCATAGG	57.605	36.000	0.00	0.00	0.00	2.57
1880	1991	6.947733	TCTGTGATTTGATTTTGTCCATAGGT	59.052	34.615	0.00	0.00	0.00	3.08
1881	1992	7.121168	TCTGTGATTTGATTTTGTCCATAGGTC	59.879	37.037	0.00	0.00	0.00	3.85
1882	1993	6.718912	TGTGATTTGATTTTGTCCATAGGTCA	59.281	34.615	0.00	0.00	0.00	4.02
1883	1994	7.232330	TGTGATTTGATTTTGTCCATAGGTCAA	59.768	33.333	0.00	0.00	0.00	3.18
1884	1995	8.087750	GTGATTTGATTTTGTCCATAGGTCAAA	58.912	33.333	4.70	4.70	38.50	2.69
1885	1996	8.814931	TGATTTGATTTTGTCCATAGGTCAAAT	58.185	29.630	9.41	9.41	43.48	2.32
1886	1997	9.657419	GATTTGATTTTGTCCATAGGTCAAATT	57.343	29.630	8.78	6.20	41.90	1.82
1888	1999	8.830201	TTGATTTTGTCCATAGGTCAAATTTG	57.170	30.769	12.15	12.15	39.54	2.32
1889	2000	7.961351	TGATTTTGTCCATAGGTCAAATTTGT	58.039	30.769	17.47	1.67	39.54	2.83
1890	2001	8.087750	TGATTTTGTCCATAGGTCAAATTTGTC	58.912	33.333	17.47	12.07	39.54	3.18
1891	2002	6.968263	TTTGTCCATAGGTCAAATTTGTCA	57.032	33.333	17.47	0.00	36.24	3.58
1892	2003	6.968263	TTGTCCATAGGTCAAATTTGTCAA	57.032	33.333	17.47	5.31	28.82	3.18
1893	2004	7.537596	TTGTCCATAGGTCAAATTTGTCAAT	57.462	32.000	17.47	7.25	28.82	2.57
1894	2005	7.537596	TGTCCATAGGTCAAATTTGTCAATT	57.462	32.000	17.47	5.14	33.72	2.32
1895	2006	7.961351	TGTCCATAGGTCAAATTTGTCAATTT	58.039	30.769	17.47	2.98	42.37	1.82
1896	2007	8.428063	TGTCCATAGGTCAAATTTGTCAATTTT	58.572	29.630	17.47	0.59	40.09	1.82
1897	2008	8.711457	GTCCATAGGTCAAATTTGTCAATTTTG	58.289	33.333	17.47	19.85	40.09	2.44
1898	2009	7.387397	TCCATAGGTCAAATTTGTCAATTTTGC	59.613	33.333	20.61	16.62	40.09	3.68
1899	2010	7.361116	CCATAGGTCAAATTTGTCAATTTTGCC	60.361	37.037	20.61	21.66	40.09	4.52
1900	2011	4.511082	AGGTCAAATTTGTCAATTTTGCCG	59.489	37.500	20.61	5.65	40.09	5.69
1901	2012	4.210629	GTCAAATTTGTCAATTTTGCCGC	58.789	39.130	20.61	12.95	40.09	6.53
1902	2013	4.024977	GTCAAATTTGTCAATTTTGCCGCT	60.025	37.500	20.61	0.00	40.09	5.52
1903	2014	4.025061	TCAAATTTGTCAATTTTGCCGCTG	60.025	37.500	20.61	5.13	40.09	5.18
1904	2015	1.216122	TTTGTCAATTTTGCCGCTGC	58.784	45.000	0.00	0.00	38.26	5.25
1905	2016	0.388659	TTGTCAATTTTGCCGCTGCT	59.611	45.000	0.70	0.00	38.71	4.24
1908	2019	1.068610	GTCAATTTTGCCGCTGCTGTA	60.069	47.619	0.70	0.00	38.71	2.74
1911	2022	1.247567	ATTTTGCCGCTGCTGTACTT	58.752	45.000	0.70	0.00	38.71	2.24
1913	2024	0.533978	TTTGCCGCTGCTGTACTTCA	60.534	50.000	0.70	0.00	38.71	3.02
1922	2033	2.333926	TGCTGTACTTCATTCGGTTCG	58.666	47.619	0.00	0.00	0.00	3.95
1925	2036	3.185797	GCTGTACTTCATTCGGTTCGTTT	59.814	43.478	0.00	0.00	0.00	3.60
1926	2037	4.698276	CTGTACTTCATTCGGTTCGTTTG	58.302	43.478	0.00	0.00	0.00	2.93
1927	2038	3.495377	TGTACTTCATTCGGTTCGTTTGG	59.505	43.478	0.00	0.00	0.00	3.28
1928	2039	2.567985	ACTTCATTCGGTTCGTTTGGT	58.432	42.857	0.00	0.00	0.00	3.67
1929	2040	2.289547	ACTTCATTCGGTTCGTTTGGTG	59.710	45.455	0.00	0.00	0.00	4.17
1930	2041	0.589223	TCATTCGGTTCGTTTGGTGC	59.411	50.000	0.00	0.00	0.00	5.01
1932	2043	1.001815	CATTCGGTTCGTTTGGTGCTT	60.002	47.619	0.00	0.00	0.00	3.91
1933	2044	1.096416	TTCGGTTCGTTTGGTGCTTT	58.904	45.000	0.00	0.00	0.00	3.51
1934	2045	0.378962	TCGGTTCGTTTGGTGCTTTG	59.621	50.000	0.00	0.00	0.00	2.77
1935	2046	1.206115	CGGTTCGTTTGGTGCTTTGC	61.206	55.000	0.00	0.00	0.00	3.68
1936	2047	0.874175	GGTTCGTTTGGTGCTTTGCC	60.874	55.000	0.00	0.00	0.00	4.52
1972	2101	4.035843	GTCCCTCATCGTGGACCT	57.964	61.111	0.00	0.00	44.32	3.85
2154	2286	2.586079	CCTACGTGGCCAGCATCG	60.586	66.667	5.11	9.22	0.00	3.84
2155	2287	3.264897	CTACGTGGCCAGCATCGC	61.265	66.667	5.11	0.00	0.00	4.58
2252	2384	2.230940	CGGTGCCAGCGATTACGAG	61.231	63.158	11.46	0.00	42.41	4.18
2324	3771	4.218200	TGCAACCACTAAAATGTGAGGATG	59.782	41.667	0.00	0.00	40.12	3.51
2340	3787	1.410648	GGATGGCTTCATCATGGGTGT	60.411	52.381	8.38	0.00	46.81	4.16
2341	3788	1.952296	GATGGCTTCATCATGGGTGTC	59.048	52.381	0.00	0.00	44.93	3.67
2342	3789	0.392863	TGGCTTCATCATGGGTGTCG	60.393	55.000	0.00	0.00	0.00	4.35
2343	3790	0.107703	GGCTTCATCATGGGTGTCGA	60.108	55.000	0.00	0.00	0.00	4.20
2344	3791	1.293924	GCTTCATCATGGGTGTCGAG	58.706	55.000	0.00	0.00	0.00	4.04
2345	3792	1.134699	GCTTCATCATGGGTGTCGAGA	60.135	52.381	0.00	0.00	0.00	4.04
2346	3793	2.544685	CTTCATCATGGGTGTCGAGAC	58.455	52.381	3.66	3.66	0.00	3.36
2372	3819	5.297029	CGAGACCAACAGTAGTCATCAGATA	59.703	44.000	6.46	0.00	35.38	1.98
2373	3820	6.016693	CGAGACCAACAGTAGTCATCAGATAT	60.017	42.308	6.46	0.00	35.38	1.63
2374	3821	7.048629	AGACCAACAGTAGTCATCAGATATG	57.951	40.000	6.46	0.00	35.38	1.78
2375	3822	6.836007	AGACCAACAGTAGTCATCAGATATGA	59.164	38.462	0.00	0.00	35.38	2.15
2376	3823	7.508636	AGACCAACAGTAGTCATCAGATATGAT	59.491	37.037	0.00	0.00	35.38	2.45
2377	3824	7.440198	ACCAACAGTAGTCATCAGATATGATG	58.560	38.462	21.77	21.77	45.10	3.07
2433	3880	7.549839	ACATTTTATCTAGCAAACATGCATGT	58.450	30.769	26.61	26.61	44.20	3.21
2440	3887	1.668337	GCAAACATGCATGTGCGGTTA	60.668	47.619	31.98	0.00	45.83	2.85
2454	3901	5.574082	TGTGCGGTTACAAATAATGTATGC	58.426	37.500	0.00	0.00	43.84	3.14
2455	3902	5.355630	TGTGCGGTTACAAATAATGTATGCT	59.644	36.000	0.00	0.00	43.84	3.79
2456	3903	5.907391	GTGCGGTTACAAATAATGTATGCTC	59.093	40.000	0.00	0.00	43.84	4.26
2457	3904	5.586643	TGCGGTTACAAATAATGTATGCTCA	59.413	36.000	0.00	0.00	43.84	4.26
2458	3905	6.262049	TGCGGTTACAAATAATGTATGCTCAT	59.738	34.615	0.00	0.00	43.84	2.90
2459	3906	7.442666	TGCGGTTACAAATAATGTATGCTCATA	59.557	33.333	0.00	0.00	43.84	2.15
2460	3907	7.957484	GCGGTTACAAATAATGTATGCTCATAG	59.043	37.037	0.00	0.00	43.84	2.23
2461	3908	7.957484	CGGTTACAAATAATGTATGCTCATAGC	59.043	37.037	0.00	0.00	43.84	2.97
2464	3911	7.806409	ACAAATAATGTATGCTCATAGCACA	57.194	32.000	3.29	0.00	44.51	4.57
2465	3912	8.224389	ACAAATAATGTATGCTCATAGCACAA	57.776	30.769	3.29	0.00	44.51	3.33
2466	3913	8.853126	ACAAATAATGTATGCTCATAGCACAAT	58.147	29.630	3.29	0.00	44.51	2.71
2474	3921	2.543641	CTCATAGCACAATGAGCACGA	58.456	47.619	5.34	0.00	44.63	4.35
2548	3995	7.467623	GTGTTGTTGCTTATTCTCCTTGATAG	58.532	38.462	0.00	0.00	0.00	2.08
2552	3999	6.490534	GTTGCTTATTCTCCTTGATAGCAAC	58.509	40.000	17.69	17.69	45.73	4.17
2555	4002	2.760634	TTCTCCTTGATAGCAACGCA	57.239	45.000	0.00	0.00	0.00	5.24
2575	4022	4.776743	GCATCTGAGCGTGGTTAATTATG	58.223	43.478	0.00	0.00	0.00	1.90
2585	4032	6.203530	AGCGTGGTTAATTATGTGATGATCTG	59.796	38.462	0.00	0.00	0.00	2.90
2616	4063	4.735132	GCGCACACACCCGAGCTA	62.735	66.667	0.30	0.00	0.00	3.32
2617	4064	2.507102	CGCACACACCCGAGCTAG	60.507	66.667	0.00	0.00	0.00	3.42
2618	4065	2.970639	GCACACACCCGAGCTAGA	59.029	61.111	0.00	0.00	0.00	2.43
2619	4066	1.153745	GCACACACCCGAGCTAGAG	60.154	63.158	0.00	0.00	0.00	2.43
2620	4067	1.153745	CACACACCCGAGCTAGAGC	60.154	63.158	0.00	0.00	42.49	4.09
2621	4068	2.352032	ACACACCCGAGCTAGAGCC	61.352	63.158	0.00	0.00	43.38	4.70
2622	4069	2.055042	CACACCCGAGCTAGAGCCT	61.055	63.158	0.00	0.00	43.38	4.58
2623	4070	0.752009	CACACCCGAGCTAGAGCCTA	60.752	60.000	0.00	0.00	43.38	3.93
2624	4071	0.752376	ACACCCGAGCTAGAGCCTAC	60.752	60.000	0.00	0.00	43.38	3.18
2625	4072	0.752009	CACCCGAGCTAGAGCCTACA	60.752	60.000	0.00	0.00	43.38	2.74
2626	4073	0.752376	ACCCGAGCTAGAGCCTACAC	60.752	60.000	0.00	0.00	43.38	2.90
2627	4074	1.457009	CCCGAGCTAGAGCCTACACC	61.457	65.000	0.00	0.00	43.38	4.16
2628	4075	0.466555	CCGAGCTAGAGCCTACACCT	60.467	60.000	0.00	0.00	43.38	4.00
2629	4076	1.202782	CCGAGCTAGAGCCTACACCTA	60.203	57.143	0.00	0.00	43.38	3.08
2630	4077	2.147958	CGAGCTAGAGCCTACACCTAG	58.852	57.143	0.00	0.00	43.38	3.02
2631	4078	2.485835	CGAGCTAGAGCCTACACCTAGT	60.486	54.545	0.00	0.00	43.38	2.57
2632	4079	3.143728	GAGCTAGAGCCTACACCTAGTC	58.856	54.545	0.00	0.00	43.38	2.59
2633	4080	2.158579	AGCTAGAGCCTACACCTAGTCC	60.159	54.545	0.00	0.00	43.38	3.85
2634	4081	2.423088	GCTAGAGCCTACACCTAGTCCA	60.423	54.545	0.00	0.00	34.06	4.02
2635	4082	3.752542	GCTAGAGCCTACACCTAGTCCAT	60.753	52.174	0.00	0.00	34.06	3.41
2636	4083	4.506979	GCTAGAGCCTACACCTAGTCCATA	60.507	50.000	0.00	0.00	34.06	2.74
2637	4084	4.107127	AGAGCCTACACCTAGTCCATAG	57.893	50.000	0.00	0.00	0.00	2.23
2638	4085	3.722627	AGAGCCTACACCTAGTCCATAGA	59.277	47.826	0.00	0.00	32.76	1.98
2639	4086	3.822167	GAGCCTACACCTAGTCCATAGAC	59.178	52.174	0.00	0.00	43.89	2.59
2640	4087	2.892215	GCCTACACCTAGTCCATAGACC	59.108	54.545	0.00	0.00	44.72	3.85
2641	4088	3.690438	GCCTACACCTAGTCCATAGACCA	60.690	52.174	0.00	0.00	44.72	4.02
2642	4089	4.742012	CCTACACCTAGTCCATAGACCAT	58.258	47.826	0.00	0.00	44.72	3.55
2643	4090	4.767928	CCTACACCTAGTCCATAGACCATC	59.232	50.000	0.00	0.00	44.72	3.51
2644	4091	3.577919	ACACCTAGTCCATAGACCATCC	58.422	50.000	0.00	0.00	44.72	3.51
2645	4092	2.900546	CACCTAGTCCATAGACCATCCC	59.099	54.545	0.00	0.00	44.72	3.85
2646	4093	2.798368	ACCTAGTCCATAGACCATCCCT	59.202	50.000	0.00	0.00	44.72	4.20
2647	4094	3.181416	ACCTAGTCCATAGACCATCCCTC	60.181	52.174	0.00	0.00	44.72	4.30
2648	4095	2.002505	AGTCCATAGACCATCCCTCG	57.997	55.000	0.00	0.00	44.72	4.63
2649	4096	1.218196	AGTCCATAGACCATCCCTCGT	59.782	52.381	0.00	0.00	44.72	4.18
2650	4097	2.445905	AGTCCATAGACCATCCCTCGTA	59.554	50.000	0.00	0.00	44.72	3.43
2651	4098	2.557490	GTCCATAGACCATCCCTCGTAC	59.443	54.545	0.00	0.00	37.00	3.67
2652	4099	1.540267	CCATAGACCATCCCTCGTACG	59.460	57.143	9.53	9.53	0.00	3.67
2653	4100	1.068472	CATAGACCATCCCTCGTACGC	60.068	57.143	11.24	0.00	0.00	4.42
2654	4101	0.820891	TAGACCATCCCTCGTACGCC	60.821	60.000	11.24	0.00	0.00	5.68
2655	4102	3.148031	GACCATCCCTCGTACGCCC	62.148	68.421	11.24	0.00	0.00	6.13
2656	4103	3.151710	CCATCCCTCGTACGCCCA	61.152	66.667	11.24	0.00	0.00	5.36
2657	4104	2.106332	CATCCCTCGTACGCCCAC	59.894	66.667	11.24	0.00	0.00	4.61
2658	4105	2.043248	ATCCCTCGTACGCCCACT	60.043	61.111	11.24	0.00	0.00	4.00
2659	4106	1.684734	ATCCCTCGTACGCCCACTT	60.685	57.895	11.24	0.00	0.00	3.16
2660	4107	0.396139	ATCCCTCGTACGCCCACTTA	60.396	55.000	11.24	0.00	0.00	2.24
2721	4168	2.210116	ACTTGCACTAACAACACCGAG	58.790	47.619	0.00	0.00	0.00	4.63
2740	4187	3.685550	CGAGGATTTCTGGGCTTGGTATT	60.686	47.826	0.00	0.00	0.00	1.89
2762	4209	1.239347	GACAGAAAGGGCAGGTTCAC	58.761	55.000	0.00	0.00	0.00	3.18
2784	4232	2.481795	GGTAGCCTCCGCGTACAATTTA	60.482	50.000	4.92	0.00	41.18	1.40
2861	4309	5.006153	TCAAGTGTTCAGAGAGACGAAAA	57.994	39.130	0.00	0.00	0.00	2.29
2884	4332	1.242076	CTGGTGCTCCTTGTGGAAAG	58.758	55.000	6.34	0.00	42.66	2.62
2907	4355	5.894393	AGTAAAGATTCCCTCGAAGATCAGA	59.106	40.000	0.00	0.00	33.89	3.27
2926	4374	2.435805	AGAATCTTCTTATGGCGGCTGA	59.564	45.455	11.43	0.31	32.55	4.26
2927	4375	3.072184	AGAATCTTCTTATGGCGGCTGAT	59.928	43.478	11.43	0.00	32.55	2.90
2928	4376	2.245159	TCTTCTTATGGCGGCTGATG	57.755	50.000	11.43	6.06	0.00	3.07
2929	4377	0.590195	CTTCTTATGGCGGCTGATGC	59.410	55.000	11.43	0.00	38.76	3.91
3073	4521	2.126502	GCATTTGGGCGTTGTCCG	60.127	61.111	0.00	0.00	40.40	4.79
3144	4592	6.259550	AGATTGTGGTTATTTGAACTCAGC	57.740	37.500	0.00	0.00	0.00	4.26
3171	4619	0.737367	TGGATCAAGCGAGCTTCACG	60.737	55.000	7.44	0.00	33.42	4.35
3191	4639	1.513158	CGATGGCCGTCACTCTCTT	59.487	57.895	24.56	0.00	0.00	2.85
3192	4640	0.803768	CGATGGCCGTCACTCTCTTG	60.804	60.000	24.56	1.81	0.00	3.02
3252	4700	3.256631	CCATCTTTCAAAGTCCCCAACAG	59.743	47.826	0.00	0.00	0.00	3.16
3271	4719	7.264947	CCAACAGACAATTTCCTTTGTAAACT	58.735	34.615	0.00	0.00	39.85	2.66
3308	4756	2.335323	GGCAGCTTGCTAATAGCCC	58.665	57.895	10.06	0.00	44.28	5.19
3309	4757	0.466189	GGCAGCTTGCTAATAGCCCA	60.466	55.000	10.06	0.00	44.28	5.36
3310	4758	0.950116	GCAGCTTGCTAATAGCCCAG	59.050	55.000	10.06	6.97	41.51	4.45
3311	4759	1.475751	GCAGCTTGCTAATAGCCCAGA	60.476	52.381	10.06	0.00	41.51	3.86
3312	4760	2.492012	CAGCTTGCTAATAGCCCAGAG	58.508	52.381	10.06	4.08	41.51	3.35

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
53	60	1.664965	GGTGAGCGGACACAGACAC	60.665	63.158	12.12	0.00	41.88	3.67
64	71	0.391927	TCCGGGTATTTTGGTGAGCG	60.392	55.000	0.00	0.00	0.00	5.03
78	85	0.538118	TTAAGATTGGTCGGTCCGGG	59.462	55.000	12.29	0.00	39.52	5.73
82	89	2.486727	GGGGGATTAAGATTGGTCGGTC	60.487	54.545	0.00	0.00	0.00	4.79
91	98	4.827789	TGCTACTACTGGGGGATTAAGAT	58.172	43.478	0.00	0.00	0.00	2.40
97	104	1.490910	GCTTTGCTACTACTGGGGGAT	59.509	52.381	0.00	0.00	0.00	3.85
99	106	0.618458	TGCTTTGCTACTACTGGGGG	59.382	55.000	0.00	0.00	0.00	5.40
100	107	2.489938	TTGCTTTGCTACTACTGGGG	57.510	50.000	0.00	0.00	0.00	4.96
101	108	3.878778	AGATTGCTTTGCTACTACTGGG	58.121	45.455	0.00	0.00	0.00	4.45
103	110	9.922305	GTTATTAAGATTGCTTTGCTACTACTG	57.078	33.333	0.00	0.00	35.56	2.74
124	140	9.125026	CAGAGGCTGTTCTTAATAATGGTTATT	57.875	33.333	0.00	1.17	39.13	1.40
126	142	6.542370	GCAGAGGCTGTTCTTAATAATGGTTA	59.458	38.462	0.00	0.00	36.96	2.85
127	143	5.358160	GCAGAGGCTGTTCTTAATAATGGTT	59.642	40.000	0.00	0.00	36.96	3.67
128	144	4.884164	GCAGAGGCTGTTCTTAATAATGGT	59.116	41.667	0.00	0.00	36.96	3.55
129	145	5.429957	GCAGAGGCTGTTCTTAATAATGG	57.570	43.478	0.00	0.00	36.96	3.16
145	161	2.375766	GCGTCACACGAAGCAGAGG	61.376	63.158	0.00	0.00	46.05	3.69
153	169	1.131693	CTATGTACTGGCGTCACACGA	59.868	52.381	0.00	0.00	46.05	4.35
166	182	6.522054	TCACTTAATTAGCTGGCCTATGTAC	58.478	40.000	3.32	0.00	0.00	2.90
176	192	3.190079	TGCTCGCTCACTTAATTAGCTG	58.810	45.455	0.00	0.00	34.03	4.24
177	193	3.526931	TGCTCGCTCACTTAATTAGCT	57.473	42.857	0.00	0.00	34.03	3.32
178	194	4.582459	CTTTGCTCGCTCACTTAATTAGC	58.418	43.478	0.00	0.00	0.00	3.09
179	195	4.093408	TGCTTTGCTCGCTCACTTAATTAG	59.907	41.667	0.00	0.00	0.00	1.73
180	196	4.000325	TGCTTTGCTCGCTCACTTAATTA	59.000	39.130	0.00	0.00	0.00	1.40
181	197	2.813754	TGCTTTGCTCGCTCACTTAATT	59.186	40.909	0.00	0.00	0.00	1.40
182	198	2.426522	TGCTTTGCTCGCTCACTTAAT	58.573	42.857	0.00	0.00	0.00	1.40
193	209	0.740737	AACGGGCATATGCTTTGCTC	59.259	50.000	26.12	9.08	40.03	4.26
261	277	4.030977	GCATGTACGTACGTGTTTCCTTAG	59.969	45.833	35.88	17.10	43.38	2.18
263	279	2.733026	GCATGTACGTACGTGTTTCCTT	59.267	45.455	35.88	3.43	43.38	3.36
328	348	1.593750	GCGACAGGATGCTGCCTAG	60.594	63.158	14.95	4.43	42.53	3.02
358	378	1.200483	GTGCACCATATCGACAGACG	58.800	55.000	5.22	0.00	44.09	4.18
360	380	1.099689	TCGTGCACCATATCGACAGA	58.900	50.000	12.15	0.00	0.00	3.41
374	394	2.165319	AGAGGGTACTTTTGTCGTGC	57.835	50.000	0.00	0.00	0.00	5.34
376	396	4.283722	AGATCAAGAGGGTACTTTTGTCGT	59.716	41.667	0.00	0.00	39.24	4.34
465	489	0.738412	CCCGTCCGGACAACACATAC	60.738	60.000	32.80	4.66	37.50	2.39
526	561	1.069500	ACGTTTCGAGGCCATTTTTCG	60.069	47.619	5.01	5.02	35.76	3.46
553	588	0.313043	CAAGCAACCACAGCAGGAAG	59.687	55.000	0.00	0.00	0.00	3.46
565	603	1.166531	AGTTGGACGAGGCAAGCAAC	61.167	55.000	0.00	0.00	0.00	4.17
576	614	1.337728	TGTGGTAGCATGAGTTGGACG	60.338	52.381	0.00	0.00	0.00	4.79
598	636	2.742372	AACGCCATGACACCGAGC	60.742	61.111	0.00	0.00	0.00	5.03
602	640	1.586154	CCTTCCAACGCCATGACACC	61.586	60.000	0.00	0.00	0.00	4.16
604	642	1.303236	CCCTTCCAACGCCATGACA	60.303	57.895	0.00	0.00	0.00	3.58
706	784	6.804534	TTGAGTGAAAAATAAACACGCAAG	57.195	33.333	0.00	0.00	44.37	4.01
710	788	7.908082	TGAGTTCTTGAGTGAAAAATAAACACG	59.092	33.333	0.00	0.00	39.19	4.49
715	793	7.042051	CCTCGTGAGTTCTTGAGTGAAAAATAA	60.042	37.037	0.00	0.00	0.00	1.40
717	795	5.237344	CCTCGTGAGTTCTTGAGTGAAAAAT	59.763	40.000	0.00	0.00	0.00	1.82
722	800	2.583143	TCCTCGTGAGTTCTTGAGTGA	58.417	47.619	0.00	0.00	0.00	3.41
723	801	3.584406	ATCCTCGTGAGTTCTTGAGTG	57.416	47.619	0.00	0.00	0.00	3.51
737	815	4.867047	GTCAGACCATATGCATTATCCTCG	59.133	45.833	3.54	0.00	0.00	4.63
740	818	4.389992	CACGTCAGACCATATGCATTATCC	59.610	45.833	3.54	0.00	0.00	2.59
755	833	2.677836	GCAATCTTATTGCCACGTCAGA	59.322	45.455	12.53	0.00	39.38	3.27
758	836	2.420022	ACAGCAATCTTATTGCCACGTC	59.580	45.455	18.37	0.00	45.98	4.34
805	888	1.503542	CCCACGCAATTGCAGAGTC	59.496	57.895	28.77	0.00	42.21	3.36
818	901	1.154225	GAAACAGCGAATGCCCACG	60.154	57.895	0.00	0.00	44.31	4.94
866	949	5.640357	CACTGCGTCAAAATAACCCTAGTTA	59.360	40.000	0.00	0.00	42.54	2.24
868	951	4.000988	CACTGCGTCAAAATAACCCTAGT	58.999	43.478	0.00	0.00	0.00	2.57
869	952	3.374058	CCACTGCGTCAAAATAACCCTAG	59.626	47.826	0.00	0.00	0.00	3.02
870	953	3.340034	CCACTGCGTCAAAATAACCCTA	58.660	45.455	0.00	0.00	0.00	3.53
871	954	2.159382	CCACTGCGTCAAAATAACCCT	58.841	47.619	0.00	0.00	0.00	4.34
872	955	1.201414	CCCACTGCGTCAAAATAACCC	59.799	52.381	0.00	0.00	0.00	4.11
877	960	0.673437	CCAACCCACTGCGTCAAAAT	59.327	50.000	0.00	0.00	0.00	1.82
879	962	1.826054	CCCAACCCACTGCGTCAAA	60.826	57.895	0.00	0.00	0.00	2.69
893	976	0.613853	CTCTCCGGTCTGGTACCCAA	60.614	60.000	10.07	0.00	46.62	4.12
982	1065	4.803426	GACCGACGAGCTGGCCTG	62.803	72.222	3.32	4.26	0.00	4.85
1051	1134	1.198713	GAGAGGGATGTGAAGCAGGA	58.801	55.000	0.00	0.00	0.00	3.86
1053	1136	2.101249	GAGAGAGAGGGATGTGAAGCAG	59.899	54.545	0.00	0.00	0.00	4.24
1055	1138	2.362077	GAGAGAGAGAGGGATGTGAAGC	59.638	54.545	0.00	0.00	0.00	3.86
1057	1140	5.458451	TTAGAGAGAGAGAGGGATGTGAA	57.542	43.478	0.00	0.00	0.00	3.18
1059	1142	5.241506	GTGATTAGAGAGAGAGAGGGATGTG	59.758	48.000	0.00	0.00	0.00	3.21
1060	1143	5.385198	GTGATTAGAGAGAGAGAGGGATGT	58.615	45.833	0.00	0.00	0.00	3.06
1062	1145	4.418526	TGGTGATTAGAGAGAGAGAGGGAT	59.581	45.833	0.00	0.00	0.00	3.85
1063	1146	3.788708	TGGTGATTAGAGAGAGAGAGGGA	59.211	47.826	0.00	0.00	0.00	4.20
1065	1148	4.531854	TGTGGTGATTAGAGAGAGAGAGG	58.468	47.826	0.00	0.00	0.00	3.69
1066	1149	4.580167	CCTGTGGTGATTAGAGAGAGAGAG	59.420	50.000	0.00	0.00	0.00	3.20
1067	1150	4.228438	TCCTGTGGTGATTAGAGAGAGAGA	59.772	45.833	0.00	0.00	0.00	3.10
1074	1167	3.452264	TGTGGATCCTGTGGTGATTAGAG	59.548	47.826	14.23	0.00	0.00	2.43
1088	1181	1.138859	TGATGATGGACGTGTGGATCC	59.861	52.381	4.20	4.20	35.37	3.36
1089	1182	2.159043	AGTGATGATGGACGTGTGGATC	60.159	50.000	0.00	0.00	0.00	3.36
1091	1184	1.204704	GAGTGATGATGGACGTGTGGA	59.795	52.381	0.00	0.00	0.00	4.02
1092	1185	1.205655	AGAGTGATGATGGACGTGTGG	59.794	52.381	0.00	0.00	0.00	4.17
1093	1186	2.265683	CAGAGTGATGATGGACGTGTG	58.734	52.381	0.00	0.00	0.00	3.82
1152	1252	4.272018	CCATGACACGAAGAAATGGAGATC	59.728	45.833	0.00	0.00	40.23	2.75
1154	1254	3.260632	TCCATGACACGAAGAAATGGAGA	59.739	43.478	0.00	0.00	41.39	3.71
1169	1269	2.156446	CGCACGTACCGTCCATGAC	61.156	63.158	0.00	0.00	38.32	3.06
1214	1317	1.823610	ACGTAGTCCTCCTGGTTTAGC	59.176	52.381	0.00	0.00	29.74	3.09
1229	1332	1.795768	AACACCACATCAGCACGTAG	58.204	50.000	0.00	0.00	0.00	3.51
1234	1337	2.098614	ACAACAAACACCACATCAGCA	58.901	42.857	0.00	0.00	0.00	4.41
1235	1338	2.358898	AGACAACAAACACCACATCAGC	59.641	45.455	0.00	0.00	0.00	4.26
1236	1339	3.303329	CGAGACAACAAACACCACATCAG	60.303	47.826	0.00	0.00	0.00	2.90
1237	1340	2.611751	CGAGACAACAAACACCACATCA	59.388	45.455	0.00	0.00	0.00	3.07
1238	1341	2.869801	TCGAGACAACAAACACCACATC	59.130	45.455	0.00	0.00	0.00	3.06
1239	1342	2.912771	TCGAGACAACAAACACCACAT	58.087	42.857	0.00	0.00	0.00	3.21
1241	1344	2.869801	TGATCGAGACAACAAACACCAC	59.130	45.455	0.00	0.00	0.00	4.16
1244	1349	2.096218	GCCTGATCGAGACAACAAACAC	60.096	50.000	0.00	0.00	0.00	3.32
1247	1352	1.808411	GGCCTGATCGAGACAACAAA	58.192	50.000	0.00	0.00	0.00	2.83
1386	1497	0.535780	TGACGGTGTACTCGGTCTGT	60.536	55.000	26.03	10.38	38.11	3.41
1400	1511	1.553690	AACCTGGAGGATGGTGACGG	61.554	60.000	0.00	0.00	36.57	4.79
1430	1541	4.612412	TTGTGTCGGGTGGCCGTC	62.612	66.667	0.00	0.00	34.52	4.79
1431	1542	4.178169	TTTGTGTCGGGTGGCCGT	62.178	61.111	0.00	0.00	34.52	5.68
1432	1543	3.353836	CTTTGTGTCGGGTGGCCG	61.354	66.667	0.00	0.00	0.00	6.13
1433	1544	2.983592	CCTTTGTGTCGGGTGGCC	60.984	66.667	0.00	0.00	0.00	5.36
1439	1550	4.025401	GTGGCGCCTTTGTGTCGG	62.025	66.667	29.70	0.00	0.00	4.79
1441	1552	0.882927	TAGTGTGGCGCCTTTGTGTC	60.883	55.000	29.70	10.72	0.00	3.67
1445	1556	0.881118	AATGTAGTGTGGCGCCTTTG	59.119	50.000	29.70	0.00	0.00	2.77
1446	1557	0.881118	CAATGTAGTGTGGCGCCTTT	59.119	50.000	29.70	12.66	0.00	3.11
1447	1558	0.250727	ACAATGTAGTGTGGCGCCTT	60.251	50.000	29.70	13.03	0.00	4.35
1448	1559	0.955428	CACAATGTAGTGTGGCGCCT	60.955	55.000	29.70	9.99	44.29	5.52
1449	1560	1.501741	CACAATGTAGTGTGGCGCC	59.498	57.895	22.73	22.73	44.29	6.53
1455	1566	0.591170	GGCGTTGCACAATGTAGTGT	59.409	50.000	4.63	0.00	41.52	3.55
1456	1567	0.874390	AGGCGTTGCACAATGTAGTG	59.126	50.000	4.63	0.00	42.37	2.74
1457	1568	1.156736	GAGGCGTTGCACAATGTAGT	58.843	50.000	4.63	0.00	0.00	2.73
1458	1569	1.135972	GTGAGGCGTTGCACAATGTAG	60.136	52.381	4.63	0.00	35.19	2.74
1459	1570	0.871722	GTGAGGCGTTGCACAATGTA	59.128	50.000	4.63	0.00	35.19	2.29
1460	1571	1.100463	TGTGAGGCGTTGCACAATGT	61.100	50.000	4.63	0.00	41.61	2.71
1461	1572	0.386352	CTGTGAGGCGTTGCACAATG	60.386	55.000	0.00	0.00	43.65	2.82
1462	1573	0.534877	TCTGTGAGGCGTTGCACAAT	60.535	50.000	0.00	0.00	43.65	2.71
1463	1574	0.534877	ATCTGTGAGGCGTTGCACAA	60.535	50.000	0.00	0.00	43.65	3.33
1464	1575	0.320050	TATCTGTGAGGCGTTGCACA	59.680	50.000	0.00	0.00	42.25	4.57
1465	1576	1.002366	CTATCTGTGAGGCGTTGCAC	58.998	55.000	0.00	0.00	35.63	4.57
1466	1577	0.108186	CCTATCTGTGAGGCGTTGCA	60.108	55.000	0.00	0.00	0.00	4.08
1467	1578	2.682893	CCTATCTGTGAGGCGTTGC	58.317	57.895	0.00	0.00	0.00	4.17
1473	1584	1.032794	TGTAGCGCCTATCTGTGAGG	58.967	55.000	2.29	0.00	37.12	3.86
1474	1585	1.598183	CGTGTAGCGCCTATCTGTGAG	60.598	57.143	2.29	0.00	0.00	3.51
1475	1586	0.380733	CGTGTAGCGCCTATCTGTGA	59.619	55.000	2.29	0.00	0.00	3.58
1476	1587	2.873367	CGTGTAGCGCCTATCTGTG	58.127	57.895	2.29	0.00	0.00	3.66
1504	1615	3.357079	GCAGTCTGGGGTGCAACG	61.357	66.667	1.14	0.00	39.62	4.10
1505	1616	2.124507	TAGGCAGTCTGGGGTGCAAC	62.125	60.000	1.14	0.00	41.75	4.17
1506	1617	1.422977	TTAGGCAGTCTGGGGTGCAA	61.423	55.000	1.14	0.00	41.75	4.08
1507	1618	1.422977	TTTAGGCAGTCTGGGGTGCA	61.423	55.000	1.14	0.00	41.75	4.57
1508	1619	0.251165	TTTTAGGCAGTCTGGGGTGC	60.251	55.000	1.14	0.00	39.08	5.01
1509	1620	2.286365	TTTTTAGGCAGTCTGGGGTG	57.714	50.000	1.14	0.00	0.00	4.61
1510	1621	3.165071	CAATTTTTAGGCAGTCTGGGGT	58.835	45.455	1.14	0.00	0.00	4.95
1511	1622	2.094026	GCAATTTTTAGGCAGTCTGGGG	60.094	50.000	1.14	0.00	0.00	4.96
1512	1623	2.827921	AGCAATTTTTAGGCAGTCTGGG	59.172	45.455	1.14	0.00	0.00	4.45
1513	1624	5.183904	ACTTAGCAATTTTTAGGCAGTCTGG	59.816	40.000	1.14	0.00	0.00	3.86
1514	1625	6.072508	TGACTTAGCAATTTTTAGGCAGTCTG	60.073	38.462	0.00	0.00	33.92	3.51
1515	1626	6.003950	TGACTTAGCAATTTTTAGGCAGTCT	58.996	36.000	0.00	0.00	33.92	3.24
1516	1627	6.254281	TGACTTAGCAATTTTTAGGCAGTC	57.746	37.500	0.00	0.00	33.59	3.51
1517	1628	6.840780	ATGACTTAGCAATTTTTAGGCAGT	57.159	33.333	0.00	0.00	0.00	4.40
1518	1629	7.062605	CACAATGACTTAGCAATTTTTAGGCAG	59.937	37.037	0.00	0.00	0.00	4.85
1519	1630	6.867816	CACAATGACTTAGCAATTTTTAGGCA	59.132	34.615	0.00	0.00	0.00	4.75
1520	1631	6.183360	GCACAATGACTTAGCAATTTTTAGGC	60.183	38.462	0.00	0.00	0.00	3.93
1521	1632	6.867816	TGCACAATGACTTAGCAATTTTTAGG	59.132	34.615	0.00	0.00	31.42	2.69
1522	1633	7.809331	TCTGCACAATGACTTAGCAATTTTTAG	59.191	33.333	0.00	0.00	34.45	1.85
1523	1634	7.656412	TCTGCACAATGACTTAGCAATTTTTA	58.344	30.769	0.00	0.00	34.45	1.52
1524	1635	6.514947	TCTGCACAATGACTTAGCAATTTTT	58.485	32.000	0.00	0.00	34.45	1.94
1525	1636	6.088016	TCTGCACAATGACTTAGCAATTTT	57.912	33.333	0.00	0.00	34.45	1.82
1526	1637	5.706916	CTCTGCACAATGACTTAGCAATTT	58.293	37.500	0.00	0.00	34.45	1.82
1527	1638	4.380233	GCTCTGCACAATGACTTAGCAATT	60.380	41.667	0.00	0.00	34.45	2.32
1528	1639	3.128242	GCTCTGCACAATGACTTAGCAAT	59.872	43.478	0.00	0.00	34.45	3.56
1529	1640	2.485426	GCTCTGCACAATGACTTAGCAA	59.515	45.455	0.00	0.00	34.45	3.91
1530	1641	2.079158	GCTCTGCACAATGACTTAGCA	58.921	47.619	0.00	0.00	0.00	3.49
1531	1642	2.354259	AGCTCTGCACAATGACTTAGC	58.646	47.619	0.00	0.00	0.00	3.09
1532	1643	3.999001	TGAAGCTCTGCACAATGACTTAG	59.001	43.478	0.00	0.00	0.00	2.18
1533	1644	3.999001	CTGAAGCTCTGCACAATGACTTA	59.001	43.478	0.00	0.00	0.00	2.24
1534	1645	2.812591	CTGAAGCTCTGCACAATGACTT	59.187	45.455	0.00	0.00	0.00	3.01
1535	1646	2.038164	TCTGAAGCTCTGCACAATGACT	59.962	45.455	0.00	0.00	0.00	3.41
1536	1647	2.415857	CTCTGAAGCTCTGCACAATGAC	59.584	50.000	0.00	0.00	0.00	3.06
1537	1648	2.696506	CTCTGAAGCTCTGCACAATGA	58.303	47.619	0.00	0.00	0.00	2.57
1538	1649	1.130749	GCTCTGAAGCTCTGCACAATG	59.869	52.381	0.00	0.00	45.55	2.82
1539	1650	1.451067	GCTCTGAAGCTCTGCACAAT	58.549	50.000	0.00	0.00	45.55	2.71
1540	1651	2.924185	GCTCTGAAGCTCTGCACAA	58.076	52.632	0.00	0.00	45.55	3.33
1541	1652	4.689484	GCTCTGAAGCTCTGCACA	57.311	55.556	0.00	0.00	45.55	4.57
1557	1668	4.475312	ACTATACAGTGCAGCGCCTAGC	62.475	54.545	2.29	7.01	38.99	3.42
1558	1669	1.338337	ACTATACAGTGCAGCGCCTAG	59.662	52.381	2.29	0.00	32.25	3.02
1559	1670	1.067060	CACTATACAGTGCAGCGCCTA	59.933	52.381	2.29	0.00	45.44	3.93
1560	1671	0.179100	CACTATACAGTGCAGCGCCT	60.179	55.000	2.29	0.00	45.44	5.52
1561	1672	2.301505	CACTATACAGTGCAGCGCC	58.698	57.895	2.29	0.00	45.44	6.53
1569	1680	1.681793	CTAGGCGCCACACTATACAGT	59.318	52.381	31.54	5.27	34.42	3.55
1570	1681	1.603172	GCTAGGCGCCACACTATACAG	60.603	57.143	31.54	11.37	0.00	2.74
1571	1682	0.387929	GCTAGGCGCCACACTATACA	59.612	55.000	31.54	0.33	0.00	2.29
1572	1683	0.674534	AGCTAGGCGCCACACTATAC	59.325	55.000	31.54	8.64	40.39	1.47
1573	1684	0.959553	GAGCTAGGCGCCACACTATA	59.040	55.000	31.54	10.17	40.39	1.31
1574	1685	0.757188	AGAGCTAGGCGCCACACTAT	60.757	55.000	31.54	16.52	40.39	2.12
1575	1686	1.379977	AGAGCTAGGCGCCACACTA	60.380	57.895	31.54	11.42	40.39	2.74
1576	1687	2.681778	AGAGCTAGGCGCCACACT	60.682	61.111	31.54	21.99	40.39	3.55
1577	1688	2.202810	GAGAGCTAGGCGCCACAC	60.203	66.667	31.54	17.11	40.39	3.82
1578	1689	2.679996	TGAGAGCTAGGCGCCACA	60.680	61.111	31.54	15.42	40.39	4.17
1579	1690	2.105930	CTGAGAGCTAGGCGCCAC	59.894	66.667	31.54	17.93	40.39	5.01
1580	1691	3.150335	CCTGAGAGCTAGGCGCCA	61.150	66.667	31.54	14.00	40.39	5.69
1589	1700	3.362399	TAGTGCAGCGCCTGAGAGC	62.362	63.158	2.29	0.00	39.42	4.09
1590	1701	1.226916	CTAGTGCAGCGCCTGAGAG	60.227	63.158	2.29	0.00	32.44	3.20
1591	1702	1.979155	ACTAGTGCAGCGCCTGAGA	60.979	57.895	2.29	0.00	32.44	3.27
1592	1703	1.808799	CACTAGTGCAGCGCCTGAG	60.809	63.158	10.54	0.34	32.44	3.35
1593	1704	2.262603	CACTAGTGCAGCGCCTGA	59.737	61.111	10.54	0.00	32.44	3.86
1594	1705	2.816958	CCACTAGTGCAGCGCCTG	60.817	66.667	17.86	2.69	34.12	4.85
1595	1706	2.883828	AACCACTAGTGCAGCGCCT	61.884	57.895	17.86	0.00	0.00	5.52
1596	1707	2.358737	AACCACTAGTGCAGCGCC	60.359	61.111	17.86	0.00	0.00	6.53
1597	1708	2.863153	CAACCACTAGTGCAGCGC	59.137	61.111	17.86	0.00	0.00	5.92
1598	1709	1.960763	TGCAACCACTAGTGCAGCG	60.961	57.895	17.86	6.34	31.61	5.18
1599	1710	1.576421	GTGCAACCACTAGTGCAGC	59.424	57.895	17.86	18.77	38.93	5.25
1608	1719	3.735746	GCTTCATTTTGTAGTGCAACCAC	59.264	43.478	0.00	0.00	42.39	4.16
1609	1720	3.382865	TGCTTCATTTTGTAGTGCAACCA	59.617	39.130	0.00	0.00	37.80	3.67
1610	1721	3.976169	TGCTTCATTTTGTAGTGCAACC	58.024	40.909	0.00	0.00	37.80	3.77
1612	1723	4.142071	TGGTTGCTTCATTTTGTAGTGCAA	60.142	37.500	0.00	0.00	36.74	4.08
1613	1724	3.382865	TGGTTGCTTCATTTTGTAGTGCA	59.617	39.130	0.00	0.00	0.00	4.57
1614	1725	3.735746	GTGGTTGCTTCATTTTGTAGTGC	59.264	43.478	0.00	0.00	0.00	4.40
1615	1726	5.186996	AGTGGTTGCTTCATTTTGTAGTG	57.813	39.130	0.00	0.00	0.00	2.74
1616	1727	6.017109	CACTAGTGGTTGCTTCATTTTGTAGT	60.017	38.462	15.49	0.00	0.00	2.73
1617	1728	6.373779	CACTAGTGGTTGCTTCATTTTGTAG	58.626	40.000	15.49	0.00	0.00	2.74
1618	1729	5.278266	GCACTAGTGGTTGCTTCATTTTGTA	60.278	40.000	23.95	0.00	0.00	2.41
1619	1730	4.499696	GCACTAGTGGTTGCTTCATTTTGT	60.500	41.667	23.95	0.00	0.00	2.83
1620	1731	3.983344	GCACTAGTGGTTGCTTCATTTTG	59.017	43.478	23.95	0.00	0.00	2.44
1621	1732	3.636300	TGCACTAGTGGTTGCTTCATTTT	59.364	39.130	23.95	0.00	0.00	1.82
1622	1733	3.221771	TGCACTAGTGGTTGCTTCATTT	58.778	40.909	23.95	0.00	0.00	2.32
1623	1734	2.862541	TGCACTAGTGGTTGCTTCATT	58.137	42.857	23.95	0.00	0.00	2.57
1624	1735	2.554032	GTTGCACTAGTGGTTGCTTCAT	59.446	45.455	23.95	0.00	0.00	2.57
1625	1736	1.946768	GTTGCACTAGTGGTTGCTTCA	59.053	47.619	23.95	8.83	0.00	3.02
1626	1737	1.069906	CGTTGCACTAGTGGTTGCTTC	60.070	52.381	23.95	6.25	0.00	3.86
1627	1738	0.944386	CGTTGCACTAGTGGTTGCTT	59.056	50.000	23.95	0.00	0.00	3.91
1628	1739	1.507141	GCGTTGCACTAGTGGTTGCT	61.507	55.000	23.95	0.00	0.00	3.91
1629	1740	1.082104	GCGTTGCACTAGTGGTTGC	60.082	57.895	23.95	10.41	0.00	4.17
1630	1741	0.884704	AGGCGTTGCACTAGTGGTTG	60.885	55.000	23.95	0.00	0.00	3.77
1631	1742	0.682852	TAGGCGTTGCACTAGTGGTT	59.317	50.000	23.95	3.73	0.00	3.67
1632	1743	0.246635	CTAGGCGTTGCACTAGTGGT	59.753	55.000	23.95	0.00	33.63	4.16
1633	1744	0.530744	TCTAGGCGTTGCACTAGTGG	59.469	55.000	23.95	8.63	38.24	4.00
1634	1745	2.263077	CTTCTAGGCGTTGCACTAGTG	58.737	52.381	18.93	18.93	38.24	2.74
1635	1746	1.404315	GCTTCTAGGCGTTGCACTAGT	60.404	52.381	8.47	0.00	38.24	2.57
1636	1747	1.134965	AGCTTCTAGGCGTTGCACTAG	60.135	52.381	3.29	3.29	38.38	2.57
1637	1748	0.895530	AGCTTCTAGGCGTTGCACTA	59.104	50.000	0.00	0.00	37.29	2.74
1638	1749	0.895530	TAGCTTCTAGGCGTTGCACT	59.104	50.000	0.00	0.00	37.29	4.40
1639	1750	1.281899	CTAGCTTCTAGGCGTTGCAC	58.718	55.000	0.00	0.00	37.29	4.57
1640	1751	0.175760	CCTAGCTTCTAGGCGTTGCA	59.824	55.000	6.94	0.00	37.29	4.08
1641	1752	2.979130	CCTAGCTTCTAGGCGTTGC	58.021	57.895	6.94	0.00	37.29	4.17
1649	1760	9.787232	ACTATACAGTGTAGCGCCTAGCTTCTA	62.787	44.444	2.29	0.00	43.79	2.10
1651	1762	6.996034	ACTATACAGTGTAGCGCCTAGCTTC	61.996	48.000	2.29	0.00	43.79	3.86
1652	1763	5.228145	ACTATACAGTGTAGCGCCTAGCTT	61.228	45.833	2.29	0.00	43.79	3.74
1653	1764	3.748027	ACTATACAGTGTAGCGCCTAGCT	60.748	47.826	2.29	0.00	46.39	3.32
1654	1765	2.553172	ACTATACAGTGTAGCGCCTAGC	59.447	50.000	2.29	0.00	38.99	3.42
1655	1766	4.148563	CACTATACAGTGTAGCGCCTAG	57.851	50.000	2.29	7.59	46.03	3.02
1666	1777	1.681793	CTAGGCGCCACACTATACAGT	59.318	52.381	31.54	5.27	34.42	3.55
1667	1778	1.603172	GCTAGGCGCCACACTATACAG	60.603	57.143	31.54	11.37	0.00	2.74
1668	1779	0.387929	GCTAGGCGCCACACTATACA	59.612	55.000	31.54	0.33	0.00	2.29
1669	1780	0.674534	AGCTAGGCGCCACACTATAC	59.325	55.000	31.54	8.64	40.39	1.47
1670	1781	0.959553	GAGCTAGGCGCCACACTATA	59.040	55.000	31.54	10.17	40.39	1.31
1671	1782	0.757188	AGAGCTAGGCGCCACACTAT	60.757	55.000	31.54	16.52	40.39	2.12
1672	1783	1.379977	AGAGCTAGGCGCCACACTA	60.380	57.895	31.54	11.42	40.39	2.74
1673	1784	2.681778	AGAGCTAGGCGCCACACT	60.682	61.111	31.54	21.99	40.39	3.55
1674	1785	2.202810	GAGAGCTAGGCGCCACAC	60.203	66.667	31.54	17.11	40.39	3.82
1675	1786	2.679996	TGAGAGCTAGGCGCCACA	60.680	61.111	31.54	15.42	40.39	4.17
1676	1787	2.105930	CTGAGAGCTAGGCGCCAC	59.894	66.667	31.54	17.93	40.39	5.01
1677	1788	3.150335	CCTGAGAGCTAGGCGCCA	61.150	66.667	31.54	14.00	40.39	5.69
1687	1798	3.117171	GTGTGCAGCGCCTGAGAG	61.117	66.667	2.29	0.00	32.44	3.20
1688	1799	3.619767	AGTGTGCAGCGCCTGAGA	61.620	61.111	2.29	0.00	32.44	3.27
1689	1800	3.420606	CAGTGTGCAGCGCCTGAG	61.421	66.667	15.59	0.00	32.44	3.35
1690	1801	3.927548	TCAGTGTGCAGCGCCTGA	61.928	61.111	18.04	18.04	32.44	3.86
1691	1802	3.720193	GTCAGTGTGCAGCGCCTG	61.720	66.667	2.29	14.85	34.12	4.85
1692	1803	2.099652	TAAGTCAGTGTGCAGCGCCT	62.100	55.000	2.29	0.00	0.00	5.52
1693	1804	1.630244	CTAAGTCAGTGTGCAGCGCC	61.630	60.000	2.29	0.00	0.00	6.53
1694	1805	0.946221	ACTAAGTCAGTGTGCAGCGC	60.946	55.000	0.00	0.00	35.62	5.92
1695	1806	2.347697	TACTAAGTCAGTGTGCAGCG	57.652	50.000	0.00	0.00	38.24	5.18
1696	1807	5.613358	AAATTACTAAGTCAGTGTGCAGC	57.387	39.130	0.00	0.00	38.24	5.25
1697	1808	7.171508	TCTGAAAATTACTAAGTCAGTGTGCAG	59.828	37.037	0.00	0.00	38.24	4.41
1698	1809	6.989759	TCTGAAAATTACTAAGTCAGTGTGCA	59.010	34.615	0.00	0.00	38.24	4.57
1699	1810	7.421530	TCTGAAAATTACTAAGTCAGTGTGC	57.578	36.000	0.00	0.00	38.24	4.57
1700	1811	9.208022	TGATCTGAAAATTACTAAGTCAGTGTG	57.792	33.333	0.00	0.00	38.24	3.82
1701	1812	9.209175	GTGATCTGAAAATTACTAAGTCAGTGT	57.791	33.333	0.00	0.00	38.24	3.55
1702	1813	9.208022	TGTGATCTGAAAATTACTAAGTCAGTG	57.792	33.333	0.00	0.00	38.24	3.66
1703	1814	9.209175	GTGTGATCTGAAAATTACTAAGTCAGT	57.791	33.333	0.00	0.00	41.62	3.41
1704	1815	8.376203	CGTGTGATCTGAAAATTACTAAGTCAG	58.624	37.037	0.00	0.00	37.62	3.51
1705	1816	7.330946	CCGTGTGATCTGAAAATTACTAAGTCA	59.669	37.037	0.00	0.00	0.00	3.41
1706	1817	7.201530	CCCGTGTGATCTGAAAATTACTAAGTC	60.202	40.741	0.00	0.00	0.00	3.01
1707	1818	6.594159	CCCGTGTGATCTGAAAATTACTAAGT	59.406	38.462	0.00	0.00	0.00	2.24
1708	1819	6.594159	ACCCGTGTGATCTGAAAATTACTAAG	59.406	38.462	0.00	0.00	0.00	2.18
1709	1820	6.370442	CACCCGTGTGATCTGAAAATTACTAA	59.630	38.462	0.00	0.00	45.76	2.24
1710	1821	5.872617	CACCCGTGTGATCTGAAAATTACTA	59.127	40.000	0.00	0.00	45.76	1.82
1711	1822	4.695455	CACCCGTGTGATCTGAAAATTACT	59.305	41.667	0.00	0.00	45.76	2.24
1712	1823	4.671766	GCACCCGTGTGATCTGAAAATTAC	60.672	45.833	0.90	0.00	45.76	1.89
1713	1824	3.438781	GCACCCGTGTGATCTGAAAATTA	59.561	43.478	0.90	0.00	45.76	1.40
1714	1825	2.228822	GCACCCGTGTGATCTGAAAATT	59.771	45.455	0.90	0.00	45.76	1.82
1715	1826	1.812571	GCACCCGTGTGATCTGAAAAT	59.187	47.619	0.90	0.00	45.76	1.82
1716	1827	1.234821	GCACCCGTGTGATCTGAAAA	58.765	50.000	0.90	0.00	45.76	2.29
1717	1828	0.948623	CGCACCCGTGTGATCTGAAA	60.949	55.000	0.90	0.00	45.76	2.69
1718	1829	1.374125	CGCACCCGTGTGATCTGAA	60.374	57.895	0.90	0.00	45.76	3.02
1719	1830	2.261361	CGCACCCGTGTGATCTGA	59.739	61.111	0.90	0.00	45.76	3.27
1720	1831	2.261361	TCGCACCCGTGTGATCTG	59.739	61.111	0.90	0.00	45.76	2.90
1735	1846	2.557059	TACATGCCTGACCAGCGTCG	62.557	60.000	0.00	0.00	42.37	5.12
1736	1847	0.807667	CTACATGCCTGACCAGCGTC	60.808	60.000	0.00	0.00	39.66	5.19
1737	1848	1.219124	CTACATGCCTGACCAGCGT	59.781	57.895	0.00	0.00	0.00	5.07
1738	1849	2.176273	GCTACATGCCTGACCAGCG	61.176	63.158	0.00	0.00	35.15	5.18
1739	1850	2.176273	CGCTACATGCCTGACCAGC	61.176	63.158	0.00	1.00	38.78	4.85
1740	1851	2.176273	GCGCTACATGCCTGACCAG	61.176	63.158	0.00	0.00	38.78	4.00
1741	1852	2.125147	GCGCTACATGCCTGACCA	60.125	61.111	0.00	0.00	38.78	4.02
1742	1853	0.249868	TATGCGCTACATGCCTGACC	60.250	55.000	9.73	0.00	40.06	4.02
1743	1854	1.728971	GATATGCGCTACATGCCTGAC	59.271	52.381	9.73	0.00	40.06	3.51
1744	1855	1.620323	AGATATGCGCTACATGCCTGA	59.380	47.619	9.73	0.00	40.06	3.86
1745	1856	1.730612	CAGATATGCGCTACATGCCTG	59.269	52.381	9.73	3.24	40.06	4.85
1746	1857	1.345741	ACAGATATGCGCTACATGCCT	59.654	47.619	9.73	0.00	40.06	4.75
1747	1858	1.462283	CACAGATATGCGCTACATGCC	59.538	52.381	9.73	0.00	40.06	4.40
1748	1859	2.407090	TCACAGATATGCGCTACATGC	58.593	47.619	9.73	0.00	40.06	4.06
1749	1860	2.991866	CCTCACAGATATGCGCTACATG	59.008	50.000	9.73	3.72	40.06	3.21
1750	1861	2.611473	GCCTCACAGATATGCGCTACAT	60.611	50.000	9.73	0.00	43.18	2.29
1751	1862	1.269778	GCCTCACAGATATGCGCTACA	60.270	52.381	9.73	0.00	0.00	2.74
1752	1863	1.423395	GCCTCACAGATATGCGCTAC	58.577	55.000	9.73	0.00	0.00	3.58
1753	1864	0.039165	CGCCTCACAGATATGCGCTA	60.039	55.000	9.73	0.00	38.69	4.26
1754	1865	1.300465	CGCCTCACAGATATGCGCT	60.300	57.895	9.73	0.00	38.69	5.92
1755	1866	3.238260	CGCCTCACAGATATGCGC	58.762	61.111	0.00	0.00	38.69	6.09
1757	1868	0.305922	GCAACGCCTCACAGATATGC	59.694	55.000	0.00	0.00	0.00	3.14
1758	1869	1.328680	GTGCAACGCCTCACAGATATG	59.671	52.381	0.00	0.00	33.63	1.78
1759	1870	1.066215	TGTGCAACGCCTCACAGATAT	60.066	47.619	0.00	0.00	42.39	1.63
1760	1871	0.320050	TGTGCAACGCCTCACAGATA	59.680	50.000	0.00	0.00	42.39	1.98
1761	1872	1.071299	TGTGCAACGCCTCACAGAT	59.929	52.632	0.00	0.00	42.39	2.90
1762	1873	2.503546	TGTGCAACGCCTCACAGA	59.496	55.556	0.00	0.00	42.39	3.41
1764	1875	2.179547	CACTGTGCAACGCCTCACA	61.180	57.895	0.00	4.54	42.39	3.58
1765	1876	0.878523	TACACTGTGCAACGCCTCAC	60.879	55.000	7.90	0.00	42.39	3.51
1766	1877	0.599991	CTACACTGTGCAACGCCTCA	60.600	55.000	7.90	0.00	42.39	3.86
1767	1878	0.600255	ACTACACTGTGCAACGCCTC	60.600	55.000	7.90	0.00	42.39	4.70
1768	1879	0.880278	CACTACACTGTGCAACGCCT	60.880	55.000	7.90	0.00	42.39	5.52
1769	1880	1.157870	ACACTACACTGTGCAACGCC	61.158	55.000	7.90	0.00	42.39	5.68
1770	1881	0.042188	CACACTACACTGTGCAACGC	60.042	55.000	7.90	0.00	42.39	4.84
1771	1882	0.581529	CCACACTACACTGTGCAACG	59.418	55.000	7.90	0.00	42.39	4.10
1772	1883	0.307760	GCCACACTACACTGTGCAAC	59.692	55.000	7.90	0.00	40.33	4.17
1773	1884	1.157257	CGCCACACTACACTGTGCAA	61.157	55.000	7.90	0.00	40.33	4.08
1774	1885	1.594021	CGCCACACTACACTGTGCA	60.594	57.895	7.90	0.00	40.33	4.57
1775	1886	2.954753	GCGCCACACTACACTGTGC	61.955	63.158	7.90	0.00	40.33	4.57
1776	1887	2.317609	GGCGCCACACTACACTGTG	61.318	63.158	24.80	6.19	41.19	3.66
1777	1888	2.030562	GGCGCCACACTACACTGT	59.969	61.111	24.80	0.00	0.00	3.55
1778	1889	1.291877	GAAGGCGCCACACTACACTG	61.292	60.000	31.54	0.00	0.00	3.66
1779	1890	1.004918	GAAGGCGCCACACTACACT	60.005	57.895	31.54	0.00	0.00	3.55
1780	1891	2.380410	CGAAGGCGCCACACTACAC	61.380	63.158	31.54	8.98	0.00	2.90
1781	1892	2.048597	CGAAGGCGCCACACTACA	60.049	61.111	31.54	0.00	0.00	2.74
1800	1911	0.316689	CTTTTTGTGTGACGCCCGAC	60.317	55.000	0.00	0.00	0.00	4.79
1801	1912	1.440938	CCTTTTTGTGTGACGCCCGA	61.441	55.000	0.00	0.00	0.00	5.14
1802	1913	1.008995	CCTTTTTGTGTGACGCCCG	60.009	57.895	0.00	0.00	0.00	6.13
1803	1914	0.030235	GACCTTTTTGTGTGACGCCC	59.970	55.000	0.00	0.00	0.00	6.13
1804	1915	0.736053	TGACCTTTTTGTGTGACGCC	59.264	50.000	0.00	0.00	0.00	5.68
1805	1916	1.859998	GCTGACCTTTTTGTGTGACGC	60.860	52.381	0.00	0.00	0.00	5.19
1806	1917	1.268539	GGCTGACCTTTTTGTGTGACG	60.269	52.381	0.00	0.00	0.00	4.35
1807	1918	1.268539	CGGCTGACCTTTTTGTGTGAC	60.269	52.381	0.00	0.00	0.00	3.67
1808	1919	1.021202	CGGCTGACCTTTTTGTGTGA	58.979	50.000	0.00	0.00	0.00	3.58
1809	1920	0.594796	GCGGCTGACCTTTTTGTGTG	60.595	55.000	0.00	0.00	0.00	3.82
1810	1921	1.733526	GCGGCTGACCTTTTTGTGT	59.266	52.632	0.00	0.00	0.00	3.72
1811	1922	1.370414	CGCGGCTGACCTTTTTGTG	60.370	57.895	0.00	0.00	0.00	3.33
1812	1923	1.822186	ACGCGGCTGACCTTTTTGT	60.822	52.632	12.47	0.00	0.00	2.83
1813	1924	1.370414	CACGCGGCTGACCTTTTTG	60.370	57.895	12.47	0.00	0.00	2.44
1814	1925	1.098712	TTCACGCGGCTGACCTTTTT	61.099	50.000	12.47	0.00	0.00	1.94
1815	1926	1.098712	TTTCACGCGGCTGACCTTTT	61.099	50.000	12.47	0.00	0.00	2.27
1816	1927	0.889186	ATTTCACGCGGCTGACCTTT	60.889	50.000	12.47	0.00	0.00	3.11
1817	1928	0.036765	TATTTCACGCGGCTGACCTT	60.037	50.000	12.47	0.00	0.00	3.50
1818	1929	0.460284	CTATTTCACGCGGCTGACCT	60.460	55.000	12.47	0.00	0.00	3.85
1819	1930	0.739813	ACTATTTCACGCGGCTGACC	60.740	55.000	12.47	0.00	0.00	4.02
1820	1931	1.076332	AACTATTTCACGCGGCTGAC	58.924	50.000	12.47	0.00	0.00	3.51
1821	1932	1.730064	GAAACTATTTCACGCGGCTGA	59.270	47.619	12.47	2.44	39.45	4.26
1822	1933	1.463056	TGAAACTATTTCACGCGGCTG	59.537	47.619	12.47	0.00	44.21	4.85
1823	1934	1.803334	TGAAACTATTTCACGCGGCT	58.197	45.000	12.47	0.00	44.21	5.52
1830	1941	5.361427	TGAACTGTCCGTGAAACTATTTCA	58.639	37.500	0.00	0.00	46.68	2.69
1831	1942	5.917541	TGAACTGTCCGTGAAACTATTTC	57.082	39.130	0.00	0.00	40.08	2.17
1832	1943	6.710744	AGAATGAACTGTCCGTGAAACTATTT	59.289	34.615	0.00	0.00	31.75	1.40
1833	1944	6.147821	CAGAATGAACTGTCCGTGAAACTATT	59.852	38.462	0.00	0.00	39.69	1.73
1834	1945	5.639506	CAGAATGAACTGTCCGTGAAACTAT	59.360	40.000	0.00	0.00	39.69	2.12
1835	1946	4.988540	CAGAATGAACTGTCCGTGAAACTA	59.011	41.667	0.00	0.00	39.69	2.24
1836	1947	3.809832	CAGAATGAACTGTCCGTGAAACT	59.190	43.478	0.00	0.00	39.69	2.66
1837	1948	3.560068	ACAGAATGAACTGTCCGTGAAAC	59.440	43.478	0.00	0.00	46.36	2.78
1838	1949	3.804036	ACAGAATGAACTGTCCGTGAAA	58.196	40.909	0.00	0.00	46.36	2.69
1839	1950	3.469008	ACAGAATGAACTGTCCGTGAA	57.531	42.857	0.00	0.00	46.36	3.18
1847	1958	8.583810	ACAAAATCAAATCACAGAATGAACTG	57.416	30.769	0.00	0.00	41.93	3.16
1848	1959	7.869429	GGACAAAATCAAATCACAGAATGAACT	59.131	33.333	0.00	0.00	41.93	3.01
1849	1960	7.652909	TGGACAAAATCAAATCACAGAATGAAC	59.347	33.333	0.00	0.00	41.93	3.18
1850	1961	7.724287	TGGACAAAATCAAATCACAGAATGAA	58.276	30.769	0.00	0.00	41.93	2.57
1851	1962	7.287512	TGGACAAAATCAAATCACAGAATGA	57.712	32.000	0.00	0.00	43.13	2.57
1852	1963	9.297586	CTATGGACAAAATCAAATCACAGAATG	57.702	33.333	0.00	0.00	46.00	2.67
1853	1964	8.472413	CCTATGGACAAAATCAAATCACAGAAT	58.528	33.333	0.00	0.00	0.00	2.40
1854	1965	7.451255	ACCTATGGACAAAATCAAATCACAGAA	59.549	33.333	0.00	0.00	0.00	3.02
1855	1966	6.947733	ACCTATGGACAAAATCAAATCACAGA	59.052	34.615	0.00	0.00	0.00	3.41
1856	1967	7.094248	TGACCTATGGACAAAATCAAATCACAG	60.094	37.037	0.00	0.00	0.00	3.66
1857	1968	6.718912	TGACCTATGGACAAAATCAAATCACA	59.281	34.615	0.00	0.00	0.00	3.58
1858	1969	7.156876	TGACCTATGGACAAAATCAAATCAC	57.843	36.000	0.00	0.00	0.00	3.06
1859	1970	7.773489	TTGACCTATGGACAAAATCAAATCA	57.227	32.000	0.00	0.00	34.82	2.57
1860	1971	9.657419	AATTTGACCTATGGACAAAATCAAATC	57.343	29.630	15.42	0.00	46.24	2.17
1862	1973	9.270640	CAAATTTGACCTATGGACAAAATCAAA	57.729	29.630	13.08	8.59	46.24	2.69
1863	1974	8.428063	ACAAATTTGACCTATGGACAAAATCAA	58.572	29.630	24.64	0.95	46.24	2.57
1864	1975	7.961351	ACAAATTTGACCTATGGACAAAATCA	58.039	30.769	24.64	0.00	46.24	2.57
1865	1976	8.087750	TGACAAATTTGACCTATGGACAAAATC	58.912	33.333	24.64	6.30	46.24	2.17
1866	1977	7.961351	TGACAAATTTGACCTATGGACAAAAT	58.039	30.769	24.64	7.15	46.24	1.82
1867	1978	7.353414	TGACAAATTTGACCTATGGACAAAA	57.647	32.000	24.64	0.00	46.24	2.44
1868	1979	6.968263	TGACAAATTTGACCTATGGACAAA	57.032	33.333	24.64	14.25	46.87	2.83
1869	1980	6.968263	TTGACAAATTTGACCTATGGACAA	57.032	33.333	24.64	11.75	35.80	3.18
1870	1981	7.537596	AATTGACAAATTTGACCTATGGACA	57.462	32.000	24.64	7.24	31.76	4.02
1871	1982	8.711457	CAAAATTGACAAATTTGACCTATGGAC	58.289	33.333	24.64	5.11	43.63	4.02
1872	1983	7.387397	GCAAAATTGACAAATTTGACCTATGGA	59.613	33.333	25.81	0.00	43.63	3.41
1873	1984	7.361116	GGCAAAATTGACAAATTTGACCTATGG	60.361	37.037	25.81	8.50	43.63	2.74
1874	1985	7.520686	GGCAAAATTGACAAATTTGACCTATG	58.479	34.615	25.81	13.77	43.63	2.23
1875	1986	6.368516	CGGCAAAATTGACAAATTTGACCTAT	59.631	34.615	25.81	13.80	43.63	2.57
1876	1987	5.694006	CGGCAAAATTGACAAATTTGACCTA	59.306	36.000	25.81	12.29	43.63	3.08
1877	1988	4.511082	CGGCAAAATTGACAAATTTGACCT	59.489	37.500	25.81	2.04	43.63	3.85
1878	1989	4.771360	CGGCAAAATTGACAAATTTGACC	58.229	39.130	25.81	22.88	43.63	4.02
1879	1990	4.024977	AGCGGCAAAATTGACAAATTTGAC	60.025	37.500	25.81	23.13	43.63	3.18
1880	1991	4.025061	CAGCGGCAAAATTGACAAATTTGA	60.025	37.500	25.81	2.69	43.63	2.69
1881	1992	4.212911	CAGCGGCAAAATTGACAAATTTG	58.787	39.130	19.89	19.89	43.63	2.32
1882	1993	3.303924	GCAGCGGCAAAATTGACAAATTT	60.304	39.130	3.18	0.00	45.81	1.82
1883	1994	2.223845	GCAGCGGCAAAATTGACAAATT	59.776	40.909	3.18	0.00	40.72	1.82
1884	1995	1.799994	GCAGCGGCAAAATTGACAAAT	59.200	42.857	3.18	0.00	40.72	2.32
1885	1996	1.202510	AGCAGCGGCAAAATTGACAAA	60.203	42.857	12.44	0.00	44.61	2.83
1886	1997	0.388659	AGCAGCGGCAAAATTGACAA	59.611	45.000	12.44	0.00	44.61	3.18
1887	1998	0.318869	CAGCAGCGGCAAAATTGACA	60.319	50.000	12.44	0.00	44.61	3.58
1888	1999	0.318955	ACAGCAGCGGCAAAATTGAC	60.319	50.000	12.44	0.00	44.61	3.18
1889	2000	1.068610	GTACAGCAGCGGCAAAATTGA	60.069	47.619	12.44	0.00	44.61	2.57
1890	2001	1.068333	AGTACAGCAGCGGCAAAATTG	60.068	47.619	12.44	2.26	44.61	2.32
1891	2002	1.247567	AGTACAGCAGCGGCAAAATT	58.752	45.000	12.44	0.00	44.61	1.82
1892	2003	1.200020	GAAGTACAGCAGCGGCAAAAT	59.800	47.619	12.44	0.00	44.61	1.82
1893	2004	0.591170	GAAGTACAGCAGCGGCAAAA	59.409	50.000	12.44	0.00	44.61	2.44
1894	2005	0.533978	TGAAGTACAGCAGCGGCAAA	60.534	50.000	12.44	0.00	44.61	3.68
1895	2006	0.321564	ATGAAGTACAGCAGCGGCAA	60.322	50.000	12.44	0.00	44.61	4.52
1896	2007	0.321564	AATGAAGTACAGCAGCGGCA	60.322	50.000	12.44	0.00	44.61	5.69
1897	2008	0.375106	GAATGAAGTACAGCAGCGGC	59.625	55.000	0.00	0.00	41.61	6.53
1898	2009	0.647410	CGAATGAAGTACAGCAGCGG	59.353	55.000	0.00	0.00	0.00	5.52
1899	2010	0.647410	CCGAATGAAGTACAGCAGCG	59.353	55.000	0.00	1.44	0.00	5.18
1900	2011	1.726853	ACCGAATGAAGTACAGCAGC	58.273	50.000	0.00	0.00	0.00	5.25
1901	2012	2.345641	CGAACCGAATGAAGTACAGCAG	59.654	50.000	0.00	0.00	0.00	4.24
1902	2013	2.288579	ACGAACCGAATGAAGTACAGCA	60.289	45.455	0.00	0.00	0.00	4.41
1903	2014	2.334838	ACGAACCGAATGAAGTACAGC	58.665	47.619	0.00	0.00	0.00	4.40
1904	2015	4.377022	CCAAACGAACCGAATGAAGTACAG	60.377	45.833	0.00	0.00	0.00	2.74
1905	2016	3.495377	CCAAACGAACCGAATGAAGTACA	59.505	43.478	0.00	0.00	0.00	2.90
1908	2019	2.289547	CACCAAACGAACCGAATGAAGT	59.710	45.455	0.00	0.00	0.00	3.01
1911	2022	0.589223	GCACCAAACGAACCGAATGA	59.411	50.000	0.00	0.00	0.00	2.57
1913	2024	1.314730	AAGCACCAAACGAACCGAAT	58.685	45.000	0.00	0.00	0.00	3.34
1922	2033	1.950630	CTGCGGCAAAGCACCAAAC	60.951	57.895	3.44	0.00	42.92	2.93
1925	2036	4.892965	ACCTGCGGCAAAGCACCA	62.893	61.111	3.44	0.00	42.92	4.17
1926	2037	4.347453	CACCTGCGGCAAAGCACC	62.347	66.667	3.44	0.00	42.92	5.01
1927	2038	4.347453	CCACCTGCGGCAAAGCAC	62.347	66.667	3.44	0.00	42.92	4.40
1971	2100	1.677966	TCTCGTTCTCCCCCGACAG	60.678	63.158	0.00	0.00	0.00	3.51
1972	2101	1.975407	GTCTCGTTCTCCCCCGACA	60.975	63.158	0.00	0.00	0.00	4.35
2154	2286	1.087771	CCCTTGGAATCGTACACCGC	61.088	60.000	0.00	0.00	36.19	5.68
2155	2287	0.461339	CCCCTTGGAATCGTACACCG	60.461	60.000	0.00	0.00	38.13	4.94
2318	3765	1.144503	ACCCATGATGAAGCCATCCTC	59.855	52.381	0.00	0.00	46.64	3.71
2324	3771	0.107703	TCGACACCCATGATGAAGCC	60.108	55.000	0.00	0.00	0.00	4.35
2341	3788	0.875728	ACTGTTGGTCTCGAGTCTCG	59.124	55.000	16.33	16.33	42.10	4.04
2342	3789	3.075884	ACTACTGTTGGTCTCGAGTCTC	58.924	50.000	13.13	4.53	0.00	3.36
2343	3790	3.075884	GACTACTGTTGGTCTCGAGTCT	58.924	50.000	13.13	0.00	31.29	3.24
2344	3791	2.812591	TGACTACTGTTGGTCTCGAGTC	59.187	50.000	13.13	6.74	34.01	3.36
2345	3792	2.860009	TGACTACTGTTGGTCTCGAGT	58.140	47.619	13.13	0.00	34.01	4.18
2346	3793	3.440522	TGATGACTACTGTTGGTCTCGAG	59.559	47.826	5.93	5.93	34.01	4.04
2433	3880	5.586643	TGAGCATACATTATTTGTAACCGCA	59.413	36.000	0.00	0.00	43.84	5.69
2455	3902	2.094026	AGTCGTGCTCATTGTGCTATGA	60.094	45.455	11.58	6.61	33.66	2.15
2456	3903	2.274437	AGTCGTGCTCATTGTGCTATG	58.726	47.619	11.58	4.72	0.00	2.23
2457	3904	2.544685	GAGTCGTGCTCATTGTGCTAT	58.455	47.619	11.58	0.00	43.58	2.97
2458	3905	1.996292	GAGTCGTGCTCATTGTGCTA	58.004	50.000	11.58	0.00	43.58	3.49
2459	3906	2.832931	GAGTCGTGCTCATTGTGCT	58.167	52.632	11.58	0.00	43.58	4.40
2467	3914	1.444553	CGGGTCTTGAGTCGTGCTC	60.445	63.158	3.46	3.46	44.36	4.26
2468	3915	2.651361	CGGGTCTTGAGTCGTGCT	59.349	61.111	0.00	0.00	0.00	4.40
2469	3916	3.112709	GCGGGTCTTGAGTCGTGC	61.113	66.667	0.00	0.00	0.00	5.34
2470	3917	0.600255	AAAGCGGGTCTTGAGTCGTG	60.600	55.000	0.00	0.00	34.67	4.35
2471	3918	0.963962	TAAAGCGGGTCTTGAGTCGT	59.036	50.000	0.00	0.00	34.67	4.34
2472	3919	1.630148	CTAAAGCGGGTCTTGAGTCG	58.370	55.000	0.00	0.00	34.67	4.18
2473	3920	1.275573	ACCTAAAGCGGGTCTTGAGTC	59.724	52.381	0.00	0.00	32.24	3.36
2474	3921	1.275573	GACCTAAAGCGGGTCTTGAGT	59.724	52.381	11.84	0.00	46.89	3.41
2504	3951	3.576982	ACACGGAGGAGACTGTTGAAATA	59.423	43.478	0.00	0.00	44.43	1.40
2555	4002	5.670485	TCACATAATTAACCACGCTCAGAT	58.330	37.500	0.00	0.00	0.00	2.90
2563	4010	6.294176	GCCCAGATCATCACATAATTAACCAC	60.294	42.308	0.00	0.00	0.00	4.16
2575	4022	1.524621	CGGTGGCCCAGATCATCAC	60.525	63.158	0.00	0.00	0.00	3.06
2599	4046	4.735132	TAGCTCGGGTGTGTGCGC	62.735	66.667	0.00	0.00	0.00	6.09
2601	4048	1.153745	CTCTAGCTCGGGTGTGTGC	60.154	63.158	0.00	0.00	0.00	4.57
2607	4054	0.752376	GTGTAGGCTCTAGCTCGGGT	60.752	60.000	1.39	0.00	41.70	5.28
2608	4055	1.457009	GGTGTAGGCTCTAGCTCGGG	61.457	65.000	1.39	0.00	41.70	5.14
2609	4056	0.466555	AGGTGTAGGCTCTAGCTCGG	60.467	60.000	1.39	0.00	41.70	4.63
2610	4057	2.147958	CTAGGTGTAGGCTCTAGCTCG	58.852	57.143	5.99	0.00	41.70	5.03
2611	4058	3.143728	GACTAGGTGTAGGCTCTAGCTC	58.856	54.545	7.64	2.87	41.70	4.09
2612	4059	2.158579	GGACTAGGTGTAGGCTCTAGCT	60.159	54.545	7.64	7.63	41.70	3.32
2613	4060	2.232399	GGACTAGGTGTAGGCTCTAGC	58.768	57.143	7.64	0.00	34.22	3.42
2614	4061	3.579534	TGGACTAGGTGTAGGCTCTAG	57.420	52.381	6.46	6.46	34.22	2.43
2615	4062	4.912133	TCTATGGACTAGGTGTAGGCTCTA	59.088	45.833	0.00	0.00	34.22	2.43
2616	4063	3.722627	TCTATGGACTAGGTGTAGGCTCT	59.277	47.826	0.00	0.00	34.22	4.09
2617	4064	3.822167	GTCTATGGACTAGGTGTAGGCTC	59.178	52.174	1.27	0.00	39.24	4.70
2618	4065	3.436761	GGTCTATGGACTAGGTGTAGGCT	60.437	52.174	9.27	0.00	41.82	4.58
2619	4066	2.892215	GGTCTATGGACTAGGTGTAGGC	59.108	54.545	9.27	0.00	41.82	3.93
2620	4067	4.180377	TGGTCTATGGACTAGGTGTAGG	57.820	50.000	9.27	0.00	41.82	3.18
2621	4068	4.767928	GGATGGTCTATGGACTAGGTGTAG	59.232	50.000	9.27	0.00	41.82	2.74
2622	4069	4.448787	GGGATGGTCTATGGACTAGGTGTA	60.449	50.000	9.27	0.00	41.82	2.90
2623	4070	3.577919	GGATGGTCTATGGACTAGGTGT	58.422	50.000	9.27	0.00	41.82	4.16
2624	4071	2.900546	GGGATGGTCTATGGACTAGGTG	59.099	54.545	9.27	0.00	41.82	4.00
2625	4072	2.798368	AGGGATGGTCTATGGACTAGGT	59.202	50.000	9.27	0.00	41.82	3.08
2626	4073	3.436243	GAGGGATGGTCTATGGACTAGG	58.564	54.545	9.27	0.00	41.82	3.02
2627	4074	3.085533	CGAGGGATGGTCTATGGACTAG	58.914	54.545	9.27	0.00	41.82	2.57
2628	4075	2.445905	ACGAGGGATGGTCTATGGACTA	59.554	50.000	9.27	3.10	41.82	2.59
2629	4076	1.218196	ACGAGGGATGGTCTATGGACT	59.782	52.381	9.27	0.00	41.82	3.85
2630	4077	1.705873	ACGAGGGATGGTCTATGGAC	58.294	55.000	0.00	0.00	41.43	4.02
2631	4078	2.812983	CGTACGAGGGATGGTCTATGGA	60.813	54.545	10.44	0.00	0.00	3.41
2632	4079	1.540267	CGTACGAGGGATGGTCTATGG	59.460	57.143	10.44	0.00	0.00	2.74
2633	4080	1.068472	GCGTACGAGGGATGGTCTATG	60.068	57.143	21.65	0.00	0.00	2.23
2634	4081	1.245732	GCGTACGAGGGATGGTCTAT	58.754	55.000	21.65	0.00	0.00	1.98
2635	4082	0.820891	GGCGTACGAGGGATGGTCTA	60.821	60.000	21.65	0.00	0.00	2.59
2636	4083	2.125961	GGCGTACGAGGGATGGTCT	61.126	63.158	21.65	0.00	0.00	3.85
2637	4084	2.416260	GGCGTACGAGGGATGGTC	59.584	66.667	21.65	0.00	0.00	4.02
2638	4085	3.152400	GGGCGTACGAGGGATGGT	61.152	66.667	21.65	0.00	0.00	3.55
2639	4086	3.151710	TGGGCGTACGAGGGATGG	61.152	66.667	21.65	0.00	0.00	3.51
2640	4087	1.956629	AAGTGGGCGTACGAGGGATG	61.957	60.000	21.65	0.00	0.00	3.51
2641	4088	0.396139	TAAGTGGGCGTACGAGGGAT	60.396	55.000	21.65	2.24	0.00	3.85
2642	4089	1.001020	TAAGTGGGCGTACGAGGGA	60.001	57.895	21.65	0.00	0.00	4.20
2643	4090	1.140375	GTAAGTGGGCGTACGAGGG	59.860	63.158	21.65	0.00	0.00	4.30
2644	4091	0.529378	AAGTAAGTGGGCGTACGAGG	59.471	55.000	21.65	0.00	35.28	4.63
2645	4092	2.094854	AGAAAGTAAGTGGGCGTACGAG	60.095	50.000	21.65	0.00	35.28	4.18
2646	4093	1.888512	AGAAAGTAAGTGGGCGTACGA	59.111	47.619	21.65	0.00	35.28	3.43
2647	4094	1.990563	CAGAAAGTAAGTGGGCGTACG	59.009	52.381	11.84	11.84	35.28	3.67
2648	4095	1.730612	GCAGAAAGTAAGTGGGCGTAC	59.269	52.381	0.00	0.00	0.00	3.67
2649	4096	1.338389	GGCAGAAAGTAAGTGGGCGTA	60.338	52.381	0.00	0.00	0.00	4.42
2650	4097	0.605589	GGCAGAAAGTAAGTGGGCGT	60.606	55.000	0.00	0.00	0.00	5.68
2651	4098	0.605319	TGGCAGAAAGTAAGTGGGCG	60.605	55.000	0.00	0.00	0.00	6.13
2652	4099	1.616159	TTGGCAGAAAGTAAGTGGGC	58.384	50.000	0.00	0.00	0.00	5.36
2653	4100	4.843728	TCTATTGGCAGAAAGTAAGTGGG	58.156	43.478	0.00	0.00	0.00	4.61
2654	4101	5.220931	GCATCTATTGGCAGAAAGTAAGTGG	60.221	44.000	0.00	0.00	0.00	4.00
2655	4102	5.355071	TGCATCTATTGGCAGAAAGTAAGTG	59.645	40.000	0.00	0.00	34.58	3.16
2656	4103	5.500234	TGCATCTATTGGCAGAAAGTAAGT	58.500	37.500	0.00	0.00	34.58	2.24
2657	4104	6.441093	TTGCATCTATTGGCAGAAAGTAAG	57.559	37.500	0.00	0.00	41.68	2.34
2658	4105	6.832520	TTTGCATCTATTGGCAGAAAGTAA	57.167	33.333	0.00	0.00	41.68	2.24
2659	4106	6.681120	GCATTTGCATCTATTGGCAGAAAGTA	60.681	38.462	0.00	0.00	41.68	2.24
2660	4107	5.657474	CATTTGCATCTATTGGCAGAAAGT	58.343	37.500	0.00	0.00	41.68	2.66
2686	4133	4.160626	AGTGCAAGTAGGTATCTTCAGGAC	59.839	45.833	0.00	0.00	0.00	3.85
2721	4168	2.618709	CGAATACCAAGCCCAGAAATCC	59.381	50.000	0.00	0.00	0.00	3.01
2740	4187	1.415672	AACCTGCCCTTTCTGTCCGA	61.416	55.000	0.00	0.00	0.00	4.55
2784	4232	5.008613	TCTCTGCAGCTTCGTTTTTAACAAT	59.991	36.000	9.47	0.00	0.00	2.71
2800	4248	3.256879	TGTAACCACTCTTCTCTCTGCAG	59.743	47.826	7.63	7.63	0.00	4.41
2861	4309	1.757306	CACAAGGAGCACCAGGACT	59.243	57.895	2.07	0.00	38.94	3.85
2884	4332	6.150396	TCTGATCTTCGAGGGAATCTTTAC	57.850	41.667	0.00	0.00	0.00	2.01
2907	4355	3.144506	CATCAGCCGCCATAAGAAGATT	58.855	45.455	0.00	0.00	0.00	2.40
2926	4374	0.186873	GGGAGTGAATGATGGGGCAT	59.813	55.000	0.00	0.00	0.00	4.40
2927	4375	0.920763	AGGGAGTGAATGATGGGGCA	60.921	55.000	0.00	0.00	0.00	5.36
2928	4376	1.140312	TAGGGAGTGAATGATGGGGC	58.860	55.000	0.00	0.00	0.00	5.80
2929	4377	1.421646	GGTAGGGAGTGAATGATGGGG	59.578	57.143	0.00	0.00	0.00	4.96
3073	4521	1.003116	GCGCTGAACCATCACATCATC	60.003	52.381	0.00	0.00	0.00	2.92
3144	4592	2.349249	GCTCGCTTGATCCAATTCATCG	60.349	50.000	0.00	0.00	0.00	3.84
3181	4629	4.744795	ACCATATGGACAAGAGAGTGAC	57.255	45.455	28.77	0.00	38.94	3.67
3191	4639	4.783764	CGTCTAGCATACCATATGGACA	57.216	45.455	28.77	15.28	38.94	4.02
3271	4719	3.778075	TGCCCCAGTTCTGCTATAAAGTA	59.222	43.478	0.00	0.00	0.00	2.24

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.