Multiple sequence alignment - TraesCS2D01G100200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G100200 chr2D 100.000 4952 0 0 1 4952 52225991 52230942 0.000000e+00 9145
1 TraesCS2D01G100200 chr2A 89.382 5095 266 117 1 4952 53781370 53786332 0.000000e+00 6157
2 TraesCS2D01G100200 chr2B 90.230 2047 84 47 381 2369 81754691 81756679 0.000000e+00 2566
3 TraesCS2D01G100200 chr2B 90.855 1673 68 33 3319 4952 81757948 81759574 0.000000e+00 2163
4 TraesCS2D01G100200 chr2B 90.598 819 56 15 2441 3239 81756918 81757735 0.000000e+00 1066
5 TraesCS2D01G100200 chr2B 91.045 201 10 3 1 194 81754473 81754672 1.060000e-66 265
6 TraesCS2D01G100200 chr4B 94.248 226 12 1 1335 1559 382692079 382692304 1.320000e-90 344
7 TraesCS2D01G100200 chr4D 93.860 228 13 1 1335 1561 306795482 306795709 4.750000e-90 342
8 TraesCS2D01G100200 chr4A 93.363 226 14 1 1335 1559 170710869 170710644 2.860000e-87 333
9 TraesCS2D01G100200 chr3B 91.089 202 16 2 1349 1549 56055981 56056181 6.320000e-69 272
10 TraesCS2D01G100200 chr3D 90.099 202 18 2 1349 1549 33294996 33295196 1.370000e-65 261
11 TraesCS2D01G100200 chr3A 89.552 201 21 0 1349 1549 45776244 45776444 6.360000e-64 255
12 TraesCS2D01G100200 chr3A 79.310 174 34 2 1353 1525 465225766 465225938 2.420000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G100200 chr2D 52225991 52230942 4951 False 9145 9145 100.000 1 4952 1 chr2D.!!$F1 4951
1 TraesCS2D01G100200 chr2A 53781370 53786332 4962 False 6157 6157 89.382 1 4952 1 chr2A.!!$F1 4951
2 TraesCS2D01G100200 chr2B 81754473 81759574 5101 False 1515 2566 90.682 1 4952 4 chr2B.!!$F1 4951

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
213 234 0.111832 TAGAGGAGTGACCACCGTGT 59.888 55.000 0.00 0.0 42.04 4.49 F
224 245 0.179073 CCACCGTGTCTGGGATCATC 60.179 60.000 0.00 0.0 0.00 2.92 F
682 720 0.304098 CGTAGGTAGCTCCTTCGTCG 59.696 60.000 17.13 10.9 46.91 5.12 F
819 872 0.853530 AAGGGAGGGCAAGTTCAACT 59.146 50.000 0.00 0.0 0.00 3.16 F
1123 1203 1.224592 GGCTGAATCACCACCCGAT 59.775 57.895 0.00 0.0 0.00 4.18 F
2636 2961 1.334556 GTGCAAACATGCTGTCTCACA 59.665 47.619 2.22 0.0 35.49 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1188 1275 0.321122 AAGACAGAAGCTTCGGGCAG 60.321 55.000 30.39 16.81 44.79 4.85 R
1831 1923 2.033141 AGAGAACGACGACCCGGA 59.967 61.111 0.73 0.00 0.00 5.14 R
2469 2789 1.086696 GACTTGCGCATGCCTCTTTA 58.913 50.000 21.93 0.00 41.78 1.85 R
2712 3079 4.101898 TGGAGCTTGTTTTAGTACCAGTCA 59.898 41.667 0.00 0.00 0.00 3.41 R
2962 3335 0.321387 ATCAGCTATCTGGCATGGCG 60.321 55.000 15.27 9.60 40.69 5.69 R
4540 5097 0.107081 AACGTTTGGTGGATCGGTCA 59.893 50.000 0.00 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 80 7.112565 GCTGAATATACACAAAATGAAGATGCG 59.887 37.037 0.00 0.00 0.00 4.73
83 91 6.663944 AAATGAAGATGCGGTACTAAGTTC 57.336 37.500 0.00 0.00 0.00 3.01
113 121 1.271871 TGGAGGCAACAATGTGGTAGG 60.272 52.381 0.00 0.00 41.41 3.18
136 144 2.764572 TGGTACTAAGGGCAACTCTAGC 59.235 50.000 0.00 0.00 0.00 3.42
153 161 4.709250 TCTAGCAGAGTCGTCATATCTGT 58.291 43.478 3.63 0.00 41.99 3.41
208 229 3.402628 TGCTTTTAGAGGAGTGACCAC 57.597 47.619 0.00 0.00 42.04 4.16
210 231 2.931320 GCTTTTAGAGGAGTGACCACCG 60.931 54.545 0.00 0.00 42.04 4.94
213 234 0.111832 TAGAGGAGTGACCACCGTGT 59.888 55.000 0.00 0.00 42.04 4.49
214 235 1.179814 AGAGGAGTGACCACCGTGTC 61.180 60.000 0.00 0.00 42.04 3.67
215 236 1.152525 AGGAGTGACCACCGTGTCT 60.153 57.895 0.00 0.00 42.04 3.41
216 237 1.006102 GGAGTGACCACCGTGTCTG 60.006 63.158 0.00 0.00 38.79 3.51
217 238 1.006102 GAGTGACCACCGTGTCTGG 60.006 63.158 0.00 0.00 36.21 3.86
218 239 2.030562 GTGACCACCGTGTCTGGG 59.969 66.667 0.00 0.00 36.21 4.45
219 240 2.123208 TGACCACCGTGTCTGGGA 60.123 61.111 0.00 0.00 36.21 4.37
221 242 1.218316 GACCACCGTGTCTGGGATC 59.782 63.158 0.00 0.00 32.45 3.36
222 243 1.535444 ACCACCGTGTCTGGGATCA 60.535 57.895 0.00 0.00 32.45 2.92
223 244 0.909610 ACCACCGTGTCTGGGATCAT 60.910 55.000 0.00 0.00 32.45 2.45
224 245 0.179073 CCACCGTGTCTGGGATCATC 60.179 60.000 0.00 0.00 0.00 2.92
259 280 1.204113 CCCTCCATATCTGGCCTCCC 61.204 65.000 3.32 0.00 42.80 4.30
260 281 0.474466 CCTCCATATCTGGCCTCCCA 60.474 60.000 3.32 0.00 42.80 4.37
275 296 2.239654 CCTCCCAGTTGTCATACATGGT 59.760 50.000 0.00 0.00 0.00 3.55
281 302 5.487433 CCAGTTGTCATACATGGTAACTCA 58.513 41.667 0.00 0.00 34.52 3.41
284 305 5.483937 AGTTGTCATACATGGTAACTCAGGA 59.516 40.000 0.00 0.00 32.78 3.86
288 309 5.023452 TCATACATGGTAACTCAGGACTGT 58.977 41.667 0.00 0.00 37.61 3.55
320 341 3.561310 CGCACTTCATATGGCAGTTACAT 59.439 43.478 2.13 0.00 0.00 2.29
321 342 4.553351 CGCACTTCATATGGCAGTTACATG 60.553 45.833 2.13 0.00 0.00 3.21
324 345 6.293081 GCACTTCATATGGCAGTTACATGTAG 60.293 42.308 5.56 0.00 0.00 2.74
353 374 6.497437 CATGTGACATGAAGAAAACTTCACA 58.503 36.000 20.38 11.06 44.79 3.58
356 377 5.848036 GTGACATGAAGAAAACTTCACATCG 59.152 40.000 13.57 6.82 44.79 3.84
360 381 4.703897 TGAAGAAAACTTCACATCGTCCT 58.296 39.130 8.32 0.00 38.30 3.85
361 382 4.750098 TGAAGAAAACTTCACATCGTCCTC 59.250 41.667 8.32 0.00 38.30 3.71
367 388 1.945354 TTCACATCGTCCTCCGCCTC 61.945 60.000 0.00 0.00 36.19 4.70
369 390 1.758514 ACATCGTCCTCCGCCTCAT 60.759 57.895 0.00 0.00 36.19 2.90
423 444 0.918310 AGAAGGAGCTGGAGGCCAAT 60.918 55.000 5.01 0.00 43.05 3.16
439 474 2.095919 GCCAATGTTGTTCCACTCGTAC 60.096 50.000 0.00 0.00 0.00 3.67
481 516 3.584406 ACTCACATTTCGAGACCAGAG 57.416 47.619 0.00 5.17 34.47 3.35
509 544 5.622770 AAAAGGAATGTACCATTGACGAC 57.377 39.130 0.00 0.00 0.00 4.34
540 578 4.738740 CGGTTATGGAGTGAACGATTAGAC 59.261 45.833 0.00 0.00 0.00 2.59
552 590 6.910433 GTGAACGATTAGACATTTGTGTGTTT 59.090 34.615 0.00 0.00 31.16 2.83
561 599 6.068010 AGACATTTGTGTGTTTCCCTCATAA 58.932 36.000 0.00 0.00 31.16 1.90
601 639 7.734942 TGAAGCACAGTACATATCCAATATGA 58.265 34.615 12.63 0.00 44.19 2.15
644 682 7.561021 CTCTACTAGAGTTGCTCTATGTTGA 57.439 40.000 6.36 10.72 41.49 3.18
661 699 8.512956 TCTATGTTGACTACAGTTACTTCACTC 58.487 37.037 0.00 0.00 40.83 3.51
682 720 0.304098 CGTAGGTAGCTCCTTCGTCG 59.696 60.000 17.13 10.90 46.91 5.12
695 733 3.057736 TCCTTCGTCGGAGAACAAACTAG 60.058 47.826 0.79 0.00 39.69 2.57
699 737 2.978489 CGTCGGAGAACAAACTAGTGTC 59.022 50.000 0.00 0.00 39.69 3.67
711 749 3.834447 TAGTGTCACACGCGCGCTT 62.834 57.895 32.58 18.79 39.64 4.68
749 793 3.697542 ACCGGCATACCCTTTTCATTAAC 59.302 43.478 0.00 0.00 0.00 2.01
762 806 8.911662 CCCTTTTCATTAACAACTGAAATAACG 58.088 33.333 3.47 0.00 40.13 3.18
807 852 2.861147 AAGGAGACGAAAAAGGGAGG 57.139 50.000 0.00 0.00 0.00 4.30
819 872 0.853530 AAGGGAGGGCAAGTTCAACT 59.146 50.000 0.00 0.00 0.00 3.16
829 882 1.772063 AAGTTCAACTCACCACGCGC 61.772 55.000 5.73 0.00 0.00 6.86
1024 1104 3.698820 ACGGCTGGAACGGTACCC 61.699 66.667 6.25 0.00 36.83 3.69
1120 1200 2.438434 CCGGCTGAATCACCACCC 60.438 66.667 0.00 0.00 0.00 4.61
1121 1201 2.819595 CGGCTGAATCACCACCCG 60.820 66.667 0.00 0.00 0.00 5.28
1122 1202 2.668632 GGCTGAATCACCACCCGA 59.331 61.111 0.00 0.00 0.00 5.14
1123 1203 1.224592 GGCTGAATCACCACCCGAT 59.775 57.895 0.00 0.00 0.00 4.18
1188 1275 4.456019 CGCGATCGACACTATATATAGCC 58.544 47.826 21.57 8.09 38.10 3.93
1704 1796 2.124693 CAGCTCGTCCTCCTCCTCC 61.125 68.421 0.00 0.00 0.00 4.30
1710 1802 1.454295 GTCCTCCTCCTCCTCGTCC 60.454 68.421 0.00 0.00 0.00 4.79
1764 1856 2.662596 GACATGGACCAGTGCGGA 59.337 61.111 0.00 0.00 38.63 5.54
1973 2070 4.338879 CTCCCAAGTTCTCAACCATGAAT 58.661 43.478 0.00 0.00 34.49 2.57
2008 2105 3.419264 TGCATGCAAGCTAATTTACGG 57.581 42.857 20.30 0.00 34.99 4.02
2057 2155 2.134201 TGATCGGTCGATGGAATTCG 57.866 50.000 10.77 0.00 40.46 3.34
2067 2188 4.033014 GTCGATGGAATTCGTTCTTCTTCC 59.967 45.833 0.00 0.00 40.03 3.46
2144 2266 7.446625 ACCTCTTGTTTGGATCATAATATCAGC 59.553 37.037 0.00 0.00 0.00 4.26
2290 2412 3.340034 ACTTTTGGATCATCGCCGTAAA 58.660 40.909 0.00 0.00 0.00 2.01
2291 2413 3.754323 ACTTTTGGATCATCGCCGTAAAA 59.246 39.130 0.00 0.00 0.00 1.52
2627 2952 6.275335 ACCATTAATCTATGTGCAAACATGC 58.725 36.000 1.65 0.00 0.00 4.06
2636 2961 1.334556 GTGCAAACATGCTGTCTCACA 59.665 47.619 2.22 0.00 35.49 3.58
2643 2968 6.366877 GCAAACATGCTGTCTCACATTAAAAT 59.633 34.615 0.00 0.00 0.00 1.82
2719 3086 8.818622 TGAAATGTACTACTAGTATGACTGGT 57.181 34.615 2.33 1.15 42.72 4.00
2720 3087 9.910267 TGAAATGTACTACTAGTATGACTGGTA 57.090 33.333 2.33 3.27 40.52 3.25
2722 3089 9.917887 AAATGTACTACTAGTATGACTGGTACT 57.082 33.333 20.04 9.63 40.52 2.73
2728 3095 9.745018 ACTACTAGTATGACTGGTACTAAAACA 57.255 33.333 2.33 0.00 40.52 2.83
2758 3128 2.112815 GGATGGGTGTGGCGCTTAC 61.113 63.158 7.64 7.95 0.00 2.34
2782 3153 8.209917 ACTTAACTGTACTAATTTAGCCATGC 57.790 34.615 3.28 0.00 0.00 4.06
2819 3190 7.524717 AAGTTTGTAACCACATTCTATGCTT 57.475 32.000 0.00 0.00 33.76 3.91
2821 3192 6.714810 AGTTTGTAACCACATTCTATGCTTCA 59.285 34.615 0.00 0.00 33.76 3.02
2879 3252 4.201637 CGCGTGCATGTGTACTATGTTAAA 60.202 41.667 11.42 0.00 0.00 1.52
2914 3287 6.096141 TCTGAATTTTCCACAACAAACAGCTA 59.904 34.615 0.00 0.00 0.00 3.32
2957 3330 2.548057 ACACATTAGCGCGAATATTGGG 59.452 45.455 15.58 9.10 0.00 4.12
2962 3335 4.025401 CGCGAATATTGGGGGCGC 62.025 66.667 0.00 0.00 43.78 6.53
2963 3336 4.025401 GCGAATATTGGGGGCGCG 62.025 66.667 0.00 0.00 38.24 6.86
3235 3608 2.613133 GCTACTACCTGGTCAGTACTCG 59.387 54.545 0.63 0.78 0.00 4.18
3239 3612 1.831580 ACCTGGTCAGTACTCGGTAC 58.168 55.000 0.00 6.19 39.10 3.34
3241 3614 2.015587 CCTGGTCAGTACTCGGTACTC 58.984 57.143 12.13 4.75 44.86 2.59
3242 3615 2.617276 CCTGGTCAGTACTCGGTACTCA 60.617 54.545 12.13 8.13 44.86 3.41
3243 3616 2.419324 CTGGTCAGTACTCGGTACTCAC 59.581 54.545 12.13 10.46 44.86 3.51
3244 3617 2.039480 TGGTCAGTACTCGGTACTCACT 59.961 50.000 14.42 0.00 44.86 3.41
3245 3618 3.261643 TGGTCAGTACTCGGTACTCACTA 59.738 47.826 14.42 8.47 44.86 2.74
3246 3619 3.620821 GGTCAGTACTCGGTACTCACTAC 59.379 52.174 14.42 10.21 44.86 2.73
3247 3620 4.502962 GTCAGTACTCGGTACTCACTACT 58.497 47.826 12.13 0.00 44.86 2.57
3248 3621 4.566360 GTCAGTACTCGGTACTCACTACTC 59.434 50.000 12.13 0.00 44.86 2.59
3249 3622 4.221482 TCAGTACTCGGTACTCACTACTCA 59.779 45.833 12.13 0.00 44.86 3.41
3250 3623 4.567558 CAGTACTCGGTACTCACTACTCAG 59.432 50.000 12.13 0.00 44.86 3.35
3251 3624 3.699411 ACTCGGTACTCACTACTCAGT 57.301 47.619 0.00 0.00 34.42 3.41
3252 3625 4.815533 ACTCGGTACTCACTACTCAGTA 57.184 45.455 0.00 0.00 32.21 2.74
3253 3626 4.757594 ACTCGGTACTCACTACTCAGTAG 58.242 47.826 10.55 10.55 41.43 2.57
3254 3627 3.529533 TCGGTACTCACTACTCAGTAGC 58.470 50.000 12.11 0.00 39.51 3.58
3255 3628 3.055602 TCGGTACTCACTACTCAGTAGCA 60.056 47.826 12.11 0.00 41.65 3.49
3256 3629 3.063725 CGGTACTCACTACTCAGTAGCAC 59.936 52.174 12.11 2.72 41.65 4.40
3257 3630 4.008330 GGTACTCACTACTCAGTAGCACA 58.992 47.826 12.11 0.00 41.35 4.57
3258 3631 4.142643 GGTACTCACTACTCAGTAGCACAC 60.143 50.000 12.11 3.38 41.35 3.82
3259 3632 2.820787 ACTCACTACTCAGTAGCACACC 59.179 50.000 12.11 0.00 39.51 4.16
3260 3633 1.810755 TCACTACTCAGTAGCACACCG 59.189 52.381 12.11 0.00 39.51 4.94
3261 3634 1.135373 CACTACTCAGTAGCACACCGG 60.135 57.143 12.11 0.00 39.51 5.28
3262 3635 0.179134 CTACTCAGTAGCACACCGGC 60.179 60.000 0.00 0.00 29.12 6.13
3263 3636 0.896479 TACTCAGTAGCACACCGGCA 60.896 55.000 0.00 0.00 35.83 5.69
3268 3641 1.671054 GTAGCACACCGGCACACAT 60.671 57.895 0.00 0.00 35.83 3.21
3286 3659 3.110027 TGCTGAAAATGCATGCACG 57.890 47.368 25.37 8.42 35.31 5.34
3290 3663 4.912121 TGCTGAAAATGCATGCACGTAGT 61.912 43.478 25.37 3.10 36.89 2.73
3291 3664 3.181511 GCTGAAAATGCATGCACGTAGTA 60.182 43.478 25.37 7.35 41.61 1.82
3292 3665 4.496341 GCTGAAAATGCATGCACGTAGTAT 60.496 41.667 25.37 1.29 41.61 2.12
3293 3666 5.277297 GCTGAAAATGCATGCACGTAGTATA 60.277 40.000 25.37 4.11 41.61 1.47
3294 3667 6.566564 GCTGAAAATGCATGCACGTAGTATAT 60.567 38.462 25.37 0.00 41.61 0.86
3295 3668 6.657888 TGAAAATGCATGCACGTAGTATATG 58.342 36.000 25.37 0.00 41.61 1.78
3296 3669 6.481644 TGAAAATGCATGCACGTAGTATATGA 59.518 34.615 25.37 0.00 41.61 2.15
3298 3671 5.845985 ATGCATGCACGTAGTATATGAAC 57.154 39.130 25.37 0.00 41.61 3.18
3305 3678 5.106078 TGCACGTAGTATATGAACAGACACA 60.106 40.000 0.00 0.00 41.61 3.72
3312 3685 7.055667 AGTATATGAACAGACACATCCGATT 57.944 36.000 0.00 0.00 0.00 3.34
3322 3852 8.142994 ACAGACACATCCGATTAACATTAATC 57.857 34.615 12.49 12.49 43.41 1.75
3372 3902 6.147164 TGTTGTCTTGTAATTTCCTGACGATC 59.853 38.462 0.00 0.00 0.00 3.69
3410 3940 2.717639 ATTAATCGAGCTGGCTGGTT 57.282 45.000 0.00 0.00 0.00 3.67
3412 3942 0.613260 TAATCGAGCTGGCTGGTTGT 59.387 50.000 10.14 0.00 0.00 3.32
3431 3961 5.814705 GGTTGTTGATTGGTGTGAAATTTGA 59.185 36.000 0.00 0.00 0.00 2.69
3631 4164 1.153706 ATGCCTGTACGTACGTGCC 60.154 57.895 30.25 19.99 0.00 5.01
3639 4172 1.911293 TACGTACGTGCCTGGTCGAC 61.911 60.000 30.25 7.13 0.00 4.20
3703 4236 0.536233 CACCATGTGTCCGGTCCAAA 60.536 55.000 0.00 0.00 31.41 3.28
3730 4263 9.605275 CATATATCCACCTATGTAATCAACCAG 57.395 37.037 0.00 0.00 0.00 4.00
3731 4264 5.975988 ATCCACCTATGTAATCAACCAGT 57.024 39.130 0.00 0.00 0.00 4.00
3735 4268 5.354234 CCACCTATGTAATCAACCAGTCAAC 59.646 44.000 0.00 0.00 0.00 3.18
3775 4309 3.378112 ACTGTCACTGTGAACAACATTGG 59.622 43.478 12.81 3.51 39.34 3.16
3788 4322 4.843728 ACAACATTGGAACCGATGATAGT 58.156 39.130 23.14 15.68 39.55 2.12
3810 4344 6.461640 AGTGTGTAGCGTAGTCCTAAATTTT 58.538 36.000 0.00 0.00 0.00 1.82
3916 4452 8.296000 CAGATAATACTACAGAGGAGATGTGTG 58.704 40.741 0.00 0.00 35.86 3.82
3937 4473 1.739466 CTGTTTCTGCATGGCACGTAT 59.261 47.619 0.00 0.00 33.79 3.06
3974 4512 2.960129 CATCGCCGAACCGTAGCC 60.960 66.667 0.00 0.00 0.00 3.93
3999 4540 1.048724 TAGGTGCAGAGATTCCCCGG 61.049 60.000 0.00 0.00 0.00 5.73
4123 4670 3.492309 GCACACATGTCATTTTCCACCAA 60.492 43.478 0.00 0.00 0.00 3.67
4420 4977 8.988064 AGTACTATATGTGTCAGTCAAACTTG 57.012 34.615 0.00 0.00 0.00 3.16
4493 5050 0.520847 GAGCTTTGACTGCTTCTGCC 59.479 55.000 0.00 0.00 41.30 4.85
4535 5092 0.457443 GGGTTGCATCAAAGCTAGCC 59.543 55.000 12.13 3.20 46.89 3.93
4540 5097 1.213678 TGCATCAAAGCTAGCCAGGAT 59.786 47.619 12.13 8.89 34.99 3.24
4541 5098 1.607628 GCATCAAAGCTAGCCAGGATG 59.392 52.381 24.66 24.66 36.20 3.51
4542 5099 2.747467 GCATCAAAGCTAGCCAGGATGA 60.747 50.000 29.49 19.70 39.69 2.92
4570 5139 4.457603 TCCACCAAACGTTATTCATTCAGG 59.542 41.667 0.00 0.00 0.00 3.86
4589 5159 2.298163 AGGAAGAGGCAAAAATGCACTG 59.702 45.455 2.97 0.00 36.33 3.66
4605 5175 2.283298 CACTGAACCTCCAATGGATCG 58.717 52.381 0.87 0.00 32.39 3.69
4620 5198 1.916000 GGATCGACCAAACGTTACTCG 59.084 52.381 0.00 8.47 41.11 4.18
4643 5221 2.559668 TCAGAAGAGGCAAAAATGCAGG 59.440 45.455 2.97 0.00 36.33 4.85
4645 5223 2.824341 AGAAGAGGCAAAAATGCAGGAG 59.176 45.455 2.97 0.00 36.33 3.69
4646 5224 2.592102 AGAGGCAAAAATGCAGGAGA 57.408 45.000 2.97 0.00 36.33 3.71
4647 5225 2.880443 AGAGGCAAAAATGCAGGAGAA 58.120 42.857 2.97 0.00 36.33 2.87
4648 5226 2.560105 AGAGGCAAAAATGCAGGAGAAC 59.440 45.455 2.97 0.00 36.33 3.01
4649 5227 2.297033 GAGGCAAAAATGCAGGAGAACA 59.703 45.455 2.97 0.00 36.33 3.18
4692 5270 4.013050 TGACAGTGAGAGTGATCTAGTGG 58.987 47.826 0.00 0.00 0.00 4.00
4707 5285 2.656947 AGTGGCAGGCTTTTTACAGA 57.343 45.000 0.00 0.00 0.00 3.41
4711 5289 2.230660 GGCAGGCTTTTTACAGACAGT 58.769 47.619 0.00 0.00 0.00 3.55
4712 5290 2.030805 GGCAGGCTTTTTACAGACAGTG 60.031 50.000 0.00 0.00 0.00 3.66
4787 5380 4.812626 AGCAAGCATTTTCAGGAACAAAAG 59.187 37.500 0.00 0.00 0.00 2.27
4790 5383 6.292328 GCAAGCATTTTCAGGAACAAAAGTAC 60.292 38.462 0.00 0.00 0.00 2.73
4812 5405 1.461127 CGTTTCAGTGGCAGAGTTAGC 59.539 52.381 0.00 0.00 0.00 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 74 5.408604 CACAAAAGAACTTAGTACCGCATCT 59.591 40.000 0.00 0.00 0.00 2.90
72 80 5.818857 TCCACACACAAAAGAACTTAGTACC 59.181 40.000 0.00 0.00 0.00 3.34
83 91 1.476085 TGTTGCCTCCACACACAAAAG 59.524 47.619 0.00 0.00 0.00 2.27
113 121 1.907255 AGAGTTGCCCTTAGTACCACC 59.093 52.381 0.00 0.00 0.00 4.61
136 144 2.872858 TCGGACAGATATGACGACTCTG 59.127 50.000 7.56 0.00 41.69 3.35
153 161 1.614903 ACGGTTATTATGGCGATCGGA 59.385 47.619 18.30 0.00 0.00 4.55
204 225 0.909610 ATGATCCCAGACACGGTGGT 60.910 55.000 13.48 0.00 32.62 4.16
208 229 1.029681 TACGATGATCCCAGACACGG 58.970 55.000 0.00 0.00 0.00 4.94
210 231 6.147821 CCATAAATTACGATGATCCCAGACAC 59.852 42.308 0.00 0.00 0.00 3.67
213 234 6.270000 AGTCCATAAATTACGATGATCCCAGA 59.730 38.462 0.00 0.00 0.00 3.86
214 235 6.369890 CAGTCCATAAATTACGATGATCCCAG 59.630 42.308 0.00 0.00 0.00 4.45
215 236 6.230472 CAGTCCATAAATTACGATGATCCCA 58.770 40.000 0.00 0.00 0.00 4.37
216 237 5.122396 GCAGTCCATAAATTACGATGATCCC 59.878 44.000 0.00 0.00 0.00 3.85
217 238 5.122396 GGCAGTCCATAAATTACGATGATCC 59.878 44.000 0.00 0.00 0.00 3.36
218 239 5.122396 GGGCAGTCCATAAATTACGATGATC 59.878 44.000 0.00 0.00 35.00 2.92
219 240 5.003804 GGGCAGTCCATAAATTACGATGAT 58.996 41.667 0.00 0.00 35.00 2.45
221 242 4.389374 AGGGCAGTCCATAAATTACGATG 58.611 43.478 0.00 0.00 38.24 3.84
222 243 4.505039 GGAGGGCAGTCCATAAATTACGAT 60.505 45.833 0.00 0.00 36.51 3.73
223 244 3.181458 GGAGGGCAGTCCATAAATTACGA 60.181 47.826 0.00 0.00 36.51 3.43
224 245 3.139077 GGAGGGCAGTCCATAAATTACG 58.861 50.000 0.00 0.00 36.51 3.18
259 280 5.582269 CCTGAGTTACCATGTATGACAACTG 59.418 44.000 12.63 3.94 34.20 3.16
260 281 5.483937 TCCTGAGTTACCATGTATGACAACT 59.516 40.000 9.39 9.39 35.64 3.16
275 296 5.057149 GCTTCAAAAGACAGTCCTGAGTTA 58.943 41.667 0.40 0.00 0.00 2.24
281 302 1.230324 GCGCTTCAAAAGACAGTCCT 58.770 50.000 0.00 0.00 0.00 3.85
284 305 1.668419 AGTGCGCTTCAAAAGACAGT 58.332 45.000 9.73 0.00 0.00 3.55
320 341 5.490159 TCTTCATGTCACATGCAATCTACA 58.510 37.500 13.41 0.00 0.00 2.74
321 342 6.426980 TTCTTCATGTCACATGCAATCTAC 57.573 37.500 13.41 0.00 0.00 2.59
324 345 6.154445 AGTTTTCTTCATGTCACATGCAATC 58.846 36.000 13.41 3.13 0.00 2.67
356 377 0.755698 TCCTACATGAGGCGGAGGAC 60.756 60.000 0.00 0.00 46.25 3.85
360 381 0.398522 ACCATCCTACATGAGGCGGA 60.399 55.000 18.02 10.86 46.25 5.54
361 382 1.273606 CTACCATCCTACATGAGGCGG 59.726 57.143 0.00 8.49 46.25 6.13
367 388 4.443457 CCAACCTCACTACCATCCTACATG 60.443 50.000 0.00 0.00 0.00 3.21
369 390 3.104512 CCAACCTCACTACCATCCTACA 58.895 50.000 0.00 0.00 0.00 2.74
423 444 2.313317 AGAGGTACGAGTGGAACAACA 58.687 47.619 0.00 0.00 44.16 3.33
439 474 8.621286 TGAGTTAAGCTTTAAACAAAGAAGAGG 58.379 33.333 3.20 0.00 31.58 3.69
509 544 0.456221 ACTCCATAACCGCGAGTCAG 59.544 55.000 8.23 0.00 31.15 3.51
540 578 7.161773 AGATTATGAGGGAAACACACAAATG 57.838 36.000 0.00 0.00 0.00 2.32
561 599 8.606754 ACTGTGCTTCATATAGATATGGAGAT 57.393 34.615 18.38 0.00 45.33 2.75
593 631 5.336213 GGCATATTGACAGCCTTCATATTGG 60.336 44.000 0.00 0.00 44.92 3.16
639 677 5.516996 CGAGTGAAGTAACTGTAGTCAACA 58.483 41.667 0.00 0.00 36.42 3.33
644 682 2.551459 ACGCGAGTGAAGTAACTGTAGT 59.449 45.455 15.93 0.00 46.97 2.73
682 720 3.489785 CGTGTGACACTAGTTTGTTCTCC 59.510 47.826 14.42 0.00 31.34 3.71
695 733 3.399770 TAAGCGCGCGTGTGACAC 61.400 61.111 32.35 12.72 0.00 3.67
699 737 1.955529 ATTGAGTAAGCGCGCGTGTG 61.956 55.000 32.35 4.87 0.00 3.82
727 765 2.525105 AATGAAAAGGGTATGCCGGT 57.475 45.000 1.90 0.00 34.97 5.28
728 766 3.697045 TGTTAATGAAAAGGGTATGCCGG 59.303 43.478 0.00 0.00 34.97 6.13
729 767 4.974368 TGTTAATGAAAAGGGTATGCCG 57.026 40.909 0.00 0.00 34.97 5.69
730 768 6.071616 TCAGTTGTTAATGAAAAGGGTATGCC 60.072 38.462 0.00 0.00 0.00 4.40
731 769 6.919721 TCAGTTGTTAATGAAAAGGGTATGC 58.080 36.000 0.00 0.00 0.00 3.14
767 811 8.337118 TCCTTTCTCTGGTTATGGATAGATTT 57.663 34.615 0.00 0.00 0.00 2.17
789 834 0.984995 CCCTCCCTTTTTCGTCTCCT 59.015 55.000 0.00 0.00 0.00 3.69
807 852 0.307760 CGTGGTGAGTTGAACTTGCC 59.692 55.000 0.00 5.77 0.00 4.52
819 872 0.666274 CTGAGTTAAGCGCGTGGTGA 60.666 55.000 8.43 0.00 0.00 4.02
829 882 3.390135 TGGAGCGTTGAACTGAGTTAAG 58.610 45.455 0.00 0.00 0.00 1.85
1025 1105 4.704833 TGTCAGCTTGGCGCCTCC 62.705 66.667 29.70 15.50 40.39 4.30
1026 1106 3.426568 GTGTCAGCTTGGCGCCTC 61.427 66.667 29.70 16.55 40.39 4.70
1120 1200 1.687123 AGGGGTAACATTCCTCGATCG 59.313 52.381 9.36 9.36 39.74 3.69
1121 1201 3.388345 GAGGGGTAACATTCCTCGATC 57.612 52.381 0.00 0.00 37.85 3.69
1188 1275 0.321122 AAGACAGAAGCTTCGGGCAG 60.321 55.000 30.39 16.81 44.79 4.85
1596 1688 3.083997 GGTGGCGACCCAGAGGAT 61.084 66.667 6.63 0.00 43.18 3.24
1828 1920 4.790861 GAACGACGACCCGGAGCC 62.791 72.222 0.73 0.00 0.00 4.70
1829 1921 3.680338 GAGAACGACGACCCGGAGC 62.680 68.421 0.73 0.00 0.00 4.70
1831 1923 2.033141 AGAGAACGACGACCCGGA 59.967 61.111 0.73 0.00 0.00 5.14
1832 1924 2.178521 CAGAGAACGACGACCCGG 59.821 66.667 0.00 0.00 0.00 5.73
1833 1925 2.504244 GCAGAGAACGACGACCCG 60.504 66.667 0.00 0.00 0.00 5.28
1834 1926 2.504244 CGCAGAGAACGACGACCC 60.504 66.667 0.00 0.00 0.00 4.46
1835 1927 2.504244 CCGCAGAGAACGACGACC 60.504 66.667 0.00 0.00 0.00 4.79
1973 2070 2.349722 GCATGCATGTGCGATCGAATTA 60.350 45.455 26.79 1.84 45.83 1.40
2057 2155 3.920446 AGCGAAGAAGAGGAAGAAGAAC 58.080 45.455 0.00 0.00 0.00 3.01
2067 2188 5.365403 ACCGAATCTATAGCGAAGAAGAG 57.635 43.478 0.00 0.00 0.00 2.85
2144 2266 4.248691 TGATGCATGAGGTATCTCTTCG 57.751 45.455 2.46 0.00 39.16 3.79
2265 2387 2.285220 CGGCGATGATCCAAAAGTAGTG 59.715 50.000 0.00 0.00 0.00 2.74
2291 2413 8.458843 GCCACATAATATGACAACTTTAACAGT 58.541 33.333 7.33 0.00 37.30 3.55
2370 2494 9.914131 AATTAAAGCAAAGAGACAGGATTTAAC 57.086 29.630 0.00 0.00 0.00 2.01
2377 2697 9.696917 AACAAATAATTAAAGCAAAGAGACAGG 57.303 29.630 0.00 0.00 0.00 4.00
2429 2749 9.405587 GCTGAAAACATGTACTTAAAGCAAATA 57.594 29.630 0.00 0.00 0.00 1.40
2430 2750 7.384932 GGCTGAAAACATGTACTTAAAGCAAAT 59.615 33.333 19.23 0.00 0.00 2.32
2431 2751 6.699642 GGCTGAAAACATGTACTTAAAGCAAA 59.300 34.615 19.23 0.00 0.00 3.68
2432 2752 6.183360 TGGCTGAAAACATGTACTTAAAGCAA 60.183 34.615 19.23 11.80 0.00 3.91
2433 2753 5.300539 TGGCTGAAAACATGTACTTAAAGCA 59.699 36.000 19.23 10.00 0.00 3.91
2434 2754 5.629435 GTGGCTGAAAACATGTACTTAAAGC 59.371 40.000 0.00 8.62 0.00 3.51
2435 2755 6.970484 AGTGGCTGAAAACATGTACTTAAAG 58.030 36.000 0.00 0.00 0.00 1.85
2436 2756 6.952773 AGTGGCTGAAAACATGTACTTAAA 57.047 33.333 0.00 0.00 0.00 1.52
2437 2757 6.770785 AGAAGTGGCTGAAAACATGTACTTAA 59.229 34.615 0.00 0.00 0.00 1.85
2438 2758 6.296026 AGAAGTGGCTGAAAACATGTACTTA 58.704 36.000 0.00 0.00 0.00 2.24
2439 2759 5.133221 AGAAGTGGCTGAAAACATGTACTT 58.867 37.500 0.00 2.06 0.00 2.24
2469 2789 1.086696 GACTTGCGCATGCCTCTTTA 58.913 50.000 21.93 0.00 41.78 1.85
2709 3076 6.313164 GGAGCTTGTTTTAGTACCAGTCATAC 59.687 42.308 0.00 0.00 0.00 2.39
2710 3077 6.014070 TGGAGCTTGTTTTAGTACCAGTCATA 60.014 38.462 0.00 0.00 0.00 2.15
2711 3078 5.221843 TGGAGCTTGTTTTAGTACCAGTCAT 60.222 40.000 0.00 0.00 0.00 3.06
2712 3079 4.101898 TGGAGCTTGTTTTAGTACCAGTCA 59.898 41.667 0.00 0.00 0.00 3.41
2713 3080 4.638304 TGGAGCTTGTTTTAGTACCAGTC 58.362 43.478 0.00 0.00 0.00 3.51
2714 3081 4.699925 TGGAGCTTGTTTTAGTACCAGT 57.300 40.909 0.00 0.00 0.00 4.00
2715 3082 6.575162 AAATGGAGCTTGTTTTAGTACCAG 57.425 37.500 0.00 0.00 0.00 4.00
2716 3083 6.239176 CCAAAATGGAGCTTGTTTTAGTACCA 60.239 38.462 0.00 0.00 40.96 3.25
2717 3084 6.015772 TCCAAAATGGAGCTTGTTTTAGTACC 60.016 38.462 0.00 0.00 42.67 3.34
2718 3085 6.977213 TCCAAAATGGAGCTTGTTTTAGTAC 58.023 36.000 0.00 0.00 42.67 2.73
2758 3128 8.338259 CAGCATGGCTAAATTAGTACAGTTAAG 58.662 37.037 1.68 0.00 36.40 1.85
2782 3153 8.709646 GTGGTTACAAACTTAGAATGAGTACAG 58.290 37.037 0.00 0.00 0.00 2.74
2837 3208 2.410730 GCGTGCGTCAACAACTATAGTT 59.589 45.455 12.50 12.50 39.12 2.24
2865 3238 5.354234 AGCAGGCATGTTTAACATAGTACAC 59.646 40.000 10.46 0.01 36.53 2.90
2879 3252 2.494870 GGAAAATTCAGAGCAGGCATGT 59.505 45.455 0.00 0.00 0.00 3.21
2914 3287 3.499338 TCCCTTGTTCTGAACATGCATT 58.501 40.909 22.60 0.00 41.79 3.56
2962 3335 0.321387 ATCAGCTATCTGGCATGGCG 60.321 55.000 15.27 9.60 40.69 5.69
2963 3336 1.166129 CATCAGCTATCTGGCATGGC 58.834 55.000 13.29 13.29 40.69 4.40
3235 3608 4.008330 TGTGCTACTGAGTAGTGAGTACC 58.992 47.826 19.80 3.27 38.30 3.34
3239 3612 2.159503 CGGTGTGCTACTGAGTAGTGAG 60.160 54.545 19.80 0.00 38.30 3.51
3240 3613 1.810755 CGGTGTGCTACTGAGTAGTGA 59.189 52.381 19.80 5.56 38.30 3.41
3241 3614 1.135373 CCGGTGTGCTACTGAGTAGTG 60.135 57.143 19.80 0.00 38.30 2.74
3242 3615 1.174783 CCGGTGTGCTACTGAGTAGT 58.825 55.000 19.80 0.00 38.30 2.73
3243 3616 0.179134 GCCGGTGTGCTACTGAGTAG 60.179 60.000 15.12 15.12 37.93 2.57
3244 3617 0.896479 TGCCGGTGTGCTACTGAGTA 60.896 55.000 1.90 0.00 37.93 2.59
3245 3618 2.207229 TGCCGGTGTGCTACTGAGT 61.207 57.895 1.90 0.00 37.93 3.41
3246 3619 1.738099 GTGCCGGTGTGCTACTGAG 60.738 63.158 1.90 0.00 37.93 3.35
3247 3620 2.342279 GTGCCGGTGTGCTACTGA 59.658 61.111 1.90 0.00 37.93 3.41
3248 3621 2.030412 TGTGCCGGTGTGCTACTG 59.970 61.111 1.90 0.00 35.32 2.74
3249 3622 2.030562 GTGTGCCGGTGTGCTACT 59.969 61.111 1.90 0.00 0.00 2.57
3250 3623 1.671054 ATGTGTGCCGGTGTGCTAC 60.671 57.895 1.90 0.00 0.00 3.58
3251 3624 1.670730 CATGTGTGCCGGTGTGCTA 60.671 57.895 1.90 0.00 0.00 3.49
3252 3625 2.979676 CATGTGTGCCGGTGTGCT 60.980 61.111 1.90 0.00 0.00 4.40
3253 3626 4.705519 GCATGTGTGCCGGTGTGC 62.706 66.667 1.90 1.11 45.76 4.57
3286 3659 6.967135 TCGGATGTGTCTGTTCATATACTAC 58.033 40.000 0.00 0.00 32.33 2.73
3290 3663 8.417884 TGTTAATCGGATGTGTCTGTTCATATA 58.582 33.333 0.00 0.00 32.33 0.86
3291 3664 7.272244 TGTTAATCGGATGTGTCTGTTCATAT 58.728 34.615 0.00 0.00 32.33 1.78
3292 3665 6.635755 TGTTAATCGGATGTGTCTGTTCATA 58.364 36.000 0.00 0.00 32.33 2.15
3293 3666 5.487433 TGTTAATCGGATGTGTCTGTTCAT 58.513 37.500 0.00 0.00 32.33 2.57
3294 3667 4.888917 TGTTAATCGGATGTGTCTGTTCA 58.111 39.130 0.00 0.00 32.33 3.18
3295 3668 6.422776 AATGTTAATCGGATGTGTCTGTTC 57.577 37.500 0.00 0.00 32.33 3.18
3296 3669 7.915293 TTAATGTTAATCGGATGTGTCTGTT 57.085 32.000 0.00 0.00 32.33 3.16
3298 3671 7.226523 TGGATTAATGTTAATCGGATGTGTCTG 59.773 37.037 15.53 0.00 46.25 3.51
3305 3678 8.704849 TTTCCATGGATTAATGTTAATCGGAT 57.295 30.769 17.06 9.60 46.25 4.18
3312 3685 9.699410 AGAGACATTTTCCATGGATTAATGTTA 57.301 29.630 33.89 13.61 38.58 2.41
3322 3852 6.152323 ACAATGAGAAGAGACATTTTCCATGG 59.848 38.462 4.97 4.97 35.01 3.66
3335 3865 5.998454 ACAAGACAACACAATGAGAAGAG 57.002 39.130 0.00 0.00 0.00 2.85
3410 3940 7.064371 CAGTTTCAAATTTCACACCAATCAACA 59.936 33.333 0.00 0.00 0.00 3.33
3412 3942 6.538021 CCAGTTTCAAATTTCACACCAATCAA 59.462 34.615 0.00 0.00 0.00 2.57
3431 3961 0.974383 ACGATCGGAGGAACCAGTTT 59.026 50.000 20.98 0.00 38.90 2.66
3471 4002 4.631813 AGATCGATTAACTGAAACCTGCAC 59.368 41.667 0.00 0.00 0.00 4.57
3631 4164 1.150567 GCTGCTGCTATGTCGACCAG 61.151 60.000 14.12 13.64 36.03 4.00
3703 4236 9.111519 TGGTTGATTACATAGGTGGATATATGT 57.888 33.333 0.00 3.60 43.31 2.29
3727 4260 1.338973 GCATGCATATGGGTTGACTGG 59.661 52.381 14.21 0.00 34.79 4.00
3730 4263 3.057315 GGTATGCATGCATATGGGTTGAC 60.057 47.826 36.01 25.04 40.49 3.18
3731 4264 3.156293 GGTATGCATGCATATGGGTTGA 58.844 45.455 36.01 16.32 40.49 3.18
3735 4268 2.490509 CAGTGGTATGCATGCATATGGG 59.509 50.000 36.01 22.19 40.49 4.00
3775 4309 3.043586 CGCTACACACTATCATCGGTTC 58.956 50.000 0.00 0.00 0.00 3.62
3788 4322 6.813152 GGTAAAATTTAGGACTACGCTACACA 59.187 38.462 0.00 0.00 0.00 3.72
3810 4344 4.397832 GACGGCCGGGCAAAGGTA 62.398 66.667 31.76 0.00 0.00 3.08
3916 4452 1.443194 CGTGCCATGCAGAAACAGC 60.443 57.895 0.00 0.00 40.08 4.40
3937 4473 4.115401 TGCACAGCAACATTTTTGTACA 57.885 36.364 0.00 0.00 34.76 2.90
3974 4512 0.456221 AATCTCTGCACCTACGACGG 59.544 55.000 0.00 0.00 0.00 4.79
4123 4670 2.538132 GCGCGCGTTGGAAAAAGTATAT 60.538 45.455 32.35 0.00 0.00 0.86
4420 4977 4.329256 GCTTACTGAATTTCCGTAGTGTCC 59.671 45.833 1.72 0.00 0.00 4.02
4493 5050 2.106844 GCCAAATGTTAGGCGGAGG 58.893 57.895 0.00 0.00 41.70 4.30
4540 5097 0.107081 AACGTTTGGTGGATCGGTCA 59.893 50.000 0.00 0.00 0.00 4.02
4541 5098 2.083167 TAACGTTTGGTGGATCGGTC 57.917 50.000 5.91 0.00 0.00 4.79
4542 5099 2.773993 ATAACGTTTGGTGGATCGGT 57.226 45.000 5.91 0.00 0.00 4.69
4549 5118 5.621197 TCCTGAATGAATAACGTTTGGTG 57.379 39.130 5.91 0.00 0.00 4.17
4570 5139 3.648339 TCAGTGCATTTTTGCCTCTTC 57.352 42.857 0.00 0.00 0.00 2.87
4589 5159 1.209504 TGGTCGATCCATTGGAGGTTC 59.790 52.381 11.78 3.23 41.93 3.62
4620 5198 3.981211 TGCATTTTTGCCTCTTCTGAAC 58.019 40.909 0.00 0.00 0.00 3.18
4692 5270 2.605580 GCACTGTCTGTAAAAAGCCTGC 60.606 50.000 0.00 0.00 0.00 4.85
4707 5285 0.759346 AGGAACTCGAAAGGCACTGT 59.241 50.000 0.00 0.00 40.86 3.55
4711 5289 0.179032 TTGCAGGAACTCGAAAGGCA 60.179 50.000 0.00 0.00 34.60 4.75
4712 5290 0.519077 CTTGCAGGAACTCGAAAGGC 59.481 55.000 0.00 0.00 34.60 4.35
4734 5312 7.094890 TGCACTGAAGTAGAAGTAGTGTAGTAC 60.095 40.741 0.00 0.00 40.52 2.73
4787 5380 0.034337 TCTGCCACTGAAACGGGTAC 59.966 55.000 0.00 0.00 0.00 3.34
4790 5383 0.535102 AACTCTGCCACTGAAACGGG 60.535 55.000 0.00 0.00 0.00 5.28
4812 5405 0.733150 CCAGCAGATGTGTCAGCATG 59.267 55.000 0.00 0.00 39.15 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.