Multiple sequence alignment - TraesCS2D01G098700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G098700 chr2D 100.000 3317 0 0 1 3317 50991071 50987755 0.000000e+00 6126.0
1 TraesCS2D01G098700 chr2D 88.901 901 39 31 480 1355 50967298 50968162 0.000000e+00 1053.0
2 TraesCS2D01G098700 chr2D 87.657 794 36 22 1 778 50954279 50955026 0.000000e+00 867.0
3 TraesCS2D01G098700 chr2D 84.279 458 22 19 1005 1455 50955026 50955440 5.150000e-108 401.0
4 TraesCS2D01G098700 chr2D 89.297 327 23 3 1 327 50966722 50967036 1.850000e-107 399.0
5 TraesCS2D01G098700 chr2D 94.512 164 8 1 2091 2254 51002360 51002522 5.490000e-63 252.0
6 TraesCS2D01G098700 chr2D 90.476 147 4 7 403 549 50967162 50967298 5.650000e-43 185.0
7 TraesCS2D01G098700 chr2D 91.463 82 4 3 3004 3083 218366552 218366632 3.500000e-20 110.0
8 TraesCS2D01G098700 chr2A 90.042 2149 99 55 1 2087 52394493 52392398 0.000000e+00 2676.0
9 TraesCS2D01G098700 chr2A 88.604 702 27 15 2082 2741 52392360 52391670 0.000000e+00 804.0
10 TraesCS2D01G098700 chr2A 90.789 532 27 12 133 650 52271561 52272084 0.000000e+00 691.0
11 TraesCS2D01G098700 chr2A 89.677 310 22 4 3012 3317 52005531 52005228 1.440000e-103 387.0
12 TraesCS2D01G098700 chr2A 88.509 322 20 11 984 1296 52272475 52272788 1.120000e-99 374.0
13 TraesCS2D01G098700 chr2A 94.643 168 7 2 2087 2254 52413070 52413235 3.280000e-65 259.0
14 TraesCS2D01G098700 chr2A 94.737 76 4 0 2605 2680 52390818 52390743 5.810000e-23 119.0
15 TraesCS2D01G098700 chr2A 96.610 59 2 0 2683 2741 52390663 52390605 7.570000e-17 99.0
16 TraesCS2D01G098700 chr2B 88.731 2183 92 65 9 2083 79246027 79248163 0.000000e+00 2527.0
17 TraesCS2D01G098700 chr2B 91.024 635 26 13 7 619 79310617 79309992 0.000000e+00 828.0
18 TraesCS2D01G098700 chr2B 86.591 619 26 14 2091 2680 79248203 79248793 6.040000e-177 630.0
19 TraesCS2D01G098700 chr2B 93.269 208 7 2 975 1182 79309440 79309240 1.930000e-77 300.0
20 TraesCS2D01G098700 chr2B 90.041 241 9 1 1215 1455 79309240 79309015 6.960000e-77 298.0
21 TraesCS2D01G098700 chr2B 96.894 161 5 0 672 832 79309692 79309532 1.520000e-68 270.0
22 TraesCS2D01G098700 chr5A 84.466 309 35 12 3012 3317 680091165 680090867 3.240000e-75 292.0
23 TraesCS2D01G098700 chr6A 92.500 80 6 0 3004 3083 608672669 608672748 7.520000e-22 115.0
24 TraesCS2D01G098700 chr3D 91.250 80 7 0 3004 3083 546487878 546487957 3.500000e-20 110.0
25 TraesCS2D01G098700 chr3D 90.625 64 6 0 1537 1600 485071490 485071427 5.900000e-13 86.1
26 TraesCS2D01G098700 chr3A 91.250 80 7 0 3004 3083 593514167 593514246 3.500000e-20 110.0
27 TraesCS2D01G098700 chr3A 92.188 64 5 0 1537 1600 627967918 627967855 1.270000e-14 91.6
28 TraesCS2D01G098700 chr1D 90.361 83 8 0 3004 3086 435235359 435235277 3.500000e-20 110.0
29 TraesCS2D01G098700 chr5D 90.361 83 7 1 3004 3086 520495619 520495538 1.260000e-19 108.0
30 TraesCS2D01G098700 chr5D 97.778 45 1 0 2804 2848 63547244 63547200 9.870000e-11 78.7
31 TraesCS2D01G098700 chr5B 90.361 83 7 1 3004 3086 508122590 508122509 1.260000e-19 108.0
32 TraesCS2D01G098700 chr5B 95.652 46 2 0 2804 2849 67025550 67025595 1.280000e-09 75.0
33 TraesCS2D01G098700 chr5B 95.652 46 2 0 2804 2849 67031957 67032002 1.280000e-09 75.0
34 TraesCS2D01G098700 chr1B 87.302 63 5 3 2799 2859 47919065 47919126 5.940000e-08 69.4
35 TraesCS2D01G098700 chr6D 96.875 32 1 0 2351 2382 294418496 294418527 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G098700 chr2D 50987755 50991071 3316 True 6126.000000 6126 100.00000 1 3317 1 chr2D.!!$R1 3316
1 TraesCS2D01G098700 chr2D 50954279 50955440 1161 False 634.000000 867 85.96800 1 1455 2 chr2D.!!$F3 1454
2 TraesCS2D01G098700 chr2D 50966722 50968162 1440 False 545.666667 1053 89.55800 1 1355 3 chr2D.!!$F4 1354
3 TraesCS2D01G098700 chr2A 52390605 52394493 3888 True 924.500000 2676 92.49825 1 2741 4 chr2A.!!$R2 2740
4 TraesCS2D01G098700 chr2A 52271561 52272788 1227 False 532.500000 691 89.64900 133 1296 2 chr2A.!!$F2 1163
5 TraesCS2D01G098700 chr2B 79246027 79248793 2766 False 1578.500000 2527 87.66100 9 2680 2 chr2B.!!$F1 2671
6 TraesCS2D01G098700 chr2B 79309015 79310617 1602 True 424.000000 828 92.80700 7 1455 4 chr2B.!!$R1 1448


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
305 315 0.831711 ATGGTGTTTGGTTGGCTCCC 60.832 55.0 0.0 0.0 0.00 4.30 F
1900 2502 0.037303 AATGTGCTGTACTGGCTGCT 59.963 50.0 0.0 0.0 34.93 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2296 3012 0.390472 CAGAAGGAGGCCGAGTTGAC 60.390 60.0 0.0 0.0 0.00 3.18 R
3295 5028 0.031721 ACTGCTTTGCTGCTTGCTTC 59.968 50.0 0.0 0.0 43.37 3.86 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 1.773054 GCGTGCTCAGCCATCATCAG 61.773 60.000 0.00 0.00 0.00 2.90
305 315 0.831711 ATGGTGTTTGGTTGGCTCCC 60.832 55.000 0.00 0.00 0.00 4.30
321 331 6.523035 TGGCTCCCAGGACAAAAATATATA 57.477 37.500 0.00 0.00 0.00 0.86
322 332 6.303839 TGGCTCCCAGGACAAAAATATATAC 58.696 40.000 0.00 0.00 0.00 1.47
340 391 2.848678 ACTACCTCATCTGCCTACCA 57.151 50.000 0.00 0.00 0.00 3.25
354 408 1.815003 CCTACCAGCAGCAAGGAAAAG 59.185 52.381 10.66 5.22 0.00 2.27
597 764 4.060205 GGCCAAAAATATAATGCAGCTGG 58.940 43.478 17.12 0.00 0.00 4.85
783 1289 4.222847 GATCTGGTCCCGGCCGTC 62.223 72.222 26.12 13.81 0.00 4.79
847 1400 1.959282 CTTTCCTGTTGCTTCCTTGCT 59.041 47.619 0.00 0.00 0.00 3.91
932 1489 1.954382 GTGGTTTCCCTGTTTGACCTC 59.046 52.381 0.00 0.00 0.00 3.85
956 1514 2.125229 CTGGCTGCAGCTGATCGT 60.125 61.111 35.82 0.00 41.70 3.73
1656 2252 2.551912 CGCACCCTGAAAAACCGCT 61.552 57.895 0.00 0.00 0.00 5.52
1762 2358 0.459078 TCGAGCATCTCAAGGAGCTG 59.541 55.000 0.00 0.00 37.48 4.24
1769 2365 3.369892 GCATCTCAAGGAGCTGAAGGTAA 60.370 47.826 0.00 0.00 28.47 2.85
1770 2366 4.836825 CATCTCAAGGAGCTGAAGGTAAA 58.163 43.478 0.00 0.00 28.47 2.01
1771 2367 4.974645 TCTCAAGGAGCTGAAGGTAAAA 57.025 40.909 0.00 0.00 0.00 1.52
1772 2368 5.304686 TCTCAAGGAGCTGAAGGTAAAAA 57.695 39.130 0.00 0.00 0.00 1.94
1815 2411 3.745975 TCTCTGGTTAATTCACTTGTGCG 59.254 43.478 0.00 0.00 0.00 5.34
1816 2412 3.472652 TCTGGTTAATTCACTTGTGCGT 58.527 40.909 0.00 0.00 0.00 5.24
1817 2413 3.249799 TCTGGTTAATTCACTTGTGCGTG 59.750 43.478 0.00 0.00 36.25 5.34
1818 2414 2.287308 TGGTTAATTCACTTGTGCGTGC 60.287 45.455 0.00 0.00 34.92 5.34
1864 2466 2.438021 AGTCCTGTGCCACTAGTCAAAA 59.562 45.455 0.00 0.00 0.00 2.44
1897 2499 1.404717 CGAGAATGTGCTGTACTGGCT 60.405 52.381 11.40 0.00 0.00 4.75
1898 2500 2.005451 GAGAATGTGCTGTACTGGCTG 58.995 52.381 11.40 0.00 0.00 4.85
1899 2501 0.449388 GAATGTGCTGTACTGGCTGC 59.551 55.000 11.40 0.00 0.00 5.25
1900 2502 0.037303 AATGTGCTGTACTGGCTGCT 59.963 50.000 0.00 0.00 34.93 4.24
1901 2503 0.675837 ATGTGCTGTACTGGCTGCTG 60.676 55.000 0.00 0.00 34.93 4.41
1903 2505 1.301953 TGCTGTACTGGCTGCTGTG 60.302 57.895 0.00 0.00 34.93 3.66
1904 2506 2.684843 GCTGTACTGGCTGCTGTGC 61.685 63.158 0.00 3.70 0.00 4.57
1905 2507 1.004080 CTGTACTGGCTGCTGTGCT 60.004 57.895 0.00 0.00 0.00 4.40
1919 2529 3.142174 GCTGTGCTACTTCCAAACTTCT 58.858 45.455 0.00 0.00 0.00 2.85
1928 2538 0.472471 TCCAAACTTCTTGCTCCGGT 59.528 50.000 0.00 0.00 0.00 5.28
1933 2543 0.179018 ACTTCTTGCTCCGGTTGCTT 60.179 50.000 19.31 0.00 0.00 3.91
1934 2544 0.239347 CTTCTTGCTCCGGTTGCTTG 59.761 55.000 19.31 13.15 0.00 4.01
1935 2545 1.795170 TTCTTGCTCCGGTTGCTTGC 61.795 55.000 19.31 8.84 0.00 4.01
1936 2546 2.203337 TTGCTCCGGTTGCTTGCT 60.203 55.556 19.31 0.00 0.00 3.91
1937 2547 1.799258 CTTGCTCCGGTTGCTTGCTT 61.799 55.000 19.31 0.00 0.00 3.91
1938 2548 1.795170 TTGCTCCGGTTGCTTGCTTC 61.795 55.000 19.31 0.00 0.00 3.86
1939 2549 2.982744 GCTCCGGTTGCTTGCTTCC 61.983 63.158 13.37 0.00 0.00 3.46
1944 2554 0.102120 CGGTTGCTTGCTTCCAACAA 59.898 50.000 13.22 0.00 42.26 2.83
1959 2569 2.489329 CCAACAATGGCGTGATCTTTCT 59.511 45.455 0.00 0.00 40.58 2.52
1960 2570 3.426695 CCAACAATGGCGTGATCTTTCTC 60.427 47.826 0.00 0.00 40.58 2.87
1962 2572 3.679389 ACAATGGCGTGATCTTTCTCTT 58.321 40.909 0.00 0.00 0.00 2.85
1964 2574 4.154918 ACAATGGCGTGATCTTTCTCTTTC 59.845 41.667 0.00 0.00 0.00 2.62
1965 2575 3.401033 TGGCGTGATCTTTCTCTTTCA 57.599 42.857 0.00 0.00 0.00 2.69
1966 2576 3.738982 TGGCGTGATCTTTCTCTTTCAA 58.261 40.909 0.00 0.00 0.00 2.69
1969 2579 4.094212 GCGTGATCTTTCTCTTTCAATGC 58.906 43.478 0.00 0.00 0.00 3.56
1970 2580 4.656041 CGTGATCTTTCTCTTTCAATGCC 58.344 43.478 0.00 0.00 0.00 4.40
1971 2581 4.154737 CGTGATCTTTCTCTTTCAATGCCA 59.845 41.667 0.00 0.00 0.00 4.92
1972 2582 5.163683 CGTGATCTTTCTCTTTCAATGCCAT 60.164 40.000 0.00 0.00 0.00 4.40
2120 2830 4.038042 ACTGTTGATCAAGTCTCTTCGTCA 59.962 41.667 8.80 0.00 0.00 4.35
2142 2852 6.201234 GTCAGAGCTAAGTTTCTTTTCTCGTT 59.799 38.462 0.00 0.00 0.00 3.85
2321 3037 1.066587 CGGCCTCCTTCTGATCGAC 59.933 63.158 0.00 0.00 0.00 4.20
2346 3066 4.103103 CGGCGAGAGAGCGACACA 62.103 66.667 0.00 0.00 39.90 3.72
2526 3271 0.250467 TGCAGTCTGTCTCTTTGGGC 60.250 55.000 0.93 0.00 0.00 5.36
2586 3331 5.340803 CAATCAGTGCATCTTTCTTGGATG 58.659 41.667 0.00 0.00 42.25 3.51
2666 3415 0.529773 TGTCCACACACTCAAGCGAC 60.530 55.000 0.00 0.00 0.00 5.19
2680 3429 5.240183 ACTCAAGCGACTGTAAACTGTACTA 59.760 40.000 0.00 0.00 0.00 1.82
2682 3431 5.240183 TCAAGCGACTGTAAACTGTACTACT 59.760 40.000 0.00 0.00 0.00 2.57
2729 3486 1.279025 TAACACTGGGAGGGGGATGC 61.279 60.000 0.00 0.00 0.00 3.91
2741 3498 3.452627 GAGGGGGATGCTAACATATCGAT 59.547 47.826 2.16 2.16 36.35 3.59
2742 3499 3.452627 AGGGGGATGCTAACATATCGATC 59.547 47.826 0.00 0.00 36.35 3.69
2743 3500 3.452627 GGGGGATGCTAACATATCGATCT 59.547 47.826 0.00 0.00 36.35 2.75
2744 3501 4.649674 GGGGGATGCTAACATATCGATCTA 59.350 45.833 0.00 0.00 36.35 1.98
2745 3502 5.128827 GGGGGATGCTAACATATCGATCTAA 59.871 44.000 0.00 0.00 36.35 2.10
2746 3503 6.351881 GGGGGATGCTAACATATCGATCTAAA 60.352 42.308 0.00 0.00 36.35 1.85
2747 3504 7.275920 GGGGATGCTAACATATCGATCTAAAT 58.724 38.462 0.00 0.00 36.35 1.40
2748 3505 7.225538 GGGGATGCTAACATATCGATCTAAATG 59.774 40.741 0.00 2.38 36.35 2.32
2749 3506 7.254590 GGGATGCTAACATATCGATCTAAATGC 60.255 40.741 0.00 2.26 36.35 3.56
2750 3507 7.493971 GGATGCTAACATATCGATCTAAATGCT 59.506 37.037 0.00 0.00 36.35 3.79
2751 3508 7.818493 TGCTAACATATCGATCTAAATGCTC 57.182 36.000 0.00 0.00 0.00 4.26
2753 3510 6.256757 GCTAACATATCGATCTAAATGCTCCC 59.743 42.308 0.00 0.00 0.00 4.30
2754 3511 5.745312 ACATATCGATCTAAATGCTCCCA 57.255 39.130 0.00 0.00 0.00 4.37
2755 3512 6.114187 ACATATCGATCTAAATGCTCCCAA 57.886 37.500 0.00 0.00 0.00 4.12
2756 3513 6.533730 ACATATCGATCTAAATGCTCCCAAA 58.466 36.000 0.00 0.00 0.00 3.28
2757 3514 6.652481 ACATATCGATCTAAATGCTCCCAAAG 59.348 38.462 0.00 0.00 0.00 2.77
2759 3516 4.843728 TCGATCTAAATGCTCCCAAAGTT 58.156 39.130 0.00 0.00 0.00 2.66
2760 3517 4.635765 TCGATCTAAATGCTCCCAAAGTTG 59.364 41.667 0.00 0.00 0.00 3.16
2761 3518 4.635765 CGATCTAAATGCTCCCAAAGTTGA 59.364 41.667 0.00 0.00 0.00 3.18
2764 3521 6.271488 TCTAAATGCTCCCAAAGTTGATTG 57.729 37.500 0.00 0.00 0.00 2.67
2783 4516 4.371624 TTGGAATCCAAGAGAGCTTTCA 57.628 40.909 11.23 0.00 38.75 2.69
2789 4522 2.105477 TCCAAGAGAGCTTTCAGCAACT 59.895 45.455 7.06 0.00 45.56 3.16
2791 4524 3.136763 CAAGAGAGCTTTCAGCAACTCA 58.863 45.455 18.34 0.00 45.56 3.41
2795 4528 4.020751 AGAGAGCTTTCAGCAACTCATGTA 60.021 41.667 18.34 0.00 45.56 2.29
2798 4531 5.709164 AGAGCTTTCAGCAACTCATGTAAAT 59.291 36.000 0.00 0.00 45.56 1.40
2800 4533 6.154445 AGCTTTCAGCAACTCATGTAAATTG 58.846 36.000 0.00 0.00 45.56 2.32
2802 4535 6.810182 GCTTTCAGCAACTCATGTAAATTGAT 59.190 34.615 0.00 0.00 41.89 2.57
2809 4542 6.373779 CAACTCATGTAAATTGATATCCGGC 58.626 40.000 0.00 0.00 0.00 6.13
2812 4545 2.147958 TGTAAATTGATATCCGGCGGC 58.852 47.619 23.83 7.83 0.00 6.53
2813 4546 2.147958 GTAAATTGATATCCGGCGGCA 58.852 47.619 23.83 10.90 0.00 5.69
2814 4547 1.686355 AAATTGATATCCGGCGGCAA 58.314 45.000 23.83 19.76 0.00 4.52
2815 4548 1.238439 AATTGATATCCGGCGGCAAG 58.762 50.000 23.83 0.00 0.00 4.01
2827 4560 2.751436 GGCAAGCGGGATCAGCAA 60.751 61.111 13.69 0.00 37.01 3.91
2828 4561 2.123428 GGCAAGCGGGATCAGCAAT 61.123 57.895 13.69 1.13 37.01 3.56
2829 4562 1.669999 GGCAAGCGGGATCAGCAATT 61.670 55.000 13.69 0.00 37.01 2.32
2830 4563 0.174162 GCAAGCGGGATCAGCAATTT 59.826 50.000 13.69 0.00 37.01 1.82
2831 4564 1.405105 GCAAGCGGGATCAGCAATTTA 59.595 47.619 13.69 0.00 37.01 1.40
2832 4565 2.796032 GCAAGCGGGATCAGCAATTTAC 60.796 50.000 13.69 0.00 37.01 2.01
2833 4566 2.418368 AGCGGGATCAGCAATTTACA 57.582 45.000 13.69 0.00 37.01 2.41
2834 4567 2.722094 AGCGGGATCAGCAATTTACAA 58.278 42.857 13.69 0.00 37.01 2.41
2835 4568 3.088532 AGCGGGATCAGCAATTTACAAA 58.911 40.909 13.69 0.00 37.01 2.83
2836 4569 3.701040 AGCGGGATCAGCAATTTACAAAT 59.299 39.130 13.69 0.00 37.01 2.32
2837 4570 4.044426 GCGGGATCAGCAATTTACAAATC 58.956 43.478 7.43 0.00 34.19 2.17
2838 4571 4.202050 GCGGGATCAGCAATTTACAAATCT 60.202 41.667 7.43 0.00 34.19 2.40
2839 4572 5.679638 GCGGGATCAGCAATTTACAAATCTT 60.680 40.000 7.43 0.00 34.19 2.40
2840 4573 5.973565 CGGGATCAGCAATTTACAAATCTTC 59.026 40.000 0.00 0.00 0.00 2.87
2841 4574 6.183360 CGGGATCAGCAATTTACAAATCTTCT 60.183 38.462 0.00 0.00 0.00 2.85
2842 4575 7.550712 GGGATCAGCAATTTACAAATCTTCTT 58.449 34.615 0.00 0.00 0.00 2.52
2843 4576 8.686334 GGGATCAGCAATTTACAAATCTTCTTA 58.314 33.333 0.00 0.00 0.00 2.10
2873 4606 7.687941 AACTTGTGTAAATTGATAGTCCCAG 57.312 36.000 0.00 0.00 0.00 4.45
2874 4607 7.016153 ACTTGTGTAAATTGATAGTCCCAGA 57.984 36.000 0.00 0.00 0.00 3.86
2875 4608 7.106239 ACTTGTGTAAATTGATAGTCCCAGAG 58.894 38.462 0.00 0.00 0.00 3.35
2876 4609 6.867519 TGTGTAAATTGATAGTCCCAGAGA 57.132 37.500 0.00 0.00 0.00 3.10
2877 4610 7.252612 TGTGTAAATTGATAGTCCCAGAGAA 57.747 36.000 0.00 0.00 0.00 2.87
2878 4611 7.685481 TGTGTAAATTGATAGTCCCAGAGAAA 58.315 34.615 0.00 0.00 0.00 2.52
2879 4612 8.160765 TGTGTAAATTGATAGTCCCAGAGAAAA 58.839 33.333 0.00 0.00 0.00 2.29
2880 4613 8.669243 GTGTAAATTGATAGTCCCAGAGAAAAG 58.331 37.037 0.00 0.00 0.00 2.27
2881 4614 8.602424 TGTAAATTGATAGTCCCAGAGAAAAGA 58.398 33.333 0.00 0.00 0.00 2.52
2882 4615 7.929941 AAATTGATAGTCCCAGAGAAAAGAC 57.070 36.000 0.00 0.00 0.00 3.01
2883 4616 6.627087 ATTGATAGTCCCAGAGAAAAGACA 57.373 37.500 0.00 0.00 0.00 3.41
2884 4617 5.407407 TGATAGTCCCAGAGAAAAGACAC 57.593 43.478 0.00 0.00 0.00 3.67
2885 4618 5.087323 TGATAGTCCCAGAGAAAAGACACT 58.913 41.667 0.00 0.00 0.00 3.55
2886 4619 3.760580 AGTCCCAGAGAAAAGACACTG 57.239 47.619 0.00 0.00 0.00 3.66
2887 4620 3.309296 AGTCCCAGAGAAAAGACACTGA 58.691 45.455 0.00 0.00 31.94 3.41
2888 4621 3.906846 AGTCCCAGAGAAAAGACACTGAT 59.093 43.478 0.00 0.00 31.94 2.90
2889 4622 5.087323 AGTCCCAGAGAAAAGACACTGATA 58.913 41.667 0.00 0.00 31.94 2.15
2890 4623 5.544176 AGTCCCAGAGAAAAGACACTGATAA 59.456 40.000 0.00 0.00 31.94 1.75
2891 4624 6.043243 AGTCCCAGAGAAAAGACACTGATAAA 59.957 38.462 0.00 0.00 31.94 1.40
2892 4625 6.147985 GTCCCAGAGAAAAGACACTGATAAAC 59.852 42.308 0.00 0.00 31.94 2.01
2893 4626 5.997746 CCCAGAGAAAAGACACTGATAAACA 59.002 40.000 0.00 0.00 31.94 2.83
2894 4627 6.073003 CCCAGAGAAAAGACACTGATAAACAC 60.073 42.308 0.00 0.00 31.94 3.32
2895 4628 6.708054 CCAGAGAAAAGACACTGATAAACACT 59.292 38.462 0.00 0.00 31.94 3.55
2896 4629 7.227512 CCAGAGAAAAGACACTGATAAACACTT 59.772 37.037 0.00 0.00 31.94 3.16
2897 4630 8.279103 CAGAGAAAAGACACTGATAAACACTTC 58.721 37.037 0.00 0.00 31.94 3.01
2898 4631 7.442666 AGAGAAAAGACACTGATAAACACTTCC 59.557 37.037 0.00 0.00 0.00 3.46
2899 4632 7.054124 AGAAAAGACACTGATAAACACTTCCA 58.946 34.615 0.00 0.00 0.00 3.53
2900 4633 6.867662 AAAGACACTGATAAACACTTCCAG 57.132 37.500 0.00 0.00 0.00 3.86
2901 4634 4.319177 AGACACTGATAAACACTTCCAGC 58.681 43.478 0.00 0.00 0.00 4.85
2902 4635 3.412386 ACACTGATAAACACTTCCAGCC 58.588 45.455 0.00 0.00 0.00 4.85
2903 4636 2.416547 CACTGATAAACACTTCCAGCCG 59.583 50.000 0.00 0.00 0.00 5.52
2904 4637 2.301870 ACTGATAAACACTTCCAGCCGA 59.698 45.455 0.00 0.00 0.00 5.54
2905 4638 3.055094 ACTGATAAACACTTCCAGCCGAT 60.055 43.478 0.00 0.00 0.00 4.18
2906 4639 3.941483 CTGATAAACACTTCCAGCCGATT 59.059 43.478 0.00 0.00 0.00 3.34
2907 4640 4.331968 TGATAAACACTTCCAGCCGATTT 58.668 39.130 0.00 0.00 0.00 2.17
2908 4641 4.394920 TGATAAACACTTCCAGCCGATTTC 59.605 41.667 0.00 0.00 0.00 2.17
2909 4642 1.534729 AACACTTCCAGCCGATTTCC 58.465 50.000 0.00 0.00 0.00 3.13
2910 4643 0.400213 ACACTTCCAGCCGATTTCCA 59.600 50.000 0.00 0.00 0.00 3.53
2911 4644 1.004745 ACACTTCCAGCCGATTTCCAT 59.995 47.619 0.00 0.00 0.00 3.41
2912 4645 2.094675 CACTTCCAGCCGATTTCCATT 58.905 47.619 0.00 0.00 0.00 3.16
2913 4646 2.094675 ACTTCCAGCCGATTTCCATTG 58.905 47.619 0.00 0.00 0.00 2.82
2914 4647 0.817013 TTCCAGCCGATTTCCATTGC 59.183 50.000 0.00 0.00 0.00 3.56
2915 4648 0.323269 TCCAGCCGATTTCCATTGCA 60.323 50.000 0.00 0.00 0.00 4.08
2916 4649 0.179129 CCAGCCGATTTCCATTGCAC 60.179 55.000 0.00 0.00 0.00 4.57
2917 4650 0.527113 CAGCCGATTTCCATTGCACA 59.473 50.000 0.00 0.00 0.00 4.57
2918 4651 0.527565 AGCCGATTTCCATTGCACAC 59.472 50.000 0.00 0.00 0.00 3.82
2919 4652 0.458370 GCCGATTTCCATTGCACACC 60.458 55.000 0.00 0.00 0.00 4.16
2920 4653 1.176527 CCGATTTCCATTGCACACCT 58.823 50.000 0.00 0.00 0.00 4.00
2921 4654 2.364632 CCGATTTCCATTGCACACCTA 58.635 47.619 0.00 0.00 0.00 3.08
2922 4655 2.097466 CCGATTTCCATTGCACACCTAC 59.903 50.000 0.00 0.00 0.00 3.18
2923 4656 2.223021 CGATTTCCATTGCACACCTACG 60.223 50.000 0.00 0.00 0.00 3.51
2924 4657 1.529226 TTTCCATTGCACACCTACGG 58.471 50.000 0.00 0.00 0.00 4.02
2925 4658 0.398696 TTCCATTGCACACCTACGGT 59.601 50.000 0.00 0.00 35.62 4.83
2941 4674 3.371063 GTGAGTCTCACCCGCCGA 61.371 66.667 20.54 0.00 41.37 5.54
2942 4675 3.062466 TGAGTCTCACCCGCCGAG 61.062 66.667 0.00 0.00 0.00 4.63
2943 4676 2.750637 GAGTCTCACCCGCCGAGA 60.751 66.667 0.00 0.00 37.18 4.04
2944 4677 2.043852 AGTCTCACCCGCCGAGAT 60.044 61.111 0.00 0.00 41.39 2.75
2945 4678 1.668101 GAGTCTCACCCGCCGAGATT 61.668 60.000 0.00 0.00 41.39 2.40
2946 4679 1.218316 GTCTCACCCGCCGAGATTT 59.782 57.895 0.00 0.00 41.39 2.17
2947 4680 1.084370 GTCTCACCCGCCGAGATTTG 61.084 60.000 0.00 0.00 41.39 2.32
2948 4681 2.435938 TCACCCGCCGAGATTTGC 60.436 61.111 0.00 0.00 0.00 3.68
2949 4682 2.745884 CACCCGCCGAGATTTGCA 60.746 61.111 0.00 0.00 0.00 4.08
2950 4683 2.033448 ACCCGCCGAGATTTGCAA 59.967 55.556 0.00 0.00 0.00 4.08
2951 4684 2.332654 ACCCGCCGAGATTTGCAAC 61.333 57.895 0.00 0.00 0.00 4.17
2952 4685 2.098298 CCGCCGAGATTTGCAACG 59.902 61.111 0.00 0.00 0.00 4.10
2953 4686 2.098298 CGCCGAGATTTGCAACGG 59.902 61.111 18.91 18.91 46.74 4.44
2955 4688 2.098298 CCGAGATTTGCAACGGCG 59.902 61.111 12.56 4.80 45.35 6.46
2956 4689 2.387445 CCGAGATTTGCAACGGCGA 61.387 57.895 16.62 0.00 45.35 5.54
2957 4690 1.225745 CGAGATTTGCAACGGCGAC 60.226 57.895 16.62 2.68 45.35 5.19
2958 4691 1.626654 CGAGATTTGCAACGGCGACT 61.627 55.000 16.62 0.00 45.35 4.18
2959 4692 1.355971 GAGATTTGCAACGGCGACTA 58.644 50.000 16.62 0.00 45.35 2.59
2960 4693 1.933853 GAGATTTGCAACGGCGACTAT 59.066 47.619 16.62 0.00 45.35 2.12
2961 4694 2.351726 GAGATTTGCAACGGCGACTATT 59.648 45.455 16.62 0.00 45.35 1.73
2962 4695 2.095853 AGATTTGCAACGGCGACTATTG 59.904 45.455 16.62 8.96 45.35 1.90
2963 4696 0.519519 TTTGCAACGGCGACTATTGG 59.480 50.000 16.62 0.00 45.35 3.16
2964 4697 1.302383 TTGCAACGGCGACTATTGGG 61.302 55.000 16.62 0.00 45.35 4.12
2965 4698 3.098555 CAACGGCGACTATTGGGC 58.901 61.111 16.62 0.00 0.00 5.36
2966 4699 1.449601 CAACGGCGACTATTGGGCT 60.450 57.895 16.62 0.00 0.00 5.19
2967 4700 1.153429 AACGGCGACTATTGGGCTC 60.153 57.895 16.62 0.00 0.00 4.70
2968 4701 2.280186 CGGCGACTATTGGGCTCC 60.280 66.667 0.00 0.00 0.00 4.70
2969 4702 2.280186 GGCGACTATTGGGCTCCG 60.280 66.667 0.00 0.00 0.00 4.63
2970 4703 2.967615 GCGACTATTGGGCTCCGC 60.968 66.667 0.00 0.00 35.91 5.54
2971 4704 2.499205 CGACTATTGGGCTCCGCA 59.501 61.111 0.00 0.00 0.00 5.69
2972 4705 1.883084 CGACTATTGGGCTCCGCAC 60.883 63.158 0.00 0.00 0.00 5.34
2973 4706 1.883084 GACTATTGGGCTCCGCACG 60.883 63.158 0.00 0.00 32.76 5.34
2974 4707 2.292794 GACTATTGGGCTCCGCACGA 62.293 60.000 0.00 0.00 32.76 4.35
2975 4708 1.883084 CTATTGGGCTCCGCACGAC 60.883 63.158 0.00 0.00 32.76 4.34
2976 4709 2.572095 CTATTGGGCTCCGCACGACA 62.572 60.000 0.00 0.00 32.76 4.35
2977 4710 2.845752 TATTGGGCTCCGCACGACAC 62.846 60.000 0.00 0.00 32.76 3.67
2989 4722 4.379143 CGACACGCGTCTCCGACA 62.379 66.667 9.86 0.00 40.23 4.35
2990 4723 2.799916 GACACGCGTCTCCGACAC 60.800 66.667 9.86 0.00 39.22 3.67
2991 4724 4.338539 ACACGCGTCTCCGACACC 62.339 66.667 9.86 0.00 35.63 4.16
2994 4727 4.778415 CGCGTCTCCGACACCCAG 62.778 72.222 0.00 0.00 35.63 4.45
2996 4729 3.374402 CGTCTCCGACACCCAGCT 61.374 66.667 0.00 0.00 35.63 4.24
2997 4730 2.574399 GTCTCCGACACCCAGCTC 59.426 66.667 0.00 0.00 32.09 4.09
2998 4731 2.117423 TCTCCGACACCCAGCTCA 59.883 61.111 0.00 0.00 0.00 4.26
2999 4732 1.533033 TCTCCGACACCCAGCTCAA 60.533 57.895 0.00 0.00 0.00 3.02
3000 4733 1.079543 CTCCGACACCCAGCTCAAG 60.080 63.158 0.00 0.00 0.00 3.02
3001 4734 2.743928 CCGACACCCAGCTCAAGC 60.744 66.667 0.00 0.00 42.49 4.01
3037 4770 6.966534 TTTTGAATGAAAGAGAAGGCTTCT 57.033 33.333 28.94 28.94 44.21 2.85
3044 4777 3.827752 AGAAGGCTTCTCACCCCC 58.172 61.111 23.76 0.00 34.07 5.40
3045 4778 1.162085 AGAAGGCTTCTCACCCCCT 59.838 57.895 23.76 0.00 34.07 4.79
3046 4779 0.912006 AGAAGGCTTCTCACCCCCTC 60.912 60.000 23.76 0.00 34.07 4.30
3047 4780 1.916206 GAAGGCTTCTCACCCCCTCC 61.916 65.000 19.83 0.00 0.00 4.30
3048 4781 3.787001 GGCTTCTCACCCCCTCCG 61.787 72.222 0.00 0.00 0.00 4.63
3049 4782 2.683933 GCTTCTCACCCCCTCCGA 60.684 66.667 0.00 0.00 0.00 4.55
3050 4783 2.066999 GCTTCTCACCCCCTCCGAT 61.067 63.158 0.00 0.00 0.00 4.18
3051 4784 1.627297 GCTTCTCACCCCCTCCGATT 61.627 60.000 0.00 0.00 0.00 3.34
3052 4785 0.912486 CTTCTCACCCCCTCCGATTT 59.088 55.000 0.00 0.00 0.00 2.17
3053 4786 1.282157 CTTCTCACCCCCTCCGATTTT 59.718 52.381 0.00 0.00 0.00 1.82
3054 4787 0.909623 TCTCACCCCCTCCGATTTTC 59.090 55.000 0.00 0.00 0.00 2.29
3055 4788 0.618458 CTCACCCCCTCCGATTTTCA 59.382 55.000 0.00 0.00 0.00 2.69
3056 4789 1.212935 CTCACCCCCTCCGATTTTCAT 59.787 52.381 0.00 0.00 0.00 2.57
3057 4790 1.638589 TCACCCCCTCCGATTTTCATT 59.361 47.619 0.00 0.00 0.00 2.57
3058 4791 2.847449 TCACCCCCTCCGATTTTCATTA 59.153 45.455 0.00 0.00 0.00 1.90
3059 4792 3.267291 TCACCCCCTCCGATTTTCATTAA 59.733 43.478 0.00 0.00 0.00 1.40
3060 4793 4.079443 TCACCCCCTCCGATTTTCATTAAT 60.079 41.667 0.00 0.00 0.00 1.40
3061 4794 4.037923 CACCCCCTCCGATTTTCATTAATG 59.962 45.833 9.29 9.29 0.00 1.90
3062 4795 4.079443 ACCCCCTCCGATTTTCATTAATGA 60.079 41.667 14.23 14.23 34.44 2.57
3063 4796 4.892934 CCCCCTCCGATTTTCATTAATGAA 59.107 41.667 23.86 23.86 44.42 2.57
3077 4810 7.630242 TCATTAATGAAAACCATCAGTCCTC 57.370 36.000 15.82 0.00 33.53 3.71
3078 4811 6.316140 TCATTAATGAAAACCATCAGTCCTCG 59.684 38.462 15.82 0.00 33.53 4.63
3079 4812 2.472695 TGAAAACCATCAGTCCTCGG 57.527 50.000 0.00 0.00 0.00 4.63
3080 4813 1.974957 TGAAAACCATCAGTCCTCGGA 59.025 47.619 0.00 0.00 0.00 4.55
3081 4814 2.289444 TGAAAACCATCAGTCCTCGGAC 60.289 50.000 8.03 8.03 44.86 4.79
3082 4815 7.269514 AATGAAAACCATCAGTCCTCGGACT 62.270 44.000 12.74 12.74 44.50 3.85
3083 4816 7.986076 AATGAAAACCATCAGTCCTCGGACTA 61.986 42.308 17.65 7.76 43.07 2.59
3084 4817 9.882743 AATGAAAACCATCAGTCCTCGGACTAC 62.883 44.444 17.65 0.00 43.07 2.73
3091 4824 2.259505 GTCCTCGGACTACAAAGACG 57.740 55.000 8.82 0.00 41.57 4.18
3092 4825 0.524862 TCCTCGGACTACAAAGACGC 59.475 55.000 0.00 0.00 0.00 5.19
3093 4826 0.242825 CCTCGGACTACAAAGACGCA 59.757 55.000 0.00 0.00 0.00 5.24
3094 4827 1.135083 CCTCGGACTACAAAGACGCAT 60.135 52.381 0.00 0.00 0.00 4.73
3095 4828 2.098607 CCTCGGACTACAAAGACGCATA 59.901 50.000 0.00 0.00 0.00 3.14
3096 4829 3.106672 CTCGGACTACAAAGACGCATAC 58.893 50.000 0.00 0.00 0.00 2.39
3097 4830 2.159338 TCGGACTACAAAGACGCATACC 60.159 50.000 0.00 0.00 0.00 2.73
3098 4831 2.416296 CGGACTACAAAGACGCATACCA 60.416 50.000 0.00 0.00 0.00 3.25
3099 4832 3.592059 GGACTACAAAGACGCATACCAA 58.408 45.455 0.00 0.00 0.00 3.67
3100 4833 3.617263 GGACTACAAAGACGCATACCAAG 59.383 47.826 0.00 0.00 0.00 3.61
3101 4834 3.000727 ACTACAAAGACGCATACCAAGC 58.999 45.455 0.00 0.00 0.00 4.01
3102 4835 1.890876 ACAAAGACGCATACCAAGCA 58.109 45.000 0.00 0.00 0.00 3.91
3103 4836 2.436417 ACAAAGACGCATACCAAGCAT 58.564 42.857 0.00 0.00 0.00 3.79
3104 4837 2.819608 ACAAAGACGCATACCAAGCATT 59.180 40.909 0.00 0.00 0.00 3.56
3105 4838 3.255642 ACAAAGACGCATACCAAGCATTT 59.744 39.130 0.00 0.00 0.00 2.32
3106 4839 4.236935 CAAAGACGCATACCAAGCATTTT 58.763 39.130 0.00 0.00 0.00 1.82
3107 4840 4.519540 AAGACGCATACCAAGCATTTTT 57.480 36.364 0.00 0.00 0.00 1.94
3108 4841 4.096732 AGACGCATACCAAGCATTTTTC 57.903 40.909 0.00 0.00 0.00 2.29
3109 4842 3.505680 AGACGCATACCAAGCATTTTTCA 59.494 39.130 0.00 0.00 0.00 2.69
3110 4843 3.574614 ACGCATACCAAGCATTTTTCAC 58.425 40.909 0.00 0.00 0.00 3.18
3111 4844 3.255642 ACGCATACCAAGCATTTTTCACT 59.744 39.130 0.00 0.00 0.00 3.41
3112 4845 3.853671 CGCATACCAAGCATTTTTCACTC 59.146 43.478 0.00 0.00 0.00 3.51
3113 4846 4.379813 CGCATACCAAGCATTTTTCACTCT 60.380 41.667 0.00 0.00 0.00 3.24
3114 4847 5.163764 CGCATACCAAGCATTTTTCACTCTA 60.164 40.000 0.00 0.00 0.00 2.43
3115 4848 6.620678 GCATACCAAGCATTTTTCACTCTAA 58.379 36.000 0.00 0.00 0.00 2.10
3116 4849 6.528072 GCATACCAAGCATTTTTCACTCTAAC 59.472 38.462 0.00 0.00 0.00 2.34
3117 4850 5.108385 ACCAAGCATTTTTCACTCTAACG 57.892 39.130 0.00 0.00 0.00 3.18
3118 4851 4.023193 ACCAAGCATTTTTCACTCTAACGG 60.023 41.667 0.00 0.00 0.00 4.44
3119 4852 4.475944 CAAGCATTTTTCACTCTAACGGG 58.524 43.478 0.00 0.00 0.00 5.28
3120 4853 4.015872 AGCATTTTTCACTCTAACGGGA 57.984 40.909 0.00 0.00 0.00 5.14
3121 4854 3.751698 AGCATTTTTCACTCTAACGGGAC 59.248 43.478 0.00 0.00 0.00 4.46
3134 4867 3.872431 GGGACGGGTATGAGGGAG 58.128 66.667 0.00 0.00 0.00 4.30
3135 4868 1.075450 GGGACGGGTATGAGGGAGT 60.075 63.158 0.00 0.00 0.00 3.85
3136 4869 1.400530 GGGACGGGTATGAGGGAGTG 61.401 65.000 0.00 0.00 0.00 3.51
3137 4870 1.442148 GACGGGTATGAGGGAGTGC 59.558 63.158 0.00 0.00 0.00 4.40
3138 4871 2.029307 GACGGGTATGAGGGAGTGCC 62.029 65.000 0.00 0.00 0.00 5.01
3139 4872 2.063979 CGGGTATGAGGGAGTGCCA 61.064 63.158 2.50 0.00 35.15 4.92
3140 4873 1.527370 GGGTATGAGGGAGTGCCAC 59.473 63.158 2.50 0.00 35.15 5.01
3141 4874 1.271840 GGGTATGAGGGAGTGCCACA 61.272 60.000 2.77 2.77 35.15 4.17
3142 4875 0.179000 GGTATGAGGGAGTGCCACAG 59.821 60.000 6.96 0.00 35.15 3.66
3143 4876 0.462759 GTATGAGGGAGTGCCACAGC 60.463 60.000 6.96 0.00 40.48 4.40
3154 4887 2.283388 CCACAGCAACCAGGCCAT 60.283 61.111 5.01 0.00 0.00 4.40
3155 4888 1.001020 CCACAGCAACCAGGCCATA 60.001 57.895 5.01 0.00 0.00 2.74
3156 4889 0.611618 CCACAGCAACCAGGCCATAA 60.612 55.000 5.01 0.00 0.00 1.90
3157 4890 0.527565 CACAGCAACCAGGCCATAAC 59.472 55.000 5.01 0.00 0.00 1.89
3158 4891 0.112218 ACAGCAACCAGGCCATAACA 59.888 50.000 5.01 0.00 0.00 2.41
3159 4892 0.527565 CAGCAACCAGGCCATAACAC 59.472 55.000 5.01 0.00 0.00 3.32
3160 4893 0.611896 AGCAACCAGGCCATAACACC 60.612 55.000 5.01 0.00 0.00 4.16
3161 4894 1.604147 GCAACCAGGCCATAACACCC 61.604 60.000 5.01 0.00 0.00 4.61
3162 4895 0.251564 CAACCAGGCCATAACACCCA 60.252 55.000 5.01 0.00 0.00 4.51
3163 4896 0.251608 AACCAGGCCATAACACCCAC 60.252 55.000 5.01 0.00 0.00 4.61
3164 4897 1.382240 CCAGGCCATAACACCCACA 59.618 57.895 5.01 0.00 0.00 4.17
3165 4898 0.251564 CCAGGCCATAACACCCACAA 60.252 55.000 5.01 0.00 0.00 3.33
3166 4899 0.887933 CAGGCCATAACACCCACAAC 59.112 55.000 5.01 0.00 0.00 3.32
3167 4900 0.480690 AGGCCATAACACCCACAACA 59.519 50.000 5.01 0.00 0.00 3.33
3168 4901 0.601057 GGCCATAACACCCACAACAC 59.399 55.000 0.00 0.00 0.00 3.32
3169 4902 0.601057 GCCATAACACCCACAACACC 59.399 55.000 0.00 0.00 0.00 4.16
3170 4903 1.821666 GCCATAACACCCACAACACCT 60.822 52.381 0.00 0.00 0.00 4.00
3171 4904 2.159382 CCATAACACCCACAACACCTC 58.841 52.381 0.00 0.00 0.00 3.85
3172 4905 2.159382 CATAACACCCACAACACCTCC 58.841 52.381 0.00 0.00 0.00 4.30
3173 4906 0.475044 TAACACCCACAACACCTCCC 59.525 55.000 0.00 0.00 0.00 4.30
3174 4907 2.115266 CACCCACAACACCTCCCC 59.885 66.667 0.00 0.00 0.00 4.81
3175 4908 3.182996 ACCCACAACACCTCCCCC 61.183 66.667 0.00 0.00 0.00 5.40
3176 4909 3.182263 CCCACAACACCTCCCCCA 61.182 66.667 0.00 0.00 0.00 4.96
3177 4910 2.436109 CCACAACACCTCCCCCAG 59.564 66.667 0.00 0.00 0.00 4.45
3178 4911 2.153401 CCACAACACCTCCCCCAGA 61.153 63.158 0.00 0.00 0.00 3.86
3179 4912 1.073199 CACAACACCTCCCCCAGAC 59.927 63.158 0.00 0.00 0.00 3.51
3180 4913 2.347490 CAACACCTCCCCCAGACG 59.653 66.667 0.00 0.00 0.00 4.18
3181 4914 2.203182 AACACCTCCCCCAGACGA 59.797 61.111 0.00 0.00 0.00 4.20
3182 4915 2.214920 AACACCTCCCCCAGACGAC 61.215 63.158 0.00 0.00 0.00 4.34
3183 4916 2.283966 CACCTCCCCCAGACGACT 60.284 66.667 0.00 0.00 0.00 4.18
3184 4917 1.000019 CACCTCCCCCAGACGACTA 60.000 63.158 0.00 0.00 0.00 2.59
3185 4918 1.038130 CACCTCCCCCAGACGACTAG 61.038 65.000 0.00 0.00 0.00 2.57
3186 4919 1.306970 CCTCCCCCAGACGACTAGT 59.693 63.158 0.00 0.00 0.00 2.57
3187 4920 0.324460 CCTCCCCCAGACGACTAGTT 60.324 60.000 0.00 0.00 0.00 2.24
3188 4921 1.104630 CTCCCCCAGACGACTAGTTC 58.895 60.000 0.00 0.00 0.00 3.01
3189 4922 0.406750 TCCCCCAGACGACTAGTTCA 59.593 55.000 0.00 0.00 0.00 3.18
3190 4923 1.203087 TCCCCCAGACGACTAGTTCAA 60.203 52.381 0.00 0.00 0.00 2.69
3191 4924 1.621814 CCCCCAGACGACTAGTTCAAA 59.378 52.381 0.00 0.00 0.00 2.69
3192 4925 2.612221 CCCCCAGACGACTAGTTCAAAC 60.612 54.545 0.00 0.00 0.00 2.93
3193 4926 2.612221 CCCCAGACGACTAGTTCAAACC 60.612 54.545 0.00 0.00 0.00 3.27
3194 4927 2.036733 CCCAGACGACTAGTTCAAACCA 59.963 50.000 0.00 0.00 0.00 3.67
3195 4928 3.306780 CCCAGACGACTAGTTCAAACCAT 60.307 47.826 0.00 0.00 0.00 3.55
3196 4929 3.927142 CCAGACGACTAGTTCAAACCATC 59.073 47.826 0.00 0.00 0.00 3.51
3197 4930 4.556233 CAGACGACTAGTTCAAACCATCA 58.444 43.478 0.00 0.00 0.00 3.07
3198 4931 4.988540 CAGACGACTAGTTCAAACCATCAA 59.011 41.667 0.00 0.00 0.00 2.57
3199 4932 4.989168 AGACGACTAGTTCAAACCATCAAC 59.011 41.667 0.00 0.00 0.00 3.18
3200 4933 3.739300 ACGACTAGTTCAAACCATCAACG 59.261 43.478 0.00 0.00 0.00 4.10
3201 4934 3.985279 CGACTAGTTCAAACCATCAACGA 59.015 43.478 0.00 0.00 0.00 3.85
3202 4935 4.090066 CGACTAGTTCAAACCATCAACGAG 59.910 45.833 0.00 0.00 0.00 4.18
3203 4936 3.746492 ACTAGTTCAAACCATCAACGAGC 59.254 43.478 0.00 0.00 0.00 5.03
3204 4937 2.571212 AGTTCAAACCATCAACGAGCA 58.429 42.857 0.00 0.00 0.00 4.26
3205 4938 3.149196 AGTTCAAACCATCAACGAGCAT 58.851 40.909 0.00 0.00 0.00 3.79
3206 4939 4.323417 AGTTCAAACCATCAACGAGCATA 58.677 39.130 0.00 0.00 0.00 3.14
3207 4940 4.759693 AGTTCAAACCATCAACGAGCATAA 59.240 37.500 0.00 0.00 0.00 1.90
3208 4941 5.240623 AGTTCAAACCATCAACGAGCATAAA 59.759 36.000 0.00 0.00 0.00 1.40
3209 4942 5.697473 TCAAACCATCAACGAGCATAAAA 57.303 34.783 0.00 0.00 0.00 1.52
3210 4943 5.698832 TCAAACCATCAACGAGCATAAAAG 58.301 37.500 0.00 0.00 0.00 2.27
3211 4944 5.240623 TCAAACCATCAACGAGCATAAAAGT 59.759 36.000 0.00 0.00 0.00 2.66
3212 4945 5.705609 AACCATCAACGAGCATAAAAGTT 57.294 34.783 0.00 0.00 0.00 2.66
3213 4946 5.296813 ACCATCAACGAGCATAAAAGTTC 57.703 39.130 0.00 0.00 0.00 3.01
3214 4947 4.759693 ACCATCAACGAGCATAAAAGTTCA 59.240 37.500 0.00 0.00 0.00 3.18
3215 4948 5.106555 ACCATCAACGAGCATAAAAGTTCAG 60.107 40.000 0.00 0.00 0.00 3.02
3216 4949 4.404507 TCAACGAGCATAAAAGTTCAGC 57.595 40.909 0.00 0.00 0.00 4.26
3217 4950 4.065088 TCAACGAGCATAAAAGTTCAGCT 58.935 39.130 0.00 0.00 38.43 4.24
3218 4951 5.234752 TCAACGAGCATAAAAGTTCAGCTA 58.765 37.500 0.00 0.00 35.36 3.32
3219 4952 5.699001 TCAACGAGCATAAAAGTTCAGCTAA 59.301 36.000 0.00 0.00 35.36 3.09
3220 4953 5.786401 ACGAGCATAAAAGTTCAGCTAAG 57.214 39.130 0.00 0.00 35.36 2.18
3221 4954 5.238583 ACGAGCATAAAAGTTCAGCTAAGT 58.761 37.500 0.00 0.00 35.36 2.24
3222 4955 5.701290 ACGAGCATAAAAGTTCAGCTAAGTT 59.299 36.000 0.00 0.00 35.36 2.66
3223 4956 6.872020 ACGAGCATAAAAGTTCAGCTAAGTTA 59.128 34.615 0.00 0.00 35.36 2.24
3224 4957 7.549488 ACGAGCATAAAAGTTCAGCTAAGTTAT 59.451 33.333 0.00 0.00 35.36 1.89
3225 4958 8.391106 CGAGCATAAAAGTTCAGCTAAGTTATT 58.609 33.333 0.00 0.00 35.36 1.40
3235 4968 9.331282 AGTTCAGCTAAGTTATTACAATCATCC 57.669 33.333 0.00 0.00 0.00 3.51
3236 4969 9.109393 GTTCAGCTAAGTTATTACAATCATCCA 57.891 33.333 0.00 0.00 0.00 3.41
3237 4970 8.893219 TCAGCTAAGTTATTACAATCATCCAG 57.107 34.615 0.00 0.00 0.00 3.86
3238 4971 8.704668 TCAGCTAAGTTATTACAATCATCCAGA 58.295 33.333 0.00 0.00 0.00 3.86
3239 4972 8.768955 CAGCTAAGTTATTACAATCATCCAGAC 58.231 37.037 0.00 0.00 0.00 3.51
3240 4973 8.709308 AGCTAAGTTATTACAATCATCCAGACT 58.291 33.333 0.00 0.00 0.00 3.24
3241 4974 8.983724 GCTAAGTTATTACAATCATCCAGACTC 58.016 37.037 0.00 0.00 0.00 3.36
3244 4977 9.739276 AAGTTATTACAATCATCCAGACTCAAA 57.261 29.630 0.00 0.00 0.00 2.69
3245 4978 9.739276 AGTTATTACAATCATCCAGACTCAAAA 57.261 29.630 0.00 0.00 0.00 2.44
3246 4979 9.994432 GTTATTACAATCATCCAGACTCAAAAG 57.006 33.333 0.00 0.00 0.00 2.27
3247 4980 9.958180 TTATTACAATCATCCAGACTCAAAAGA 57.042 29.630 0.00 0.00 0.00 2.52
3248 4981 8.868522 ATTACAATCATCCAGACTCAAAAGAA 57.131 30.769 0.00 0.00 0.00 2.52
3249 4982 8.690203 TTACAATCATCCAGACTCAAAAGAAA 57.310 30.769 0.00 0.00 0.00 2.52
3250 4983 6.974965 ACAATCATCCAGACTCAAAAGAAAC 58.025 36.000 0.00 0.00 0.00 2.78
3251 4984 6.015940 ACAATCATCCAGACTCAAAAGAAACC 60.016 38.462 0.00 0.00 0.00 3.27
3252 4985 5.047566 TCATCCAGACTCAAAAGAAACCA 57.952 39.130 0.00 0.00 0.00 3.67
3253 4986 5.065914 TCATCCAGACTCAAAAGAAACCAG 58.934 41.667 0.00 0.00 0.00 4.00
3254 4987 3.820557 TCCAGACTCAAAAGAAACCAGG 58.179 45.455 0.00 0.00 0.00 4.45
3255 4988 2.294512 CCAGACTCAAAAGAAACCAGGC 59.705 50.000 0.00 0.00 0.00 4.85
3256 4989 3.217626 CAGACTCAAAAGAAACCAGGCT 58.782 45.455 0.00 0.00 0.00 4.58
3257 4990 4.389374 CAGACTCAAAAGAAACCAGGCTA 58.611 43.478 0.00 0.00 0.00 3.93
3258 4991 4.214332 CAGACTCAAAAGAAACCAGGCTAC 59.786 45.833 0.00 0.00 0.00 3.58
3259 4992 3.139077 ACTCAAAAGAAACCAGGCTACG 58.861 45.455 0.00 0.00 0.00 3.51
3260 4993 3.181458 ACTCAAAAGAAACCAGGCTACGA 60.181 43.478 0.00 0.00 0.00 3.43
3261 4994 3.399330 TCAAAAGAAACCAGGCTACGAG 58.601 45.455 0.00 0.00 0.00 4.18
3262 4995 1.809684 AAAGAAACCAGGCTACGAGC 58.190 50.000 0.00 0.00 41.46 5.03
3263 4996 0.977395 AAGAAACCAGGCTACGAGCT 59.023 50.000 6.78 0.00 41.99 4.09
3264 4997 1.848652 AGAAACCAGGCTACGAGCTA 58.151 50.000 6.78 0.00 41.99 3.32
3265 4998 1.477295 AGAAACCAGGCTACGAGCTAC 59.523 52.381 6.78 0.00 41.99 3.58
3267 5000 2.026301 CCAGGCTACGAGCTACGC 59.974 66.667 5.63 0.00 46.94 4.42
3268 5001 2.771639 CCAGGCTACGAGCTACGCA 61.772 63.158 5.63 0.00 46.94 5.24
3269 5002 1.138883 CAGGCTACGAGCTACGCAA 59.861 57.895 5.63 0.00 46.94 4.85
3270 5003 0.457853 CAGGCTACGAGCTACGCAAA 60.458 55.000 5.63 0.00 46.94 3.68
3271 5004 0.245539 AGGCTACGAGCTACGCAAAA 59.754 50.000 5.63 0.00 46.94 2.44
3272 5005 0.645868 GGCTACGAGCTACGCAAAAG 59.354 55.000 5.63 1.34 46.94 2.27
3273 5006 1.625616 GCTACGAGCTACGCAAAAGA 58.374 50.000 5.63 0.00 46.94 2.52
3274 5007 1.990563 GCTACGAGCTACGCAAAAGAA 59.009 47.619 5.63 0.00 46.94 2.52
3275 5008 2.410730 GCTACGAGCTACGCAAAAGAAA 59.589 45.455 5.63 0.00 46.94 2.52
3276 5009 3.482112 GCTACGAGCTACGCAAAAGAAAG 60.482 47.826 5.63 0.00 46.94 2.62
3277 5010 2.750948 ACGAGCTACGCAAAAGAAAGA 58.249 42.857 5.63 0.00 46.94 2.52
3278 5011 2.731976 ACGAGCTACGCAAAAGAAAGAG 59.268 45.455 5.63 0.00 46.94 2.85
3279 5012 2.092838 CGAGCTACGCAAAAGAAAGAGG 59.907 50.000 0.00 0.00 34.51 3.69
3280 5013 1.807142 AGCTACGCAAAAGAAAGAGGC 59.193 47.619 0.00 0.00 0.00 4.70
3281 5014 1.807142 GCTACGCAAAAGAAAGAGGCT 59.193 47.619 0.00 0.00 0.00 4.58
3282 5015 3.000727 GCTACGCAAAAGAAAGAGGCTA 58.999 45.455 0.00 0.00 0.00 3.93
3283 5016 3.435671 GCTACGCAAAAGAAAGAGGCTAA 59.564 43.478 0.00 0.00 0.00 3.09
3284 5017 4.083484 GCTACGCAAAAGAAAGAGGCTAAA 60.083 41.667 0.00 0.00 0.00 1.85
3285 5018 4.911514 ACGCAAAAGAAAGAGGCTAAAA 57.088 36.364 0.00 0.00 0.00 1.52
3286 5019 4.607955 ACGCAAAAGAAAGAGGCTAAAAC 58.392 39.130 0.00 0.00 0.00 2.43
3287 5020 4.097286 ACGCAAAAGAAAGAGGCTAAAACA 59.903 37.500 0.00 0.00 0.00 2.83
3288 5021 5.040635 CGCAAAAGAAAGAGGCTAAAACAA 58.959 37.500 0.00 0.00 0.00 2.83
3289 5022 5.173854 CGCAAAAGAAAGAGGCTAAAACAAG 59.826 40.000 0.00 0.00 0.00 3.16
3290 5023 5.050769 GCAAAAGAAAGAGGCTAAAACAAGC 60.051 40.000 0.00 0.00 41.99 4.01
3291 5024 4.489679 AAGAAAGAGGCTAAAACAAGCG 57.510 40.909 0.00 0.00 43.74 4.68
3292 5025 2.226674 AGAAAGAGGCTAAAACAAGCGC 59.773 45.455 0.00 0.00 43.74 5.92
3293 5026 1.897560 AAGAGGCTAAAACAAGCGCT 58.102 45.000 2.64 2.64 43.74 5.92
3294 5027 2.762535 AGAGGCTAAAACAAGCGCTA 57.237 45.000 12.05 0.00 43.74 4.26
3295 5028 2.622436 AGAGGCTAAAACAAGCGCTAG 58.378 47.619 12.05 3.83 43.74 3.42
3296 5029 2.233922 AGAGGCTAAAACAAGCGCTAGA 59.766 45.455 12.05 0.00 43.74 2.43
3297 5030 3.000727 GAGGCTAAAACAAGCGCTAGAA 58.999 45.455 12.05 0.00 43.74 2.10
3298 5031 3.003480 AGGCTAAAACAAGCGCTAGAAG 58.997 45.455 12.05 3.65 43.74 2.85
3299 5032 2.476352 GGCTAAAACAAGCGCTAGAAGC 60.476 50.000 12.05 13.95 43.74 3.86
3300 5033 2.159627 GCTAAAACAAGCGCTAGAAGCA 59.840 45.455 12.05 0.00 42.58 3.91
3301 5034 3.364964 GCTAAAACAAGCGCTAGAAGCAA 60.365 43.478 12.05 0.00 42.58 3.91
3302 5035 2.977405 AAACAAGCGCTAGAAGCAAG 57.023 45.000 12.05 6.98 42.58 4.01
3303 5036 0.519077 AACAAGCGCTAGAAGCAAGC 59.481 50.000 12.05 0.00 42.58 4.01
3304 5037 0.603707 ACAAGCGCTAGAAGCAAGCA 60.604 50.000 12.05 0.00 42.58 3.91
3305 5038 0.096628 CAAGCGCTAGAAGCAAGCAG 59.903 55.000 12.05 0.00 42.58 4.24
3306 5039 1.642952 AAGCGCTAGAAGCAAGCAGC 61.643 55.000 12.05 0.00 42.58 5.25
3315 5048 4.240049 GCAAGCAGCAAAGCAGTC 57.760 55.556 0.00 0.00 44.79 3.51
3316 5049 1.372623 GCAAGCAGCAAAGCAGTCC 60.373 57.895 0.00 0.00 44.79 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.298300 GTTGCATGAAACAACGTCTCG 58.702 47.619 11.98 0.00 38.18 4.04
321 331 2.672098 CTGGTAGGCAGATGAGGTAGT 58.328 52.381 0.00 0.00 0.00 2.73
322 332 1.342819 GCTGGTAGGCAGATGAGGTAG 59.657 57.143 0.00 0.00 0.00 3.18
340 391 5.481473 TCCATTATTTCTTTTCCTTGCTGCT 59.519 36.000 0.00 0.00 0.00 4.24
344 395 5.111989 GCCTCCATTATTTCTTTTCCTTGC 58.888 41.667 0.00 0.00 0.00 4.01
345 396 5.187576 TGGCCTCCATTATTTCTTTTCCTTG 59.812 40.000 3.32 0.00 0.00 3.61
354 408 5.859205 AAATGTCTGGCCTCCATTATTTC 57.141 39.130 3.32 0.00 30.82 2.17
387 445 9.801714 CTTGTTTTATCATCAACATTCAAAAGC 57.198 29.630 0.00 0.00 32.96 3.51
597 764 1.808411 TTACAGTGCTACAGCTTGGC 58.192 50.000 2.44 0.00 42.66 4.52
956 1514 3.680786 CCCTCGCCTCACGTGTCA 61.681 66.667 16.51 0.00 44.19 3.58
990 1548 3.605749 AACTCCCATCCACGCACCG 62.606 63.158 0.00 0.00 0.00 4.94
1200 1779 2.033194 CGTCTTCTTGCCGTTCCCC 61.033 63.158 0.00 0.00 0.00 4.81
1205 1784 2.030562 CCACCGTCTTCTTGCCGT 59.969 61.111 0.00 0.00 0.00 5.68
1206 1785 2.027625 GTCCACCGTCTTCTTGCCG 61.028 63.158 0.00 0.00 0.00 5.69
1269 1848 2.264794 GTCATCTCGCCCACCGTT 59.735 61.111 0.00 0.00 38.35 4.44
1440 2022 3.617143 GAACCCGCCCTGGTACACC 62.617 68.421 0.00 0.00 37.76 4.16
1656 2252 1.001520 TGGCGAATCCGTCAGAAAGAA 59.998 47.619 0.00 0.00 46.40 2.52
1686 2282 2.053865 TTCGTGTAGGCCTACGGGG 61.054 63.158 32.52 24.35 40.48 5.73
1687 2283 1.140375 GTTCGTGTAGGCCTACGGG 59.860 63.158 32.52 26.54 40.48 5.28
1784 2380 8.375493 AGTGAATTAACCAGAGATGTAGGTAA 57.625 34.615 0.00 0.00 34.63 2.85
1787 2383 7.065085 CACAAGTGAATTAACCAGAGATGTAGG 59.935 40.741 0.00 0.00 0.00 3.18
1835 2437 2.033194 GGCACAGGACTTGCGTACC 61.033 63.158 0.00 0.00 41.18 3.34
1864 2466 1.134280 CATTCTCGTCCTGATTGGCCT 60.134 52.381 3.32 0.00 35.26 5.19
1897 2499 2.638480 AGTTTGGAAGTAGCACAGCA 57.362 45.000 0.00 0.00 0.00 4.41
1898 2500 3.142174 AGAAGTTTGGAAGTAGCACAGC 58.858 45.455 0.00 0.00 0.00 4.40
1899 2501 4.555511 GCAAGAAGTTTGGAAGTAGCACAG 60.556 45.833 0.00 0.00 0.00 3.66
1900 2502 3.315191 GCAAGAAGTTTGGAAGTAGCACA 59.685 43.478 0.00 0.00 0.00 4.57
1901 2503 3.565902 AGCAAGAAGTTTGGAAGTAGCAC 59.434 43.478 0.00 0.00 0.00 4.40
1903 2505 3.189495 GGAGCAAGAAGTTTGGAAGTAGC 59.811 47.826 0.00 0.00 0.00 3.58
1904 2506 3.433615 CGGAGCAAGAAGTTTGGAAGTAG 59.566 47.826 0.00 0.00 0.00 2.57
1905 2507 3.399330 CGGAGCAAGAAGTTTGGAAGTA 58.601 45.455 0.00 0.00 0.00 2.24
1919 2529 1.795170 GAAGCAAGCAACCGGAGCAA 61.795 55.000 21.98 0.00 0.00 3.91
1928 2538 1.540797 GCCATTGTTGGAAGCAAGCAA 60.541 47.619 0.00 0.00 46.92 3.91
1933 2543 0.821301 TCACGCCATTGTTGGAAGCA 60.821 50.000 0.00 0.00 46.92 3.91
1934 2544 0.527565 ATCACGCCATTGTTGGAAGC 59.472 50.000 0.00 0.00 46.92 3.86
1935 2545 2.086869 AGATCACGCCATTGTTGGAAG 58.913 47.619 0.00 0.00 46.92 3.46
1936 2546 2.198827 AGATCACGCCATTGTTGGAA 57.801 45.000 0.00 0.00 46.92 3.53
1937 2547 2.198827 AAGATCACGCCATTGTTGGA 57.801 45.000 0.00 0.00 46.92 3.53
1938 2548 2.489329 AGAAAGATCACGCCATTGTTGG 59.511 45.455 0.00 0.00 46.66 3.77
1939 2549 3.438087 AGAGAAAGATCACGCCATTGTTG 59.562 43.478 0.00 0.00 0.00 3.33
1944 2554 3.942829 TGAAAGAGAAAGATCACGCCAT 58.057 40.909 0.00 0.00 0.00 4.40
1948 2558 4.154737 TGGCATTGAAAGAGAAAGATCACG 59.845 41.667 0.00 0.00 0.00 4.35
2120 2830 6.761714 TGAAACGAGAAAAGAAACTTAGCTCT 59.238 34.615 0.00 0.00 0.00 4.09
2142 2852 3.854666 CAACACCAAACACAACCATGAA 58.145 40.909 0.00 0.00 0.00 2.57
2296 3012 0.390472 CAGAAGGAGGCCGAGTTGAC 60.390 60.000 0.00 0.00 0.00 3.18
2321 3037 3.230005 CTCTCTCGCCGTCGATCCG 62.230 68.421 0.00 0.00 44.56 4.18
2495 3240 1.730612 CAGACTGCACTGCACATACAG 59.269 52.381 0.00 0.00 43.59 2.74
2496 3241 1.070601 ACAGACTGCACTGCACATACA 59.929 47.619 1.25 0.00 41.06 2.29
2497 3242 1.728971 GACAGACTGCACTGCACATAC 59.271 52.381 1.25 0.00 41.06 2.39
2526 3271 2.541588 CCAACCAGAAACGAACTTGCAG 60.542 50.000 0.00 0.00 0.00 4.41
2561 3306 3.508762 CAAGAAAGATGCACTGATTGGC 58.491 45.455 0.00 0.00 0.00 4.52
2729 3486 7.323420 TGGGAGCATTTAGATCGATATGTTAG 58.677 38.462 2.01 0.00 32.03 2.34
2741 3498 5.185635 CCAATCAACTTTGGGAGCATTTAGA 59.814 40.000 0.00 0.00 42.09 2.10
2742 3499 5.185635 TCCAATCAACTTTGGGAGCATTTAG 59.814 40.000 3.56 0.00 45.21 1.85
2743 3500 5.083122 TCCAATCAACTTTGGGAGCATTTA 58.917 37.500 3.56 0.00 45.21 1.40
2744 3501 3.903090 TCCAATCAACTTTGGGAGCATTT 59.097 39.130 3.56 0.00 45.21 2.32
2745 3502 3.509442 TCCAATCAACTTTGGGAGCATT 58.491 40.909 3.56 0.00 45.21 3.56
2746 3503 3.173953 TCCAATCAACTTTGGGAGCAT 57.826 42.857 3.56 0.00 45.21 3.79
2747 3504 2.673775 TCCAATCAACTTTGGGAGCA 57.326 45.000 3.56 0.00 45.21 4.26
2748 3505 3.118992 GGATTCCAATCAACTTTGGGAGC 60.119 47.826 0.00 0.00 45.21 4.70
2749 3506 4.088634 TGGATTCCAATCAACTTTGGGAG 58.911 43.478 1.94 0.00 45.21 4.30
2750 3507 4.125124 TGGATTCCAATCAACTTTGGGA 57.875 40.909 1.94 0.00 45.21 4.37
2751 3508 4.527816 TCTTGGATTCCAATCAACTTTGGG 59.472 41.667 18.28 3.46 45.21 4.12
2753 3510 6.579666 TCTCTTGGATTCCAATCAACTTTG 57.420 37.500 18.28 4.83 43.07 2.77
2754 3511 5.184671 GCTCTCTTGGATTCCAATCAACTTT 59.815 40.000 18.28 0.00 43.07 2.66
2755 3512 4.704057 GCTCTCTTGGATTCCAATCAACTT 59.296 41.667 18.28 0.00 43.07 2.66
2756 3513 4.018597 AGCTCTCTTGGATTCCAATCAACT 60.019 41.667 18.28 9.75 43.07 3.16
2757 3514 4.268359 AGCTCTCTTGGATTCCAATCAAC 58.732 43.478 18.28 7.80 43.07 3.18
2759 3516 4.581309 AAGCTCTCTTGGATTCCAATCA 57.419 40.909 18.28 7.67 43.07 2.57
2760 3517 4.946157 TGAAAGCTCTCTTGGATTCCAATC 59.054 41.667 18.28 10.77 43.07 2.67
2761 3518 4.927049 TGAAAGCTCTCTTGGATTCCAAT 58.073 39.130 18.28 1.12 43.07 3.16
2780 3537 8.623903 GGATATCAATTTACATGAGTTGCTGAA 58.376 33.333 4.83 0.00 0.00 3.02
2783 4516 6.205464 CCGGATATCAATTTACATGAGTTGCT 59.795 38.462 0.00 0.00 0.00 3.91
2789 4522 4.000325 CCGCCGGATATCAATTTACATGA 59.000 43.478 5.05 0.00 0.00 3.07
2791 4524 2.747446 GCCGCCGGATATCAATTTACAT 59.253 45.455 7.68 0.00 0.00 2.29
2795 4528 1.608590 CTTGCCGCCGGATATCAATTT 59.391 47.619 7.68 0.00 0.00 1.82
2798 4531 1.891919 GCTTGCCGCCGGATATCAA 60.892 57.895 7.68 0.00 0.00 2.57
2800 4533 3.414700 CGCTTGCCGCCGGATATC 61.415 66.667 7.68 0.00 34.21 1.63
2812 4545 2.423185 TGTAAATTGCTGATCCCGCTTG 59.577 45.455 5.79 0.00 0.00 4.01
2813 4546 2.722094 TGTAAATTGCTGATCCCGCTT 58.278 42.857 5.79 0.00 0.00 4.68
2814 4547 2.418368 TGTAAATTGCTGATCCCGCT 57.582 45.000 5.79 0.00 0.00 5.52
2815 4548 3.502191 TTTGTAAATTGCTGATCCCGC 57.498 42.857 0.00 0.00 0.00 6.13
2816 4549 5.505173 AGATTTGTAAATTGCTGATCCCG 57.495 39.130 0.00 0.00 0.00 5.14
2847 4580 9.396022 CTGGGACTATCAATTTACACAAGTTAT 57.604 33.333 0.00 0.00 0.00 1.89
2848 4581 8.598916 TCTGGGACTATCAATTTACACAAGTTA 58.401 33.333 0.00 0.00 0.00 2.24
2849 4582 7.458397 TCTGGGACTATCAATTTACACAAGTT 58.542 34.615 0.00 0.00 0.00 2.66
2850 4583 7.016153 TCTGGGACTATCAATTTACACAAGT 57.984 36.000 0.00 0.00 0.00 3.16
2851 4584 7.331026 TCTCTGGGACTATCAATTTACACAAG 58.669 38.462 0.00 0.00 0.00 3.16
2852 4585 7.252612 TCTCTGGGACTATCAATTTACACAA 57.747 36.000 0.00 0.00 0.00 3.33
2853 4586 6.867519 TCTCTGGGACTATCAATTTACACA 57.132 37.500 0.00 0.00 0.00 3.72
2854 4587 8.561738 TTTTCTCTGGGACTATCAATTTACAC 57.438 34.615 0.00 0.00 0.00 2.90
2855 4588 8.602424 TCTTTTCTCTGGGACTATCAATTTACA 58.398 33.333 0.00 0.00 0.00 2.41
2856 4589 8.884726 GTCTTTTCTCTGGGACTATCAATTTAC 58.115 37.037 0.00 0.00 0.00 2.01
2857 4590 8.602424 TGTCTTTTCTCTGGGACTATCAATTTA 58.398 33.333 0.00 0.00 0.00 1.40
2858 4591 7.391833 GTGTCTTTTCTCTGGGACTATCAATTT 59.608 37.037 0.00 0.00 0.00 1.82
2859 4592 6.881602 GTGTCTTTTCTCTGGGACTATCAATT 59.118 38.462 0.00 0.00 0.00 2.32
2860 4593 6.214412 AGTGTCTTTTCTCTGGGACTATCAAT 59.786 38.462 0.00 0.00 0.00 2.57
2861 4594 5.544176 AGTGTCTTTTCTCTGGGACTATCAA 59.456 40.000 0.00 0.00 0.00 2.57
2862 4595 5.047021 CAGTGTCTTTTCTCTGGGACTATCA 60.047 44.000 0.00 0.00 0.00 2.15
2863 4596 5.186021 TCAGTGTCTTTTCTCTGGGACTATC 59.814 44.000 0.00 0.00 32.14 2.08
2864 4597 5.087323 TCAGTGTCTTTTCTCTGGGACTAT 58.913 41.667 0.00 0.00 32.14 2.12
2865 4598 4.480115 TCAGTGTCTTTTCTCTGGGACTA 58.520 43.478 0.00 0.00 32.14 2.59
2866 4599 3.309296 TCAGTGTCTTTTCTCTGGGACT 58.691 45.455 0.00 0.00 32.14 3.85
2867 4600 3.753294 TCAGTGTCTTTTCTCTGGGAC 57.247 47.619 0.00 0.00 32.14 4.46
2868 4601 6.183361 TGTTTATCAGTGTCTTTTCTCTGGGA 60.183 38.462 0.00 0.00 32.14 4.37
2869 4602 5.997746 TGTTTATCAGTGTCTTTTCTCTGGG 59.002 40.000 0.00 0.00 32.14 4.45
2870 4603 6.708054 AGTGTTTATCAGTGTCTTTTCTCTGG 59.292 38.462 0.00 0.00 32.14 3.86
2871 4604 7.721286 AGTGTTTATCAGTGTCTTTTCTCTG 57.279 36.000 0.00 0.00 0.00 3.35
2872 4605 7.442666 GGAAGTGTTTATCAGTGTCTTTTCTCT 59.557 37.037 0.00 0.00 0.00 3.10
2873 4606 7.226720 TGGAAGTGTTTATCAGTGTCTTTTCTC 59.773 37.037 0.00 0.00 0.00 2.87
2874 4607 7.054124 TGGAAGTGTTTATCAGTGTCTTTTCT 58.946 34.615 0.00 0.00 0.00 2.52
2875 4608 7.259290 TGGAAGTGTTTATCAGTGTCTTTTC 57.741 36.000 0.00 0.00 0.00 2.29
2876 4609 6.238759 GCTGGAAGTGTTTATCAGTGTCTTTT 60.239 38.462 0.00 0.00 35.30 2.27
2877 4610 5.239525 GCTGGAAGTGTTTATCAGTGTCTTT 59.760 40.000 0.00 0.00 35.30 2.52
2878 4611 4.757149 GCTGGAAGTGTTTATCAGTGTCTT 59.243 41.667 0.00 0.00 35.30 3.01
2879 4612 4.319177 GCTGGAAGTGTTTATCAGTGTCT 58.681 43.478 0.00 0.00 35.30 3.41
2880 4613 3.437049 GGCTGGAAGTGTTTATCAGTGTC 59.563 47.826 0.00 0.00 35.30 3.67
2881 4614 3.412386 GGCTGGAAGTGTTTATCAGTGT 58.588 45.455 0.00 0.00 35.30 3.55
2882 4615 2.416547 CGGCTGGAAGTGTTTATCAGTG 59.583 50.000 0.00 0.00 35.30 3.66
2883 4616 2.301870 TCGGCTGGAAGTGTTTATCAGT 59.698 45.455 0.00 0.00 35.30 3.41
2884 4617 2.972625 TCGGCTGGAAGTGTTTATCAG 58.027 47.619 0.00 0.00 35.30 2.90
2885 4618 3.627395 ATCGGCTGGAAGTGTTTATCA 57.373 42.857 0.00 0.00 35.30 2.15
2886 4619 4.201920 GGAAATCGGCTGGAAGTGTTTATC 60.202 45.833 0.00 0.00 35.30 1.75
2887 4620 3.694566 GGAAATCGGCTGGAAGTGTTTAT 59.305 43.478 0.00 0.00 35.30 1.40
2888 4621 3.078837 GGAAATCGGCTGGAAGTGTTTA 58.921 45.455 0.00 0.00 35.30 2.01
2889 4622 1.886542 GGAAATCGGCTGGAAGTGTTT 59.113 47.619 0.00 0.00 35.30 2.83
2890 4623 1.202879 TGGAAATCGGCTGGAAGTGTT 60.203 47.619 0.00 0.00 35.30 3.32
2891 4624 0.400213 TGGAAATCGGCTGGAAGTGT 59.600 50.000 0.00 0.00 35.30 3.55
2892 4625 1.755179 ATGGAAATCGGCTGGAAGTG 58.245 50.000 0.00 0.00 35.30 3.16
2893 4626 2.094675 CAATGGAAATCGGCTGGAAGT 58.905 47.619 0.00 0.00 35.30 3.01
2894 4627 1.202336 GCAATGGAAATCGGCTGGAAG 60.202 52.381 0.00 0.00 0.00 3.46
2895 4628 0.817013 GCAATGGAAATCGGCTGGAA 59.183 50.000 0.00 0.00 0.00 3.53
2896 4629 0.323269 TGCAATGGAAATCGGCTGGA 60.323 50.000 0.00 0.00 0.00 3.86
2897 4630 0.179129 GTGCAATGGAAATCGGCTGG 60.179 55.000 0.00 0.00 0.00 4.85
2898 4631 0.527113 TGTGCAATGGAAATCGGCTG 59.473 50.000 0.00 0.00 0.00 4.85
2899 4632 0.527565 GTGTGCAATGGAAATCGGCT 59.472 50.000 0.00 0.00 0.00 5.52
2900 4633 0.458370 GGTGTGCAATGGAAATCGGC 60.458 55.000 0.00 0.00 0.00 5.54
2901 4634 1.176527 AGGTGTGCAATGGAAATCGG 58.823 50.000 0.00 0.00 0.00 4.18
2902 4635 2.223021 CGTAGGTGTGCAATGGAAATCG 60.223 50.000 0.00 0.00 0.00 3.34
2903 4636 3.405170 CGTAGGTGTGCAATGGAAATC 57.595 47.619 0.00 0.00 0.00 2.17
2924 4657 3.343788 CTCGGCGGGTGAGACTCAC 62.344 68.421 24.76 24.76 46.23 3.51
2925 4658 2.838748 ATCTCGGCGGGTGAGACTCA 62.839 60.000 6.68 0.00 44.69 3.41
2926 4659 1.668101 AATCTCGGCGGGTGAGACTC 61.668 60.000 6.68 0.00 44.69 3.36
2927 4660 1.258445 AAATCTCGGCGGGTGAGACT 61.258 55.000 6.68 0.00 44.69 3.24
2928 4661 1.084370 CAAATCTCGGCGGGTGAGAC 61.084 60.000 6.68 0.00 44.69 3.36
2929 4662 1.218047 CAAATCTCGGCGGGTGAGA 59.782 57.895 6.68 1.88 45.84 3.27
2930 4663 2.464459 GCAAATCTCGGCGGGTGAG 61.464 63.158 6.68 0.00 34.72 3.51
2931 4664 2.435938 GCAAATCTCGGCGGGTGA 60.436 61.111 6.68 3.47 0.00 4.02
2932 4665 2.331893 TTGCAAATCTCGGCGGGTG 61.332 57.895 6.68 0.00 0.00 4.61
2933 4666 2.033448 TTGCAAATCTCGGCGGGT 59.967 55.556 6.68 0.00 0.00 5.28
2934 4667 2.485122 GTTGCAAATCTCGGCGGG 59.515 61.111 7.21 2.41 0.00 6.13
2935 4668 2.098298 CGTTGCAAATCTCGGCGG 59.902 61.111 7.21 0.00 0.00 6.13
2936 4669 2.098298 CCGTTGCAAATCTCGGCG 59.902 61.111 12.56 0.00 36.68 6.46
2938 4671 2.098298 CGCCGTTGCAAATCTCGG 59.902 61.111 18.91 18.91 44.86 4.63
2939 4672 1.225745 GTCGCCGTTGCAAATCTCG 60.226 57.895 0.00 0.00 37.32 4.04
2940 4673 1.355971 TAGTCGCCGTTGCAAATCTC 58.644 50.000 0.00 0.00 37.32 2.75
2941 4674 2.024176 ATAGTCGCCGTTGCAAATCT 57.976 45.000 0.00 0.00 37.32 2.40
2942 4675 2.440501 CAATAGTCGCCGTTGCAAATC 58.559 47.619 0.00 0.00 37.32 2.17
2943 4676 1.132262 CCAATAGTCGCCGTTGCAAAT 59.868 47.619 0.00 0.00 37.32 2.32
2944 4677 0.519519 CCAATAGTCGCCGTTGCAAA 59.480 50.000 0.00 0.00 37.32 3.68
2945 4678 1.302383 CCCAATAGTCGCCGTTGCAA 61.302 55.000 0.00 0.00 37.32 4.08
2946 4679 1.743623 CCCAATAGTCGCCGTTGCA 60.744 57.895 0.00 0.00 37.32 4.08
2947 4680 3.098555 CCCAATAGTCGCCGTTGC 58.901 61.111 0.00 0.00 0.00 4.17
2948 4681 1.429148 GAGCCCAATAGTCGCCGTTG 61.429 60.000 0.00 0.00 0.00 4.10
2949 4682 1.153429 GAGCCCAATAGTCGCCGTT 60.153 57.895 0.00 0.00 0.00 4.44
2950 4683 2.499685 GAGCCCAATAGTCGCCGT 59.500 61.111 0.00 0.00 0.00 5.68
2951 4684 2.280186 GGAGCCCAATAGTCGCCG 60.280 66.667 0.00 0.00 0.00 6.46
2952 4685 2.280186 CGGAGCCCAATAGTCGCC 60.280 66.667 0.00 0.00 0.00 5.54
2981 4714 1.533033 TTGAGCTGGGTGTCGGAGA 60.533 57.895 0.00 0.00 0.00 3.71
2982 4715 1.079543 CTTGAGCTGGGTGTCGGAG 60.080 63.158 0.00 0.00 0.00 4.63
2983 4716 3.059982 CTTGAGCTGGGTGTCGGA 58.940 61.111 0.00 0.00 0.00 4.55
2984 4717 2.743928 GCTTGAGCTGGGTGTCGG 60.744 66.667 0.00 0.00 38.21 4.79
3013 4746 7.352079 AGAAGCCTTCTCTTTCATTCAAAAA 57.648 32.000 0.00 0.00 34.07 1.94
3014 4747 6.966534 AGAAGCCTTCTCTTTCATTCAAAA 57.033 33.333 0.00 0.00 34.07 2.44
3027 4760 0.912006 GAGGGGGTGAGAAGCCTTCT 60.912 60.000 6.69 6.69 44.21 2.85
3028 4761 1.604915 GAGGGGGTGAGAAGCCTTC 59.395 63.158 0.00 0.00 0.00 3.46
3029 4762 1.925972 GGAGGGGGTGAGAAGCCTT 60.926 63.158 0.00 0.00 0.00 4.35
3030 4763 2.285743 GGAGGGGGTGAGAAGCCT 60.286 66.667 0.00 0.00 0.00 4.58
3031 4764 3.787001 CGGAGGGGGTGAGAAGCC 61.787 72.222 0.00 0.00 0.00 4.35
3032 4765 1.627297 AATCGGAGGGGGTGAGAAGC 61.627 60.000 0.00 0.00 0.00 3.86
3033 4766 0.912486 AAATCGGAGGGGGTGAGAAG 59.088 55.000 0.00 0.00 0.00 2.85
3034 4767 1.280998 GAAAATCGGAGGGGGTGAGAA 59.719 52.381 0.00 0.00 0.00 2.87
3035 4768 0.909623 GAAAATCGGAGGGGGTGAGA 59.090 55.000 0.00 0.00 0.00 3.27
3036 4769 0.618458 TGAAAATCGGAGGGGGTGAG 59.382 55.000 0.00 0.00 0.00 3.51
3037 4770 1.295020 ATGAAAATCGGAGGGGGTGA 58.705 50.000 0.00 0.00 0.00 4.02
3038 4771 2.143876 AATGAAAATCGGAGGGGGTG 57.856 50.000 0.00 0.00 0.00 4.61
3039 4772 4.079443 TCATTAATGAAAATCGGAGGGGGT 60.079 41.667 15.82 0.00 33.08 4.95
3040 4773 4.469657 TCATTAATGAAAATCGGAGGGGG 58.530 43.478 15.82 0.00 33.08 5.40
3052 4785 7.148255 CGAGGACTGATGGTTTTCATTAATGAA 60.148 37.037 23.86 23.86 44.42 2.57
3053 4786 6.316140 CGAGGACTGATGGTTTTCATTAATGA 59.684 38.462 14.23 14.23 35.97 2.57
3054 4787 6.458751 CCGAGGACTGATGGTTTTCATTAATG 60.459 42.308 9.29 9.29 35.97 1.90
3055 4788 5.590259 CCGAGGACTGATGGTTTTCATTAAT 59.410 40.000 0.00 0.00 35.97 1.40
3056 4789 4.941263 CCGAGGACTGATGGTTTTCATTAA 59.059 41.667 0.00 0.00 35.97 1.40
3057 4790 4.224147 TCCGAGGACTGATGGTTTTCATTA 59.776 41.667 0.00 0.00 35.97 1.90
3058 4791 3.009033 TCCGAGGACTGATGGTTTTCATT 59.991 43.478 0.00 0.00 35.97 2.57
3059 4792 2.571653 TCCGAGGACTGATGGTTTTCAT 59.428 45.455 0.00 0.00 39.13 2.57
3060 4793 1.974957 TCCGAGGACTGATGGTTTTCA 59.025 47.619 0.00 0.00 0.00 2.69
3061 4794 2.347731 GTCCGAGGACTGATGGTTTTC 58.652 52.381 14.61 0.00 41.57 2.29
3062 4795 2.474410 GTCCGAGGACTGATGGTTTT 57.526 50.000 14.61 0.00 41.57 2.43
3072 4805 1.731750 GCGTCTTTGTAGTCCGAGGAC 60.732 57.143 14.10 14.10 44.86 3.85
3073 4806 0.524862 GCGTCTTTGTAGTCCGAGGA 59.475 55.000 0.00 0.00 0.00 3.71
3074 4807 0.242825 TGCGTCTTTGTAGTCCGAGG 59.757 55.000 0.00 0.00 0.00 4.63
3075 4808 2.279582 ATGCGTCTTTGTAGTCCGAG 57.720 50.000 0.00 0.00 0.00 4.63
3076 4809 2.159338 GGTATGCGTCTTTGTAGTCCGA 60.159 50.000 0.00 0.00 0.00 4.55
3077 4810 2.190981 GGTATGCGTCTTTGTAGTCCG 58.809 52.381 0.00 0.00 0.00 4.79
3078 4811 3.241067 TGGTATGCGTCTTTGTAGTCC 57.759 47.619 0.00 0.00 0.00 3.85
3079 4812 3.062234 GCTTGGTATGCGTCTTTGTAGTC 59.938 47.826 0.00 0.00 0.00 2.59
3080 4813 3.000727 GCTTGGTATGCGTCTTTGTAGT 58.999 45.455 0.00 0.00 0.00 2.73
3081 4814 3.000041 TGCTTGGTATGCGTCTTTGTAG 59.000 45.455 0.00 0.00 0.00 2.74
3082 4815 3.046968 TGCTTGGTATGCGTCTTTGTA 57.953 42.857 0.00 0.00 0.00 2.41
3083 4816 1.890876 TGCTTGGTATGCGTCTTTGT 58.109 45.000 0.00 0.00 0.00 2.83
3084 4817 3.492421 AATGCTTGGTATGCGTCTTTG 57.508 42.857 0.00 0.00 0.00 2.77
3085 4818 4.519540 AAAATGCTTGGTATGCGTCTTT 57.480 36.364 0.00 0.00 0.00 2.52
3086 4819 4.022416 TGAAAAATGCTTGGTATGCGTCTT 60.022 37.500 0.00 0.00 0.00 3.01
3087 4820 3.505680 TGAAAAATGCTTGGTATGCGTCT 59.494 39.130 0.00 0.00 0.00 4.18
3088 4821 3.608073 GTGAAAAATGCTTGGTATGCGTC 59.392 43.478 0.00 0.00 0.00 5.19
3089 4822 3.255642 AGTGAAAAATGCTTGGTATGCGT 59.744 39.130 0.00 0.00 0.00 5.24
3090 4823 3.836949 AGTGAAAAATGCTTGGTATGCG 58.163 40.909 0.00 0.00 0.00 4.73
3091 4824 5.064441 AGAGTGAAAAATGCTTGGTATGC 57.936 39.130 0.00 0.00 0.00 3.14
3092 4825 6.742718 CGTTAGAGTGAAAAATGCTTGGTATG 59.257 38.462 0.00 0.00 0.00 2.39
3093 4826 6.128007 CCGTTAGAGTGAAAAATGCTTGGTAT 60.128 38.462 0.00 0.00 0.00 2.73
3094 4827 5.180492 CCGTTAGAGTGAAAAATGCTTGGTA 59.820 40.000 0.00 0.00 0.00 3.25
3095 4828 4.023193 CCGTTAGAGTGAAAAATGCTTGGT 60.023 41.667 0.00 0.00 0.00 3.67
3096 4829 4.475944 CCGTTAGAGTGAAAAATGCTTGG 58.524 43.478 0.00 0.00 0.00 3.61
3097 4830 4.215399 TCCCGTTAGAGTGAAAAATGCTTG 59.785 41.667 0.00 0.00 0.00 4.01
3098 4831 4.215613 GTCCCGTTAGAGTGAAAAATGCTT 59.784 41.667 0.00 0.00 0.00 3.91
3099 4832 3.751698 GTCCCGTTAGAGTGAAAAATGCT 59.248 43.478 0.00 0.00 0.00 3.79
3100 4833 3.424433 CGTCCCGTTAGAGTGAAAAATGC 60.424 47.826 0.00 0.00 0.00 3.56
3101 4834 3.124636 CCGTCCCGTTAGAGTGAAAAATG 59.875 47.826 0.00 0.00 0.00 2.32
3102 4835 3.332034 CCGTCCCGTTAGAGTGAAAAAT 58.668 45.455 0.00 0.00 0.00 1.82
3103 4836 2.548493 CCCGTCCCGTTAGAGTGAAAAA 60.548 50.000 0.00 0.00 0.00 1.94
3104 4837 1.001181 CCCGTCCCGTTAGAGTGAAAA 59.999 52.381 0.00 0.00 0.00 2.29
3105 4838 0.604578 CCCGTCCCGTTAGAGTGAAA 59.395 55.000 0.00 0.00 0.00 2.69
3106 4839 0.540365 ACCCGTCCCGTTAGAGTGAA 60.540 55.000 0.00 0.00 0.00 3.18
3107 4840 0.327924 TACCCGTCCCGTTAGAGTGA 59.672 55.000 0.00 0.00 0.00 3.41
3108 4841 1.066605 CATACCCGTCCCGTTAGAGTG 59.933 57.143 0.00 0.00 0.00 3.51
3109 4842 1.064463 TCATACCCGTCCCGTTAGAGT 60.064 52.381 0.00 0.00 0.00 3.24
3110 4843 1.607628 CTCATACCCGTCCCGTTAGAG 59.392 57.143 0.00 0.00 0.00 2.43
3111 4844 1.683943 CTCATACCCGTCCCGTTAGA 58.316 55.000 0.00 0.00 0.00 2.10
3112 4845 0.672342 CCTCATACCCGTCCCGTTAG 59.328 60.000 0.00 0.00 0.00 2.34
3113 4846 0.756442 CCCTCATACCCGTCCCGTTA 60.756 60.000 0.00 0.00 0.00 3.18
3114 4847 2.062177 CCCTCATACCCGTCCCGTT 61.062 63.158 0.00 0.00 0.00 4.44
3115 4848 2.443390 CCCTCATACCCGTCCCGT 60.443 66.667 0.00 0.00 0.00 5.28
3116 4849 2.123597 TCCCTCATACCCGTCCCG 60.124 66.667 0.00 0.00 0.00 5.14
3117 4850 1.075450 ACTCCCTCATACCCGTCCC 60.075 63.158 0.00 0.00 0.00 4.46
3118 4851 2.029307 GCACTCCCTCATACCCGTCC 62.029 65.000 0.00 0.00 0.00 4.79
3119 4852 1.442148 GCACTCCCTCATACCCGTC 59.558 63.158 0.00 0.00 0.00 4.79
3120 4853 2.064581 GGCACTCCCTCATACCCGT 61.065 63.158 0.00 0.00 0.00 5.28
3121 4854 2.063979 TGGCACTCCCTCATACCCG 61.064 63.158 0.00 0.00 0.00 5.28
3122 4855 1.271840 TGTGGCACTCCCTCATACCC 61.272 60.000 19.83 0.00 32.37 3.69
3123 4856 0.179000 CTGTGGCACTCCCTCATACC 59.821 60.000 19.83 0.00 36.57 2.73
3124 4857 0.462759 GCTGTGGCACTCCCTCATAC 60.463 60.000 19.83 0.00 36.57 2.39
3125 4858 0.909133 TGCTGTGGCACTCCCTCATA 60.909 55.000 19.83 0.00 44.28 2.15
3126 4859 2.226315 TGCTGTGGCACTCCCTCAT 61.226 57.895 19.83 0.00 44.28 2.90
3127 4860 2.848679 TGCTGTGGCACTCCCTCA 60.849 61.111 19.83 6.49 44.28 3.86
3137 4870 0.611618 TTATGGCCTGGTTGCTGTGG 60.612 55.000 3.32 0.00 0.00 4.17
3138 4871 0.527565 GTTATGGCCTGGTTGCTGTG 59.472 55.000 3.32 0.00 0.00 3.66
3139 4872 0.112218 TGTTATGGCCTGGTTGCTGT 59.888 50.000 3.32 0.00 0.00 4.40
3140 4873 0.527565 GTGTTATGGCCTGGTTGCTG 59.472 55.000 3.32 0.00 0.00 4.41
3141 4874 0.611896 GGTGTTATGGCCTGGTTGCT 60.612 55.000 3.32 0.00 0.00 3.91
3142 4875 1.604147 GGGTGTTATGGCCTGGTTGC 61.604 60.000 3.32 0.00 0.00 4.17
3143 4876 0.251564 TGGGTGTTATGGCCTGGTTG 60.252 55.000 3.32 0.00 0.00 3.77
3144 4877 0.251608 GTGGGTGTTATGGCCTGGTT 60.252 55.000 3.32 0.00 0.00 3.67
3145 4878 1.382629 GTGGGTGTTATGGCCTGGT 59.617 57.895 3.32 0.00 0.00 4.00
3146 4879 0.251564 TTGTGGGTGTTATGGCCTGG 60.252 55.000 3.32 0.00 0.00 4.45
3147 4880 0.887933 GTTGTGGGTGTTATGGCCTG 59.112 55.000 3.32 0.00 0.00 4.85
3148 4881 0.480690 TGTTGTGGGTGTTATGGCCT 59.519 50.000 3.32 0.00 0.00 5.19
3149 4882 0.601057 GTGTTGTGGGTGTTATGGCC 59.399 55.000 0.00 0.00 0.00 5.36
3150 4883 0.601057 GGTGTTGTGGGTGTTATGGC 59.399 55.000 0.00 0.00 0.00 4.40
3151 4884 2.159382 GAGGTGTTGTGGGTGTTATGG 58.841 52.381 0.00 0.00 0.00 2.74
3152 4885 2.159382 GGAGGTGTTGTGGGTGTTATG 58.841 52.381 0.00 0.00 0.00 1.90
3153 4886 1.074889 GGGAGGTGTTGTGGGTGTTAT 59.925 52.381 0.00 0.00 0.00 1.89
3154 4887 0.475044 GGGAGGTGTTGTGGGTGTTA 59.525 55.000 0.00 0.00 0.00 2.41
3155 4888 1.229076 GGGAGGTGTTGTGGGTGTT 59.771 57.895 0.00 0.00 0.00 3.32
3156 4889 2.763645 GGGGAGGTGTTGTGGGTGT 61.764 63.158 0.00 0.00 0.00 4.16
3157 4890 2.115266 GGGGAGGTGTTGTGGGTG 59.885 66.667 0.00 0.00 0.00 4.61
3158 4891 3.182996 GGGGGAGGTGTTGTGGGT 61.183 66.667 0.00 0.00 0.00 4.51
3159 4892 3.182263 TGGGGGAGGTGTTGTGGG 61.182 66.667 0.00 0.00 0.00 4.61
3160 4893 2.153401 TCTGGGGGAGGTGTTGTGG 61.153 63.158 0.00 0.00 0.00 4.17
3161 4894 1.073199 GTCTGGGGGAGGTGTTGTG 59.927 63.158 0.00 0.00 0.00 3.33
3162 4895 2.516888 CGTCTGGGGGAGGTGTTGT 61.517 63.158 0.00 0.00 0.00 3.32
3163 4896 2.214216 TCGTCTGGGGGAGGTGTTG 61.214 63.158 0.00 0.00 0.00 3.33
3164 4897 2.203182 TCGTCTGGGGGAGGTGTT 59.797 61.111 0.00 0.00 0.00 3.32
3165 4898 1.797018 TAGTCGTCTGGGGGAGGTGT 61.797 60.000 0.00 0.00 0.00 4.16
3166 4899 1.000019 TAGTCGTCTGGGGGAGGTG 60.000 63.158 0.00 0.00 0.00 4.00
3167 4900 1.306970 CTAGTCGTCTGGGGGAGGT 59.693 63.158 0.00 0.00 0.00 3.85
3168 4901 0.324460 AACTAGTCGTCTGGGGGAGG 60.324 60.000 0.00 0.00 0.00 4.30
3169 4902 1.104630 GAACTAGTCGTCTGGGGGAG 58.895 60.000 0.00 0.00 0.00 4.30
3170 4903 0.406750 TGAACTAGTCGTCTGGGGGA 59.593 55.000 0.00 0.00 0.00 4.81
3171 4904 1.263356 TTGAACTAGTCGTCTGGGGG 58.737 55.000 0.00 0.00 0.00 5.40
3172 4905 2.612221 GGTTTGAACTAGTCGTCTGGGG 60.612 54.545 0.00 0.00 0.00 4.96
3173 4906 2.036733 TGGTTTGAACTAGTCGTCTGGG 59.963 50.000 0.00 0.00 0.00 4.45
3174 4907 3.380479 TGGTTTGAACTAGTCGTCTGG 57.620 47.619 0.00 0.00 0.00 3.86
3175 4908 4.556233 TGATGGTTTGAACTAGTCGTCTG 58.444 43.478 0.00 0.00 0.00 3.51
3176 4909 4.866508 TGATGGTTTGAACTAGTCGTCT 57.133 40.909 0.00 0.00 0.00 4.18
3177 4910 4.143389 CGTTGATGGTTTGAACTAGTCGTC 60.143 45.833 0.00 0.00 0.00 4.20
3178 4911 3.739300 CGTTGATGGTTTGAACTAGTCGT 59.261 43.478 0.00 0.00 0.00 4.34
3179 4912 3.985279 TCGTTGATGGTTTGAACTAGTCG 59.015 43.478 0.00 0.00 0.00 4.18
3180 4913 4.143094 GCTCGTTGATGGTTTGAACTAGTC 60.143 45.833 0.00 0.00 0.00 2.59
3181 4914 3.746492 GCTCGTTGATGGTTTGAACTAGT 59.254 43.478 0.00 0.00 0.00 2.57
3182 4915 3.745975 TGCTCGTTGATGGTTTGAACTAG 59.254 43.478 0.00 0.00 0.00 2.57
3183 4916 3.734463 TGCTCGTTGATGGTTTGAACTA 58.266 40.909 0.00 0.00 0.00 2.24
3184 4917 2.571212 TGCTCGTTGATGGTTTGAACT 58.429 42.857 0.00 0.00 0.00 3.01
3185 4918 3.559238 ATGCTCGTTGATGGTTTGAAC 57.441 42.857 0.00 0.00 0.00 3.18
3186 4919 5.697473 TTTATGCTCGTTGATGGTTTGAA 57.303 34.783 0.00 0.00 0.00 2.69
3187 4920 5.240623 ACTTTTATGCTCGTTGATGGTTTGA 59.759 36.000 0.00 0.00 0.00 2.69
3188 4921 5.460646 ACTTTTATGCTCGTTGATGGTTTG 58.539 37.500 0.00 0.00 0.00 2.93
3189 4922 5.705609 ACTTTTATGCTCGTTGATGGTTT 57.294 34.783 0.00 0.00 0.00 3.27
3190 4923 5.240623 TGAACTTTTATGCTCGTTGATGGTT 59.759 36.000 0.00 0.00 0.00 3.67
3191 4924 4.759693 TGAACTTTTATGCTCGTTGATGGT 59.240 37.500 0.00 0.00 0.00 3.55
3192 4925 5.295431 TGAACTTTTATGCTCGTTGATGG 57.705 39.130 0.00 0.00 0.00 3.51
3193 4926 4.790140 GCTGAACTTTTATGCTCGTTGATG 59.210 41.667 0.00 0.00 0.00 3.07
3194 4927 4.697352 AGCTGAACTTTTATGCTCGTTGAT 59.303 37.500 0.00 0.00 0.00 2.57
3195 4928 4.065088 AGCTGAACTTTTATGCTCGTTGA 58.935 39.130 0.00 0.00 0.00 3.18
3196 4929 4.410492 AGCTGAACTTTTATGCTCGTTG 57.590 40.909 0.00 0.00 0.00 4.10
3197 4930 5.701290 ACTTAGCTGAACTTTTATGCTCGTT 59.299 36.000 0.00 0.00 35.47 3.85
3198 4931 5.238583 ACTTAGCTGAACTTTTATGCTCGT 58.761 37.500 0.00 0.00 35.47 4.18
3199 4932 5.786401 ACTTAGCTGAACTTTTATGCTCG 57.214 39.130 0.00 0.00 35.47 5.03
3209 4942 9.331282 GGATGATTGTAATAACTTAGCTGAACT 57.669 33.333 0.00 0.00 0.00 3.01
3210 4943 9.109393 TGGATGATTGTAATAACTTAGCTGAAC 57.891 33.333 0.00 0.00 0.00 3.18
3211 4944 9.330063 CTGGATGATTGTAATAACTTAGCTGAA 57.670 33.333 0.00 0.00 0.00 3.02
3212 4945 8.704668 TCTGGATGATTGTAATAACTTAGCTGA 58.295 33.333 0.00 0.00 0.00 4.26
3213 4946 8.768955 GTCTGGATGATTGTAATAACTTAGCTG 58.231 37.037 0.00 0.00 0.00 4.24
3214 4947 8.709308 AGTCTGGATGATTGTAATAACTTAGCT 58.291 33.333 0.00 0.00 0.00 3.32
3215 4948 8.894768 AGTCTGGATGATTGTAATAACTTAGC 57.105 34.615 0.00 0.00 0.00 3.09
3218 4951 9.739276 TTTGAGTCTGGATGATTGTAATAACTT 57.261 29.630 0.00 0.00 0.00 2.66
3219 4952 9.739276 TTTTGAGTCTGGATGATTGTAATAACT 57.261 29.630 0.00 0.00 0.00 2.24
3220 4953 9.994432 CTTTTGAGTCTGGATGATTGTAATAAC 57.006 33.333 0.00 0.00 0.00 1.89
3221 4954 9.958180 TCTTTTGAGTCTGGATGATTGTAATAA 57.042 29.630 0.00 0.00 0.00 1.40
3222 4955 9.958180 TTCTTTTGAGTCTGGATGATTGTAATA 57.042 29.630 0.00 0.00 0.00 0.98
3223 4956 8.868522 TTCTTTTGAGTCTGGATGATTGTAAT 57.131 30.769 0.00 0.00 0.00 1.89
3224 4957 8.567948 GTTTCTTTTGAGTCTGGATGATTGTAA 58.432 33.333 0.00 0.00 0.00 2.41
3225 4958 7.174946 GGTTTCTTTTGAGTCTGGATGATTGTA 59.825 37.037 0.00 0.00 0.00 2.41
3226 4959 6.015940 GGTTTCTTTTGAGTCTGGATGATTGT 60.016 38.462 0.00 0.00 0.00 2.71
3227 4960 6.016024 TGGTTTCTTTTGAGTCTGGATGATTG 60.016 38.462 0.00 0.00 0.00 2.67
3228 4961 6.070656 TGGTTTCTTTTGAGTCTGGATGATT 58.929 36.000 0.00 0.00 0.00 2.57
3229 4962 5.634118 TGGTTTCTTTTGAGTCTGGATGAT 58.366 37.500 0.00 0.00 0.00 2.45
3230 4963 5.047566 TGGTTTCTTTTGAGTCTGGATGA 57.952 39.130 0.00 0.00 0.00 2.92
3231 4964 4.217118 CCTGGTTTCTTTTGAGTCTGGATG 59.783 45.833 0.00 0.00 0.00 3.51
3232 4965 4.401925 CCTGGTTTCTTTTGAGTCTGGAT 58.598 43.478 0.00 0.00 0.00 3.41
3233 4966 3.820557 CCTGGTTTCTTTTGAGTCTGGA 58.179 45.455 0.00 0.00 0.00 3.86
3234 4967 2.294512 GCCTGGTTTCTTTTGAGTCTGG 59.705 50.000 0.00 0.00 0.00 3.86
3235 4968 3.217626 AGCCTGGTTTCTTTTGAGTCTG 58.782 45.455 0.00 0.00 0.00 3.51
3236 4969 3.584733 AGCCTGGTTTCTTTTGAGTCT 57.415 42.857 0.00 0.00 0.00 3.24
3237 4970 3.186613 CGTAGCCTGGTTTCTTTTGAGTC 59.813 47.826 0.00 0.00 0.00 3.36
3238 4971 3.139077 CGTAGCCTGGTTTCTTTTGAGT 58.861 45.455 0.00 0.00 0.00 3.41
3239 4972 3.399330 TCGTAGCCTGGTTTCTTTTGAG 58.601 45.455 0.00 0.00 0.00 3.02
3240 4973 3.399330 CTCGTAGCCTGGTTTCTTTTGA 58.601 45.455 0.00 0.00 0.00 2.69
3241 4974 2.095718 GCTCGTAGCCTGGTTTCTTTTG 60.096 50.000 0.00 0.00 34.48 2.44
3242 4975 2.152016 GCTCGTAGCCTGGTTTCTTTT 58.848 47.619 0.00 0.00 34.48 2.27
3243 4976 1.348036 AGCTCGTAGCCTGGTTTCTTT 59.652 47.619 0.00 0.00 43.77 2.52
3244 4977 0.977395 AGCTCGTAGCCTGGTTTCTT 59.023 50.000 0.00 0.00 43.77 2.52
3245 4978 1.477295 GTAGCTCGTAGCCTGGTTTCT 59.523 52.381 0.00 0.00 43.77 2.52
3246 4979 1.798079 CGTAGCTCGTAGCCTGGTTTC 60.798 57.143 0.00 0.00 43.77 2.78
3247 4980 0.172803 CGTAGCTCGTAGCCTGGTTT 59.827 55.000 0.00 0.00 43.77 3.27
3248 4981 1.807886 CGTAGCTCGTAGCCTGGTT 59.192 57.895 0.00 0.00 43.77 3.67
3249 4982 3.510846 CGTAGCTCGTAGCCTGGT 58.489 61.111 0.00 0.00 43.77 4.00
3262 4995 5.607119 TTTAGCCTCTTTCTTTTGCGTAG 57.393 39.130 0.00 0.00 0.00 3.51
3263 4996 5.297278 TGTTTTAGCCTCTTTCTTTTGCGTA 59.703 36.000 0.00 0.00 0.00 4.42
3264 4997 4.097286 TGTTTTAGCCTCTTTCTTTTGCGT 59.903 37.500 0.00 0.00 0.00 5.24
3265 4998 4.606961 TGTTTTAGCCTCTTTCTTTTGCG 58.393 39.130 0.00 0.00 0.00 4.85
3266 4999 5.050769 GCTTGTTTTAGCCTCTTTCTTTTGC 60.051 40.000 0.00 0.00 35.06 3.68
3267 5000 5.173854 CGCTTGTTTTAGCCTCTTTCTTTTG 59.826 40.000 0.00 0.00 37.90 2.44
3268 5001 5.281727 CGCTTGTTTTAGCCTCTTTCTTTT 58.718 37.500 0.00 0.00 37.90 2.27
3269 5002 4.793028 GCGCTTGTTTTAGCCTCTTTCTTT 60.793 41.667 0.00 0.00 37.90 2.52
3270 5003 3.304726 GCGCTTGTTTTAGCCTCTTTCTT 60.305 43.478 0.00 0.00 37.90 2.52
3271 5004 2.226674 GCGCTTGTTTTAGCCTCTTTCT 59.773 45.455 0.00 0.00 37.90 2.52
3272 5005 2.226674 AGCGCTTGTTTTAGCCTCTTTC 59.773 45.455 2.64 0.00 37.90 2.62
3273 5006 2.230660 AGCGCTTGTTTTAGCCTCTTT 58.769 42.857 2.64 0.00 37.90 2.52
3274 5007 1.897560 AGCGCTTGTTTTAGCCTCTT 58.102 45.000 2.64 0.00 37.90 2.85
3275 5008 2.233922 TCTAGCGCTTGTTTTAGCCTCT 59.766 45.455 18.68 0.00 37.90 3.69
3276 5009 2.618053 TCTAGCGCTTGTTTTAGCCTC 58.382 47.619 18.68 0.00 37.90 4.70
3277 5010 2.762535 TCTAGCGCTTGTTTTAGCCT 57.237 45.000 18.68 0.00 37.90 4.58
3278 5011 2.476352 GCTTCTAGCGCTTGTTTTAGCC 60.476 50.000 18.68 4.06 37.90 3.93
3279 5012 2.159627 TGCTTCTAGCGCTTGTTTTAGC 59.840 45.455 18.68 20.03 46.26 3.09
3280 5013 4.398247 CTTGCTTCTAGCGCTTGTTTTAG 58.602 43.478 18.68 5.59 46.26 1.85
3281 5014 3.364964 GCTTGCTTCTAGCGCTTGTTTTA 60.365 43.478 18.68 0.00 46.26 1.52
3282 5015 2.605580 GCTTGCTTCTAGCGCTTGTTTT 60.606 45.455 18.68 0.00 46.26 2.43
3283 5016 1.068954 GCTTGCTTCTAGCGCTTGTTT 60.069 47.619 18.68 0.00 46.26 2.83
3284 5017 0.519077 GCTTGCTTCTAGCGCTTGTT 59.481 50.000 18.68 0.00 46.26 2.83
3285 5018 0.603707 TGCTTGCTTCTAGCGCTTGT 60.604 50.000 18.68 0.00 46.26 3.16
3286 5019 0.096628 CTGCTTGCTTCTAGCGCTTG 59.903 55.000 18.68 15.42 46.26 4.01
3287 5020 1.642952 GCTGCTTGCTTCTAGCGCTT 61.643 55.000 18.68 0.00 46.26 4.68
3288 5021 2.105466 GCTGCTTGCTTCTAGCGCT 61.105 57.895 17.26 17.26 46.26 5.92
3289 5022 1.915614 TTGCTGCTTGCTTCTAGCGC 61.916 55.000 0.00 0.00 46.26 5.92
3290 5023 0.518636 TTTGCTGCTTGCTTCTAGCG 59.481 50.000 0.00 0.00 46.26 4.26
3291 5024 1.731750 GCTTTGCTGCTTGCTTCTAGC 60.732 52.381 0.00 0.00 43.37 3.42
3292 5025 1.538512 TGCTTTGCTGCTTGCTTCTAG 59.461 47.619 0.00 0.00 43.37 2.43
3293 5026 1.538512 CTGCTTTGCTGCTTGCTTCTA 59.461 47.619 0.00 0.00 43.37 2.10
3294 5027 0.314302 CTGCTTTGCTGCTTGCTTCT 59.686 50.000 0.00 0.00 43.37 2.85
3295 5028 0.031721 ACTGCTTTGCTGCTTGCTTC 59.968 50.000 0.00 0.00 43.37 3.86
3296 5029 0.031721 GACTGCTTTGCTGCTTGCTT 59.968 50.000 0.00 0.00 43.37 3.91
3297 5030 1.658673 GACTGCTTTGCTGCTTGCT 59.341 52.632 0.00 0.00 43.37 3.91
3298 5031 1.372623 GGACTGCTTTGCTGCTTGC 60.373 57.895 0.00 3.23 43.25 4.01
3299 5032 4.959446 GGACTGCTTTGCTGCTTG 57.041 55.556 0.00 0.00 0.00 4.01



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.