Multiple sequence alignment - TraesCS2D01G093100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G093100 chr2D 100.000 3417 0 0 1 3417 44471305 44467889 0.000000e+00 6311.0
1 TraesCS2D01G093100 chr2D 89.977 1297 88 20 1010 2289 44339630 44340901 0.000000e+00 1637.0
2 TraesCS2D01G093100 chr2D 85.290 1346 136 42 948 2267 48028488 48027179 0.000000e+00 1332.0
3 TraesCS2D01G093100 chr2D 81.059 491 60 24 36 508 44370778 44371253 9.010000e-96 361.0
4 TraesCS2D01G093100 chr2D 78.967 271 38 8 2925 3193 44341342 44341595 2.110000e-37 167.0
5 TraesCS2D01G093100 chr2D 77.119 354 25 32 2473 2814 44340900 44341209 1.640000e-33 154.0
6 TraesCS2D01G093100 chr2D 84.800 125 15 3 3092 3216 44459302 44459422 4.630000e-24 122.0
7 TraesCS2D01G093100 chr2D 93.750 48 2 1 2975 3021 44371647 44371694 1.700000e-08 71.3
8 TraesCS2D01G093100 chr2A 91.009 1368 78 21 938 2298 48347650 48346321 0.000000e+00 1803.0
9 TraesCS2D01G093100 chr2A 89.312 1366 97 35 956 2300 48249786 48251123 0.000000e+00 1668.0
10 TraesCS2D01G093100 chr2A 95.842 481 20 0 1498 1978 48246378 48246858 0.000000e+00 778.0
11 TraesCS2D01G093100 chr2A 83.586 792 62 36 117 861 48248943 48249713 0.000000e+00 680.0
12 TraesCS2D01G093100 chr2A 91.116 439 34 3 1058 1491 48224272 48224710 1.060000e-164 590.0
13 TraesCS2D01G093100 chr2A 86.364 286 18 11 147 418 48349030 48348752 3.340000e-75 292.0
14 TraesCS2D01G093100 chr2A 80.769 260 25 11 280 522 48223692 48223943 2.710000e-41 180.0
15 TraesCS2D01G093100 chr2A 94.030 67 4 0 3152 3218 48333297 48333231 6.030000e-18 102.0
16 TraesCS2D01G093100 chr2A 88.372 86 6 3 792 873 48223940 48224025 2.170000e-17 100.0
17 TraesCS2D01G093100 chr2B 89.314 1385 100 25 939 2305 71293875 71292521 0.000000e+00 1694.0
18 TraesCS2D01G093100 chr2B 88.679 1378 88 35 938 2297 520970199 520968872 0.000000e+00 1618.0
19 TraesCS2D01G093100 chr2B 90.304 1248 91 18 1058 2291 71244393 71243162 0.000000e+00 1607.0
20 TraesCS2D01G093100 chr2B 93.000 800 43 5 1504 2300 70837292 70838081 0.000000e+00 1155.0
21 TraesCS2D01G093100 chr2B 81.767 883 81 38 42 877 70820619 70821468 0.000000e+00 665.0
22 TraesCS2D01G093100 chr2B 89.315 496 21 14 935 1424 70821653 70822122 8.160000e-166 593.0
23 TraesCS2D01G093100 chr2B 80.851 658 57 31 225 871 71294656 71294057 1.450000e-123 453.0
24 TraesCS2D01G093100 chr2B 78.628 379 41 26 2876 3250 520968176 520967834 7.430000e-52 215.0
25 TraesCS2D01G093100 chr2B 81.579 228 15 9 2587 2814 71243080 71242880 2.730000e-36 163.0
26 TraesCS2D01G093100 chr2B 76.860 363 39 27 160 508 520971226 520970895 2.730000e-36 163.0
27 TraesCS2D01G093100 chr2B 90.678 118 9 2 2587 2703 70838165 70838281 4.570000e-34 156.0
28 TraesCS2D01G093100 chr2B 77.679 224 26 16 207 423 75989401 75989607 7.750000e-22 115.0
29 TraesCS2D01G093100 chr2B 81.416 113 10 5 3140 3250 70839038 70839141 7.860000e-12 82.4
30 TraesCS2D01G093100 chr2B 97.674 43 1 0 1 43 66959885 66959843 1.320000e-09 75.0
31 TraesCS2D01G093100 chr2B 100.000 40 0 0 1 40 361634856 361634895 1.320000e-09 75.0
32 TraesCS2D01G093100 chr2B 100.000 29 0 0 903 931 70821587 70821615 2.000000e-03 54.7
33 TraesCS2D01G093100 chr4A 98.802 167 2 0 2301 2467 340701726 340701560 7.170000e-77 298.0
34 TraesCS2D01G093100 chr4A 98.225 169 3 0 2298 2466 556631380 556631212 2.580000e-76 296.0
35 TraesCS2D01G093100 chr4A 98.193 166 3 0 2301 2466 617455548 617455383 1.200000e-74 291.0
36 TraesCS2D01G093100 chr3A 98.214 168 3 0 2299 2466 31944341 31944174 9.270000e-76 294.0
37 TraesCS2D01G093100 chr3A 96.629 178 4 2 2296 2472 37458059 37457883 9.270000e-76 294.0
38 TraesCS2D01G093100 chr3A 100.000 39 0 0 1 39 114421233 114421271 4.730000e-09 73.1
39 TraesCS2D01G093100 chr4D 94.737 190 6 4 2286 2473 468588062 468587875 3.340000e-75 292.0
40 TraesCS2D01G093100 chr7B 97.619 168 4 0 2300 2467 715570903 715571070 4.310000e-74 289.0
41 TraesCS2D01G093100 chr7B 88.827 179 12 5 3105 3277 742104868 742104692 2.670000e-51 213.0
42 TraesCS2D01G093100 chr7B 77.627 295 47 15 1893 2171 744723965 744723674 9.810000e-36 161.0
43 TraesCS2D01G093100 chr7B 97.674 43 1 0 1 43 664957401 664957359 1.320000e-09 75.0
44 TraesCS2D01G093100 chr4B 97.619 168 4 0 2299 2466 149990028 149989861 4.310000e-74 289.0
45 TraesCS2D01G093100 chr4B 97.674 43 1 0 1 43 665320203 665320161 1.320000e-09 75.0
46 TraesCS2D01G093100 chr1B 97.605 167 4 0 2300 2466 41750569 41750735 1.550000e-73 287.0
47 TraesCS2D01G093100 chr7A 100.000 41 0 0 1 41 632597259 632597299 3.660000e-10 76.8
48 TraesCS2D01G093100 chrUn 100.000 40 0 0 1 40 35797569 35797608 1.320000e-09 75.0
49 TraesCS2D01G093100 chrUn 100.000 40 0 0 1 40 48224311 48224272 1.320000e-09 75.0
50 TraesCS2D01G093100 chr3B 97.674 43 1 0 1 43 719883346 719883304 1.320000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G093100 chr2D 44467889 44471305 3416 True 6311.000000 6311 100.000000 1 3417 1 chr2D.!!$R1 3416
1 TraesCS2D01G093100 chr2D 48027179 48028488 1309 True 1332.000000 1332 85.290000 948 2267 1 chr2D.!!$R2 1319
2 TraesCS2D01G093100 chr2D 44339630 44341595 1965 False 652.666667 1637 82.021000 1010 3193 3 chr2D.!!$F2 2183
3 TraesCS2D01G093100 chr2D 44370778 44371694 916 False 216.150000 361 87.404500 36 3021 2 chr2D.!!$F3 2985
4 TraesCS2D01G093100 chr2A 48346321 48349030 2709 True 1047.500000 1803 88.686500 147 2298 2 chr2A.!!$R2 2151
5 TraesCS2D01G093100 chr2A 48246378 48251123 4745 False 1042.000000 1668 89.580000 117 2300 3 chr2A.!!$F2 2183
6 TraesCS2D01G093100 chr2A 48223692 48224710 1018 False 290.000000 590 86.752333 280 1491 3 chr2A.!!$F1 1211
7 TraesCS2D01G093100 chr2B 71292521 71294656 2135 True 1073.500000 1694 85.082500 225 2305 2 chr2B.!!$R3 2080
8 TraesCS2D01G093100 chr2B 71242880 71244393 1513 True 885.000000 1607 85.941500 1058 2814 2 chr2B.!!$R2 1756
9 TraesCS2D01G093100 chr2B 520967834 520971226 3392 True 665.333333 1618 81.389000 160 3250 3 chr2B.!!$R4 3090
10 TraesCS2D01G093100 chr2B 70837292 70839141 1849 False 464.466667 1155 88.364667 1504 3250 3 chr2B.!!$F4 1746
11 TraesCS2D01G093100 chr2B 70820619 70822122 1503 False 437.566667 665 90.360667 42 1424 3 chr2B.!!$F3 1382

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
521 3051 0.107945 CTCCTGGCTCCTGCTACAAC 60.108 60.0 0.0 0.0 39.59 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2463 6114 0.1791 AATCATCCTGCGACGACCAG 60.179 55.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
24 25 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
25 26 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
27 28 1.142262 ACCACTGTCCACCTAACCAAC 59.858 52.381 0.00 0.00 0.00 3.77
28 29 1.420138 CCACTGTCCACCTAACCAACT 59.580 52.381 0.00 0.00 0.00 3.16
29 30 2.550208 CCACTGTCCACCTAACCAACTC 60.550 54.545 0.00 0.00 0.00 3.01
30 31 2.104111 CACTGTCCACCTAACCAACTCA 59.896 50.000 0.00 0.00 0.00 3.41
31 32 2.775384 ACTGTCCACCTAACCAACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
32 33 3.139077 CTGTCCACCTAACCAACTCAAC 58.861 50.000 0.00 0.00 0.00 3.18
33 34 2.158726 TGTCCACCTAACCAACTCAACC 60.159 50.000 0.00 0.00 0.00 3.77
34 35 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
39 40 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
40 41 1.762708 AACCAACTCAACCACAGGTG 58.237 50.000 0.00 0.00 35.34 4.00
76 77 0.249699 TCACCTTTGCGTCGTGACAT 60.250 50.000 0.41 0.00 31.74 3.06
87 98 3.567530 CGTCGTGACATGTACCACTTTA 58.432 45.455 13.87 0.07 0.00 1.85
102 113 5.899278 ACCACTTTACCCTGGACAATATTT 58.101 37.500 0.00 0.00 0.00 1.40
103 114 5.949952 ACCACTTTACCCTGGACAATATTTC 59.050 40.000 0.00 0.00 0.00 2.17
105 116 6.095440 CCACTTTACCCTGGACAATATTTCTG 59.905 42.308 0.00 0.00 0.00 3.02
106 117 6.095440 CACTTTACCCTGGACAATATTTCTGG 59.905 42.308 0.00 0.00 0.00 3.86
110 121 5.694995 ACCCTGGACAATATTTCTGGTATG 58.305 41.667 0.00 0.00 0.00 2.39
111 122 5.193728 ACCCTGGACAATATTTCTGGTATGT 59.806 40.000 0.00 0.00 0.00 2.29
112 123 6.388689 ACCCTGGACAATATTTCTGGTATGTA 59.611 38.462 0.00 0.00 0.00 2.29
113 124 6.710744 CCCTGGACAATATTTCTGGTATGTAC 59.289 42.308 0.00 0.00 0.00 2.90
114 125 7.279615 CCTGGACAATATTTCTGGTATGTACA 58.720 38.462 0.00 0.00 0.00 2.90
115 126 7.773224 CCTGGACAATATTTCTGGTATGTACAA 59.227 37.037 0.00 0.00 0.00 2.41
116 127 8.731275 TGGACAATATTTCTGGTATGTACAAG 57.269 34.615 0.00 0.00 0.00 3.16
117 128 8.325787 TGGACAATATTTCTGGTATGTACAAGT 58.674 33.333 0.00 0.00 0.00 3.16
145 2596 5.404946 AGTATCAAATTCACAATGCACAGC 58.595 37.500 0.00 0.00 0.00 4.40
182 2639 5.773575 TCATTATGTTATCCGTCTGAGCTC 58.226 41.667 6.82 6.82 0.00 4.09
192 2649 1.357907 GTCTGAGCTCATGACACAGC 58.642 55.000 27.33 10.92 35.73 4.40
246 2724 7.643569 TTGACCACATCATGTGCTAATTAAT 57.356 32.000 12.76 0.00 46.51 1.40
252 2730 9.333497 CCACATCATGTGCTAATTAATTTATCG 57.667 33.333 12.76 0.00 46.51 2.92
349 2840 2.639065 GTCGATCTCCTCTGTCTGTCT 58.361 52.381 0.00 0.00 0.00 3.41
350 2841 2.354510 GTCGATCTCCTCTGTCTGTCTG 59.645 54.545 0.00 0.00 0.00 3.51
351 2842 1.065401 CGATCTCCTCTGTCTGTCTGC 59.935 57.143 0.00 0.00 0.00 4.26
352 2843 1.408702 GATCTCCTCTGTCTGTCTGCC 59.591 57.143 0.00 0.00 0.00 4.85
359 2850 2.425312 CTCTGTCTGTCTGCCGTAGAAT 59.575 50.000 0.00 0.00 37.12 2.40
360 2851 2.826128 TCTGTCTGTCTGCCGTAGAATT 59.174 45.455 0.00 0.00 37.12 2.17
361 2852 3.258372 TCTGTCTGTCTGCCGTAGAATTT 59.742 43.478 0.00 0.00 37.12 1.82
402 2904 4.922206 TGCAGGGTGATTAGACAGAAAAT 58.078 39.130 0.00 0.00 0.00 1.82
436 2945 5.880887 GGAAAGAAATAGATTTCACGGGACT 59.119 40.000 15.51 0.00 46.50 3.85
438 2947 5.024785 AGAAATAGATTTCACGGGACTCC 57.975 43.478 15.51 0.00 46.50 3.85
439 2948 3.802685 GAAATAGATTTCACGGGACTCCG 59.197 47.826 9.61 3.04 46.96 4.63
477 2993 2.704572 AGACTCTGCCTGGATTTTTCG 58.295 47.619 0.00 0.00 0.00 3.46
481 2997 0.171903 CTGCCTGGATTTTTCGCCTG 59.828 55.000 0.00 0.00 0.00 4.85
499 3017 3.318017 CCTGTCTCTGTAAAACCGACAG 58.682 50.000 9.97 9.97 46.76 3.51
521 3051 0.107945 CTCCTGGCTCCTGCTACAAC 60.108 60.000 0.00 0.00 39.59 3.32
527 3059 0.321671 GCTCCTGCTACAACTGGTGA 59.678 55.000 0.00 0.00 36.03 4.02
540 3072 5.630121 ACAACTGGTGAACTGGATTGAATA 58.370 37.500 0.00 0.00 0.00 1.75
710 3250 0.593263 GACGAACCATACGCGGTAGG 60.593 60.000 12.47 11.46 38.76 3.18
722 3262 1.952102 GCGGTAGGAATGGTCGGTGA 61.952 60.000 0.00 0.00 0.00 4.02
723 3263 0.750850 CGGTAGGAATGGTCGGTGAT 59.249 55.000 0.00 0.00 0.00 3.06
724 3264 1.138266 CGGTAGGAATGGTCGGTGATT 59.862 52.381 0.00 0.00 0.00 2.57
725 3265 2.419574 CGGTAGGAATGGTCGGTGATTT 60.420 50.000 0.00 0.00 0.00 2.17
726 3266 3.617284 GGTAGGAATGGTCGGTGATTTT 58.383 45.455 0.00 0.00 0.00 1.82
727 3267 3.377172 GGTAGGAATGGTCGGTGATTTTG 59.623 47.826 0.00 0.00 0.00 2.44
728 3268 2.446435 AGGAATGGTCGGTGATTTTGG 58.554 47.619 0.00 0.00 0.00 3.28
729 3269 1.476488 GGAATGGTCGGTGATTTTGGG 59.524 52.381 0.00 0.00 0.00 4.12
736 3285 2.864343 GTCGGTGATTTTGGGAGTATCG 59.136 50.000 0.00 0.00 34.37 2.92
797 3517 6.382859 TGTCAGTTACCATATAAGGCAAGAGA 59.617 38.462 0.00 0.00 0.00 3.10
864 4358 7.273381 CACCGAAACAAATCAACCAAGAATATC 59.727 37.037 0.00 0.00 0.00 1.63
865 4359 7.040062 ACCGAAACAAATCAACCAAGAATATCA 60.040 33.333 0.00 0.00 0.00 2.15
866 4360 7.485913 CCGAAACAAATCAACCAAGAATATCAG 59.514 37.037 0.00 0.00 0.00 2.90
867 4361 8.236586 CGAAACAAATCAACCAAGAATATCAGA 58.763 33.333 0.00 0.00 0.00 3.27
868 4362 9.565213 GAAACAAATCAACCAAGAATATCAGAG 57.435 33.333 0.00 0.00 0.00 3.35
869 4363 8.868522 AACAAATCAACCAAGAATATCAGAGA 57.131 30.769 0.00 0.00 0.00 3.10
870 4364 8.503458 ACAAATCAACCAAGAATATCAGAGAG 57.497 34.615 0.00 0.00 0.00 3.20
871 4365 8.324306 ACAAATCAACCAAGAATATCAGAGAGA 58.676 33.333 0.00 0.00 0.00 3.10
872 4366 8.828644 CAAATCAACCAAGAATATCAGAGAGAG 58.171 37.037 0.00 0.00 0.00 3.20
873 4367 7.911130 ATCAACCAAGAATATCAGAGAGAGA 57.089 36.000 0.00 0.00 0.00 3.10
874 4368 7.345422 TCAACCAAGAATATCAGAGAGAGAG 57.655 40.000 0.00 0.00 0.00 3.20
875 4369 7.122048 TCAACCAAGAATATCAGAGAGAGAGA 58.878 38.462 0.00 0.00 0.00 3.10
876 4370 7.285172 TCAACCAAGAATATCAGAGAGAGAGAG 59.715 40.741 0.00 0.00 0.00 3.20
877 4371 6.910191 ACCAAGAATATCAGAGAGAGAGAGA 58.090 40.000 0.00 0.00 0.00 3.10
878 4372 7.000472 ACCAAGAATATCAGAGAGAGAGAGAG 59.000 42.308 0.00 0.00 0.00 3.20
879 4373 7.147320 ACCAAGAATATCAGAGAGAGAGAGAGA 60.147 40.741 0.00 0.00 0.00 3.10
880 4374 7.389884 CCAAGAATATCAGAGAGAGAGAGAGAG 59.610 44.444 0.00 0.00 0.00 3.20
881 4375 7.862274 AGAATATCAGAGAGAGAGAGAGAGA 57.138 40.000 0.00 0.00 0.00 3.10
882 4376 7.905265 AGAATATCAGAGAGAGAGAGAGAGAG 58.095 42.308 0.00 0.00 0.00 3.20
883 4377 7.732140 AGAATATCAGAGAGAGAGAGAGAGAGA 59.268 40.741 0.00 0.00 0.00 3.10
884 4378 5.804944 ATCAGAGAGAGAGAGAGAGAGAG 57.195 47.826 0.00 0.00 0.00 3.20
885 4379 4.871822 TCAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
886 4380 4.892345 TCAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
887 4381 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
888 4382 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
889 4383 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
890 4384 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
891 4385 5.960811 AGAGAGAGAGAGAGAGAGAGAGAAA 59.039 44.000 0.00 0.00 0.00 2.52
892 4386 6.098124 AGAGAGAGAGAGAGAGAGAGAGAAAG 59.902 46.154 0.00 0.00 0.00 2.62
893 4387 5.960811 AGAGAGAGAGAGAGAGAGAGAAAGA 59.039 44.000 0.00 0.00 0.00 2.52
894 4388 6.098124 AGAGAGAGAGAGAGAGAGAGAAAGAG 59.902 46.154 0.00 0.00 0.00 2.85
895 4389 5.960811 AGAGAGAGAGAGAGAGAGAAAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
896 4390 6.098124 AGAGAGAGAGAGAGAGAGAAAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
897 4391 5.960811 AGAGAGAGAGAGAGAGAAAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
898 4392 6.098124 AGAGAGAGAGAGAGAGAAAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
899 4393 5.960811 AGAGAGAGAGAGAGAAAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
900 4394 5.983540 AGAGAGAGAGAGAAAGAGAGAGAC 58.016 45.833 0.00 0.00 0.00 3.36
901 4395 5.104259 AGAGAGAGAGAAAGAGAGAGACC 57.896 47.826 0.00 0.00 0.00 3.85
902 4396 4.785376 AGAGAGAGAGAAAGAGAGAGACCT 59.215 45.833 0.00 0.00 0.00 3.85
903 4397 5.964477 AGAGAGAGAGAAAGAGAGAGACCTA 59.036 44.000 0.00 0.00 0.00 3.08
904 4398 6.617371 AGAGAGAGAGAAAGAGAGAGACCTAT 59.383 42.308 0.00 0.00 0.00 2.57
931 4425 5.745312 TGCTAGGAAAGTTCATCTCAGAA 57.255 39.130 0.00 0.00 0.00 3.02
932 4426 6.305272 TGCTAGGAAAGTTCATCTCAGAAT 57.695 37.500 0.00 0.00 0.00 2.40
933 4427 7.423844 TGCTAGGAAAGTTCATCTCAGAATA 57.576 36.000 0.00 0.00 0.00 1.75
949 4492 3.075884 AGAATAGTCGCGGATCTACTCC 58.924 50.000 6.13 0.00 41.07 3.85
961 4504 3.310860 CTACTCCACCCACCCACGC 62.311 68.421 0.00 0.00 0.00 5.34
985 4531 2.812011 CCCGTTGCCTATATAAAGCCAC 59.188 50.000 2.78 1.69 0.00 5.01
1003 4554 4.892965 GCAGGCACCACACCACCA 62.893 66.667 0.00 0.00 0.00 4.17
1004 4555 2.115910 CAGGCACCACACCACCAT 59.884 61.111 0.00 0.00 0.00 3.55
1005 4556 1.973281 CAGGCACCACACCACCATC 60.973 63.158 0.00 0.00 0.00 3.51
1006 4557 2.115052 GGCACCACACCACCATCA 59.885 61.111 0.00 0.00 0.00 3.07
1007 4558 1.530419 GGCACCACACCACCATCAA 60.530 57.895 0.00 0.00 0.00 2.57
1008 4559 1.526575 GGCACCACACCACCATCAAG 61.527 60.000 0.00 0.00 0.00 3.02
1053 4607 2.159254 GCACAAGTCCACAACACACAAT 60.159 45.455 0.00 0.00 0.00 2.71
1054 4608 3.675775 GCACAAGTCCACAACACACAATT 60.676 43.478 0.00 0.00 0.00 2.32
1055 4609 4.439426 GCACAAGTCCACAACACACAATTA 60.439 41.667 0.00 0.00 0.00 1.40
1056 4610 5.645624 CACAAGTCCACAACACACAATTAA 58.354 37.500 0.00 0.00 0.00 1.40
1064 4618 5.635280 CCACAACACACAATTAACACAACAA 59.365 36.000 0.00 0.00 0.00 2.83
1066 4620 7.226084 CACAACACACAATTAACACAACAAAG 58.774 34.615 0.00 0.00 0.00 2.77
1080 4641 5.046663 ACACAACAAAGAACAAACCCATCTT 60.047 36.000 0.00 0.00 35.00 2.40
1101 4662 2.680312 TCCATCCTTCGAAGCAAGAG 57.320 50.000 19.99 5.85 0.00 2.85
1104 4665 3.198635 TCCATCCTTCGAAGCAAGAGAAT 59.801 43.478 19.99 1.46 0.00 2.40
1111 4677 2.094494 TCGAAGCAAGAGAATTCGAGCT 60.094 45.455 5.25 9.96 46.96 4.09
1115 4681 1.520590 GCAAGAGAATTCGAGCTAGCG 59.479 52.381 9.55 0.00 0.00 4.26
1360 4926 4.487412 CGTGTACCCGCCGGAGAC 62.487 72.222 5.05 1.98 0.00 3.36
1425 4995 2.038813 TCCGCATCTGGGAGGTGA 59.961 61.111 0.00 0.00 0.00 4.02
1460 5045 7.807198 TGACTAATCCTCTAGCTCTCTTCTTA 58.193 38.462 0.00 0.00 0.00 2.10
1834 5441 4.514577 CCGTTCGCCGAGCAGGAT 62.515 66.667 1.08 0.00 45.00 3.24
2003 5621 4.002982 CCTTGTCATCGATTTCCTCACAA 58.997 43.478 0.00 0.00 0.00 3.33
2010 5644 7.552330 TGTCATCGATTTCCTCACAAATGATTA 59.448 33.333 0.00 0.00 33.22 1.75
2305 5956 4.742201 CTGGGTCGTCGCCAGTGG 62.742 72.222 4.20 4.20 31.76 4.00
2323 5974 3.547513 CGTAGCTAGGGGGTGGCC 61.548 72.222 5.50 0.00 31.44 5.36
2324 5975 2.366435 GTAGCTAGGGGGTGGCCA 60.366 66.667 0.00 0.00 31.44 5.36
2325 5976 2.040884 TAGCTAGGGGGTGGCCAG 60.041 66.667 5.11 0.00 31.44 4.85
2326 5977 3.714078 TAGCTAGGGGGTGGCCAGG 62.714 68.421 5.11 0.00 31.44 4.45
2328 5979 2.039405 CTAGGGGGTGGCCAGGAT 60.039 66.667 5.11 0.00 0.00 3.24
2329 5980 2.368192 TAGGGGGTGGCCAGGATG 60.368 66.667 5.11 0.00 0.00 3.51
2352 6003 2.236489 CATGGACCACCCTGGAATTT 57.764 50.000 0.00 0.00 40.96 1.82
2353 6004 2.102578 CATGGACCACCCTGGAATTTC 58.897 52.381 0.00 0.00 40.96 2.17
2354 6005 0.407918 TGGACCACCCTGGAATTTCC 59.592 55.000 8.59 8.59 40.96 3.13
2355 6006 0.324368 GGACCACCCTGGAATTTCCC 60.324 60.000 12.90 0.00 40.96 3.97
2356 6007 0.324368 GACCACCCTGGAATTTCCCC 60.324 60.000 12.90 0.00 40.96 4.81
2357 6008 1.077298 ACCACCCTGGAATTTCCCCA 61.077 55.000 12.90 0.00 40.96 4.96
2358 6009 0.339510 CCACCCTGGAATTTCCCCAT 59.660 55.000 12.90 0.00 40.96 4.00
2359 6010 1.573376 CCACCCTGGAATTTCCCCATA 59.427 52.381 12.90 0.00 40.96 2.74
2360 6011 2.424812 CCACCCTGGAATTTCCCCATAG 60.425 54.545 12.90 3.52 40.96 2.23
2361 6012 1.217942 ACCCTGGAATTTCCCCATAGC 59.782 52.381 12.90 0.00 35.03 2.97
2362 6013 1.500736 CCCTGGAATTTCCCCATAGCT 59.499 52.381 12.90 0.00 35.03 3.32
2363 6014 2.091111 CCCTGGAATTTCCCCATAGCTT 60.091 50.000 12.90 0.00 35.03 3.74
2364 6015 2.961062 CCTGGAATTTCCCCATAGCTTG 59.039 50.000 12.90 0.00 35.03 4.01
2365 6016 3.628257 CCTGGAATTTCCCCATAGCTTGT 60.628 47.826 12.90 0.00 35.03 3.16
2366 6017 4.386312 CCTGGAATTTCCCCATAGCTTGTA 60.386 45.833 12.90 0.00 35.03 2.41
2367 6018 5.388654 CTGGAATTTCCCCATAGCTTGTAT 58.611 41.667 12.90 0.00 35.03 2.29
2368 6019 6.467194 CCTGGAATTTCCCCATAGCTTGTATA 60.467 42.308 12.90 0.00 35.03 1.47
2369 6020 7.102518 TGGAATTTCCCCATAGCTTGTATAT 57.897 36.000 12.90 0.00 35.03 0.86
2370 6021 8.225863 TGGAATTTCCCCATAGCTTGTATATA 57.774 34.615 12.90 0.00 35.03 0.86
2371 6022 8.674173 TGGAATTTCCCCATAGCTTGTATATAA 58.326 33.333 12.90 0.00 35.03 0.98
2372 6023 9.700831 GGAATTTCCCCATAGCTTGTATATAAT 57.299 33.333 3.89 0.00 0.00 1.28
2377 6028 8.911018 TCCCCATAGCTTGTATATAATGTAGT 57.089 34.615 0.00 0.00 0.00 2.73
2437 6088 9.349713 TGTAAATATTTCTATTGATGGACCACC 57.650 33.333 3.39 0.00 0.00 4.61
2438 6089 7.839680 AAATATTTCTATTGATGGACCACCC 57.160 36.000 0.00 0.00 34.81 4.61
2439 6090 6.786843 ATATTTCTATTGATGGACCACCCT 57.213 37.500 0.00 0.00 35.38 4.34
2440 6091 3.931907 TTCTATTGATGGACCACCCTG 57.068 47.619 0.00 0.00 35.38 4.45
2441 6092 3.129262 TCTATTGATGGACCACCCTGA 57.871 47.619 0.00 0.00 35.38 3.86
2442 6093 3.668821 TCTATTGATGGACCACCCTGAT 58.331 45.455 0.00 0.00 35.38 2.90
2443 6094 4.047166 TCTATTGATGGACCACCCTGATT 58.953 43.478 0.00 0.00 35.38 2.57
2444 6095 3.763557 ATTGATGGACCACCCTGATTT 57.236 42.857 0.00 0.00 35.38 2.17
2445 6096 4.879295 ATTGATGGACCACCCTGATTTA 57.121 40.909 0.00 0.00 35.38 1.40
2446 6097 4.879295 TTGATGGACCACCCTGATTTAT 57.121 40.909 0.00 0.00 35.38 1.40
2447 6098 4.879295 TGATGGACCACCCTGATTTATT 57.121 40.909 0.00 0.00 35.38 1.40
2448 6099 4.535781 TGATGGACCACCCTGATTTATTG 58.464 43.478 0.00 0.00 35.38 1.90
2449 6100 3.380471 TGGACCACCCTGATTTATTGG 57.620 47.619 0.00 0.00 35.38 3.16
2450 6101 2.024464 TGGACCACCCTGATTTATTGGG 60.024 50.000 0.00 0.00 46.07 4.12
2451 6102 2.031870 GACCACCCTGATTTATTGGGC 58.968 52.381 0.00 0.00 44.56 5.36
2452 6103 1.645919 ACCACCCTGATTTATTGGGCT 59.354 47.619 0.00 0.00 44.56 5.19
2453 6104 2.034124 CCACCCTGATTTATTGGGCTG 58.966 52.381 0.00 0.00 44.56 4.85
2454 6105 2.034124 CACCCTGATTTATTGGGCTGG 58.966 52.381 0.00 0.00 44.56 4.85
2455 6106 1.043022 CCCTGATTTATTGGGCTGGC 58.957 55.000 0.00 0.00 33.88 4.85
2456 6107 1.412074 CCCTGATTTATTGGGCTGGCT 60.412 52.381 0.00 0.00 33.88 4.75
2457 6108 2.158475 CCCTGATTTATTGGGCTGGCTA 60.158 50.000 0.00 0.00 33.88 3.93
2458 6109 2.887152 CCTGATTTATTGGGCTGGCTAC 59.113 50.000 0.00 0.00 0.00 3.58
2459 6110 2.549754 CTGATTTATTGGGCTGGCTACG 59.450 50.000 0.00 0.00 0.00 3.51
2460 6111 1.266989 GATTTATTGGGCTGGCTACGC 59.733 52.381 0.00 0.00 0.00 4.42
2471 6122 2.506438 GCTACGCCACTGGTCGTC 60.506 66.667 17.31 4.97 36.94 4.20
2472 6123 2.202440 CTACGCCACTGGTCGTCG 60.202 66.667 17.31 10.20 36.94 5.12
2473 6124 4.409218 TACGCCACTGGTCGTCGC 62.409 66.667 17.31 0.00 36.94 5.19
2495 6149 6.423905 TCGCAGGATGATTAATTAAGTGCTAC 59.576 38.462 3.94 0.00 39.69 3.58
2500 6154 8.934697 AGGATGATTAATTAAGTGCTACCAGTA 58.065 33.333 3.94 0.00 0.00 2.74
2501 6155 9.209175 GGATGATTAATTAAGTGCTACCAGTAG 57.791 37.037 3.94 0.23 36.29 2.57
2504 6158 4.772886 AATTAAGTGCTACCAGTAGGGG 57.227 45.455 6.94 0.00 42.91 4.79
2505 6159 3.478175 TTAAGTGCTACCAGTAGGGGA 57.522 47.619 6.94 0.00 42.91 4.81
2506 6160 2.570386 AAGTGCTACCAGTAGGGGAT 57.430 50.000 6.94 0.00 42.91 3.85
2507 6161 2.570386 AGTGCTACCAGTAGGGGATT 57.430 50.000 6.94 0.00 42.91 3.01
2508 6162 2.846950 AGTGCTACCAGTAGGGGATTT 58.153 47.619 6.94 0.00 42.91 2.17
2509 6163 2.772515 AGTGCTACCAGTAGGGGATTTC 59.227 50.000 6.94 0.00 42.91 2.17
2519 6180 3.453353 AGTAGGGGATTTCGGATTTTCGA 59.547 43.478 0.00 0.00 37.38 3.71
2521 6182 3.214328 AGGGGATTTCGGATTTTCGATG 58.786 45.455 0.00 0.00 39.03 3.84
2523 6184 3.630312 GGGGATTTCGGATTTTCGATGAA 59.370 43.478 0.00 0.00 39.03 2.57
2534 6199 7.648112 TCGGATTTTCGATGAAGAACTATACTG 59.352 37.037 0.00 0.00 33.92 2.74
2536 6201 8.543774 GGATTTTCGATGAAGAACTATACTGTG 58.456 37.037 0.00 0.00 0.00 3.66
2537 6202 9.088512 GATTTTCGATGAAGAACTATACTGTGT 57.911 33.333 0.00 0.00 0.00 3.72
2563 6229 6.429791 AGTATCGAAGTATGATCAGGATCG 57.570 41.667 13.59 13.59 40.63 3.69
2564 6230 6.174049 AGTATCGAAGTATGATCAGGATCGA 58.826 40.000 20.56 20.56 40.63 3.59
2565 6231 6.826231 AGTATCGAAGTATGATCAGGATCGAT 59.174 38.462 26.91 26.91 46.49 3.59
2566 6232 5.553290 TCGAAGTATGATCAGGATCGATC 57.447 43.478 17.36 17.36 41.88 3.69
2567 6233 5.249420 TCGAAGTATGATCAGGATCGATCT 58.751 41.667 23.96 4.92 42.01 2.75
2568 6234 6.407202 TCGAAGTATGATCAGGATCGATCTA 58.593 40.000 23.96 11.11 42.01 1.98
2569 6235 6.879458 TCGAAGTATGATCAGGATCGATCTAA 59.121 38.462 23.96 10.77 42.01 2.10
2570 6236 6.964370 CGAAGTATGATCAGGATCGATCTAAC 59.036 42.308 23.96 8.59 42.01 2.34
2571 6237 6.429791 AGTATGATCAGGATCGATCTAACG 57.570 41.667 23.96 10.68 42.01 3.18
2572 6238 5.941058 AGTATGATCAGGATCGATCTAACGT 59.059 40.000 23.96 14.20 42.01 3.99
2573 6239 5.713792 ATGATCAGGATCGATCTAACGTT 57.286 39.130 23.96 5.88 42.01 3.99
2574 6240 5.515797 TGATCAGGATCGATCTAACGTTT 57.484 39.130 23.96 4.23 42.01 3.60
2575 6241 5.902681 TGATCAGGATCGATCTAACGTTTT 58.097 37.500 23.96 2.72 42.01 2.43
2576 6242 6.338146 TGATCAGGATCGATCTAACGTTTTT 58.662 36.000 23.96 1.34 42.01 1.94
2625 6292 5.601313 TGGTATTGTAGGTCAATCTAGTCCC 59.399 44.000 0.00 0.00 44.50 4.46
2644 6311 5.032220 GTCCCGTGTTTCTTGTTTTAGTTG 58.968 41.667 0.00 0.00 0.00 3.16
2688 6365 7.169308 GTGTACACCATGTATAGATGTACTTGC 59.831 40.741 15.42 0.16 43.83 4.01
2694 6371 6.582672 CCATGTATAGATGTACTTGCTACGTG 59.417 42.308 8.88 2.25 31.78 4.49
2703 6380 1.724623 ACTTGCTACGTGCGTGTATTG 59.275 47.619 7.55 0.00 46.63 1.90
2704 6381 0.440758 TTGCTACGTGCGTGTATTGC 59.559 50.000 7.55 4.90 46.63 3.56
2705 6382 0.389296 TGCTACGTGCGTGTATTGCT 60.389 50.000 7.55 0.00 46.63 3.91
2706 6383 0.025001 GCTACGTGCGTGTATTGCTG 59.975 55.000 7.55 0.00 0.00 4.41
2708 6385 1.989864 CTACGTGCGTGTATTGCTGAA 59.010 47.619 7.55 0.00 0.00 3.02
2709 6386 1.222300 ACGTGCGTGTATTGCTGAAA 58.778 45.000 0.00 0.00 0.00 2.69
2711 6388 1.070242 CGTGCGTGTATTGCTGAAACA 60.070 47.619 0.00 0.00 0.00 2.83
2713 6390 3.564511 GTGCGTGTATTGCTGAAACATT 58.435 40.909 0.00 0.00 0.00 2.71
2714 6391 3.980775 GTGCGTGTATTGCTGAAACATTT 59.019 39.130 0.00 0.00 0.00 2.32
2715 6392 4.444056 GTGCGTGTATTGCTGAAACATTTT 59.556 37.500 0.00 0.00 0.00 1.82
2716 6393 4.443725 TGCGTGTATTGCTGAAACATTTTG 59.556 37.500 0.00 0.00 0.00 2.44
2717 6394 4.663889 GCGTGTATTGCTGAAACATTTTGC 60.664 41.667 0.00 0.00 0.00 3.68
2718 6395 4.443725 CGTGTATTGCTGAAACATTTTGCA 59.556 37.500 0.00 0.00 0.00 4.08
2719 6396 5.118971 CGTGTATTGCTGAAACATTTTGCAT 59.881 36.000 0.00 2.52 32.84 3.96
2720 6397 6.301108 GTGTATTGCTGAAACATTTTGCATG 58.699 36.000 0.00 0.00 32.84 4.06
2721 6398 5.990386 TGTATTGCTGAAACATTTTGCATGT 59.010 32.000 0.00 0.00 32.84 3.21
2722 6399 4.797693 TTGCTGAAACATTTTGCATGTG 57.202 36.364 0.00 0.00 32.84 3.21
2723 6400 2.544686 TGCTGAAACATTTTGCATGTGC 59.455 40.909 0.00 0.00 42.50 4.57
2724 6401 2.803956 GCTGAAACATTTTGCATGTGCT 59.196 40.909 6.55 0.00 42.66 4.40
2725 6402 3.989167 GCTGAAACATTTTGCATGTGCTA 59.011 39.130 6.55 0.00 42.66 3.49
2726 6403 4.628333 GCTGAAACATTTTGCATGTGCTAT 59.372 37.500 6.55 0.00 42.66 2.97
2727 6404 5.806502 GCTGAAACATTTTGCATGTGCTATA 59.193 36.000 6.55 0.00 42.66 1.31
2728 6405 6.310956 GCTGAAACATTTTGCATGTGCTATAA 59.689 34.615 6.55 0.00 42.66 0.98
2729 6406 7.010738 GCTGAAACATTTTGCATGTGCTATAAT 59.989 33.333 6.55 1.18 42.66 1.28
2730 6407 9.518906 CTGAAACATTTTGCATGTGCTATAATA 57.481 29.630 6.55 0.00 42.66 0.98
2731 6408 9.866798 TGAAACATTTTGCATGTGCTATAATAA 57.133 25.926 6.55 0.00 42.66 1.40
2776 6456 7.878477 ATTATTTGTGCATGTTCTTGTGAAG 57.122 32.000 0.00 0.00 32.15 3.02
2814 6498 2.177580 CGTGTTTGTGTGAGGCCGT 61.178 57.895 0.00 0.00 0.00 5.68
2815 6499 0.876777 CGTGTTTGTGTGAGGCCGTA 60.877 55.000 0.00 0.00 0.00 4.02
2816 6500 1.519408 GTGTTTGTGTGAGGCCGTAT 58.481 50.000 0.00 0.00 0.00 3.06
2817 6501 1.877443 GTGTTTGTGTGAGGCCGTATT 59.123 47.619 0.00 0.00 0.00 1.89
2818 6502 1.876799 TGTTTGTGTGAGGCCGTATTG 59.123 47.619 0.00 0.00 0.00 1.90
2820 6504 0.250510 TTGTGTGAGGCCGTATTGCA 60.251 50.000 0.00 0.00 0.00 4.08
2821 6505 0.250510 TGTGTGAGGCCGTATTGCAA 60.251 50.000 0.00 0.00 0.00 4.08
2822 6506 0.878416 GTGTGAGGCCGTATTGCAAA 59.122 50.000 1.71 0.00 0.00 3.68
2823 6507 1.472480 GTGTGAGGCCGTATTGCAAAT 59.528 47.619 1.71 0.00 0.00 2.32
2827 6511 2.353269 TGAGGCCGTATTGCAAATTACG 59.647 45.455 20.52 20.52 40.56 3.18
2848 6532 0.174845 TCGTATGAGTTCTTGCGGGG 59.825 55.000 5.87 0.00 31.95 5.73
2849 6533 1.429148 CGTATGAGTTCTTGCGGGGC 61.429 60.000 0.00 0.00 0.00 5.80
2885 6623 6.949352 ATTAGCATCGACAAAAATGGATCT 57.051 33.333 0.00 0.00 0.00 2.75
2892 7081 6.241207 TCGACAAAAATGGATCTTGTCTTC 57.759 37.500 17.63 0.00 44.34 2.87
2918 7107 2.809601 GCGCGTGTCCTCATCGTT 60.810 61.111 8.43 0.00 0.00 3.85
2940 7130 1.136984 GACGGACTGGTCGTAGCTG 59.863 63.158 0.00 0.00 41.22 4.24
2942 7132 2.184579 GGACTGGTCGTAGCTGGC 59.815 66.667 0.00 0.00 0.00 4.85
2971 7161 4.357279 GGCTGTGCCTTGCTCCCT 62.357 66.667 0.73 0.00 46.69 4.20
2972 7162 2.282745 GCTGTGCCTTGCTCCCTT 60.283 61.111 0.00 0.00 0.00 3.95
2973 7163 2.633509 GCTGTGCCTTGCTCCCTTG 61.634 63.158 0.00 0.00 0.00 3.61
2974 7164 1.228367 CTGTGCCTTGCTCCCTTGT 60.228 57.895 0.00 0.00 0.00 3.16
2975 7165 1.228245 TGTGCCTTGCTCCCTTGTC 60.228 57.895 0.00 0.00 0.00 3.18
2976 7166 1.973812 GTGCCTTGCTCCCTTGTCC 60.974 63.158 0.00 0.00 0.00 4.02
2977 7167 2.156098 TGCCTTGCTCCCTTGTCCT 61.156 57.895 0.00 0.00 0.00 3.85
3023 7213 3.788766 CGGACGGCGCTTTCCAAG 61.789 66.667 22.42 8.04 0.00 3.61
3027 7219 2.978010 CGGCGCTTTCCAAGTGGT 60.978 61.111 7.64 0.00 39.38 4.16
3057 7249 3.164028 GCGAGCATTAATTTCGGCC 57.836 52.632 16.56 0.00 35.05 6.13
3064 7268 1.531149 CATTAATTTCGGCCTCGCGAT 59.469 47.619 10.36 0.00 36.13 4.58
3080 7284 0.026285 CGATCGGCGTGTCAAAATCC 59.974 55.000 7.38 0.00 34.64 3.01
3082 7286 1.327764 GATCGGCGTGTCAAAATCCTC 59.672 52.381 6.85 0.00 0.00 3.71
3083 7287 0.320374 TCGGCGTGTCAAAATCCTCT 59.680 50.000 6.85 0.00 0.00 3.69
3085 7289 1.808411 GGCGTGTCAAAATCCTCTCA 58.192 50.000 0.00 0.00 0.00 3.27
3087 7291 1.129437 GCGTGTCAAAATCCTCTCAGC 59.871 52.381 0.00 0.00 0.00 4.26
3107 7311 4.799473 CGCGCGTTCTCGTCCGTA 62.799 66.667 24.19 0.00 39.49 4.02
3108 7312 2.277756 GCGCGTTCTCGTCCGTAT 60.278 61.111 8.43 0.00 39.49 3.06
3205 7596 1.002033 AGGTATATCGCCGACGTTGAC 60.002 52.381 3.74 0.00 41.18 3.18
3211 7602 2.970324 GCCGACGTTGACCAGCAA 60.970 61.111 3.74 0.00 0.00 3.91
3225 7616 5.782047 TGACCAGCAACTTATCCAAAAATG 58.218 37.500 0.00 0.00 0.00 2.32
3226 7617 5.151297 ACCAGCAACTTATCCAAAAATGG 57.849 39.130 0.00 0.00 0.00 3.16
3250 7641 1.002033 AGTGACACCGACGACAGTTAC 60.002 52.381 0.84 0.00 0.00 2.50
3251 7642 1.002033 GTGACACCGACGACAGTTACT 60.002 52.381 0.00 0.00 0.00 2.24
3252 7643 2.224079 GTGACACCGACGACAGTTACTA 59.776 50.000 0.00 0.00 0.00 1.82
3253 7644 3.076621 TGACACCGACGACAGTTACTAT 58.923 45.455 0.00 0.00 0.00 2.12
3254 7645 4.093408 GTGACACCGACGACAGTTACTATA 59.907 45.833 0.00 0.00 0.00 1.31
3255 7646 4.093408 TGACACCGACGACAGTTACTATAC 59.907 45.833 0.00 0.00 0.00 1.47
3256 7647 3.062639 ACACCGACGACAGTTACTATACG 59.937 47.826 0.00 0.00 0.00 3.06
3257 7648 3.062639 CACCGACGACAGTTACTATACGT 59.937 47.826 9.45 9.45 36.71 3.57
3258 7649 3.684788 ACCGACGACAGTTACTATACGTT 59.315 43.478 0.00 0.00 34.26 3.99
3259 7650 4.201724 ACCGACGACAGTTACTATACGTTC 60.202 45.833 0.00 5.48 34.26 3.95
3260 7651 4.201714 CCGACGACAGTTACTATACGTTCA 60.202 45.833 0.00 0.00 34.26 3.18
3261 7652 5.315982 CGACGACAGTTACTATACGTTCAA 58.684 41.667 0.00 0.00 34.26 2.69
3262 7653 5.790003 CGACGACAGTTACTATACGTTCAAA 59.210 40.000 0.00 0.00 34.26 2.69
3263 7654 6.022717 CGACGACAGTTACTATACGTTCAAAG 60.023 42.308 0.00 0.00 34.26 2.77
3264 7655 5.570589 ACGACAGTTACTATACGTTCAAAGC 59.429 40.000 0.00 0.00 0.00 3.51
3265 7656 5.275142 CGACAGTTACTATACGTTCAAAGCG 60.275 44.000 0.00 0.00 0.00 4.68
3266 7657 5.464168 ACAGTTACTATACGTTCAAAGCGT 58.536 37.500 0.00 0.00 45.11 5.07
3267 7658 5.922544 ACAGTTACTATACGTTCAAAGCGTT 59.077 36.000 0.00 0.00 42.85 4.84
3268 7659 6.088616 ACAGTTACTATACGTTCAAAGCGTTC 59.911 38.462 0.00 0.00 42.85 3.95
3269 7660 5.284660 AGTTACTATACGTTCAAAGCGTTCG 59.715 40.000 0.00 0.00 42.85 3.95
3270 7661 3.825308 ACTATACGTTCAAAGCGTTCGA 58.175 40.909 0.00 0.00 42.85 3.71
3271 7662 4.418392 ACTATACGTTCAAAGCGTTCGAT 58.582 39.130 0.00 0.00 42.85 3.59
3272 7663 4.860907 ACTATACGTTCAAAGCGTTCGATT 59.139 37.500 0.00 0.00 42.85 3.34
3273 7664 4.657075 ATACGTTCAAAGCGTTCGATTT 57.343 36.364 0.00 2.65 42.85 2.17
3274 7665 3.328237 ACGTTCAAAGCGTTCGATTTT 57.672 38.095 5.72 0.00 39.79 1.82
3275 7666 4.455917 ACGTTCAAAGCGTTCGATTTTA 57.544 36.364 5.72 0.00 39.79 1.52
3276 7667 5.025986 ACGTTCAAAGCGTTCGATTTTAT 57.974 34.783 5.72 0.00 39.79 1.40
3277 7668 4.843984 ACGTTCAAAGCGTTCGATTTTATG 59.156 37.500 5.72 5.83 39.79 1.90
3278 7669 4.259734 CGTTCAAAGCGTTCGATTTTATGG 59.740 41.667 5.72 0.00 0.00 2.74
3279 7670 5.387279 GTTCAAAGCGTTCGATTTTATGGA 58.613 37.500 5.72 0.00 0.00 3.41
3280 7671 4.965062 TCAAAGCGTTCGATTTTATGGAC 58.035 39.130 5.72 0.00 0.00 4.02
3281 7672 4.452795 TCAAAGCGTTCGATTTTATGGACA 59.547 37.500 5.72 0.00 0.00 4.02
3282 7673 4.336532 AAGCGTTCGATTTTATGGACAC 57.663 40.909 0.00 0.00 0.00 3.67
3283 7674 3.596214 AGCGTTCGATTTTATGGACACT 58.404 40.909 0.00 0.00 0.00 3.55
3284 7675 3.617263 AGCGTTCGATTTTATGGACACTC 59.383 43.478 0.00 0.00 0.00 3.51
3285 7676 3.541516 GCGTTCGATTTTATGGACACTCG 60.542 47.826 0.00 0.00 0.00 4.18
3286 7677 3.000078 CGTTCGATTTTATGGACACTCGG 60.000 47.826 0.00 0.00 0.00 4.63
3287 7678 2.546778 TCGATTTTATGGACACTCGGC 58.453 47.619 0.00 0.00 0.00 5.54
3288 7679 1.597663 CGATTTTATGGACACTCGGCC 59.402 52.381 0.00 0.00 0.00 6.13
3289 7680 1.597663 GATTTTATGGACACTCGGCCG 59.402 52.381 22.12 22.12 0.00 6.13
3290 7681 0.391927 TTTTATGGACACTCGGCCGG 60.392 55.000 27.83 18.67 0.00 6.13
3291 7682 1.546589 TTTATGGACACTCGGCCGGT 61.547 55.000 27.83 19.40 0.00 5.28
3292 7683 1.546589 TTATGGACACTCGGCCGGTT 61.547 55.000 27.83 9.82 0.00 4.44
3293 7684 1.546589 TATGGACACTCGGCCGGTTT 61.547 55.000 27.83 15.18 0.00 3.27
3294 7685 2.741211 GGACACTCGGCCGGTTTC 60.741 66.667 27.83 22.20 0.00 2.78
3295 7686 2.029964 GACACTCGGCCGGTTTCA 59.970 61.111 27.83 3.84 0.00 2.69
3296 7687 1.375523 GACACTCGGCCGGTTTCAT 60.376 57.895 27.83 6.25 0.00 2.57
3297 7688 1.359459 GACACTCGGCCGGTTTCATC 61.359 60.000 27.83 12.05 0.00 2.92
3298 7689 2.125673 ACTCGGCCGGTTTCATCG 60.126 61.111 27.83 6.21 0.00 3.84
3299 7690 2.183300 CTCGGCCGGTTTCATCGA 59.817 61.111 27.83 0.26 0.00 3.59
3300 7691 1.227263 CTCGGCCGGTTTCATCGAT 60.227 57.895 27.83 0.00 0.00 3.59
3301 7692 1.215655 CTCGGCCGGTTTCATCGATC 61.216 60.000 27.83 0.00 0.00 3.69
3302 7693 2.585869 CGGCCGGTTTCATCGATCG 61.586 63.158 20.10 9.36 0.00 3.69
3303 7694 2.626455 GCCGGTTTCATCGATCGC 59.374 61.111 11.09 0.00 0.00 4.58
3304 7695 2.171079 GCCGGTTTCATCGATCGCA 61.171 57.895 11.09 0.00 0.00 5.10
3305 7696 1.636340 CCGGTTTCATCGATCGCAC 59.364 57.895 11.09 1.65 0.00 5.34
3306 7697 1.269810 CGGTTTCATCGATCGCACG 59.730 57.895 11.09 0.74 0.00 5.34
3307 7698 1.636340 GGTTTCATCGATCGCACGG 59.364 57.895 11.09 0.00 0.00 4.94
3308 7699 0.804544 GGTTTCATCGATCGCACGGA 60.805 55.000 11.09 1.95 0.00 4.69
3309 7700 0.996462 GTTTCATCGATCGCACGGAA 59.004 50.000 11.09 8.22 0.00 4.30
3310 7701 0.996462 TTTCATCGATCGCACGGAAC 59.004 50.000 11.09 0.00 0.00 3.62
3325 7716 2.580966 GGAACGGGTCATCTGTAGAC 57.419 55.000 0.00 0.00 33.89 2.59
3326 7717 1.822990 GGAACGGGTCATCTGTAGACA 59.177 52.381 0.00 0.00 37.74 3.41
3327 7718 2.431057 GGAACGGGTCATCTGTAGACAT 59.569 50.000 0.00 0.00 37.74 3.06
3328 7719 3.118738 GGAACGGGTCATCTGTAGACATT 60.119 47.826 0.00 0.00 37.74 2.71
3329 7720 3.802948 ACGGGTCATCTGTAGACATTC 57.197 47.619 0.00 0.00 37.74 2.67
3330 7721 2.099263 ACGGGTCATCTGTAGACATTCG 59.901 50.000 0.00 0.00 37.74 3.34
3331 7722 2.543861 CGGGTCATCTGTAGACATTCGG 60.544 54.545 0.00 0.00 37.74 4.30
3332 7723 2.474816 GGTCATCTGTAGACATTCGGC 58.525 52.381 0.00 0.00 37.74 5.54
3333 7724 2.474816 GTCATCTGTAGACATTCGGCC 58.525 52.381 0.00 0.00 36.06 6.13
3334 7725 1.067060 TCATCTGTAGACATTCGGCCG 59.933 52.381 22.12 22.12 0.00 6.13
3335 7726 0.389391 ATCTGTAGACATTCGGCCGG 59.611 55.000 27.83 12.37 0.00 6.13
3336 7727 0.968901 TCTGTAGACATTCGGCCGGT 60.969 55.000 27.83 16.15 0.00 5.28
3337 7728 0.108329 CTGTAGACATTCGGCCGGTT 60.108 55.000 27.83 10.48 0.00 4.44
3338 7729 1.135527 CTGTAGACATTCGGCCGGTTA 59.864 52.381 27.83 11.88 0.00 2.85
3339 7730 1.135024 TGTAGACATTCGGCCGGTTAC 60.135 52.381 27.83 18.07 0.00 2.50
3340 7731 1.135721 GTAGACATTCGGCCGGTTACT 59.864 52.381 27.83 19.46 0.00 2.24
3341 7732 1.477553 AGACATTCGGCCGGTTACTA 58.522 50.000 27.83 0.17 0.00 1.82
3342 7733 1.135721 AGACATTCGGCCGGTTACTAC 59.864 52.381 27.83 11.10 0.00 2.73
3343 7734 0.896923 ACATTCGGCCGGTTACTACA 59.103 50.000 27.83 0.00 0.00 2.74
3344 7735 1.134907 ACATTCGGCCGGTTACTACAG 60.135 52.381 27.83 7.68 0.00 2.74
3345 7736 0.179092 ATTCGGCCGGTTACTACAGC 60.179 55.000 27.83 0.00 0.00 4.40
3346 7737 1.252904 TTCGGCCGGTTACTACAGCT 61.253 55.000 27.83 0.00 0.00 4.24
3347 7738 0.394216 TCGGCCGGTTACTACAGCTA 60.394 55.000 27.83 0.00 0.00 3.32
3348 7739 0.030369 CGGCCGGTTACTACAGCTAG 59.970 60.000 20.10 0.00 0.00 3.42
3349 7740 1.109609 GGCCGGTTACTACAGCTAGT 58.890 55.000 1.90 0.00 37.04 2.57
3350 7741 1.066757 GGCCGGTTACTACAGCTAGTC 59.933 57.143 1.90 0.00 34.79 2.59
3351 7742 1.066757 GCCGGTTACTACAGCTAGTCC 59.933 57.143 1.90 0.00 34.79 3.85
3352 7743 2.652590 CCGGTTACTACAGCTAGTCCT 58.347 52.381 0.00 0.00 34.79 3.85
3353 7744 2.358267 CCGGTTACTACAGCTAGTCCTG 59.642 54.545 0.00 0.00 34.79 3.86
3354 7745 2.223525 CGGTTACTACAGCTAGTCCTGC 60.224 54.545 0.00 0.00 36.29 4.85
3355 7746 2.758979 GGTTACTACAGCTAGTCCTGCA 59.241 50.000 0.00 0.00 36.29 4.41
3356 7747 3.181485 GGTTACTACAGCTAGTCCTGCAG 60.181 52.174 6.78 6.78 36.29 4.41
3357 7748 0.820871 ACTACAGCTAGTCCTGCAGC 59.179 55.000 8.66 0.00 36.29 5.25
3358 7749 0.103937 CTACAGCTAGTCCTGCAGCC 59.896 60.000 8.66 0.14 38.61 4.85
3359 7750 0.324738 TACAGCTAGTCCTGCAGCCT 60.325 55.000 8.66 8.79 38.61 4.58
3360 7751 1.197430 ACAGCTAGTCCTGCAGCCTT 61.197 55.000 8.66 0.00 38.61 4.35
3361 7752 0.743701 CAGCTAGTCCTGCAGCCTTG 60.744 60.000 8.66 8.32 38.61 3.61
3362 7753 0.906756 AGCTAGTCCTGCAGCCTTGA 60.907 55.000 8.66 0.00 38.61 3.02
3363 7754 0.742635 GCTAGTCCTGCAGCCTTGAC 60.743 60.000 8.66 10.45 0.00 3.18
3364 7755 0.610174 CTAGTCCTGCAGCCTTGACA 59.390 55.000 19.00 7.72 0.00 3.58
3365 7756 1.209019 CTAGTCCTGCAGCCTTGACAT 59.791 52.381 19.00 9.49 0.00 3.06
3366 7757 0.322277 AGTCCTGCAGCCTTGACATG 60.322 55.000 19.00 0.00 0.00 3.21
3367 7758 0.321919 GTCCTGCAGCCTTGACATGA 60.322 55.000 8.66 0.00 0.00 3.07
3368 7759 0.035725 TCCTGCAGCCTTGACATGAG 60.036 55.000 8.66 0.00 0.00 2.90
3369 7760 1.654954 CCTGCAGCCTTGACATGAGC 61.655 60.000 8.66 0.00 0.00 4.26
3370 7761 1.978712 CTGCAGCCTTGACATGAGCG 61.979 60.000 0.00 0.00 0.00 5.03
3371 7762 2.758089 GCAGCCTTGACATGAGCGG 61.758 63.158 0.00 0.00 0.00 5.52
3372 7763 2.110967 CAGCCTTGACATGAGCGGG 61.111 63.158 0.00 0.00 0.00 6.13
3373 7764 3.512516 GCCTTGACATGAGCGGGC 61.513 66.667 0.00 4.22 0.00 6.13
3374 7765 2.825836 CCTTGACATGAGCGGGCC 60.826 66.667 0.00 0.00 0.00 5.80
3375 7766 3.197790 CTTGACATGAGCGGGCCG 61.198 66.667 24.35 24.35 0.00 6.13
3376 7767 4.776322 TTGACATGAGCGGGCCGG 62.776 66.667 29.48 13.14 0.00 6.13
3400 7791 4.016629 CGACACACGGACGGACGA 62.017 66.667 8.01 0.00 38.46 4.20
3401 7792 2.428071 GACACACGGACGGACGAC 60.428 66.667 8.01 0.00 37.61 4.34
3412 7803 4.580044 GGACGACGCGCATGCATG 62.580 66.667 22.70 22.70 42.97 4.06
3413 7804 4.580044 GACGACGCGCATGCATGG 62.580 66.667 27.34 17.93 42.97 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
4 5 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
5 6 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
6 7 2.369532 GTTGGTTAGGTGGACAGTGGTA 59.630 50.000 0.00 0.00 0.00 3.25
7 8 1.142262 GTTGGTTAGGTGGACAGTGGT 59.858 52.381 0.00 0.00 0.00 4.16
8 9 1.420138 AGTTGGTTAGGTGGACAGTGG 59.580 52.381 0.00 0.00 0.00 4.00
9 10 2.104111 TGAGTTGGTTAGGTGGACAGTG 59.896 50.000 0.00 0.00 0.00 3.66
10 11 2.404559 TGAGTTGGTTAGGTGGACAGT 58.595 47.619 0.00 0.00 0.00 3.55
11 12 3.139077 GTTGAGTTGGTTAGGTGGACAG 58.861 50.000 0.00 0.00 0.00 3.51
14 15 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
15 16 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
16 17 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
17 18 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
18 19 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
20 21 2.422235 CCACCTGTGGTTGAGTTGGTTA 60.422 50.000 8.20 0.00 45.53 2.85
22 23 0.106719 CCACCTGTGGTTGAGTTGGT 60.107 55.000 8.20 0.00 45.53 3.67
23 24 2.719376 CCACCTGTGGTTGAGTTGG 58.281 57.895 8.20 0.00 45.53 3.77
59 60 0.531974 ACATGTCACGACGCAAAGGT 60.532 50.000 0.00 0.00 0.00 3.50
76 77 2.692024 TGTCCAGGGTAAAGTGGTACA 58.308 47.619 0.00 0.00 35.14 2.90
87 98 5.193728 ACATACCAGAAATATTGTCCAGGGT 59.806 40.000 0.00 0.00 0.00 4.34
102 113 9.856162 TGATACTACATACTTGTACATACCAGA 57.144 33.333 0.00 0.00 37.28 3.86
115 126 9.394767 TGCATTGTGAATTTGATACTACATACT 57.605 29.630 0.00 0.00 0.00 2.12
116 127 9.438291 GTGCATTGTGAATTTGATACTACATAC 57.562 33.333 0.00 0.00 0.00 2.39
117 128 9.171877 TGTGCATTGTGAATTTGATACTACATA 57.828 29.630 0.00 0.00 0.00 2.29
119 130 7.446001 TGTGCATTGTGAATTTGATACTACA 57.554 32.000 0.00 0.00 0.00 2.74
145 2596 6.720112 AACATAATGATGATGGAACTTGGG 57.280 37.500 0.00 0.00 36.48 4.12
182 2639 1.699656 GGCTAGTGCGCTGTGTCATG 61.700 60.000 10.80 0.00 40.82 3.07
192 2649 2.510238 GGACTGCTGGCTAGTGCG 60.510 66.667 0.00 0.00 40.82 5.34
246 2724 2.491308 CGACAGATCGCGCGATAAA 58.509 52.632 41.84 19.06 42.43 1.40
308 2786 1.148273 AACCTCTTGCGGTTCAGCA 59.852 52.632 0.00 0.00 43.63 4.41
361 2852 5.211174 TGCATCCATCATCACAACAAAAA 57.789 34.783 0.00 0.00 0.00 1.94
402 2904 2.286365 ATTTCTTTCCACGCCTTCCA 57.714 45.000 0.00 0.00 0.00 3.53
436 2945 6.152323 AGTCTAGCTACTTCAATTTACACGGA 59.848 38.462 0.00 0.00 0.00 4.69
438 2947 7.219154 CAGAGTCTAGCTACTTCAATTTACACG 59.781 40.741 0.00 0.00 0.00 4.49
439 2948 7.009723 GCAGAGTCTAGCTACTTCAATTTACAC 59.990 40.741 0.00 0.00 0.00 2.90
440 2949 7.036220 GCAGAGTCTAGCTACTTCAATTTACA 58.964 38.462 0.00 0.00 0.00 2.41
441 2950 6.477360 GGCAGAGTCTAGCTACTTCAATTTAC 59.523 42.308 12.36 0.00 0.00 2.01
442 2951 6.381420 AGGCAGAGTCTAGCTACTTCAATTTA 59.619 38.462 12.36 0.00 0.00 1.40
443 2952 5.188751 AGGCAGAGTCTAGCTACTTCAATTT 59.811 40.000 12.36 0.00 0.00 1.82
444 2953 4.714308 AGGCAGAGTCTAGCTACTTCAATT 59.286 41.667 12.36 0.00 0.00 2.32
445 2954 4.099266 CAGGCAGAGTCTAGCTACTTCAAT 59.901 45.833 12.36 0.00 0.00 2.57
477 2993 2.067013 GTCGGTTTTACAGAGACAGGC 58.933 52.381 0.00 0.00 32.57 4.85
499 3017 1.381872 TAGCAGGAGCCAGGAGGTC 60.382 63.158 0.00 0.00 43.56 3.85
521 3051 6.824305 AGTTTATTCAATCCAGTTCACCAG 57.176 37.500 0.00 0.00 0.00 4.00
710 3250 2.423538 CTCCCAAAATCACCGACCATTC 59.576 50.000 0.00 0.00 0.00 2.67
728 3268 2.354821 GTGATTTTGGGTGCGATACTCC 59.645 50.000 0.00 0.00 0.00 3.85
729 3269 3.270877 AGTGATTTTGGGTGCGATACTC 58.729 45.455 0.00 0.00 0.00 2.59
736 3285 2.492088 GGTAAGGAGTGATTTTGGGTGC 59.508 50.000 0.00 0.00 0.00 5.01
772 3490 6.382859 TCTCTTGCCTTATATGGTAACTGACA 59.617 38.462 4.35 0.00 37.61 3.58
797 3517 9.832445 AACCAAACATTATCTTGTCGTAGATAT 57.168 29.630 0.00 0.00 40.67 1.63
864 4358 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
865 4359 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
866 4360 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
867 4361 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
868 4362 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
869 4363 5.960811 TCTTTCTCTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
870 4364 6.097554 TCTCTTTCTCTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
871 4365 5.960811 TCTCTTTCTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
872 4366 6.097554 TCTCTCTTTCTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
873 4367 5.960811 TCTCTCTTTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
874 4368 6.097554 TCTCTCTCTTTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
875 4369 5.960811 TCTCTCTCTTTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
876 4370 6.045955 GTCTCTCTCTTTCTCTCTCTCTCTC 58.954 48.000 0.00 0.00 0.00 3.20
877 4371 5.104735 GGTCTCTCTCTTTCTCTCTCTCTCT 60.105 48.000 0.00 0.00 0.00 3.10
878 4372 5.104735 AGGTCTCTCTCTTTCTCTCTCTCTC 60.105 48.000 0.00 0.00 0.00 3.20
879 4373 4.785376 AGGTCTCTCTCTTTCTCTCTCTCT 59.215 45.833 0.00 0.00 0.00 3.10
880 4374 5.104259 AGGTCTCTCTCTTTCTCTCTCTC 57.896 47.826 0.00 0.00 0.00 3.20
881 4375 6.831664 ATAGGTCTCTCTCTTTCTCTCTCT 57.168 41.667 0.00 0.00 0.00 3.10
882 4376 6.651225 GCTATAGGTCTCTCTCTTTCTCTCTC 59.349 46.154 1.04 0.00 0.00 3.20
883 4377 6.330250 AGCTATAGGTCTCTCTCTTTCTCTCT 59.670 42.308 0.00 0.00 0.00 3.10
884 4378 6.534634 AGCTATAGGTCTCTCTCTTTCTCTC 58.465 44.000 0.00 0.00 0.00 3.20
885 4379 6.515512 AGCTATAGGTCTCTCTCTTTCTCT 57.484 41.667 0.00 0.00 0.00 3.10
886 4380 6.515035 GCAAGCTATAGGTCTCTCTCTTTCTC 60.515 46.154 4.63 0.00 0.00 2.87
887 4381 5.301805 GCAAGCTATAGGTCTCTCTCTTTCT 59.698 44.000 4.63 0.00 0.00 2.52
888 4382 5.301805 AGCAAGCTATAGGTCTCTCTCTTTC 59.698 44.000 4.63 0.00 0.00 2.62
889 4383 5.208121 AGCAAGCTATAGGTCTCTCTCTTT 58.792 41.667 4.63 0.00 0.00 2.52
890 4384 4.803452 AGCAAGCTATAGGTCTCTCTCTT 58.197 43.478 4.63 0.00 0.00 2.85
891 4385 4.453480 AGCAAGCTATAGGTCTCTCTCT 57.547 45.455 4.63 0.00 0.00 3.10
892 4386 4.700213 CCTAGCAAGCTATAGGTCTCTCTC 59.300 50.000 4.63 0.00 34.92 3.20
893 4387 4.352595 TCCTAGCAAGCTATAGGTCTCTCT 59.647 45.833 15.55 3.22 39.72 3.10
894 4388 4.658063 TCCTAGCAAGCTATAGGTCTCTC 58.342 47.826 15.55 0.00 39.72 3.20
895 4389 4.733077 TCCTAGCAAGCTATAGGTCTCT 57.267 45.455 15.55 7.85 39.72 3.10
896 4390 5.303333 ACTTTCCTAGCAAGCTATAGGTCTC 59.697 44.000 15.55 0.33 39.72 3.36
897 4391 5.212745 ACTTTCCTAGCAAGCTATAGGTCT 58.787 41.667 15.55 1.73 39.72 3.85
898 4392 5.538849 ACTTTCCTAGCAAGCTATAGGTC 57.461 43.478 15.55 0.00 39.72 3.85
899 4393 5.425539 TGAACTTTCCTAGCAAGCTATAGGT 59.574 40.000 15.55 0.00 39.72 3.08
900 4394 5.918608 TGAACTTTCCTAGCAAGCTATAGG 58.081 41.667 11.60 11.60 40.04 2.57
901 4395 7.441017 AGATGAACTTTCCTAGCAAGCTATAG 58.559 38.462 1.74 0.00 0.00 1.31
902 4396 7.069950 TGAGATGAACTTTCCTAGCAAGCTATA 59.930 37.037 1.74 0.00 0.00 1.31
903 4397 6.126940 TGAGATGAACTTTCCTAGCAAGCTAT 60.127 38.462 1.74 0.00 0.00 2.97
904 4398 5.187772 TGAGATGAACTTTCCTAGCAAGCTA 59.812 40.000 1.37 1.37 0.00 3.32
1002 4553 4.326278 GTGTTTGATGCTTGATGCTTGATG 59.674 41.667 0.00 0.00 43.37 3.07
1003 4554 4.021807 TGTGTTTGATGCTTGATGCTTGAT 60.022 37.500 0.00 0.00 43.37 2.57
1004 4555 3.318557 TGTGTTTGATGCTTGATGCTTGA 59.681 39.130 0.00 0.00 43.37 3.02
1005 4556 3.644823 TGTGTTTGATGCTTGATGCTTG 58.355 40.909 0.00 0.00 43.37 4.01
1006 4557 4.304110 CTTGTGTTTGATGCTTGATGCTT 58.696 39.130 0.00 0.00 43.37 3.91
1007 4558 3.859627 GCTTGTGTTTGATGCTTGATGCT 60.860 43.478 0.00 0.00 43.37 3.79
1008 4559 2.410730 GCTTGTGTTTGATGCTTGATGC 59.589 45.455 0.00 0.00 43.25 3.91
1053 4607 6.097915 TGGGTTTGTTCTTTGTTGTGTTAA 57.902 33.333 0.00 0.00 0.00 2.01
1054 4608 5.723672 TGGGTTTGTTCTTTGTTGTGTTA 57.276 34.783 0.00 0.00 0.00 2.41
1055 4609 4.608948 TGGGTTTGTTCTTTGTTGTGTT 57.391 36.364 0.00 0.00 0.00 3.32
1056 4610 4.466015 AGATGGGTTTGTTCTTTGTTGTGT 59.534 37.500 0.00 0.00 0.00 3.72
1064 4618 5.893824 GGATGGATAAGATGGGTTTGTTCTT 59.106 40.000 0.00 0.00 34.29 2.52
1066 4620 5.449553 AGGATGGATAAGATGGGTTTGTTC 58.550 41.667 0.00 0.00 0.00 3.18
1080 4641 3.960755 TCTCTTGCTTCGAAGGATGGATA 59.039 43.478 25.77 13.74 0.00 2.59
1101 4662 0.787183 GCCATCGCTAGCTCGAATTC 59.213 55.000 13.93 0.00 42.15 2.17
1104 4665 3.526430 AGCCATCGCTAGCTCGAA 58.474 55.556 13.93 0.00 46.08 3.71
1115 4681 1.505477 GCTTGAGCATCGGAGCCATC 61.505 60.000 0.00 0.00 39.91 3.51
1157 4723 4.729856 GTCACGTACGCCGCCCTT 62.730 66.667 16.72 0.00 41.42 3.95
1310 4876 3.959991 GACGAGGCAGCCCTGTTCC 62.960 68.421 8.22 0.00 43.12 3.62
1360 4926 2.971598 ATGGCGAACTGGGTCTGGG 61.972 63.158 0.00 0.00 0.00 4.45
1425 4995 7.345914 AGCTAGAGGATTAGTCAGTTGGTATTT 59.654 37.037 0.00 0.00 0.00 1.40
1432 5017 6.013554 AGAGAGCTAGAGGATTAGTCAGTT 57.986 41.667 0.00 0.00 0.00 3.16
1834 5441 5.299279 GTCCCTGAAGAACATGTTGAGAAAA 59.701 40.000 17.58 0.00 0.00 2.29
1978 5596 3.515502 TGAGGAAATCGATGACAAGGAGT 59.484 43.478 0.00 0.00 0.00 3.85
1979 5597 3.868077 GTGAGGAAATCGATGACAAGGAG 59.132 47.826 0.00 0.00 0.00 3.69
1980 5598 3.260632 TGTGAGGAAATCGATGACAAGGA 59.739 43.478 0.00 0.00 0.00 3.36
1981 5599 3.599343 TGTGAGGAAATCGATGACAAGG 58.401 45.455 0.00 0.00 0.00 3.61
1982 5600 5.611796 TTTGTGAGGAAATCGATGACAAG 57.388 39.130 0.00 0.00 0.00 3.16
2109 5747 4.903054 TCTTCACAAGCATCTTGATGTCT 58.097 39.130 12.89 7.00 0.00 3.41
2300 5951 2.797278 CCCCCTAGCTACGCCACTG 61.797 68.421 0.00 0.00 0.00 3.66
2301 5952 2.444140 CCCCCTAGCTACGCCACT 60.444 66.667 0.00 0.00 0.00 4.00
2302 5953 2.762875 ACCCCCTAGCTACGCCAC 60.763 66.667 0.00 0.00 0.00 5.01
2303 5954 2.762459 CACCCCCTAGCTACGCCA 60.762 66.667 0.00 0.00 0.00 5.69
2304 5955 3.547513 CCACCCCCTAGCTACGCC 61.548 72.222 0.00 0.00 0.00 5.68
2305 5956 4.237207 GCCACCCCCTAGCTACGC 62.237 72.222 0.00 0.00 0.00 4.42
2306 5957 3.547513 GGCCACCCCCTAGCTACG 61.548 72.222 0.00 0.00 0.00 3.51
2307 5958 2.366435 TGGCCACCCCCTAGCTAC 60.366 66.667 0.00 0.00 0.00 3.58
2308 5959 2.040884 CTGGCCACCCCCTAGCTA 60.041 66.667 0.00 0.00 0.00 3.32
2311 5962 2.039405 ATCCTGGCCACCCCCTAG 60.039 66.667 0.00 0.00 0.00 3.02
2312 5963 2.368192 CATCCTGGCCACCCCCTA 60.368 66.667 0.00 0.00 0.00 3.53
2315 5966 4.129148 GACCATCCTGGCCACCCC 62.129 72.222 0.00 0.00 42.67 4.95
2316 5967 4.129148 GGACCATCCTGGCCACCC 62.129 72.222 0.00 0.00 42.67 4.61
2317 5968 2.693871 ATGGACCATCCTGGCCACC 61.694 63.158 0.00 0.00 43.14 4.61
2318 5969 1.454479 CATGGACCATCCTGGCCAC 60.454 63.158 0.00 0.00 43.14 5.01
2319 5970 2.692824 CCATGGACCATCCTGGCCA 61.693 63.158 5.56 4.71 43.97 5.36
2320 5971 2.196776 CCATGGACCATCCTGGCC 59.803 66.667 5.56 0.00 42.67 5.36
2321 5972 1.152881 GTCCATGGACCATCCTGGC 60.153 63.158 31.37 5.53 42.67 4.85
2333 5984 2.102578 GAAATTCCAGGGTGGTCCATG 58.897 52.381 0.00 0.00 44.12 3.66
2334 5985 1.007118 GGAAATTCCAGGGTGGTCCAT 59.993 52.381 7.23 0.00 39.03 3.41
2335 5986 0.407918 GGAAATTCCAGGGTGGTCCA 59.592 55.000 7.23 0.00 39.03 4.02
2336 5987 0.324368 GGGAAATTCCAGGGTGGTCC 60.324 60.000 14.68 0.00 38.64 4.46
2337 5988 0.324368 GGGGAAATTCCAGGGTGGTC 60.324 60.000 14.68 0.00 38.64 4.02
2338 5989 1.077298 TGGGGAAATTCCAGGGTGGT 61.077 55.000 14.68 0.00 38.64 4.16
2339 5990 0.339510 ATGGGGAAATTCCAGGGTGG 59.660 55.000 14.68 0.00 38.64 4.61
2340 5991 2.949447 CTATGGGGAAATTCCAGGGTG 58.051 52.381 14.68 0.00 38.64 4.61
2341 5992 1.217942 GCTATGGGGAAATTCCAGGGT 59.782 52.381 14.68 0.00 38.64 4.34
2342 5993 1.500736 AGCTATGGGGAAATTCCAGGG 59.499 52.381 14.68 0.46 38.64 4.45
2343 5994 2.961062 CAAGCTATGGGGAAATTCCAGG 59.039 50.000 14.68 0.12 38.64 4.45
2344 5995 3.635591 ACAAGCTATGGGGAAATTCCAG 58.364 45.455 14.68 3.58 38.64 3.86
2345 5996 3.756082 ACAAGCTATGGGGAAATTCCA 57.244 42.857 14.68 0.00 38.64 3.53
2346 5997 9.700831 ATTATATACAAGCTATGGGGAAATTCC 57.299 33.333 2.79 2.79 35.23 3.01
2351 6002 9.333961 ACTACATTATATACAAGCTATGGGGAA 57.666 33.333 0.00 0.00 0.00 3.97
2352 6003 8.911018 ACTACATTATATACAAGCTATGGGGA 57.089 34.615 0.00 0.00 0.00 4.81
2411 6062 9.349713 GGTGGTCCATCAATAGAAATATTTACA 57.650 33.333 0.00 0.00 0.00 2.41
2412 6063 8.793592 GGGTGGTCCATCAATAGAAATATTTAC 58.206 37.037 4.07 0.00 35.00 2.01
2413 6064 8.732854 AGGGTGGTCCATCAATAGAAATATTTA 58.267 33.333 4.07 0.00 38.24 1.40
2414 6065 7.506938 CAGGGTGGTCCATCAATAGAAATATTT 59.493 37.037 4.07 0.00 38.24 1.40
2415 6066 7.006509 CAGGGTGGTCCATCAATAGAAATATT 58.993 38.462 4.07 0.00 38.24 1.28
2416 6067 6.332635 TCAGGGTGGTCCATCAATAGAAATAT 59.667 38.462 4.07 0.00 38.24 1.28
2417 6068 5.669904 TCAGGGTGGTCCATCAATAGAAATA 59.330 40.000 4.07 0.00 38.24 1.40
2418 6069 4.478317 TCAGGGTGGTCCATCAATAGAAAT 59.522 41.667 4.07 0.00 38.24 2.17
2419 6070 3.849574 TCAGGGTGGTCCATCAATAGAAA 59.150 43.478 4.07 0.00 38.24 2.52
2420 6071 3.459828 TCAGGGTGGTCCATCAATAGAA 58.540 45.455 4.07 0.00 38.24 2.10
2421 6072 3.129262 TCAGGGTGGTCCATCAATAGA 57.871 47.619 4.07 0.00 38.24 1.98
2422 6073 4.443978 AATCAGGGTGGTCCATCAATAG 57.556 45.455 4.07 0.00 38.24 1.73
2423 6074 4.879295 AAATCAGGGTGGTCCATCAATA 57.121 40.909 4.07 0.00 38.24 1.90
2424 6075 3.763557 AAATCAGGGTGGTCCATCAAT 57.236 42.857 4.07 0.00 38.24 2.57
2425 6076 4.879295 ATAAATCAGGGTGGTCCATCAA 57.121 40.909 4.07 0.00 38.24 2.57
2426 6077 4.535781 CAATAAATCAGGGTGGTCCATCA 58.464 43.478 4.07 0.00 38.24 3.07
2427 6078 3.891366 CCAATAAATCAGGGTGGTCCATC 59.109 47.826 0.00 0.00 38.24 3.51
2428 6079 3.374098 CCCAATAAATCAGGGTGGTCCAT 60.374 47.826 0.00 0.00 37.81 3.41
2429 6080 2.024464 CCCAATAAATCAGGGTGGTCCA 60.024 50.000 0.00 0.00 37.81 4.02
2430 6081 2.666317 CCCAATAAATCAGGGTGGTCC 58.334 52.381 0.00 0.00 37.81 4.46
2431 6082 2.031870 GCCCAATAAATCAGGGTGGTC 58.968 52.381 0.00 0.00 44.69 4.02
2432 6083 1.645919 AGCCCAATAAATCAGGGTGGT 59.354 47.619 0.00 0.00 44.69 4.16
2433 6084 2.034124 CAGCCCAATAAATCAGGGTGG 58.966 52.381 0.00 0.00 44.69 4.61
2434 6085 2.034124 CCAGCCCAATAAATCAGGGTG 58.966 52.381 0.00 0.00 44.69 4.61
2435 6086 1.689258 GCCAGCCCAATAAATCAGGGT 60.689 52.381 0.00 0.00 44.69 4.34
2436 6087 1.043022 GCCAGCCCAATAAATCAGGG 58.957 55.000 0.00 0.00 45.68 4.45
2437 6088 2.077687 AGCCAGCCCAATAAATCAGG 57.922 50.000 0.00 0.00 0.00 3.86
2438 6089 2.549754 CGTAGCCAGCCCAATAAATCAG 59.450 50.000 0.00 0.00 0.00 2.90
2439 6090 2.571212 CGTAGCCAGCCCAATAAATCA 58.429 47.619 0.00 0.00 0.00 2.57
2455 6106 2.202440 CGACGACCAGTGGCGTAG 60.202 66.667 24.90 21.71 36.12 3.51
2456 6107 4.409218 GCGACGACCAGTGGCGTA 62.409 66.667 24.90 0.00 44.27 4.42
2460 6111 3.006756 ATCCTGCGACGACCAGTGG 62.007 63.158 7.91 7.91 0.00 4.00
2461 6112 1.807165 CATCCTGCGACGACCAGTG 60.807 63.158 0.00 0.00 0.00 3.66
2462 6113 1.323271 ATCATCCTGCGACGACCAGT 61.323 55.000 0.00 0.00 0.00 4.00
2463 6114 0.179100 AATCATCCTGCGACGACCAG 60.179 55.000 0.00 0.00 0.00 4.00
2464 6115 1.107945 TAATCATCCTGCGACGACCA 58.892 50.000 0.00 0.00 0.00 4.02
2465 6116 2.218953 TTAATCATCCTGCGACGACC 57.781 50.000 0.00 0.00 0.00 4.79
2466 6117 5.462398 ACTTAATTAATCATCCTGCGACGAC 59.538 40.000 0.00 0.00 0.00 4.34
2467 6118 5.462068 CACTTAATTAATCATCCTGCGACGA 59.538 40.000 0.00 0.00 0.00 4.20
2468 6119 5.670097 CACTTAATTAATCATCCTGCGACG 58.330 41.667 0.00 0.00 0.00 5.12
2469 6120 5.237344 AGCACTTAATTAATCATCCTGCGAC 59.763 40.000 0.00 0.00 0.00 5.19
2470 6121 5.368145 AGCACTTAATTAATCATCCTGCGA 58.632 37.500 0.00 0.00 0.00 5.10
2471 6122 5.679734 AGCACTTAATTAATCATCCTGCG 57.320 39.130 0.00 0.00 0.00 5.18
2472 6123 6.486657 TGGTAGCACTTAATTAATCATCCTGC 59.513 38.462 0.00 0.43 0.00 4.85
2473 6124 7.716998 ACTGGTAGCACTTAATTAATCATCCTG 59.283 37.037 0.00 4.64 0.00 3.86
2476 6127 9.209175 CCTACTGGTAGCACTTAATTAATCATC 57.791 37.037 0.00 0.00 31.95 2.92
2495 6149 3.577805 AAATCCGAAATCCCCTACTGG 57.422 47.619 0.00 0.00 0.00 4.00
2500 6154 3.118038 TCATCGAAAATCCGAAATCCCCT 60.118 43.478 0.00 0.00 42.22 4.79
2501 6155 3.211045 TCATCGAAAATCCGAAATCCCC 58.789 45.455 0.00 0.00 42.22 4.81
2504 6158 6.776094 AGTTCTTCATCGAAAATCCGAAATC 58.224 36.000 0.00 0.00 42.22 2.17
2505 6159 6.743575 AGTTCTTCATCGAAAATCCGAAAT 57.256 33.333 0.00 0.00 42.22 2.17
2506 6160 7.843490 ATAGTTCTTCATCGAAAATCCGAAA 57.157 32.000 0.00 0.00 42.22 3.46
2507 6161 8.195436 AGTATAGTTCTTCATCGAAAATCCGAA 58.805 33.333 0.00 0.00 42.22 4.30
2508 6162 7.648112 CAGTATAGTTCTTCATCGAAAATCCGA 59.352 37.037 0.00 0.00 43.16 4.55
2509 6163 7.435488 ACAGTATAGTTCTTCATCGAAAATCCG 59.565 37.037 0.00 0.00 0.00 4.18
2534 6199 9.163899 TCCTGATCATACTTCGATACTATACAC 57.836 37.037 0.00 0.00 0.00 2.90
2537 6202 9.262358 CGATCCTGATCATACTTCGATACTATA 57.738 37.037 7.82 0.00 37.69 1.31
2538 6203 7.988028 TCGATCCTGATCATACTTCGATACTAT 59.012 37.037 13.05 0.00 37.69 2.12
2539 6204 7.328737 TCGATCCTGATCATACTTCGATACTA 58.671 38.462 13.05 0.00 37.69 1.82
2612 6279 4.189639 AGAAACACGGGACTAGATTGAC 57.810 45.455 0.00 0.00 0.00 3.18
2625 6292 4.264380 GTGCCAACTAAAACAAGAAACACG 59.736 41.667 0.00 0.00 0.00 4.49
2644 6311 1.084289 ACGCCTCTATTTTTCGTGCC 58.916 50.000 0.00 0.00 31.74 5.01
2688 6365 1.624487 TCAGCAATACACGCACGTAG 58.376 50.000 0.00 0.00 0.00 3.51
2694 6371 4.663889 GCAAAATGTTTCAGCAATACACGC 60.664 41.667 0.00 0.00 0.00 5.34
2703 6380 2.803956 AGCACATGCAAAATGTTTCAGC 59.196 40.909 6.64 0.00 45.16 4.26
2704 6381 7.815398 TTATAGCACATGCAAAATGTTTCAG 57.185 32.000 6.64 0.00 45.16 3.02
2705 6382 9.866798 TTATTATAGCACATGCAAAATGTTTCA 57.133 25.926 6.64 0.00 45.16 2.69
2791 6475 1.334059 GCCTCACACAAACACGACATG 60.334 52.381 0.00 0.00 0.00 3.21
2792 6476 0.944386 GCCTCACACAAACACGACAT 59.056 50.000 0.00 0.00 0.00 3.06
2793 6477 1.092921 GGCCTCACACAAACACGACA 61.093 55.000 0.00 0.00 0.00 4.35
2794 6478 1.647084 GGCCTCACACAAACACGAC 59.353 57.895 0.00 0.00 0.00 4.34
2814 6498 6.044046 ACTCATACGACCGTAATTTGCAATA 58.956 36.000 0.00 0.00 33.99 1.90
2815 6499 4.873827 ACTCATACGACCGTAATTTGCAAT 59.126 37.500 0.00 0.00 33.99 3.56
2816 6500 4.247258 ACTCATACGACCGTAATTTGCAA 58.753 39.130 6.36 0.00 33.99 4.08
2817 6501 3.852286 ACTCATACGACCGTAATTTGCA 58.148 40.909 6.36 0.00 33.99 4.08
2818 6502 4.565564 AGAACTCATACGACCGTAATTTGC 59.434 41.667 6.36 0.00 33.99 3.68
2820 6504 5.063060 GCAAGAACTCATACGACCGTAATTT 59.937 40.000 6.36 0.00 33.99 1.82
2821 6505 4.565564 GCAAGAACTCATACGACCGTAATT 59.434 41.667 6.36 0.00 33.99 1.40
2822 6506 4.110482 GCAAGAACTCATACGACCGTAAT 58.890 43.478 6.36 0.00 33.99 1.89
2823 6507 3.504863 GCAAGAACTCATACGACCGTAA 58.495 45.455 6.36 0.00 33.99 3.18
2827 6511 1.278238 CCGCAAGAACTCATACGACC 58.722 55.000 0.00 0.00 43.02 4.79
2828 6512 1.278238 CCCGCAAGAACTCATACGAC 58.722 55.000 0.00 0.00 43.02 4.34
2829 6513 0.174845 CCCCGCAAGAACTCATACGA 59.825 55.000 0.00 0.00 43.02 3.43
2849 6533 3.320078 CTAATCGGGCGCGTCGTG 61.320 66.667 23.19 9.27 0.00 4.35
2884 6622 1.746727 CGCGCGGATCAGAAGACAAG 61.747 60.000 24.84 0.00 0.00 3.16
2885 6623 1.805539 CGCGCGGATCAGAAGACAA 60.806 57.895 24.84 0.00 0.00 3.18
2923 7112 2.341101 CCAGCTACGACCAGTCCGT 61.341 63.158 0.00 0.00 43.26 4.69
2967 7157 0.472471 GTGGACAACAGGACAAGGGA 59.528 55.000 0.00 0.00 0.00 4.20
2970 7160 3.678921 TCGTGGACAACAGGACAAG 57.321 52.632 0.00 0.00 38.93 3.16
2974 7164 0.822944 TACGGTCGTGGACAACAGGA 60.823 55.000 6.25 0.00 41.34 3.86
2975 7165 0.032403 TTACGGTCGTGGACAACAGG 59.968 55.000 6.25 0.00 33.68 4.00
2976 7166 1.134226 GTTACGGTCGTGGACAACAG 58.866 55.000 6.25 0.00 33.68 3.16
2977 7167 0.459078 TGTTACGGTCGTGGACAACA 59.541 50.000 6.25 5.95 33.68 3.33
3032 7224 4.830765 TTAATGCTCGCCGCGCCT 62.831 61.111 8.21 0.00 43.27 5.52
3043 7235 0.657368 CGCGAGGCCGAAATTAATGC 60.657 55.000 0.00 0.00 38.22 3.56
3045 7237 1.798813 GATCGCGAGGCCGAAATTAAT 59.201 47.619 16.66 0.00 41.01 1.40
3046 7238 1.214367 GATCGCGAGGCCGAAATTAA 58.786 50.000 16.66 0.00 41.01 1.40
3047 7239 0.937699 CGATCGCGAGGCCGAAATTA 60.938 55.000 16.66 0.00 41.01 1.40
3048 7240 2.237751 CGATCGCGAGGCCGAAATT 61.238 57.895 16.66 0.00 41.01 1.82
3049 7241 2.658593 CGATCGCGAGGCCGAAAT 60.659 61.111 16.66 0.00 41.01 2.17
3064 7268 0.320374 AGAGGATTTTGACACGCCGA 59.680 50.000 0.00 0.00 0.00 5.54
3205 7596 5.404466 TCCATTTTTGGATAAGTTGCTGG 57.596 39.130 0.00 0.00 32.09 4.85
3211 7602 6.549364 TGTCACTGTTCCATTTTTGGATAAGT 59.451 34.615 0.00 0.68 37.87 2.24
3219 7610 3.066203 GTCGGTGTCACTGTTCCATTTTT 59.934 43.478 11.59 0.00 0.00 1.94
3220 7611 2.616842 GTCGGTGTCACTGTTCCATTTT 59.383 45.455 11.59 0.00 0.00 1.82
3221 7612 2.218603 GTCGGTGTCACTGTTCCATTT 58.781 47.619 11.59 0.00 0.00 2.32
3225 7616 0.938168 GTCGTCGGTGTCACTGTTCC 60.938 60.000 11.59 1.09 0.00 3.62
3226 7617 0.248743 TGTCGTCGGTGTCACTGTTC 60.249 55.000 11.59 5.84 0.00 3.18
3230 7621 1.002033 GTAACTGTCGTCGGTGTCACT 60.002 52.381 2.35 0.00 32.95 3.41
3250 7641 5.371344 AATCGAACGCTTTGAACGTATAG 57.629 39.130 0.00 0.00 44.30 1.31
3251 7642 5.766702 AAATCGAACGCTTTGAACGTATA 57.233 34.783 0.00 0.00 44.30 1.47
3252 7643 4.657075 AAATCGAACGCTTTGAACGTAT 57.343 36.364 0.00 0.00 44.30 3.06
3253 7644 4.455917 AAAATCGAACGCTTTGAACGTA 57.544 36.364 0.00 0.00 44.30 3.57
3255 7646 4.259734 CCATAAAATCGAACGCTTTGAACG 59.740 41.667 0.00 0.00 0.00 3.95
3256 7647 5.283012 GTCCATAAAATCGAACGCTTTGAAC 59.717 40.000 0.00 0.00 0.00 3.18
3257 7648 5.049336 TGTCCATAAAATCGAACGCTTTGAA 60.049 36.000 0.00 0.00 0.00 2.69
3258 7649 4.452795 TGTCCATAAAATCGAACGCTTTGA 59.547 37.500 0.00 0.00 0.00 2.69
3259 7650 4.553429 GTGTCCATAAAATCGAACGCTTTG 59.447 41.667 0.00 0.00 0.00 2.77
3260 7651 4.454504 AGTGTCCATAAAATCGAACGCTTT 59.545 37.500 0.00 0.00 0.00 3.51
3261 7652 4.000988 AGTGTCCATAAAATCGAACGCTT 58.999 39.130 0.00 0.00 0.00 4.68
3262 7653 3.596214 AGTGTCCATAAAATCGAACGCT 58.404 40.909 0.00 0.00 0.00 5.07
3263 7654 3.541516 CGAGTGTCCATAAAATCGAACGC 60.542 47.826 0.00 0.00 32.13 4.84
3264 7655 3.000078 CCGAGTGTCCATAAAATCGAACG 60.000 47.826 0.00 0.00 32.13 3.95
3265 7656 3.242316 GCCGAGTGTCCATAAAATCGAAC 60.242 47.826 0.00 0.00 32.13 3.95
3266 7657 2.933906 GCCGAGTGTCCATAAAATCGAA 59.066 45.455 0.00 0.00 32.13 3.71
3267 7658 2.546778 GCCGAGTGTCCATAAAATCGA 58.453 47.619 0.00 0.00 32.13 3.59
3268 7659 1.597663 GGCCGAGTGTCCATAAAATCG 59.402 52.381 0.00 0.00 0.00 3.34
3269 7660 1.597663 CGGCCGAGTGTCCATAAAATC 59.402 52.381 24.07 0.00 0.00 2.17
3270 7661 1.663695 CGGCCGAGTGTCCATAAAAT 58.336 50.000 24.07 0.00 0.00 1.82
3271 7662 0.391927 CCGGCCGAGTGTCCATAAAA 60.392 55.000 30.73 0.00 0.00 1.52
3272 7663 1.219664 CCGGCCGAGTGTCCATAAA 59.780 57.895 30.73 0.00 0.00 1.40
3273 7664 1.546589 AACCGGCCGAGTGTCCATAA 61.547 55.000 30.73 0.00 0.00 1.90
3274 7665 1.546589 AAACCGGCCGAGTGTCCATA 61.547 55.000 30.73 0.00 0.00 2.74
3275 7666 2.798148 GAAACCGGCCGAGTGTCCAT 62.798 60.000 30.73 6.18 0.00 3.41
3276 7667 3.524648 GAAACCGGCCGAGTGTCCA 62.525 63.158 30.73 0.00 0.00 4.02
3277 7668 2.741211 GAAACCGGCCGAGTGTCC 60.741 66.667 30.73 11.42 0.00 4.02
3278 7669 1.359459 GATGAAACCGGCCGAGTGTC 61.359 60.000 30.73 25.69 0.00 3.67
3279 7670 1.375523 GATGAAACCGGCCGAGTGT 60.376 57.895 30.73 18.38 0.00 3.55
3280 7671 2.452813 CGATGAAACCGGCCGAGTG 61.453 63.158 30.73 13.32 0.00 3.51
3281 7672 1.956629 ATCGATGAAACCGGCCGAGT 61.957 55.000 30.73 20.44 32.60 4.18
3282 7673 1.215655 GATCGATGAAACCGGCCGAG 61.216 60.000 30.73 19.69 32.60 4.63
3283 7674 1.227147 GATCGATGAAACCGGCCGA 60.227 57.895 30.73 6.25 0.00 5.54
3284 7675 2.585869 CGATCGATGAAACCGGCCG 61.586 63.158 21.04 21.04 0.00 6.13
3285 7676 2.882366 GCGATCGATGAAACCGGCC 61.882 63.158 21.57 0.00 0.00 6.13
3286 7677 2.171079 TGCGATCGATGAAACCGGC 61.171 57.895 21.57 0.00 0.00 6.13
3287 7678 1.636340 GTGCGATCGATGAAACCGG 59.364 57.895 21.57 0.00 0.00 5.28
3288 7679 1.269810 CGTGCGATCGATGAAACCG 59.730 57.895 21.57 0.00 0.00 4.44
3289 7680 0.804544 TCCGTGCGATCGATGAAACC 60.805 55.000 21.57 0.00 0.00 3.27
3290 7681 0.996462 TTCCGTGCGATCGATGAAAC 59.004 50.000 21.57 7.23 0.00 2.78
3291 7682 0.996462 GTTCCGTGCGATCGATGAAA 59.004 50.000 21.57 2.75 0.00 2.69
3292 7683 1.137459 CGTTCCGTGCGATCGATGAA 61.137 55.000 21.57 11.67 36.04 2.57
3293 7684 1.585261 CGTTCCGTGCGATCGATGA 60.585 57.895 21.57 5.75 36.04 2.92
3294 7685 2.576893 CCGTTCCGTGCGATCGATG 61.577 63.158 21.57 9.37 36.04 3.84
3295 7686 2.278596 CCGTTCCGTGCGATCGAT 60.279 61.111 21.57 0.00 36.04 3.59
3296 7687 4.485834 CCCGTTCCGTGCGATCGA 62.486 66.667 21.57 0.59 36.04 3.59
3297 7688 4.789075 ACCCGTTCCGTGCGATCG 62.789 66.667 11.69 11.69 34.16 3.69
3298 7689 2.884207 GACCCGTTCCGTGCGATC 60.884 66.667 0.00 0.00 0.00 3.69
3299 7690 2.901051 GATGACCCGTTCCGTGCGAT 62.901 60.000 0.00 0.00 0.00 4.58
3300 7691 3.636313 GATGACCCGTTCCGTGCGA 62.636 63.158 0.00 0.00 0.00 5.10
3301 7692 3.186047 GATGACCCGTTCCGTGCG 61.186 66.667 0.00 0.00 0.00 5.34
3302 7693 2.100631 CAGATGACCCGTTCCGTGC 61.101 63.158 0.00 0.00 0.00 5.34
3303 7694 0.528924 TACAGATGACCCGTTCCGTG 59.471 55.000 0.00 0.00 0.00 4.94
3304 7695 0.815734 CTACAGATGACCCGTTCCGT 59.184 55.000 0.00 0.00 0.00 4.69
3305 7696 1.100510 TCTACAGATGACCCGTTCCG 58.899 55.000 0.00 0.00 0.00 4.30
3306 7697 1.822990 TGTCTACAGATGACCCGTTCC 59.177 52.381 0.00 0.00 33.83 3.62
3307 7698 3.802948 ATGTCTACAGATGACCCGTTC 57.197 47.619 0.00 0.00 33.83 3.95
3308 7699 3.428999 CGAATGTCTACAGATGACCCGTT 60.429 47.826 0.00 0.00 33.83 4.44
3309 7700 2.099263 CGAATGTCTACAGATGACCCGT 59.901 50.000 0.00 0.00 33.83 5.28
3310 7701 2.543861 CCGAATGTCTACAGATGACCCG 60.544 54.545 0.00 0.00 33.83 5.28
3311 7702 2.803492 GCCGAATGTCTACAGATGACCC 60.803 54.545 0.00 0.00 33.83 4.46
3312 7703 2.474816 GCCGAATGTCTACAGATGACC 58.525 52.381 0.00 0.00 33.83 4.02
3313 7704 2.474816 GGCCGAATGTCTACAGATGAC 58.525 52.381 0.00 0.00 35.21 3.06
3314 7705 1.067060 CGGCCGAATGTCTACAGATGA 59.933 52.381 24.07 0.00 0.00 2.92
3315 7706 1.491670 CGGCCGAATGTCTACAGATG 58.508 55.000 24.07 0.00 0.00 2.90
3316 7707 0.389391 CCGGCCGAATGTCTACAGAT 59.611 55.000 30.73 0.00 0.00 2.90
3317 7708 0.968901 ACCGGCCGAATGTCTACAGA 60.969 55.000 30.73 0.00 0.00 3.41
3318 7709 0.108329 AACCGGCCGAATGTCTACAG 60.108 55.000 30.73 8.09 0.00 2.74
3319 7710 1.135024 GTAACCGGCCGAATGTCTACA 60.135 52.381 30.73 0.00 0.00 2.74
3320 7711 1.135721 AGTAACCGGCCGAATGTCTAC 59.864 52.381 30.73 18.52 0.00 2.59
3321 7712 1.477553 AGTAACCGGCCGAATGTCTA 58.522 50.000 30.73 8.54 0.00 2.59
3322 7713 1.135721 GTAGTAACCGGCCGAATGTCT 59.864 52.381 30.73 19.21 0.00 3.41
3323 7714 1.135024 TGTAGTAACCGGCCGAATGTC 60.135 52.381 30.73 12.78 0.00 3.06
3324 7715 0.896923 TGTAGTAACCGGCCGAATGT 59.103 50.000 30.73 14.13 0.00 2.71
3325 7716 1.567504 CTGTAGTAACCGGCCGAATG 58.432 55.000 30.73 13.32 0.00 2.67
3326 7717 0.179092 GCTGTAGTAACCGGCCGAAT 60.179 55.000 30.73 17.71 0.00 3.34
3327 7718 1.216178 GCTGTAGTAACCGGCCGAA 59.784 57.895 30.73 9.00 0.00 4.30
3328 7719 0.394216 TAGCTGTAGTAACCGGCCGA 60.394 55.000 30.73 2.89 0.00 5.54
3329 7720 0.030369 CTAGCTGTAGTAACCGGCCG 59.970 60.000 21.04 21.04 0.00 6.13
3330 7721 1.066757 GACTAGCTGTAGTAACCGGCC 59.933 57.143 0.00 0.00 39.78 6.13
3331 7722 1.066757 GGACTAGCTGTAGTAACCGGC 59.933 57.143 0.00 0.00 39.78 6.13
3332 7723 2.358267 CAGGACTAGCTGTAGTAACCGG 59.642 54.545 0.00 0.00 39.78 5.28
3333 7724 2.223525 GCAGGACTAGCTGTAGTAACCG 60.224 54.545 0.00 0.00 39.78 4.44
3334 7725 2.758979 TGCAGGACTAGCTGTAGTAACC 59.241 50.000 0.00 0.00 39.78 2.85
3335 7726 3.735514 GCTGCAGGACTAGCTGTAGTAAC 60.736 52.174 17.12 0.00 39.78 2.50
3336 7727 2.427453 GCTGCAGGACTAGCTGTAGTAA 59.573 50.000 17.12 0.00 39.78 2.24
3337 7728 2.025155 GCTGCAGGACTAGCTGTAGTA 58.975 52.381 17.12 0.00 39.78 1.82
3338 7729 0.820871 GCTGCAGGACTAGCTGTAGT 59.179 55.000 17.12 0.00 42.59 2.73
3339 7730 0.103937 GGCTGCAGGACTAGCTGTAG 59.896 60.000 17.12 9.94 39.80 2.74
3340 7731 0.324738 AGGCTGCAGGACTAGCTGTA 60.325 55.000 17.12 0.00 39.80 2.74
3341 7732 1.197430 AAGGCTGCAGGACTAGCTGT 61.197 55.000 17.12 0.00 39.80 4.40
3342 7733 0.743701 CAAGGCTGCAGGACTAGCTG 60.744 60.000 17.12 0.00 39.80 4.24
3343 7734 0.906756 TCAAGGCTGCAGGACTAGCT 60.907 55.000 17.12 0.00 39.80 3.32
3344 7735 0.742635 GTCAAGGCTGCAGGACTAGC 60.743 60.000 17.12 0.00 39.17 3.42
3345 7736 0.610174 TGTCAAGGCTGCAGGACTAG 59.390 55.000 17.12 0.00 29.69 2.57
3346 7737 1.065926 CATGTCAAGGCTGCAGGACTA 60.066 52.381 17.12 5.78 29.69 2.59
3347 7738 0.322277 CATGTCAAGGCTGCAGGACT 60.322 55.000 17.12 0.00 32.36 3.85
3348 7739 0.321919 TCATGTCAAGGCTGCAGGAC 60.322 55.000 17.12 14.32 0.00 3.85
3349 7740 0.035725 CTCATGTCAAGGCTGCAGGA 60.036 55.000 17.12 0.36 0.00 3.86
3350 7741 1.654954 GCTCATGTCAAGGCTGCAGG 61.655 60.000 17.12 0.00 0.00 4.85
3351 7742 1.801332 GCTCATGTCAAGGCTGCAG 59.199 57.895 10.11 10.11 0.00 4.41
3352 7743 2.036571 CGCTCATGTCAAGGCTGCA 61.037 57.895 0.50 0.00 0.00 4.41
3353 7744 2.758089 CCGCTCATGTCAAGGCTGC 61.758 63.158 0.00 0.00 0.00 5.25
3354 7745 2.110967 CCCGCTCATGTCAAGGCTG 61.111 63.158 0.00 0.00 0.00 4.85
3355 7746 2.270205 CCCGCTCATGTCAAGGCT 59.730 61.111 0.00 0.00 0.00 4.58
3356 7747 3.512516 GCCCGCTCATGTCAAGGC 61.513 66.667 0.00 0.00 0.00 4.35
3357 7748 2.825836 GGCCCGCTCATGTCAAGG 60.826 66.667 0.00 0.00 0.00 3.61
3358 7749 3.197790 CGGCCCGCTCATGTCAAG 61.198 66.667 0.00 0.00 0.00 3.02
3359 7750 4.776322 CCGGCCCGCTCATGTCAA 62.776 66.667 0.00 0.00 0.00 3.18
3383 7774 4.016629 TCGTCCGTCCGTGTGTCG 62.017 66.667 0.00 0.00 39.52 4.35
3384 7775 2.428071 GTCGTCCGTCCGTGTGTC 60.428 66.667 0.00 0.00 0.00 3.67
3385 7776 4.318021 CGTCGTCCGTCCGTGTGT 62.318 66.667 0.00 0.00 0.00 3.72
3395 7786 4.580044 CATGCATGCGCGTCGTCC 62.580 66.667 14.93 0.00 42.97 4.79
3396 7787 4.580044 CCATGCATGCGCGTCGTC 62.580 66.667 21.69 0.00 42.97 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.