Multiple sequence alignment - TraesCS2D01G091000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G091000 chr2D 100.000 4031 0 0 1 4031 43264337 43260307 0.000000e+00 7444
1 TraesCS2D01G091000 chr2D 92.096 291 21 2 3199 3487 590369534 590369244 3.750000e-110 409
2 TraesCS2D01G091000 chr2B 92.515 3260 144 52 1 3202 67994201 67990984 0.000000e+00 4577
3 TraesCS2D01G091000 chr2B 92.361 288 21 1 3200 3486 111009413 111009126 3.750000e-110 409
4 TraesCS2D01G091000 chr2B 88.199 161 18 1 3868 4028 67988650 67988491 1.480000e-44 191
5 TraesCS2D01G091000 chr2A 92.689 3146 147 43 109 3202 44821159 44818045 0.000000e+00 4458
6 TraesCS2D01G091000 chr2A 86.486 370 44 5 3664 4031 44817526 44817161 6.280000e-108 401
7 TraesCS2D01G091000 chr2A 88.636 176 15 3 3483 3656 44818044 44817872 4.080000e-50 209
8 TraesCS2D01G091000 chr7B 88.957 2291 194 30 921 3184 490848627 490846369 0.000000e+00 2774
9 TraesCS2D01G091000 chr7A 88.860 2307 187 34 914 3184 533331223 533333495 0.000000e+00 2772
10 TraesCS2D01G091000 chr7D 88.826 2300 195 32 921 3190 467514607 467512340 0.000000e+00 2767
11 TraesCS2D01G091000 chr5A 87.440 414 50 1 2065 2478 328993567 328993978 3.650000e-130 475
12 TraesCS2D01G091000 chr5A 81.618 136 24 1 1 136 528952814 528952948 1.180000e-20 111
13 TraesCS2D01G091000 chr5D 93.684 285 16 2 3200 3483 545532367 545532650 3.720000e-115 425
14 TraesCS2D01G091000 chr5D 91.304 299 24 2 3187 3483 450608753 450609051 1.350000e-109 407
15 TraesCS2D01G091000 chr4A 92.958 284 20 0 3202 3485 11842763 11843046 8.060000e-112 414
16 TraesCS2D01G091000 chr4A 91.809 293 20 4 3195 3485 619765472 619765762 4.850000e-109 405
17 TraesCS2D01G091000 chr4A 82.857 175 26 4 3661 3833 691646040 691645868 1.940000e-33 154
18 TraesCS2D01G091000 chr4A 79.412 170 33 2 3661 3830 79936779 79936946 7.080000e-23 119
19 TraesCS2D01G091000 chr3D 92.683 287 20 1 3202 3487 536025588 536025874 2.900000e-111 412
20 TraesCS2D01G091000 chr3D 83.069 189 24 8 3653 3839 554769042 554769224 8.960000e-37 165
21 TraesCS2D01G091000 chr3D 82.081 173 28 2 3661 3833 98538181 98538350 1.170000e-30 145
22 TraesCS2D01G091000 chr6B 92.933 283 19 1 3202 3483 578559173 578559455 1.040000e-110 411
23 TraesCS2D01G091000 chr5B 92.096 291 20 3 3194 3483 671039511 671039799 1.350000e-109 407
24 TraesCS2D01G091000 chrUn 83.069 189 24 8 3653 3839 45262170 45261988 8.960000e-37 165
25 TraesCS2D01G091000 chr1B 82.222 180 27 5 3661 3838 658262469 658262645 2.510000e-32 150
26 TraesCS2D01G091000 chr6A 83.007 153 25 1 3687 3839 437023254 437023405 1.950000e-28 137
27 TraesCS2D01G091000 chr1A 83.784 148 21 3 3687 3834 337949407 337949263 1.950000e-28 137
28 TraesCS2D01G091000 chr3A 76.754 228 39 14 1 226 725107966 725107751 9.160000e-22 115
29 TraesCS2D01G091000 chr4B 80.690 145 26 2 12 156 73307805 73307663 1.180000e-20 111


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G091000 chr2D 43260307 43264337 4030 True 7444.000000 7444 100.000000 1 4031 1 chr2D.!!$R1 4030
1 TraesCS2D01G091000 chr2B 67988491 67994201 5710 True 2384.000000 4577 90.357000 1 4028 2 chr2B.!!$R2 4027
2 TraesCS2D01G091000 chr2A 44817161 44821159 3998 True 1689.333333 4458 89.270333 109 4031 3 chr2A.!!$R1 3922
3 TraesCS2D01G091000 chr7B 490846369 490848627 2258 True 2774.000000 2774 88.957000 921 3184 1 chr7B.!!$R1 2263
4 TraesCS2D01G091000 chr7A 533331223 533333495 2272 False 2772.000000 2772 88.860000 914 3184 1 chr7A.!!$F1 2270
5 TraesCS2D01G091000 chr7D 467512340 467514607 2267 True 2767.000000 2767 88.826000 921 3190 1 chr7D.!!$R1 2269

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 125 0.040157 TCGGTGTTTGTAGTCGTCGG 60.040 55.0 0.00 0.00 0.00 4.79 F
563 572 0.248377 CCAGCGCAGTACGTACTACC 60.248 60.0 26.95 18.95 46.11 3.18 F
564 573 0.448990 CAGCGCAGTACGTACTACCA 59.551 55.0 26.95 0.00 46.11 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2046 2161 1.456287 GAACACCACCAGCTTCCCT 59.544 57.895 0.0 0.0 0.00 4.20 R
2545 2660 0.108520 ACAACGGCGTATTCGGTCAT 60.109 50.000 15.2 0.0 37.56 3.06 R
3038 3153 1.003866 CGGGCATCGTAAAAGCTAAGC 60.004 52.381 0.0 0.0 0.00 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.003480 AGGCTTTAGCACGATGACTTTC 58.997 45.455 3.88 0.00 44.36 2.62
32 33 1.983972 AGCACGATGACTTTCTCGAC 58.016 50.000 0.00 0.00 38.24 4.20
79 80 1.760086 CCTGTGAGGGAGAGGCGAT 60.760 63.158 0.00 0.00 0.00 4.58
82 83 0.397675 TGTGAGGGAGAGGCGATGAT 60.398 55.000 0.00 0.00 0.00 2.45
124 125 0.040157 TCGGTGTTTGTAGTCGTCGG 60.040 55.000 0.00 0.00 0.00 4.79
280 289 5.371629 GCATTTGTAGTTTCGTACTGTGTC 58.628 41.667 3.71 0.00 37.73 3.67
442 451 2.123988 TTGCTTAAGTTGGCGTGCGG 62.124 55.000 4.02 0.00 0.00 5.69
443 452 2.867472 CTTAAGTTGGCGTGCGGG 59.133 61.111 0.00 0.00 0.00 6.13
444 453 3.322706 CTTAAGTTGGCGTGCGGGC 62.323 63.158 0.00 0.00 42.69 6.13
470 479 1.560860 GCACACTTGACTCTCGGCAC 61.561 60.000 0.00 0.00 0.00 5.01
502 511 1.902765 ATCACGTGCTCCCATGCTCA 61.903 55.000 11.67 0.00 0.00 4.26
527 536 1.015109 GAGCCACTCATGCATGTCTG 58.985 55.000 25.43 19.65 0.00 3.51
545 554 3.945921 GTCTGGTCTTAATAAGCAACCCC 59.054 47.826 8.00 0.00 0.00 4.95
546 555 3.589735 TCTGGTCTTAATAAGCAACCCCA 59.410 43.478 8.00 3.12 0.00 4.96
547 556 3.947834 CTGGTCTTAATAAGCAACCCCAG 59.052 47.826 8.00 7.75 0.00 4.45
550 559 1.065551 CTTAATAAGCAACCCCAGCGC 59.934 52.381 0.00 0.00 37.01 5.92
557 566 3.622826 AACCCCAGCGCAGTACGT 61.623 61.111 11.47 0.00 46.11 3.57
558 567 2.277591 AACCCCAGCGCAGTACGTA 61.278 57.895 11.47 0.00 46.11 3.57
559 568 2.202703 CCCCAGCGCAGTACGTAC 60.203 66.667 18.10 18.10 46.11 3.67
560 569 2.707849 CCCCAGCGCAGTACGTACT 61.708 63.158 22.45 22.45 46.11 2.73
561 570 1.378882 CCCCAGCGCAGTACGTACTA 61.379 60.000 26.95 0.00 46.11 1.82
563 572 0.248377 CCAGCGCAGTACGTACTACC 60.248 60.000 26.95 18.95 46.11 3.18
564 573 0.448990 CAGCGCAGTACGTACTACCA 59.551 55.000 26.95 0.00 46.11 3.25
565 574 0.449388 AGCGCAGTACGTACTACCAC 59.551 55.000 26.95 15.17 46.11 4.16
587 598 1.335051 ACACGTGAGTCGAGTGTGATG 60.335 52.381 25.01 3.59 45.99 3.07
792 817 2.050077 TGTCAGTCAGCGCACTCG 60.050 61.111 11.47 0.71 39.07 4.18
850 900 2.987821 GTCTGCGTGGAAGTCTAAAGAC 59.012 50.000 1.72 1.72 45.08 3.01
871 928 3.181465 ACAGAACATTCACAAGGACGACT 60.181 43.478 0.00 0.00 0.00 4.18
994 1088 1.302832 CTCCCCCTGCACAGTGTTC 60.303 63.158 1.61 0.00 0.00 3.18
1459 1562 1.153249 CTCTCCGAGCTCGACCTCT 60.153 63.158 36.59 0.00 43.02 3.69
1755 1858 0.473326 GAGGCCTCCAGATGCTCAAT 59.527 55.000 23.19 0.00 0.00 2.57
1779 1882 2.737252 CTCTTACAACAACTTCTCCGGC 59.263 50.000 0.00 0.00 0.00 6.13
1785 1888 1.302832 CAACTTCTCCGGCCAGCTT 60.303 57.895 2.24 0.00 0.00 3.74
1816 1919 4.069232 CGGCCTCGAGCTTCACCA 62.069 66.667 6.99 0.00 43.05 4.17
2073 2188 4.265056 GTGGTGTTCCAGGGCGGT 62.265 66.667 0.00 0.00 45.24 5.68
2127 2242 2.352805 GGGCAGGTGGTGGAGAAG 59.647 66.667 0.00 0.00 0.00 2.85
2545 2660 1.642037 CGAGTACTTCGTGCCGAGGA 61.642 60.000 12.34 0.00 44.27 3.71
2559 2674 0.663568 CGAGGATGACCGAATACGCC 60.664 60.000 0.00 0.00 41.83 5.68
2562 2677 0.529119 GGATGACCGAATACGCCGTT 60.529 55.000 0.00 0.00 38.29 4.44
2565 2680 0.733566 TGACCGAATACGCCGTTGTC 60.734 55.000 0.00 0.00 38.29 3.18
2658 2773 4.483711 CTGCAGACGATGAAGCGA 57.516 55.556 8.42 0.00 34.83 4.93
3068 3188 1.305219 ACGATGCCCGGTGAATTGTG 61.305 55.000 0.00 0.00 43.93 3.33
3069 3189 1.809207 GATGCCCGGTGAATTGTGG 59.191 57.895 0.00 0.00 0.00 4.17
3070 3190 0.679640 GATGCCCGGTGAATTGTGGA 60.680 55.000 0.00 0.00 0.00 4.02
3071 3191 0.965363 ATGCCCGGTGAATTGTGGAC 60.965 55.000 0.00 0.00 0.00 4.02
3072 3192 2.686816 GCCCGGTGAATTGTGGACG 61.687 63.158 0.00 0.00 0.00 4.79
3073 3193 1.302192 CCCGGTGAATTGTGGACGT 60.302 57.895 0.00 0.00 0.00 4.34
3074 3194 1.573829 CCCGGTGAATTGTGGACGTG 61.574 60.000 0.00 0.00 0.00 4.49
3075 3195 0.601576 CCGGTGAATTGTGGACGTGA 60.602 55.000 0.00 0.00 0.00 4.35
3076 3196 1.222300 CGGTGAATTGTGGACGTGAA 58.778 50.000 0.00 0.00 0.00 3.18
3077 3197 1.804151 CGGTGAATTGTGGACGTGAAT 59.196 47.619 0.00 0.00 0.00 2.57
3078 3198 2.225491 CGGTGAATTGTGGACGTGAATT 59.775 45.455 0.00 0.00 0.00 2.17
3079 3199 3.564511 GGTGAATTGTGGACGTGAATTG 58.435 45.455 0.00 0.00 0.00 2.32
3080 3200 3.004315 GGTGAATTGTGGACGTGAATTGT 59.996 43.478 0.00 0.00 0.00 2.71
3115 3245 3.333189 CGATCGCCATGCCGACAG 61.333 66.667 0.00 0.00 40.40 3.51
3202 3333 8.001881 AGATGTGTAGGAGTACAACTCATAAG 57.998 38.462 9.15 0.00 46.79 1.73
3203 3334 6.525578 TGTGTAGGAGTACAACTCATAAGG 57.474 41.667 9.15 0.00 46.79 2.69
3204 3335 5.105473 TGTGTAGGAGTACAACTCATAAGGC 60.105 44.000 9.15 1.89 46.79 4.35
3205 3336 4.404715 TGTAGGAGTACAACTCATAAGGCC 59.595 45.833 9.15 0.00 46.79 5.19
3206 3337 2.772515 AGGAGTACAACTCATAAGGCCC 59.227 50.000 0.00 0.00 46.79 5.80
3208 3339 3.432326 GGAGTACAACTCATAAGGCCCTG 60.432 52.174 0.00 0.00 46.79 4.45
3209 3340 3.182152 AGTACAACTCATAAGGCCCTGT 58.818 45.455 0.00 0.00 0.00 4.00
3210 3341 3.587506 AGTACAACTCATAAGGCCCTGTT 59.412 43.478 0.00 0.00 0.00 3.16
3211 3342 2.795329 ACAACTCATAAGGCCCTGTTG 58.205 47.619 0.00 8.83 40.11 3.33
3212 3343 2.094675 CAACTCATAAGGCCCTGTTGG 58.905 52.381 0.00 0.00 33.41 3.77
3225 3356 3.790089 CCTGTTGGGTTTCTAAGTCCT 57.210 47.619 0.00 0.00 0.00 3.85
3226 3357 4.903045 CCTGTTGGGTTTCTAAGTCCTA 57.097 45.455 0.00 0.00 0.00 2.94
3227 3358 4.833390 CCTGTTGGGTTTCTAAGTCCTAG 58.167 47.826 0.00 0.00 0.00 3.02
3228 3359 4.323562 CCTGTTGGGTTTCTAAGTCCTAGG 60.324 50.000 0.82 0.82 0.00 3.02
3229 3360 4.495565 TGTTGGGTTTCTAAGTCCTAGGA 58.504 43.478 7.62 7.62 0.00 2.94
3230 3361 5.098663 TGTTGGGTTTCTAAGTCCTAGGAT 58.901 41.667 16.27 1.82 0.00 3.24
3231 3362 5.550403 TGTTGGGTTTCTAAGTCCTAGGATT 59.450 40.000 16.27 8.10 0.00 3.01
3232 3363 6.045106 TGTTGGGTTTCTAAGTCCTAGGATTT 59.955 38.462 21.80 21.80 0.00 2.17
3233 3364 6.713731 TGGGTTTCTAAGTCCTAGGATTTT 57.286 37.500 23.08 18.00 0.00 1.82
3234 3365 7.098845 TGGGTTTCTAAGTCCTAGGATTTTT 57.901 36.000 23.08 15.78 0.00 1.94
3262 3393 8.296211 AGTCCTAACTTATAAGTCTCAAGTCC 57.704 38.462 18.28 6.84 38.57 3.85
3263 3394 7.342541 AGTCCTAACTTATAAGTCTCAAGTCCC 59.657 40.741 18.28 2.03 38.57 4.46
3264 3395 7.342541 GTCCTAACTTATAAGTCTCAAGTCCCT 59.657 40.741 18.28 1.87 38.57 4.20
3265 3396 8.563502 TCCTAACTTATAAGTCTCAAGTCCCTA 58.436 37.037 18.28 2.92 38.57 3.53
3266 3397 9.198475 CCTAACTTATAAGTCTCAAGTCCCTAA 57.802 37.037 18.28 0.00 38.57 2.69
3270 3401 9.945904 ACTTATAAGTCTCAAGTCCCTAAAAAG 57.054 33.333 12.50 0.00 32.86 2.27
3271 3402 9.945904 CTTATAAGTCTCAAGTCCCTAAAAAGT 57.054 33.333 4.18 0.00 0.00 2.66
3272 3403 9.939802 TTATAAGTCTCAAGTCCCTAAAAAGTC 57.060 33.333 0.00 0.00 0.00 3.01
3273 3404 5.230323 AGTCTCAAGTCCCTAAAAAGTCC 57.770 43.478 0.00 0.00 0.00 3.85
3274 3405 4.041815 AGTCTCAAGTCCCTAAAAAGTCCC 59.958 45.833 0.00 0.00 0.00 4.46
3275 3406 4.041815 GTCTCAAGTCCCTAAAAAGTCCCT 59.958 45.833 0.00 0.00 0.00 4.20
3276 3407 5.247792 GTCTCAAGTCCCTAAAAAGTCCCTA 59.752 44.000 0.00 0.00 0.00 3.53
3277 3408 5.247792 TCTCAAGTCCCTAAAAAGTCCCTAC 59.752 44.000 0.00 0.00 0.00 3.18
3278 3409 4.909088 TCAAGTCCCTAAAAAGTCCCTACA 59.091 41.667 0.00 0.00 0.00 2.74
3279 3410 5.550403 TCAAGTCCCTAAAAAGTCCCTACAT 59.450 40.000 0.00 0.00 0.00 2.29
3280 3411 5.437191 AGTCCCTAAAAAGTCCCTACATG 57.563 43.478 0.00 0.00 0.00 3.21
3281 3412 4.850386 AGTCCCTAAAAAGTCCCTACATGT 59.150 41.667 2.69 2.69 0.00 3.21
3282 3413 5.312443 AGTCCCTAAAAAGTCCCTACATGTT 59.688 40.000 2.30 0.00 0.00 2.71
3283 3414 6.008331 GTCCCTAAAAAGTCCCTACATGTTT 58.992 40.000 2.30 0.00 0.00 2.83
3284 3415 6.007703 TCCCTAAAAAGTCCCTACATGTTTG 58.992 40.000 2.30 0.00 0.00 2.93
3285 3416 5.185056 CCCTAAAAAGTCCCTACATGTTTGG 59.815 44.000 2.30 7.15 0.00 3.28
3286 3417 5.773176 CCTAAAAAGTCCCTACATGTTTGGT 59.227 40.000 2.30 0.00 0.00 3.67
3287 3418 6.266786 CCTAAAAAGTCCCTACATGTTTGGTT 59.733 38.462 2.30 0.00 0.00 3.67
3288 3419 5.784578 AAAAGTCCCTACATGTTTGGTTC 57.215 39.130 2.30 3.85 0.00 3.62
3289 3420 3.434940 AGTCCCTACATGTTTGGTTCC 57.565 47.619 2.30 0.00 0.00 3.62
3290 3421 2.986728 AGTCCCTACATGTTTGGTTCCT 59.013 45.455 2.30 1.09 0.00 3.36
3291 3422 3.081804 GTCCCTACATGTTTGGTTCCTG 58.918 50.000 2.30 0.00 0.00 3.86
3292 3423 2.983192 TCCCTACATGTTTGGTTCCTGA 59.017 45.455 2.30 0.00 0.00 3.86
3293 3424 3.396276 TCCCTACATGTTTGGTTCCTGAA 59.604 43.478 2.30 0.00 0.00 3.02
3294 3425 4.141135 TCCCTACATGTTTGGTTCCTGAAA 60.141 41.667 2.30 0.00 0.00 2.69
3295 3426 4.022329 CCCTACATGTTTGGTTCCTGAAAC 60.022 45.833 2.30 0.00 37.12 2.78
3296 3427 4.827284 CCTACATGTTTGGTTCCTGAAACT 59.173 41.667 2.30 0.00 38.02 2.66
3297 3428 5.301805 CCTACATGTTTGGTTCCTGAAACTT 59.698 40.000 2.30 0.00 38.02 2.66
3298 3429 6.488683 CCTACATGTTTGGTTCCTGAAACTTA 59.511 38.462 2.30 0.00 38.02 2.24
3299 3430 6.976934 ACATGTTTGGTTCCTGAAACTTAT 57.023 33.333 0.00 0.00 38.02 1.73
3300 3431 9.226606 CTACATGTTTGGTTCCTGAAACTTATA 57.773 33.333 2.30 0.00 38.02 0.98
3301 3432 8.472007 ACATGTTTGGTTCCTGAAACTTATAA 57.528 30.769 0.00 0.00 38.02 0.98
3302 3433 8.576442 ACATGTTTGGTTCCTGAAACTTATAAG 58.424 33.333 11.05 11.05 38.02 1.73
3303 3434 8.576442 CATGTTTGGTTCCTGAAACTTATAAGT 58.424 33.333 12.50 12.50 42.04 2.24
3336 3467 9.448587 AAGACCATATTACAACTATAAGTCCCT 57.551 33.333 0.00 0.00 0.00 4.20
3347 3478 9.939424 ACAACTATAAGTCCCTATAAGACTCTT 57.061 33.333 5.74 0.00 43.77 2.85
3353 3484 9.816787 ATAAGTCCCTATAAGACTCTTAAGGAG 57.183 37.037 19.00 10.94 43.77 3.69
3354 3485 7.468752 AGTCCCTATAAGACTCTTAAGGAGA 57.531 40.000 19.00 14.32 40.61 3.71
3380 3511 8.897752 AGTCTTATTTCATAAGTCTCAAATGCC 58.102 33.333 3.93 0.00 42.21 4.40
3381 3512 8.131731 GTCTTATTTCATAAGTCTCAAATGCCC 58.868 37.037 3.93 0.00 42.21 5.36
3382 3513 7.833682 TCTTATTTCATAAGTCTCAAATGCCCA 59.166 33.333 3.93 0.00 42.21 5.36
3383 3514 5.643379 TTTCATAAGTCTCAAATGCCCAC 57.357 39.130 0.00 0.00 0.00 4.61
3384 3515 4.574674 TCATAAGTCTCAAATGCCCACT 57.425 40.909 0.00 0.00 0.00 4.00
3385 3516 4.922206 TCATAAGTCTCAAATGCCCACTT 58.078 39.130 0.00 0.00 0.00 3.16
3386 3517 5.324409 TCATAAGTCTCAAATGCCCACTTT 58.676 37.500 0.00 0.00 0.00 2.66
3387 3518 6.480763 TCATAAGTCTCAAATGCCCACTTTA 58.519 36.000 0.00 0.00 0.00 1.85
3388 3519 6.945435 TCATAAGTCTCAAATGCCCACTTTAA 59.055 34.615 0.00 0.00 0.00 1.52
3389 3520 5.712152 AAGTCTCAAATGCCCACTTTAAG 57.288 39.130 0.00 0.00 0.00 1.85
3390 3521 4.729868 AGTCTCAAATGCCCACTTTAAGT 58.270 39.130 0.00 0.00 0.00 2.24
3391 3522 4.762251 AGTCTCAAATGCCCACTTTAAGTC 59.238 41.667 0.00 0.00 0.00 3.01
3392 3523 4.079253 TCTCAAATGCCCACTTTAAGTCC 58.921 43.478 0.00 0.00 0.00 3.85
3393 3524 3.161866 TCAAATGCCCACTTTAAGTCCC 58.838 45.455 0.00 0.00 0.00 4.46
3394 3525 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
3395 3526 4.043561 TCAAATGCCCACTTTAAGTCCCTA 59.956 41.667 0.00 0.00 0.00 3.53
3396 3527 4.881157 AATGCCCACTTTAAGTCCCTAT 57.119 40.909 0.00 0.00 0.00 2.57
3397 3528 5.987019 AATGCCCACTTTAAGTCCCTATA 57.013 39.130 0.00 0.00 0.00 1.31
3398 3529 5.987019 ATGCCCACTTTAAGTCCCTATAA 57.013 39.130 0.00 0.00 0.00 0.98
3399 3530 5.367945 TGCCCACTTTAAGTCCCTATAAG 57.632 43.478 0.00 0.00 0.00 1.73
3400 3531 4.786454 TGCCCACTTTAAGTCCCTATAAGT 59.214 41.667 0.00 0.00 0.00 2.24
3401 3532 5.104652 TGCCCACTTTAAGTCCCTATAAGTC 60.105 44.000 0.00 0.00 0.00 3.01
3402 3533 5.686913 GCCCACTTTAAGTCCCTATAAGTCC 60.687 48.000 0.00 0.00 0.00 3.85
3403 3534 5.163227 CCCACTTTAAGTCCCTATAAGTCCC 60.163 48.000 0.00 0.00 0.00 4.46
3404 3535 5.666265 CCACTTTAAGTCCCTATAAGTCCCT 59.334 44.000 0.00 0.00 0.00 4.20
3405 3536 6.183360 CCACTTTAAGTCCCTATAAGTCCCTC 60.183 46.154 0.00 0.00 0.00 4.30
3406 3537 5.904169 ACTTTAAGTCCCTATAAGTCCCTCC 59.096 44.000 0.00 0.00 0.00 4.30
3407 3538 5.763239 TTAAGTCCCTATAAGTCCCTCCT 57.237 43.478 0.00 0.00 0.00 3.69
3408 3539 3.621682 AGTCCCTATAAGTCCCTCCTG 57.378 52.381 0.00 0.00 0.00 3.86
3409 3540 2.866454 AGTCCCTATAAGTCCCTCCTGT 59.134 50.000 0.00 0.00 0.00 4.00
3410 3541 3.275228 AGTCCCTATAAGTCCCTCCTGTT 59.725 47.826 0.00 0.00 0.00 3.16
3411 3542 4.038633 GTCCCTATAAGTCCCTCCTGTTT 58.961 47.826 0.00 0.00 0.00 2.83
3412 3543 4.037927 TCCCTATAAGTCCCTCCTGTTTG 58.962 47.826 0.00 0.00 0.00 2.93
3413 3544 3.136626 CCCTATAAGTCCCTCCTGTTTGG 59.863 52.174 0.00 0.00 37.10 3.28
3414 3545 3.780850 CCTATAAGTCCCTCCTGTTTGGT 59.219 47.826 0.00 0.00 37.07 3.67
3415 3546 4.227527 CCTATAAGTCCCTCCTGTTTGGTT 59.772 45.833 0.00 0.00 37.07 3.67
3416 3547 4.741928 ATAAGTCCCTCCTGTTTGGTTT 57.258 40.909 0.00 0.00 37.07 3.27
3417 3548 5.853572 ATAAGTCCCTCCTGTTTGGTTTA 57.146 39.130 0.00 0.00 37.07 2.01
3418 3549 3.790089 AGTCCCTCCTGTTTGGTTTAG 57.210 47.619 0.00 0.00 37.07 1.85
3419 3550 3.323775 AGTCCCTCCTGTTTGGTTTAGA 58.676 45.455 0.00 0.00 37.07 2.10
3420 3551 3.916989 AGTCCCTCCTGTTTGGTTTAGAT 59.083 43.478 0.00 0.00 37.07 1.98
3421 3552 4.010349 GTCCCTCCTGTTTGGTTTAGATG 58.990 47.826 0.00 0.00 37.07 2.90
3422 3553 3.010138 TCCCTCCTGTTTGGTTTAGATGG 59.990 47.826 0.00 0.00 37.07 3.51
3423 3554 3.356290 CCTCCTGTTTGGTTTAGATGGG 58.644 50.000 0.00 0.00 37.07 4.00
3424 3555 3.010138 CCTCCTGTTTGGTTTAGATGGGA 59.990 47.826 0.00 0.00 37.07 4.37
3425 3556 4.010349 CTCCTGTTTGGTTTAGATGGGAC 58.990 47.826 0.00 0.00 37.07 4.46
3426 3557 3.655777 TCCTGTTTGGTTTAGATGGGACT 59.344 43.478 0.00 0.00 37.07 3.85
3427 3558 4.105697 TCCTGTTTGGTTTAGATGGGACTT 59.894 41.667 0.00 0.00 37.07 3.01
3428 3559 5.311121 TCCTGTTTGGTTTAGATGGGACTTA 59.689 40.000 0.00 0.00 37.07 2.24
3429 3560 6.011981 TCCTGTTTGGTTTAGATGGGACTTAT 60.012 38.462 0.00 0.00 37.07 1.73
3430 3561 7.183112 TCCTGTTTGGTTTAGATGGGACTTATA 59.817 37.037 0.00 0.00 37.07 0.98
3431 3562 7.499232 CCTGTTTGGTTTAGATGGGACTTATAG 59.501 40.741 0.00 0.00 0.00 1.31
3432 3563 7.343357 TGTTTGGTTTAGATGGGACTTATAGG 58.657 38.462 0.00 0.00 0.00 2.57
3433 3564 6.509523 TTGGTTTAGATGGGACTTATAGGG 57.490 41.667 0.00 0.00 0.00 3.53
3434 3565 5.795079 TGGTTTAGATGGGACTTATAGGGA 58.205 41.667 0.00 0.00 0.00 4.20
3435 3566 5.605488 TGGTTTAGATGGGACTTATAGGGAC 59.395 44.000 0.00 0.00 0.00 4.46
3436 3567 5.845065 GGTTTAGATGGGACTTATAGGGACT 59.155 44.000 0.00 0.00 46.37 3.85
3437 3568 6.329460 GGTTTAGATGGGACTTATAGGGACTT 59.671 42.308 0.00 0.00 41.75 3.01
3438 3569 7.147355 GGTTTAGATGGGACTTATAGGGACTTT 60.147 40.741 0.00 0.00 41.75 2.66
3439 3570 8.272889 GTTTAGATGGGACTTATAGGGACTTTT 58.727 37.037 0.00 0.00 41.75 2.27
3440 3571 6.910259 AGATGGGACTTATAGGGACTTTTT 57.090 37.500 0.00 0.00 41.75 1.94
3463 3594 9.643735 TTTTTAAGTCCCTAAACCAATAAGTCA 57.356 29.630 0.00 0.00 0.00 3.41
3464 3595 8.625786 TTTAAGTCCCTAAACCAATAAGTCAC 57.374 34.615 0.00 0.00 0.00 3.67
3465 3596 4.828829 AGTCCCTAAACCAATAAGTCACG 58.171 43.478 0.00 0.00 0.00 4.35
3466 3597 3.937079 GTCCCTAAACCAATAAGTCACGG 59.063 47.826 0.00 0.00 0.00 4.94
3467 3598 3.054948 TCCCTAAACCAATAAGTCACGGG 60.055 47.826 0.00 0.00 0.00 5.28
3468 3599 3.054948 CCCTAAACCAATAAGTCACGGGA 60.055 47.826 0.00 0.00 0.00 5.14
3469 3600 4.566070 CCCTAAACCAATAAGTCACGGGAA 60.566 45.833 0.00 0.00 0.00 3.97
3470 3601 5.005094 CCTAAACCAATAAGTCACGGGAAA 58.995 41.667 0.00 0.00 0.00 3.13
3471 3602 4.841443 AAACCAATAAGTCACGGGAAAC 57.159 40.909 0.00 0.00 0.00 2.78
3472 3603 3.495434 ACCAATAAGTCACGGGAAACA 57.505 42.857 0.00 0.00 0.00 2.83
3473 3604 3.822940 ACCAATAAGTCACGGGAAACAA 58.177 40.909 0.00 0.00 0.00 2.83
3474 3605 4.208746 ACCAATAAGTCACGGGAAACAAA 58.791 39.130 0.00 0.00 0.00 2.83
3475 3606 4.037089 ACCAATAAGTCACGGGAAACAAAC 59.963 41.667 0.00 0.00 0.00 2.93
3476 3607 4.036971 CCAATAAGTCACGGGAAACAAACA 59.963 41.667 0.00 0.00 0.00 2.83
3477 3608 5.278758 CCAATAAGTCACGGGAAACAAACAT 60.279 40.000 0.00 0.00 0.00 2.71
3478 3609 3.982576 AAGTCACGGGAAACAAACATC 57.017 42.857 0.00 0.00 0.00 3.06
3479 3610 2.227194 AGTCACGGGAAACAAACATCC 58.773 47.619 0.00 0.00 34.85 3.51
3480 3611 2.158667 AGTCACGGGAAACAAACATCCT 60.159 45.455 0.00 0.00 35.95 3.24
3481 3612 2.225727 GTCACGGGAAACAAACATCCTC 59.774 50.000 0.00 0.00 35.95 3.71
3482 3613 2.105821 TCACGGGAAACAAACATCCTCT 59.894 45.455 0.00 0.00 35.95 3.69
3483 3614 2.884639 CACGGGAAACAAACATCCTCTT 59.115 45.455 0.00 0.00 35.95 2.85
3484 3615 4.069304 CACGGGAAACAAACATCCTCTTA 58.931 43.478 0.00 0.00 35.95 2.10
3485 3616 4.517453 CACGGGAAACAAACATCCTCTTAA 59.483 41.667 0.00 0.00 35.95 1.85
3486 3617 5.183140 CACGGGAAACAAACATCCTCTTAAT 59.817 40.000 0.00 0.00 35.95 1.40
3487 3618 5.773176 ACGGGAAACAAACATCCTCTTAATT 59.227 36.000 0.00 0.00 35.95 1.40
3488 3619 6.092748 CGGGAAACAAACATCCTCTTAATTG 58.907 40.000 0.00 0.00 35.95 2.32
3587 3722 8.071368 GTGGAAGTACTAGATTCGTAGAATGAG 58.929 40.741 0.00 0.88 45.90 2.90
3595 3730 8.908903 ACTAGATTCGTAGAATGAGATGAAACT 58.091 33.333 0.00 0.00 45.90 2.66
3624 4019 5.212194 TCTTTTGACGCAGAAAAAGTATGC 58.788 37.500 12.04 0.00 41.60 3.14
3649 4044 5.978934 TTGTCTCTCAAGTTTACCGAAAC 57.021 39.130 0.00 0.00 44.56 2.78
3678 4411 8.997621 ATATTTGAACTTTAGTTGACGCTAGA 57.002 30.769 0.00 0.00 38.56 2.43
3679 4412 6.764877 TTTGAACTTTAGTTGACGCTAGAG 57.235 37.500 0.00 0.00 38.56 2.43
3681 4414 4.521639 TGAACTTTAGTTGACGCTAGAGGA 59.478 41.667 0.00 0.00 38.56 3.71
3685 4418 4.436242 TTAGTTGACGCTAGAGGACAAG 57.564 45.455 0.00 0.00 0.00 3.16
3693 4426 4.557205 ACGCTAGAGGACAAGTTTAGTTG 58.443 43.478 0.00 0.00 0.00 3.16
3701 4434 7.993101 AGAGGACAAGTTTAGTTGTTAAAACC 58.007 34.615 4.57 1.77 40.83 3.27
3706 4439 8.113173 ACAAGTTTAGTTGTTAAAACCTGACA 57.887 30.769 4.14 0.00 37.36 3.58
3714 4447 7.646446 GTTGTTAAAACCTGACAACTTTGTT 57.354 32.000 10.39 0.00 45.85 2.83
3721 4454 5.262588 ACCTGACAACTTTGTTCCATTTC 57.737 39.130 0.00 0.00 42.43 2.17
3722 4455 4.709397 ACCTGACAACTTTGTTCCATTTCA 59.291 37.500 0.00 0.00 42.43 2.69
3723 4456 5.163519 ACCTGACAACTTTGTTCCATTTCAG 60.164 40.000 0.00 0.00 42.43 3.02
3751 4485 8.545229 TTTTGTCAGAAAATTGTCATGTTTGT 57.455 26.923 0.00 0.00 0.00 2.83
3755 4489 7.275341 TGTCAGAAAATTGTCATGTTTGTCAAC 59.725 33.333 0.00 0.00 34.49 3.18
3766 4500 1.263217 GTTTGTCAACCTCGCGTGAAT 59.737 47.619 10.21 0.00 0.00 2.57
3810 4544 8.921670 ACGTTCAAATTACCATGCTTAAAAATC 58.078 29.630 0.00 0.00 0.00 2.17
3820 4554 6.368516 ACCATGCTTAAAAATCCAAATGTTCG 59.631 34.615 0.00 0.00 0.00 3.95
3839 4573 5.756347 TGTTCGGGATTTATCATTTCCGTAG 59.244 40.000 0.00 0.00 38.70 3.51
3845 4579 7.654520 CGGGATTTATCATTTCCGTAGAAGTTA 59.345 37.037 0.00 0.00 32.35 2.24
3874 6153 4.807834 CACAATTAGTCGCTCATGTCTCAT 59.192 41.667 0.00 0.00 0.00 2.90
3922 6202 4.728772 TCACATCAGATTGGAAAACTGGT 58.271 39.130 0.00 0.00 45.60 4.00
3926 6206 4.163441 TCAGATTGGAAAACTGGTCACA 57.837 40.909 0.00 0.00 45.60 3.58
3952 6232 3.125316 CCACTTAAAATGACGTGAGCCTC 59.875 47.826 0.00 0.00 0.00 4.70
3982 6262 1.742308 TGCTTACCCCTTCACCTCTT 58.258 50.000 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.241804 CGAGAAAGTCATCGTGCTAAAGC 60.242 47.826 0.00 0.00 42.50 3.51
9 10 4.030753 GTCGAGAAAGTCATCGTGCTAAAG 59.969 45.833 0.00 0.00 39.86 1.85
27 28 8.861101 CAAACCTTGTTATAGTAGAAAGTCGAG 58.139 37.037 0.00 0.00 0.00 4.04
32 33 8.184192 CCATGCAAACCTTGTTATAGTAGAAAG 58.816 37.037 0.00 0.00 0.00 2.62
45 46 0.245539 CAGGAGCCATGCAAACCTTG 59.754 55.000 0.00 0.00 30.02 3.61
79 80 2.506217 GAAGGCGCGTCGTCATCA 60.506 61.111 21.59 0.00 32.13 3.07
98 99 1.602377 ACTACAAACACCGAAGCAAGC 59.398 47.619 0.00 0.00 0.00 4.01
221 225 7.308782 ACTTACGATCCAAGCTTCAATTTAG 57.691 36.000 0.00 0.00 0.00 1.85
226 230 6.385649 AAAAACTTACGATCCAAGCTTCAA 57.614 33.333 0.00 0.00 0.00 2.69
253 258 4.150980 CAGTACGAAACTACAAATGCGGAA 59.849 41.667 0.00 0.00 35.76 4.30
254 259 3.676172 CAGTACGAAACTACAAATGCGGA 59.324 43.478 0.00 0.00 35.76 5.54
255 260 3.430895 ACAGTACGAAACTACAAATGCGG 59.569 43.478 0.00 0.00 35.76 5.69
256 261 4.084745 ACACAGTACGAAACTACAAATGCG 60.085 41.667 0.00 0.00 35.76 4.73
270 275 5.289917 TGCCAATTAATTGACACAGTACG 57.710 39.130 26.32 9.66 40.14 3.67
280 289 3.055963 TGGTCCTGCTTGCCAATTAATTG 60.056 43.478 19.40 19.40 37.52 2.32
330 339 1.405821 GATGAGATTCCCGTGTCGACT 59.594 52.381 17.92 0.00 0.00 4.18
417 426 2.806244 ACGCCAACTTAAGCAAGTACAG 59.194 45.455 1.29 0.00 44.41 2.74
418 427 2.546368 CACGCCAACTTAAGCAAGTACA 59.454 45.455 1.29 0.00 44.41 2.90
419 428 2.664698 GCACGCCAACTTAAGCAAGTAC 60.665 50.000 1.29 0.00 44.41 2.73
420 429 1.533731 GCACGCCAACTTAAGCAAGTA 59.466 47.619 1.29 0.00 44.41 2.24
445 454 1.154205 AGAGTCAAGTGTGCACGCAC 61.154 55.000 30.53 20.12 46.33 5.34
470 479 1.589993 CGTGATCCAGCAGCTACGG 60.590 63.158 6.75 0.00 0.00 4.02
502 511 1.153289 GCATGAGTGGCTCCGACAT 60.153 57.895 0.00 0.00 0.00 3.06
527 536 2.688446 GCTGGGGTTGCTTATTAAGACC 59.312 50.000 7.63 6.68 0.00 3.85
545 554 0.448990 TGGTAGTACGTACTGCGCTG 59.551 55.000 33.23 13.23 46.11 5.18
546 555 0.449388 GTGGTAGTACGTACTGCGCT 59.551 55.000 33.23 13.34 46.11 5.92
547 556 0.858961 CGTGGTAGTACGTACTGCGC 60.859 60.000 33.23 25.28 46.11 6.09
550 559 2.472886 CGTGTCGTGGTAGTACGTACTG 60.473 54.545 33.23 18.75 44.06 2.74
566 575 0.306840 TCACACTCGACTCACGTGTC 59.693 55.000 16.51 5.73 44.87 3.67
587 598 2.183555 CCGGGGAACAGTACGAGC 59.816 66.667 0.00 0.00 0.00 5.03
831 859 2.989840 CTGTCTTTAGACTTCCACGCAG 59.010 50.000 10.92 0.00 44.99 5.18
850 900 3.393800 AGTCGTCCTTGTGAATGTTCTG 58.606 45.455 0.00 0.00 0.00 3.02
871 928 1.880894 CAGCTTGGTCGGTCGTCTA 59.119 57.895 0.00 0.00 0.00 2.59
994 1088 2.788176 CTGTGGTGCGCATCGTACG 61.788 63.158 15.91 9.53 42.91 3.67
1042 1136 1.672356 GCAGGAAGAAGCAGGCGAA 60.672 57.895 0.00 0.00 0.00 4.70
1368 1471 2.016171 GAGGTAGACGGTCTCGAGC 58.984 63.158 15.05 7.95 40.11 5.03
1443 1546 2.184167 GGAGAGGTCGAGCTCGGAG 61.184 68.421 33.98 8.59 40.29 4.63
1545 1648 2.107141 GGAATCGCTCCGGTGAGG 59.893 66.667 7.92 0.00 39.14 3.86
1572 1675 2.888534 CACGTATCGTTGGGCCCG 60.889 66.667 19.37 5.22 38.32 6.13
1755 1858 4.022242 CCGGAGAAGTTGTTGTAAGAGAGA 60.022 45.833 0.00 0.00 0.00 3.10
1947 2050 2.994995 ATGGACACCGACGCCAGA 60.995 61.111 0.00 0.00 34.74 3.86
2046 2161 1.456287 GAACACCACCAGCTTCCCT 59.544 57.895 0.00 0.00 0.00 4.20
2073 2188 2.917227 TCCAGCGTCAGGTGCTCA 60.917 61.111 0.00 0.00 41.72 4.26
2539 2654 0.663568 GCGTATTCGGTCATCCTCGG 60.664 60.000 0.00 0.00 37.56 4.63
2545 2660 0.108520 ACAACGGCGTATTCGGTCAT 60.109 50.000 15.20 0.00 37.56 3.06
3038 3153 1.003866 CGGGCATCGTAAAAGCTAAGC 60.004 52.381 0.00 0.00 0.00 3.09
3039 3154 1.597663 CCGGGCATCGTAAAAGCTAAG 59.402 52.381 0.00 0.00 37.11 2.18
3040 3155 1.065998 ACCGGGCATCGTAAAAGCTAA 60.066 47.619 6.32 0.00 37.11 3.09
3069 3189 2.419673 TGCATCATGGACAATTCACGTC 59.580 45.455 0.00 0.00 0.00 4.34
3070 3190 2.435422 TGCATCATGGACAATTCACGT 58.565 42.857 0.00 0.00 0.00 4.49
3071 3191 3.368495 CATGCATCATGGACAATTCACG 58.632 45.455 0.00 0.00 38.11 4.35
3072 3192 3.120792 GCATGCATCATGGACAATTCAC 58.879 45.455 14.21 0.00 41.64 3.18
3073 3193 3.028130 AGCATGCATCATGGACAATTCA 58.972 40.909 21.98 0.00 41.64 2.57
3074 3194 3.381045 CAGCATGCATCATGGACAATTC 58.619 45.455 21.98 0.00 41.64 2.17
3075 3195 2.102420 CCAGCATGCATCATGGACAATT 59.898 45.455 21.98 0.00 41.64 2.32
3076 3196 1.686587 CCAGCATGCATCATGGACAAT 59.313 47.619 21.98 0.00 41.64 2.71
3077 3197 1.107945 CCAGCATGCATCATGGACAA 58.892 50.000 21.98 0.00 41.64 3.18
3078 3198 0.033894 ACCAGCATGCATCATGGACA 60.034 50.000 25.70 0.00 41.64 4.02
3079 3199 0.666913 GACCAGCATGCATCATGGAC 59.333 55.000 25.70 17.69 41.64 4.02
3080 3200 0.816421 CGACCAGCATGCATCATGGA 60.816 55.000 25.70 0.00 41.64 3.41
3115 3245 2.738314 GCAGAAACAAACCCATCAATGC 59.262 45.455 0.00 0.00 0.00 3.56
3205 3336 3.790089 AGGACTTAGAAACCCAACAGG 57.210 47.619 0.00 0.00 43.78 4.00
3206 3337 4.530946 TCCTAGGACTTAGAAACCCAACAG 59.469 45.833 7.62 0.00 0.00 3.16
3208 3339 5.695424 ATCCTAGGACTTAGAAACCCAAC 57.305 43.478 15.42 0.00 0.00 3.77
3209 3340 6.713731 AAATCCTAGGACTTAGAAACCCAA 57.286 37.500 15.42 0.00 0.00 4.12
3210 3341 6.713731 AAAATCCTAGGACTTAGAAACCCA 57.286 37.500 15.42 0.00 0.00 4.51
3236 3367 9.406113 GGACTTGAGACTTATAAGTTAGGACTA 57.594 37.037 18.96 6.16 39.88 2.59
3237 3368 7.342541 GGGACTTGAGACTTATAAGTTAGGACT 59.657 40.741 18.96 10.98 39.88 3.85
3238 3369 7.342541 AGGGACTTGAGACTTATAAGTTAGGAC 59.657 40.741 18.96 6.39 34.84 3.85
3239 3370 7.420029 AGGGACTTGAGACTTATAAGTTAGGA 58.580 38.462 18.96 6.15 34.84 2.94
3240 3371 7.663043 AGGGACTTGAGACTTATAAGTTAGG 57.337 40.000 18.96 11.42 34.84 2.69
3244 3375 9.945904 CTTTTTAGGGACTTGAGACTTATAAGT 57.054 33.333 18.05 18.05 40.66 2.24
3245 3376 9.945904 ACTTTTTAGGGACTTGAGACTTATAAG 57.054 33.333 11.05 11.05 41.75 1.73
3246 3377 9.939802 GACTTTTTAGGGACTTGAGACTTATAA 57.060 33.333 0.00 0.00 41.75 0.98
3247 3378 8.537858 GGACTTTTTAGGGACTTGAGACTTATA 58.462 37.037 0.00 0.00 41.75 0.98
3248 3379 7.395617 GGACTTTTTAGGGACTTGAGACTTAT 58.604 38.462 0.00 0.00 41.75 1.73
3249 3380 6.239800 GGGACTTTTTAGGGACTTGAGACTTA 60.240 42.308 0.00 0.00 41.75 2.24
3250 3381 5.456330 GGGACTTTTTAGGGACTTGAGACTT 60.456 44.000 0.00 0.00 41.75 3.01
3251 3382 4.041815 GGGACTTTTTAGGGACTTGAGACT 59.958 45.833 0.00 0.00 41.75 3.24
3252 3383 4.041815 AGGGACTTTTTAGGGACTTGAGAC 59.958 45.833 0.00 0.00 34.75 3.36
3253 3384 4.240323 AGGGACTTTTTAGGGACTTGAGA 58.760 43.478 0.00 0.00 34.75 3.27
3254 3385 4.642466 AGGGACTTTTTAGGGACTTGAG 57.358 45.455 0.00 0.00 34.75 3.02
3255 3386 4.909088 TGTAGGGACTTTTTAGGGACTTGA 59.091 41.667 0.00 0.00 39.49 3.02
3256 3387 5.237236 TGTAGGGACTTTTTAGGGACTTG 57.763 43.478 0.00 0.00 39.49 3.16
3257 3388 5.312443 ACATGTAGGGACTTTTTAGGGACTT 59.688 40.000 0.00 0.00 39.49 3.01
3258 3389 4.850386 ACATGTAGGGACTTTTTAGGGACT 59.150 41.667 0.00 0.00 41.75 3.85
3259 3390 5.175388 ACATGTAGGGACTTTTTAGGGAC 57.825 43.478 0.00 0.00 41.75 4.46
3260 3391 5.853572 AACATGTAGGGACTTTTTAGGGA 57.146 39.130 0.00 0.00 41.75 4.20
3261 3392 5.185056 CCAAACATGTAGGGACTTTTTAGGG 59.815 44.000 9.55 0.00 41.75 3.53
3262 3393 5.773176 ACCAAACATGTAGGGACTTTTTAGG 59.227 40.000 19.48 5.71 41.75 2.69
3263 3394 6.894339 ACCAAACATGTAGGGACTTTTTAG 57.106 37.500 19.48 0.00 41.75 1.85
3264 3395 6.265876 GGAACCAAACATGTAGGGACTTTTTA 59.734 38.462 19.48 0.00 41.75 1.52
3265 3396 5.069914 GGAACCAAACATGTAGGGACTTTTT 59.930 40.000 19.48 5.69 41.75 1.94
3266 3397 4.587262 GGAACCAAACATGTAGGGACTTTT 59.413 41.667 19.48 6.31 41.75 2.27
3267 3398 4.141018 AGGAACCAAACATGTAGGGACTTT 60.141 41.667 19.48 6.62 41.75 2.66
3268 3399 3.397955 AGGAACCAAACATGTAGGGACTT 59.602 43.478 19.48 6.91 41.75 3.01
3269 3400 2.986728 AGGAACCAAACATGTAGGGACT 59.013 45.455 19.48 11.76 46.37 3.85
3270 3401 3.081804 CAGGAACCAAACATGTAGGGAC 58.918 50.000 19.48 12.61 0.00 4.46
3271 3402 2.983192 TCAGGAACCAAACATGTAGGGA 59.017 45.455 19.48 6.04 0.00 4.20
3272 3403 3.433306 TCAGGAACCAAACATGTAGGG 57.567 47.619 18.43 15.73 0.00 3.53
3273 3404 4.827284 AGTTTCAGGAACCAAACATGTAGG 59.173 41.667 14.04 14.04 39.13 3.18
3274 3405 6.391227 AAGTTTCAGGAACCAAACATGTAG 57.609 37.500 0.00 0.00 39.13 2.74
3275 3406 9.575868 TTATAAGTTTCAGGAACCAAACATGTA 57.424 29.630 0.00 0.00 39.13 2.29
3276 3407 6.976934 ATAAGTTTCAGGAACCAAACATGT 57.023 33.333 0.00 0.00 39.13 3.21
3277 3408 8.576442 ACTTATAAGTTTCAGGAACCAAACATG 58.424 33.333 12.50 0.00 39.13 3.21
3278 3409 8.706322 ACTTATAAGTTTCAGGAACCAAACAT 57.294 30.769 12.50 1.59 39.13 2.71
3279 3410 8.528044 AACTTATAAGTTTCAGGAACCAAACA 57.472 30.769 22.49 0.00 46.52 2.83
3310 3441 9.448587 AGGGACTTATAGTTGTAATATGGTCTT 57.551 33.333 0.00 0.00 27.25 3.01
3321 3452 9.939424 AAGAGTCTTATAGGGACTTATAGTTGT 57.061 33.333 2.75 0.00 43.13 3.32
3327 3458 9.816787 CTCCTTAAGAGTCTTATAGGGACTTAT 57.183 37.037 25.20 6.72 43.13 1.73
3328 3459 9.011860 TCTCCTTAAGAGTCTTATAGGGACTTA 57.988 37.037 25.20 14.14 43.13 2.24
3329 3460 7.884891 TCTCCTTAAGAGTCTTATAGGGACTT 58.115 38.462 25.20 0.00 43.13 3.01
3330 3461 7.468752 TCTCCTTAAGAGTCTTATAGGGACT 57.531 40.000 25.20 9.30 45.37 3.85
3331 3462 7.754851 CTCTCCTTAAGAGTCTTATAGGGAC 57.245 44.000 25.20 0.00 45.61 4.46
3358 3489 7.615365 AGTGGGCATTTGAGACTTATGAAATAA 59.385 33.333 0.00 0.00 36.20 1.40
3359 3490 7.118723 AGTGGGCATTTGAGACTTATGAAATA 58.881 34.615 0.00 0.00 0.00 1.40
3360 3491 5.954150 AGTGGGCATTTGAGACTTATGAAAT 59.046 36.000 0.00 0.00 0.00 2.17
3361 3492 5.324409 AGTGGGCATTTGAGACTTATGAAA 58.676 37.500 0.00 0.00 0.00 2.69
3362 3493 4.922206 AGTGGGCATTTGAGACTTATGAA 58.078 39.130 0.00 0.00 0.00 2.57
3363 3494 4.574674 AGTGGGCATTTGAGACTTATGA 57.425 40.909 0.00 0.00 0.00 2.15
3364 3495 5.649782 AAAGTGGGCATTTGAGACTTATG 57.350 39.130 0.00 0.00 0.00 1.90
3365 3496 6.948309 ACTTAAAGTGGGCATTTGAGACTTAT 59.052 34.615 7.52 0.00 30.26 1.73
3366 3497 6.303839 ACTTAAAGTGGGCATTTGAGACTTA 58.696 36.000 7.52 0.00 30.26 2.24
3367 3498 5.140454 ACTTAAAGTGGGCATTTGAGACTT 58.860 37.500 7.52 0.00 30.26 3.01
3368 3499 4.729868 ACTTAAAGTGGGCATTTGAGACT 58.270 39.130 7.52 0.00 30.26 3.24
3369 3500 4.082733 GGACTTAAAGTGGGCATTTGAGAC 60.083 45.833 7.52 2.89 30.26 3.36
3370 3501 4.079253 GGACTTAAAGTGGGCATTTGAGA 58.921 43.478 7.52 0.00 30.26 3.27
3371 3502 3.193479 GGGACTTAAAGTGGGCATTTGAG 59.807 47.826 0.00 0.00 31.53 3.02
3372 3503 3.161866 GGGACTTAAAGTGGGCATTTGA 58.838 45.455 0.00 0.00 0.00 2.69
3373 3504 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
3374 3505 3.542969 AGGGACTTAAAGTGGGCATTT 57.457 42.857 0.00 0.00 27.25 2.32
3375 3506 4.881157 ATAGGGACTTAAAGTGGGCATT 57.119 40.909 0.00 0.00 41.75 3.56
3376 3507 5.432060 ACTTATAGGGACTTAAAGTGGGCAT 59.568 40.000 0.00 0.00 39.58 4.40
3377 3508 4.786454 ACTTATAGGGACTTAAAGTGGGCA 59.214 41.667 0.00 0.00 39.58 5.36
3378 3509 5.366460 GACTTATAGGGACTTAAAGTGGGC 58.634 45.833 0.00 0.00 40.60 5.36
3379 3510 5.163227 GGGACTTATAGGGACTTAAAGTGGG 60.163 48.000 0.00 0.00 40.60 4.61
3380 3511 5.666265 AGGGACTTATAGGGACTTAAAGTGG 59.334 44.000 0.00 0.00 40.60 4.00
3381 3512 6.183360 GGAGGGACTTATAGGGACTTAAAGTG 60.183 46.154 0.00 0.00 40.60 3.16
3382 3513 5.904169 GGAGGGACTTATAGGGACTTAAAGT 59.096 44.000 0.00 0.00 42.31 2.66
3383 3514 6.042208 CAGGAGGGACTTATAGGGACTTAAAG 59.958 46.154 0.00 0.00 41.55 1.85
3384 3515 5.903589 CAGGAGGGACTTATAGGGACTTAAA 59.096 44.000 0.00 0.00 41.55 1.52
3385 3516 5.042827 ACAGGAGGGACTTATAGGGACTTAA 60.043 44.000 0.00 0.00 41.55 1.85
3386 3517 4.485021 ACAGGAGGGACTTATAGGGACTTA 59.515 45.833 0.00 0.00 41.55 2.24
3387 3518 3.275228 ACAGGAGGGACTTATAGGGACTT 59.725 47.826 0.00 0.00 41.55 3.01
3388 3519 2.866454 ACAGGAGGGACTTATAGGGACT 59.134 50.000 0.00 0.00 41.55 3.85
3389 3520 3.331718 ACAGGAGGGACTTATAGGGAC 57.668 52.381 0.00 0.00 41.55 4.46
3390 3521 4.037927 CAAACAGGAGGGACTTATAGGGA 58.962 47.826 0.00 0.00 41.55 4.20
3391 3522 3.136626 CCAAACAGGAGGGACTTATAGGG 59.863 52.174 0.00 0.00 41.55 3.53
3392 3523 3.780850 ACCAAACAGGAGGGACTTATAGG 59.219 47.826 0.00 0.00 41.55 2.57
3393 3524 5.437191 AACCAAACAGGAGGGACTTATAG 57.563 43.478 0.00 0.00 41.55 1.31
3394 3525 5.853572 AAACCAAACAGGAGGGACTTATA 57.146 39.130 0.00 0.00 41.55 0.98
3395 3526 4.741928 AAACCAAACAGGAGGGACTTAT 57.258 40.909 0.00 0.00 41.55 1.73
3396 3527 4.909088 TCTAAACCAAACAGGAGGGACTTA 59.091 41.667 0.00 0.00 41.55 2.24
3397 3528 3.720002 TCTAAACCAAACAGGAGGGACTT 59.280 43.478 0.00 0.00 41.55 3.01
3399 3530 3.782656 TCTAAACCAAACAGGAGGGAC 57.217 47.619 0.00 0.00 41.22 4.46
3400 3531 3.010138 CCATCTAAACCAAACAGGAGGGA 59.990 47.826 0.00 0.00 41.22 4.20
3401 3532 3.356290 CCATCTAAACCAAACAGGAGGG 58.644 50.000 0.00 0.00 41.22 4.30
3402 3533 3.010138 TCCCATCTAAACCAAACAGGAGG 59.990 47.826 0.00 0.00 41.22 4.30
3403 3534 4.010349 GTCCCATCTAAACCAAACAGGAG 58.990 47.826 0.00 0.00 41.22 3.69
3404 3535 3.655777 AGTCCCATCTAAACCAAACAGGA 59.344 43.478 0.00 0.00 41.22 3.86
3405 3536 4.034285 AGTCCCATCTAAACCAAACAGG 57.966 45.455 0.00 0.00 45.67 4.00
3406 3537 7.499232 CCTATAAGTCCCATCTAAACCAAACAG 59.501 40.741 0.00 0.00 0.00 3.16
3407 3538 7.343357 CCTATAAGTCCCATCTAAACCAAACA 58.657 38.462 0.00 0.00 0.00 2.83
3408 3539 6.771267 CCCTATAAGTCCCATCTAAACCAAAC 59.229 42.308 0.00 0.00 0.00 2.93
3409 3540 6.679303 TCCCTATAAGTCCCATCTAAACCAAA 59.321 38.462 0.00 0.00 0.00 3.28
3410 3541 6.100714 GTCCCTATAAGTCCCATCTAAACCAA 59.899 42.308 0.00 0.00 0.00 3.67
3411 3542 5.605488 GTCCCTATAAGTCCCATCTAAACCA 59.395 44.000 0.00 0.00 0.00 3.67
3412 3543 5.845065 AGTCCCTATAAGTCCCATCTAAACC 59.155 44.000 0.00 0.00 0.00 3.27
3413 3544 6.997942 AGTCCCTATAAGTCCCATCTAAAC 57.002 41.667 0.00 0.00 0.00 2.01
3414 3545 8.401955 AAAAGTCCCTATAAGTCCCATCTAAA 57.598 34.615 0.00 0.00 0.00 1.85
3415 3546 8.401955 AAAAAGTCCCTATAAGTCCCATCTAA 57.598 34.615 0.00 0.00 0.00 2.10
3417 3548 6.910259 AAAAAGTCCCTATAAGTCCCATCT 57.090 37.500 0.00 0.00 0.00 2.90
3437 3568 9.643735 TGACTTATTGGTTTAGGGACTTAAAAA 57.356 29.630 0.00 0.00 41.75 1.94
3438 3569 9.070179 GTGACTTATTGGTTTAGGGACTTAAAA 57.930 33.333 0.00 0.00 41.75 1.52
3439 3570 7.388500 CGTGACTTATTGGTTTAGGGACTTAAA 59.612 37.037 0.00 0.00 41.75 1.52
3440 3571 6.875195 CGTGACTTATTGGTTTAGGGACTTAA 59.125 38.462 0.00 0.00 41.75 1.85
3441 3572 6.400568 CGTGACTTATTGGTTTAGGGACTTA 58.599 40.000 0.00 0.00 41.75 2.24
3442 3573 5.243207 CGTGACTTATTGGTTTAGGGACTT 58.757 41.667 0.00 0.00 41.75 3.01
3443 3574 4.323257 CCGTGACTTATTGGTTTAGGGACT 60.323 45.833 0.00 0.00 46.37 3.85
3444 3575 3.937079 CCGTGACTTATTGGTTTAGGGAC 59.063 47.826 0.00 0.00 0.00 4.46
3445 3576 3.054948 CCCGTGACTTATTGGTTTAGGGA 60.055 47.826 0.00 0.00 37.37 4.20
3446 3577 3.054948 TCCCGTGACTTATTGGTTTAGGG 60.055 47.826 0.00 0.00 36.57 3.53
3447 3578 4.210724 TCCCGTGACTTATTGGTTTAGG 57.789 45.455 0.00 0.00 0.00 2.69
3448 3579 5.470777 TGTTTCCCGTGACTTATTGGTTTAG 59.529 40.000 0.00 0.00 0.00 1.85
3449 3580 5.374921 TGTTTCCCGTGACTTATTGGTTTA 58.625 37.500 0.00 0.00 0.00 2.01
3450 3581 4.208746 TGTTTCCCGTGACTTATTGGTTT 58.791 39.130 0.00 0.00 0.00 3.27
3451 3582 3.822940 TGTTTCCCGTGACTTATTGGTT 58.177 40.909 0.00 0.00 0.00 3.67
3452 3583 3.495434 TGTTTCCCGTGACTTATTGGT 57.505 42.857 0.00 0.00 0.00 3.67
3453 3584 4.036971 TGTTTGTTTCCCGTGACTTATTGG 59.963 41.667 0.00 0.00 0.00 3.16
3454 3585 5.176407 TGTTTGTTTCCCGTGACTTATTG 57.824 39.130 0.00 0.00 0.00 1.90
3455 3586 5.048294 GGATGTTTGTTTCCCGTGACTTATT 60.048 40.000 0.00 0.00 0.00 1.40
3456 3587 4.457949 GGATGTTTGTTTCCCGTGACTTAT 59.542 41.667 0.00 0.00 0.00 1.73
3457 3588 3.816523 GGATGTTTGTTTCCCGTGACTTA 59.183 43.478 0.00 0.00 0.00 2.24
3458 3589 2.621526 GGATGTTTGTTTCCCGTGACTT 59.378 45.455 0.00 0.00 0.00 3.01
3459 3590 2.158667 AGGATGTTTGTTTCCCGTGACT 60.159 45.455 0.00 0.00 32.05 3.41
3460 3591 2.225727 GAGGATGTTTGTTTCCCGTGAC 59.774 50.000 0.00 0.00 32.05 3.67
3461 3592 2.105821 AGAGGATGTTTGTTTCCCGTGA 59.894 45.455 0.00 0.00 32.05 4.35
3462 3593 2.504367 AGAGGATGTTTGTTTCCCGTG 58.496 47.619 0.00 0.00 32.05 4.94
3463 3594 2.951229 AGAGGATGTTTGTTTCCCGT 57.049 45.000 0.00 0.00 32.05 5.28
3464 3595 5.897377 ATTAAGAGGATGTTTGTTTCCCG 57.103 39.130 0.00 0.00 32.05 5.14
3465 3596 6.210584 TCCAATTAAGAGGATGTTTGTTTCCC 59.789 38.462 0.00 0.00 32.05 3.97
3466 3597 7.176690 TCTCCAATTAAGAGGATGTTTGTTTCC 59.823 37.037 5.16 0.00 32.53 3.13
3467 3598 8.110860 TCTCCAATTAAGAGGATGTTTGTTTC 57.889 34.615 5.16 0.00 32.53 2.78
3468 3599 7.944554 TCTCTCCAATTAAGAGGATGTTTGTTT 59.055 33.333 14.07 0.00 40.58 2.83
3469 3600 7.461749 TCTCTCCAATTAAGAGGATGTTTGTT 58.538 34.615 14.07 0.00 40.58 2.83
3470 3601 7.020827 TCTCTCCAATTAAGAGGATGTTTGT 57.979 36.000 14.07 0.00 40.58 2.83
3471 3602 7.928307 TTCTCTCCAATTAAGAGGATGTTTG 57.072 36.000 14.07 0.00 40.58 2.93
3472 3603 8.964772 CATTTCTCTCCAATTAAGAGGATGTTT 58.035 33.333 14.07 0.00 40.58 2.83
3473 3604 7.067981 GCATTTCTCTCCAATTAAGAGGATGTT 59.932 37.037 20.32 4.64 40.58 2.71
3474 3605 6.545298 GCATTTCTCTCCAATTAAGAGGATGT 59.455 38.462 20.32 6.85 40.58 3.06
3475 3606 6.016443 GGCATTTCTCTCCAATTAAGAGGATG 60.016 42.308 14.07 16.40 40.58 3.51
3476 3607 6.067350 GGCATTTCTCTCCAATTAAGAGGAT 58.933 40.000 14.07 8.22 40.58 3.24
3477 3608 5.440610 GGCATTTCTCTCCAATTAAGAGGA 58.559 41.667 14.07 5.78 40.58 3.71
3478 3609 4.274459 CGGCATTTCTCTCCAATTAAGAGG 59.726 45.833 14.07 0.00 40.58 3.69
3479 3610 5.118990 TCGGCATTTCTCTCCAATTAAGAG 58.881 41.667 9.69 9.69 41.38 2.85
3480 3611 5.097742 TCGGCATTTCTCTCCAATTAAGA 57.902 39.130 0.00 0.00 0.00 2.10
3481 3612 4.274459 CCTCGGCATTTCTCTCCAATTAAG 59.726 45.833 0.00 0.00 0.00 1.85
3482 3613 4.199310 CCTCGGCATTTCTCTCCAATTAA 58.801 43.478 0.00 0.00 0.00 1.40
3483 3614 3.808728 CCTCGGCATTTCTCTCCAATTA 58.191 45.455 0.00 0.00 0.00 1.40
3484 3615 2.648059 CCTCGGCATTTCTCTCCAATT 58.352 47.619 0.00 0.00 0.00 2.32
3485 3616 1.748591 GCCTCGGCATTTCTCTCCAAT 60.749 52.381 2.41 0.00 41.49 3.16
3486 3617 0.392998 GCCTCGGCATTTCTCTCCAA 60.393 55.000 2.41 0.00 41.49 3.53
3487 3618 1.221840 GCCTCGGCATTTCTCTCCA 59.778 57.895 2.41 0.00 41.49 3.86
3488 3619 4.132999 GCCTCGGCATTTCTCTCC 57.867 61.111 2.41 0.00 41.49 3.71
3565 3697 9.562408 TCATCTCATTCTACGAATCTAGTACTT 57.438 33.333 0.00 0.00 0.00 2.24
3624 4019 6.598753 TTCGGTAAACTTGAGAGACAAAAG 57.401 37.500 0.00 0.00 38.08 2.27
3649 4044 9.088512 AGCGTCAACTAAAGTTCAAATATAGAG 57.911 33.333 0.00 0.00 35.83 2.43
3656 4051 5.694910 CCTCTAGCGTCAACTAAAGTTCAAA 59.305 40.000 0.00 0.00 35.83 2.69
3658 4053 4.521639 TCCTCTAGCGTCAACTAAAGTTCA 59.478 41.667 0.00 0.00 35.83 3.18
3659 4054 4.858140 GTCCTCTAGCGTCAACTAAAGTTC 59.142 45.833 0.00 0.00 35.83 3.01
3662 4395 4.436242 TGTCCTCTAGCGTCAACTAAAG 57.564 45.455 0.00 0.00 0.00 1.85
3678 4411 7.612633 TCAGGTTTTAACAACTAAACTTGTCCT 59.387 33.333 0.00 0.00 40.29 3.85
3679 4412 7.699391 GTCAGGTTTTAACAACTAAACTTGTCC 59.301 37.037 0.00 0.00 40.29 4.02
3681 4414 8.113173 TGTCAGGTTTTAACAACTAAACTTGT 57.887 30.769 0.00 0.00 40.29 3.16
3693 4426 6.391537 TGGAACAAAGTTGTCAGGTTTTAAC 58.608 36.000 0.00 0.00 41.31 2.01
3749 4483 2.442212 TAATTCACGCGAGGTTGACA 57.558 45.000 15.93 0.00 0.00 3.58
3751 4485 3.395639 ACTTTAATTCACGCGAGGTTGA 58.604 40.909 15.93 2.15 0.00 3.18
3755 4489 2.505866 GCAACTTTAATTCACGCGAGG 58.494 47.619 15.93 4.29 0.00 4.63
3785 4519 8.379902 GGATTTTTAAGCATGGTAATTTGAACG 58.620 33.333 0.00 0.00 0.00 3.95
3791 4525 9.737844 ACATTTGGATTTTTAAGCATGGTAATT 57.262 25.926 0.00 0.00 0.00 1.40
3795 4529 6.368516 CGAACATTTGGATTTTTAAGCATGGT 59.631 34.615 0.00 0.00 0.00 3.55
3810 4544 6.701400 GGAAATGATAAATCCCGAACATTTGG 59.299 38.462 0.00 0.00 37.82 3.28
3815 4549 4.519213 ACGGAAATGATAAATCCCGAACA 58.481 39.130 0.00 0.00 40.10 3.18
3820 4554 7.803279 AACTTCTACGGAAATGATAAATCCC 57.197 36.000 0.00 0.00 0.00 3.85
3825 4559 9.321562 GGACAATAACTTCTACGGAAATGATAA 57.678 33.333 0.00 0.00 0.00 1.75
3839 4573 6.092259 AGCGACTAATTGTGGACAATAACTTC 59.908 38.462 5.45 0.87 45.06 3.01
3849 4583 3.195610 AGACATGAGCGACTAATTGTGGA 59.804 43.478 0.00 0.00 0.00 4.02
3850 4584 3.525537 AGACATGAGCGACTAATTGTGG 58.474 45.455 0.00 0.00 0.00 4.17
3899 6178 5.327732 ACCAGTTTTCCAATCTGATGTGAT 58.672 37.500 0.00 0.00 0.00 3.06
3900 6179 4.728772 ACCAGTTTTCCAATCTGATGTGA 58.271 39.130 0.00 0.00 0.00 3.58
3901 6180 4.520111 TGACCAGTTTTCCAATCTGATGTG 59.480 41.667 0.00 0.00 0.00 3.21
3902 6181 4.520492 GTGACCAGTTTTCCAATCTGATGT 59.480 41.667 0.00 0.00 0.00 3.06
3903 6182 4.520111 TGTGACCAGTTTTCCAATCTGATG 59.480 41.667 0.00 0.00 0.00 3.07
3904 6183 4.728772 TGTGACCAGTTTTCCAATCTGAT 58.271 39.130 0.00 0.00 0.00 2.90
3906 6185 4.279169 ACATGTGACCAGTTTTCCAATCTG 59.721 41.667 0.00 0.00 0.00 2.90
3922 6202 5.049749 CACGTCATTTTAAGTGGACATGTGA 60.050 40.000 1.15 0.00 0.00 3.58
3926 6206 4.154195 GCTCACGTCATTTTAAGTGGACAT 59.846 41.667 0.00 0.00 35.50 3.06
3952 6232 0.872388 GGGTAAGCAACTGACAACCG 59.128 55.000 0.00 0.00 0.00 4.44
3982 6262 2.853430 TGGACCCCTTCTATAAGCCAA 58.147 47.619 0.00 0.00 0.00 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.