Multiple sequence alignment - TraesCS2D01G090300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G090300 chr2D 100.000 8645 0 0 1 8645 41913723 41922367 0.000000e+00 15965.0
1 TraesCS2D01G090300 chr2D 98.723 235 3 0 3092 3326 41916579 41916813 1.340000e-112 418.0
2 TraesCS2D01G090300 chr2D 98.723 235 3 0 2857 3091 41916814 41917048 1.340000e-112 418.0
3 TraesCS2D01G090300 chr2D 94.444 126 7 0 8036 8161 41921631 41921756 2.460000e-45 195.0
4 TraesCS2D01G090300 chr2D 94.444 126 7 0 7909 8034 41921758 41921883 2.460000e-45 195.0
5 TraesCS2D01G090300 chr2D 92.381 105 5 3 2707 2810 555221187 555221085 6.990000e-31 147.0
6 TraesCS2D01G090300 chr2D 87.826 115 12 2 3964 4078 607078958 607078846 5.440000e-27 134.0
7 TraesCS2D01G090300 chr2D 82.645 121 11 7 1119 1238 583224875 583224764 1.990000e-16 99.0
8 TraesCS2D01G090300 chr2A 96.553 4003 69 12 4031 8023 43684298 43688241 0.000000e+00 6564.0
9 TraesCS2D01G090300 chr2A 97.498 1519 36 2 631 2147 43680917 43682435 0.000000e+00 2593.0
10 TraesCS2D01G090300 chr2A 98.843 778 9 0 3201 3978 43683502 43684279 0.000000e+00 1387.0
11 TraesCS2D01G090300 chr2A 96.880 641 18 2 1 640 43670505 43671144 0.000000e+00 1072.0
12 TraesCS2D01G090300 chr2A 96.599 441 9 3 2211 2645 43682435 43682875 0.000000e+00 726.0
13 TraesCS2D01G090300 chr2A 84.921 630 61 11 7033 7628 32008132 32007503 2.670000e-169 606.0
14 TraesCS2D01G090300 chr2A 92.593 378 25 1 6315 6689 32008973 32008596 2.750000e-149 540.0
15 TraesCS2D01G090300 chr2A 86.560 439 51 5 55 485 14898864 14898426 2.180000e-130 477.0
16 TraesCS2D01G090300 chr2A 96.296 270 8 1 8097 8364 43705552 43705821 7.960000e-120 442.0
17 TraesCS2D01G090300 chr2A 95.620 274 5 1 8379 8645 43705805 43706078 4.790000e-117 433.0
18 TraesCS2D01G090300 chr2A 84.397 423 37 13 611 1009 32009394 32008977 1.050000e-103 388.0
19 TraesCS2D01G090300 chr2A 99.206 126 1 0 2966 3091 43683502 43683627 2.430000e-55 228.0
20 TraesCS2D01G090300 chr2A 87.209 172 14 7 3965 4134 594579655 594579490 1.150000e-43 189.0
21 TraesCS2D01G090300 chr2A 90.769 130 12 0 8431 8560 4071796 4071925 3.210000e-39 174.0
22 TraesCS2D01G090300 chr2A 97.468 79 2 0 8024 8102 43702155 43702233 1.510000e-27 135.0
23 TraesCS2D01G090300 chr2A 94.444 72 4 0 7904 7975 43702162 43702233 2.550000e-20 111.0
24 TraesCS2D01G090300 chr5B 91.534 1512 95 10 5204 6689 261192665 261194169 0.000000e+00 2052.0
25 TraesCS2D01G090300 chr5B 86.844 1353 119 29 1377 2703 261189719 261191038 0.000000e+00 1458.0
26 TraesCS2D01G090300 chr5B 88.589 964 84 9 6704 7646 261194325 261195283 0.000000e+00 1147.0
27 TraesCS2D01G090300 chr5B 81.507 1433 229 24 4516 5934 257530561 257531971 0.000000e+00 1146.0
28 TraesCS2D01G090300 chr5B 91.952 671 44 7 4461 5126 261192001 261192666 0.000000e+00 931.0
29 TraesCS2D01G090300 chr5B 79.468 1354 245 23 4850 6187 257334970 257336306 0.000000e+00 929.0
30 TraesCS2D01G090300 chr5B 87.078 859 65 15 3125 3964 261191178 261192009 0.000000e+00 929.0
31 TraesCS2D01G090300 chr5B 84.426 488 68 5 1 480 532596861 532597348 2.820000e-129 473.0
32 TraesCS2D01G090300 chr5B 76.491 570 111 18 3400 3953 257332661 257333223 1.100000e-73 289.0
33 TraesCS2D01G090300 chr5B 85.635 181 17 6 2452 2630 257527925 257528098 1.920000e-41 182.0
34 TraesCS2D01G090300 chr5B 85.083 181 18 6 2452 2630 257331755 257331928 8.920000e-40 176.0
35 TraesCS2D01G090300 chr5B 89.630 135 10 3 2760 2890 257332294 257332428 1.490000e-37 169.0
36 TraesCS2D01G090300 chr5B 90.076 131 10 2 2890 3018 261191178 261191307 5.370000e-37 167.0
37 TraesCS2D01G090300 chr5B 88.889 135 11 3 2760 2890 257528464 257528598 6.940000e-36 163.0
38 TraesCS2D01G090300 chr5B 95.455 44 2 0 497 540 692745320 692745363 4.330000e-08 71.3
39 TraesCS2D01G090300 chr5B 100.000 34 0 0 501 534 532597340 532597373 7.250000e-06 63.9
40 TraesCS2D01G090300 chr5A 91.468 1512 95 11 5204 6689 322125802 322124299 0.000000e+00 2047.0
41 TraesCS2D01G090300 chr5A 87.111 1350 116 28 1380 2703 322128947 322127630 0.000000e+00 1476.0
42 TraesCS2D01G090300 chr5A 88.554 961 82 10 6707 7646 322124140 322123187 0.000000e+00 1140.0
43 TraesCS2D01G090300 chr5A 91.940 670 45 6 4461 5126 322126465 322125801 0.000000e+00 929.0
44 TraesCS2D01G090300 chr5A 89.616 703 53 10 3279 3964 322127156 322126457 0.000000e+00 876.0
45 TraesCS2D01G090300 chr5A 82.566 304 22 10 4192 4466 545127709 545128010 1.120000e-58 239.0
46 TraesCS2D01G090300 chr5A 94.776 134 3 2 4329 4458 451015615 451015482 1.140000e-48 206.0
47 TraesCS2D01G090300 chr5A 87.097 186 14 5 640 815 322133381 322133196 1.470000e-47 202.0
48 TraesCS2D01G090300 chr5A 86.170 94 11 2 8549 8640 450411996 450411903 5.520000e-17 100.0
49 TraesCS2D01G090300 chr2B 85.400 1000 96 21 6704 7660 48136036 48135044 0.000000e+00 992.0
50 TraesCS2D01G090300 chr2B 85.171 762 67 15 7043 7761 49302278 49303036 0.000000e+00 739.0
51 TraesCS2D01G090300 chr2B 87.297 370 29 7 6324 6687 49301473 49301830 2.910000e-109 407.0
52 TraesCS2D01G090300 chr2B 84.755 387 29 11 535 916 49299688 49300049 2.290000e-95 361.0
53 TraesCS2D01G090300 chr2B 91.188 261 22 1 780 1039 48136869 48136609 3.840000e-93 353.0
54 TraesCS2D01G090300 chr2B 89.313 131 13 1 906 1036 49301340 49301469 6.940000e-36 163.0
55 TraesCS2D01G090300 chr2B 90.991 111 6 4 2685 2794 667802222 667802115 6.990000e-31 147.0
56 TraesCS2D01G090300 chr2B 88.660 97 8 2 537 633 48137036 48136943 1.970000e-21 115.0
57 TraesCS2D01G090300 chr2B 82.645 121 10 8 1119 1238 702718350 702718240 7.140000e-16 97.1
58 TraesCS2D01G090300 chr7D 84.380 621 60 24 1402 2009 464271708 464272304 7.530000e-160 575.0
59 TraesCS2D01G090300 chr7D 87.154 506 42 16 1511 2009 464266211 464266700 3.530000e-153 553.0
60 TraesCS2D01G090300 chr7D 86.207 493 54 9 1 480 257512428 257512919 9.950000e-144 521.0
61 TraesCS2D01G090300 chr7D 89.474 114 8 4 2691 2802 350149434 350149323 3.250000e-29 141.0
62 TraesCS2D01G090300 chr7D 80.263 152 21 8 4202 4351 240175414 240175270 1.190000e-18 106.0
63 TraesCS2D01G090300 chr6D 87.090 488 53 5 1 480 390793894 390794379 2.120000e-150 544.0
64 TraesCS2D01G090300 chr6D 87.689 463 47 7 5 459 11758186 11757726 1.650000e-146 531.0
65 TraesCS2D01G090300 chr6D 91.509 106 5 4 2688 2792 271233425 271233527 9.050000e-30 143.0
66 TraesCS2D01G090300 chr6D 80.392 153 23 7 4201 4351 363294910 363295057 9.180000e-20 110.0
67 TraesCS2D01G090300 chr6D 95.000 40 2 0 501 540 11757716 11757677 7.250000e-06 63.9
68 TraesCS2D01G090300 chr3D 86.912 489 54 6 1 483 21705998 21705514 2.750000e-149 540.0
69 TraesCS2D01G090300 chr3D 82.927 82 14 0 8559 8640 486689151 486689070 3.350000e-09 75.0
70 TraesCS2D01G090300 chr3B 85.631 515 43 21 1511 2010 689341012 689340514 5.990000e-141 512.0
71 TraesCS2D01G090300 chr3B 85.575 513 45 19 1511 2009 689016658 689016161 2.150000e-140 510.0
72 TraesCS2D01G090300 chr3B 85.192 520 48 19 1511 2016 689010892 689010388 2.780000e-139 507.0
73 TraesCS2D01G090300 chr3B 87.390 341 26 9 1677 2009 689345560 689345229 8.190000e-100 375.0
74 TraesCS2D01G090300 chr3B 84.175 297 19 19 4192 4461 167058668 167058373 6.660000e-66 263.0
75 TraesCS2D01G090300 chr3B 80.456 307 41 9 4159 4460 710386981 710387273 5.260000e-52 217.0
76 TraesCS2D01G090300 chr6B 86.836 433 54 3 1 431 583679609 583679178 1.690000e-131 481.0
77 TraesCS2D01G090300 chr6B 86.667 150 17 2 8437 8585 25044142 25043995 6.940000e-36 163.0
78 TraesCS2D01G090300 chr6B 97.849 93 2 0 2701 2793 288999180 288999272 2.500000e-35 161.0
79 TraesCS2D01G090300 chr6B 91.892 111 6 3 2697 2806 342268384 342268492 1.500000e-32 152.0
80 TraesCS2D01G090300 chr6B 71.413 941 148 76 1118 2009 280368588 280367720 1.510000e-27 135.0
81 TraesCS2D01G090300 chr6B 73.654 353 50 27 1495 1824 280374007 280373675 7.140000e-16 97.1
82 TraesCS2D01G090300 chrUn 82.696 497 71 11 1 485 275172 274679 2.230000e-115 427.0
83 TraesCS2D01G090300 chr7B 84.775 289 29 6 4187 4460 726303417 726303705 8.550000e-70 276.0
84 TraesCS2D01G090300 chr7B 90.541 148 10 4 4316 4459 726540203 726540350 8.860000e-45 193.0
85 TraesCS2D01G090300 chr7B 93.548 124 8 0 8431 8554 151286488 151286611 1.480000e-42 185.0
86 TraesCS2D01G090300 chr7B 80.921 152 20 8 4202 4351 104603195 104603339 2.550000e-20 111.0
87 TraesCS2D01G090300 chr7B 80.000 125 14 7 1434 1555 468057845 468057961 2.000000e-11 82.4
88 TraesCS2D01G090300 chr7B 80.000 125 14 7 1434 1555 707739099 707738983 2.000000e-11 82.4
89 TraesCS2D01G090300 chr7B 79.200 125 15 7 1434 1555 112002911 112002795 9.310000e-10 76.8
90 TraesCS2D01G090300 chr7A 81.388 317 41 15 4154 4465 268863228 268863531 8.670000e-60 243.0
91 TraesCS2D01G090300 chr7A 94.167 120 6 1 8437 8555 593795545 593795426 1.920000e-41 182.0
92 TraesCS2D01G090300 chr7A 81.208 149 24 2 1567 1711 714984716 714984568 5.480000e-22 117.0
93 TraesCS2D01G090300 chr7A 90.667 75 7 0 8549 8623 672863182 672863256 5.520000e-17 100.0
94 TraesCS2D01G090300 chr3A 80.667 300 26 11 4185 4456 47224765 47224470 4.090000e-48 204.0
95 TraesCS2D01G090300 chr3A 94.167 120 6 1 8431 8550 151013014 151013132 1.920000e-41 182.0
96 TraesCS2D01G090300 chr1D 81.712 257 36 9 4208 4460 445587633 445587384 4.090000e-48 204.0
97 TraesCS2D01G090300 chr1D 100.000 34 0 0 501 534 19976753 19976720 7.250000e-06 63.9
98 TraesCS2D01G090300 chr4B 94.118 119 6 1 8437 8554 376163595 376163477 6.900000e-41 180.0
99 TraesCS2D01G090300 chr4B 79.739 153 20 8 4201 4351 532381003 532381146 5.520000e-17 100.0
100 TraesCS2D01G090300 chr1A 91.111 135 8 4 1483 1614 582456295 582456162 6.900000e-41 180.0
101 TraesCS2D01G090300 chr1A 100.000 37 0 0 501 537 21348297 21348261 1.560000e-07 69.4
102 TraesCS2D01G090300 chr4A 92.063 126 9 1 8431 8555 440085963 440086088 8.920000e-40 176.0
103 TraesCS2D01G090300 chr4A 94.845 97 5 0 2707 2803 650851297 650851201 1.500000e-32 152.0
104 TraesCS2D01G090300 chr4A 94.845 97 5 0 2707 2803 650861500 650861404 1.500000e-32 152.0
105 TraesCS2D01G090300 chr4A 94.737 38 2 0 497 534 619405623 619405660 9.370000e-05 60.2
106 TraesCS2D01G090300 chr1B 92.562 121 7 2 8431 8550 145361568 145361687 1.150000e-38 172.0
107 TraesCS2D01G090300 chr1B 97.368 38 1 0 497 534 32159450 32159413 2.010000e-06 65.8
108 TraesCS2D01G090300 chr6A 89.474 114 10 2 2701 2812 26632961 26632848 9.050000e-30 143.0
109 TraesCS2D01G090300 chr6A 82.418 91 16 0 8549 8639 291329537 291329627 7.190000e-11 80.5
110 TraesCS2D01G090300 chr4D 79.221 154 21 10 4201 4351 443361684 443361829 7.140000e-16 97.1
111 TraesCS2D01G090300 chr5D 97.368 38 1 0 497 534 548531208 548531245 2.010000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G090300 chr2D 41913723 41922367 8644 False 15965.000000 15965 100.000000 1 8645 1 chr2D.!!$F1 8644
1 TraesCS2D01G090300 chr2A 43680917 43688241 7324 False 2299.600000 6564 97.739800 631 8023 5 chr2A.!!$F3 7392
2 TraesCS2D01G090300 chr2A 43670505 43671144 639 False 1072.000000 1072 96.880000 1 640 1 chr2A.!!$F2 639
3 TraesCS2D01G090300 chr2A 32007503 32009394 1891 True 511.333333 606 87.303667 611 7628 3 chr2A.!!$R3 7017
4 TraesCS2D01G090300 chr2A 43702155 43706078 3923 False 280.250000 442 95.957000 7904 8645 4 chr2A.!!$F4 741
5 TraesCS2D01G090300 chr5B 261189719 261195283 5564 False 1114.000000 2052 89.345500 1377 7646 6 chr5B.!!$F4 6269
6 TraesCS2D01G090300 chr5B 257527925 257531971 4046 False 497.000000 1146 85.343667 2452 5934 3 chr5B.!!$F3 3482
7 TraesCS2D01G090300 chr5B 257331755 257336306 4551 False 390.750000 929 82.668000 2452 6187 4 chr5B.!!$F2 3735
8 TraesCS2D01G090300 chr5B 532596861 532597373 512 False 268.450000 473 92.213000 1 534 2 chr5B.!!$F5 533
9 TraesCS2D01G090300 chr5A 322123187 322128947 5760 True 1293.600000 2047 89.737800 1380 7646 5 chr5A.!!$R4 6266
10 TraesCS2D01G090300 chr2B 48135044 48137036 1992 True 486.666667 992 88.416000 537 7660 3 chr2B.!!$R3 7123
11 TraesCS2D01G090300 chr2B 49299688 49303036 3348 False 417.500000 739 86.634000 535 7761 4 chr2B.!!$F1 7226
12 TraesCS2D01G090300 chr7D 464271708 464272304 596 False 575.000000 575 84.380000 1402 2009 1 chr7D.!!$F3 607
13 TraesCS2D01G090300 chr6D 11757677 11758186 509 True 297.450000 531 91.344500 5 540 2 chr6D.!!$R1 535
14 TraesCS2D01G090300 chr3B 689010388 689010892 504 True 507.000000 507 85.192000 1511 2016 1 chr3B.!!$R2 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
986 2324 0.517316 GTGTCATCCAGAAACGGCAC 59.483 55.000 0.00 0.00 0.00 5.01 F
2193 3564 0.037877 AAGCAGCTGCATCTCTTGGT 59.962 50.000 38.24 13.55 45.16 3.67 F
2202 3573 0.393537 CATCTCTTGGTGGGTGGAGC 60.394 60.000 0.00 0.00 0.00 4.70 F
3174 5083 0.766131 ACGGTTGGTTGTATGGGTGA 59.234 50.000 0.00 0.00 0.00 4.02 F
3202 5111 0.177373 CTTGGTAGGCGGGGAGTAAC 59.823 60.000 0.00 0.00 0.00 2.50 F
3980 6077 0.258774 TTTGGGAATGGCTAGGAGGC 59.741 55.000 0.00 0.00 41.77 4.70 F
4019 6116 0.589223 TTTGTGTCGGTCGATTTGGC 59.411 50.000 0.00 0.00 0.00 4.52 F
4025 6122 1.153168 CGGTCGATTTGGCCTGGAT 60.153 57.895 3.32 0.00 0.00 3.41 F
4026 6123 1.439353 CGGTCGATTTGGCCTGGATG 61.439 60.000 3.32 0.00 0.00 3.51 F
4275 6372 1.461075 CCATCCCTCTAGCCCTGCT 60.461 63.158 0.00 0.00 43.41 4.24 F
4336 6433 1.571773 CCCCCACCCTGAACCCTAAG 61.572 65.000 0.00 0.00 0.00 2.18 F
4937 8237 3.288809 TCTCATCGATTAGCATGTCCG 57.711 47.619 0.00 0.00 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2954 4860 0.468648 GCTTATGTTACTCCCCGCCT 59.531 55.000 0.00 0.00 0.00 5.52 R
3183 5092 0.177373 GTTACTCCCCGCCTACCAAG 59.823 60.000 0.00 0.00 0.00 3.61 R
3185 5094 0.325860 ATGTTACTCCCCGCCTACCA 60.326 55.000 0.00 0.00 0.00 3.25 R
4678 7814 0.031178 AAGCCAGTCTTTTGCTTGCG 59.969 50.000 0.00 0.00 43.30 4.85 R
4917 8217 2.623416 ACGGACATGCTAATCGATGAGA 59.377 45.455 14.43 0.00 0.00 3.27 R
5963 9270 3.869065 TCCAGTTTCCATTGACGGATAC 58.131 45.455 0.00 0.00 37.30 2.24 R
6295 9623 6.039270 CAGATCCAGGTGTGTTTGTTTCTTTA 59.961 38.462 0.00 0.00 0.00 1.85 R
6759 10297 5.430089 AGAGTCTGGCCTGTAGGAAAATATT 59.570 40.000 3.32 0.00 37.39 1.28 R
6891 10429 4.698304 TGGAGCGTCTTTTAATAAACTGGG 59.302 41.667 0.00 0.00 0.00 4.45 R
6989 10532 9.883142 AATTCACCACAATCACTAAAAGAAAAA 57.117 25.926 0.00 0.00 0.00 1.94 R
7263 10864 4.440214 CGAACCGCATTGCTGAAC 57.560 55.556 7.09 0.15 0.00 3.18 R
7810 11442 0.955905 TCAGCCGGCTTAAAACAACC 59.044 50.000 30.60 0.00 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
274 281 6.472887 TGCTACTTAGAGTGCAACCTTAATT 58.527 36.000 0.00 0.00 37.80 1.40
285 292 3.543460 GCAACCTTAATTAGTAGCGCACG 60.543 47.826 11.47 0.00 0.00 5.34
388 397 1.131504 TCAAACGTGTTGTGGTTCTGC 59.868 47.619 0.00 0.00 0.00 4.26
446 459 6.508563 CGACGAACAACAATAAGATGAGATGG 60.509 42.308 0.00 0.00 0.00 3.51
559 572 7.637519 CAGTCATAGAAAATGCACTGATAAACG 59.362 37.037 0.00 0.00 33.31 3.60
607 620 2.606519 AAGACCTACGGCAGCCCA 60.607 61.111 5.63 0.00 0.00 5.36
986 2324 0.517316 GTGTCATCCAGAAACGGCAC 59.483 55.000 0.00 0.00 0.00 5.01
1054 2392 2.742372 GCGGCGTCATCAAGGTGT 60.742 61.111 9.37 0.00 0.00 4.16
1164 2502 6.774656 CCAAATCACCTCCTTCTAATTGCTAT 59.225 38.462 0.00 0.00 0.00 2.97
1300 2638 8.842280 CCATAGCAAATTATACCTTAACCGAAA 58.158 33.333 0.00 0.00 0.00 3.46
1624 2974 1.352083 GATGCACCCCTCAGCCTATA 58.648 55.000 0.00 0.00 0.00 1.31
1837 3195 6.469915 TGTTAGCAAGTTGTATGATACGTACG 59.530 38.462 15.01 15.01 0.00 3.67
1930 3297 0.609957 CAGCTGGATTTGGTGCCTCA 60.610 55.000 5.57 0.00 0.00 3.86
1957 3325 1.201414 GGCATGTACGTGGGGAAAAAG 59.799 52.381 16.68 0.00 0.00 2.27
1962 3330 2.158726 TGTACGTGGGGAAAAAGAGCTT 60.159 45.455 0.00 0.00 0.00 3.74
2148 3519 1.280133 CTGCTCCTTCCATGTTCCTGA 59.720 52.381 0.00 0.00 0.00 3.86
2151 3522 0.620556 TCCTTCCATGTTCCTGAGCC 59.379 55.000 0.00 0.00 0.00 4.70
2152 3523 0.329261 CCTTCCATGTTCCTGAGCCA 59.671 55.000 0.00 0.00 0.00 4.75
2193 3564 0.037877 AAGCAGCTGCATCTCTTGGT 59.962 50.000 38.24 13.55 45.16 3.67
2202 3573 0.393537 CATCTCTTGGTGGGTGGAGC 60.394 60.000 0.00 0.00 0.00 4.70
2209 3580 4.626081 GTGGGTGGAGCAGCACGT 62.626 66.667 0.00 0.00 33.07 4.49
2210 3581 3.872603 TGGGTGGAGCAGCACGTT 61.873 61.111 0.00 0.00 33.07 3.99
2221 3598 3.053291 GCACGTTCGCCCCATCAA 61.053 61.111 0.00 0.00 0.00 2.57
2237 3614 5.219633 CCCATCAAGGTTTTTACAAGAACG 58.780 41.667 0.00 0.00 34.66 3.95
2287 3664 1.375523 GCTTTGGGTCGACCGTGAT 60.376 57.895 27.68 0.00 44.64 3.06
2391 3768 2.364353 CAAAATCTTGGGCTGGCCA 58.636 52.632 20.19 20.19 37.98 5.36
2698 4286 6.899393 ATGTTGATCCTGTTGTTTATGTGT 57.101 33.333 0.00 0.00 0.00 3.72
2705 4293 8.758829 TGATCCTGTTGTTTATGTGTCTACTAT 58.241 33.333 0.00 0.00 0.00 2.12
2715 4303 8.693625 GTTTATGTGTCTACTATGTACTCCCTT 58.306 37.037 0.00 0.00 0.00 3.95
2716 4304 6.963083 ATGTGTCTACTATGTACTCCCTTC 57.037 41.667 0.00 0.00 0.00 3.46
2734 4322 8.358895 ACTCCCTTCGTAAACTAATATAAGAGC 58.641 37.037 0.00 0.00 0.00 4.09
2736 4324 8.867097 TCCCTTCGTAAACTAATATAAGAGCAT 58.133 33.333 0.00 0.00 0.00 3.79
2737 4325 9.490379 CCCTTCGTAAACTAATATAAGAGCATT 57.510 33.333 0.00 0.00 0.00 3.56
2869 4537 2.940994 TGTCAAAACAGGGGAATCGA 57.059 45.000 0.00 0.00 0.00 3.59
2995 4904 6.450545 AGCTTTATCTTTTTCTCCACAAAGC 58.549 36.000 7.45 7.45 44.24 3.51
3088 4997 6.791887 CGTGATCCGTAATTAGTACTAGGA 57.208 41.667 9.56 9.56 29.79 2.94
3089 4998 7.375106 CGTGATCCGTAATTAGTACTAGGAT 57.625 40.000 16.59 16.59 36.29 3.24
3090 4999 7.814642 CGTGATCCGTAATTAGTACTAGGATT 58.185 38.462 17.32 11.70 34.70 3.01
3091 5000 8.939929 CGTGATCCGTAATTAGTACTAGGATTA 58.060 37.037 17.32 12.65 34.70 1.75
3096 5005 9.071276 TCCGTAATTAGTACTAGGATTAACAGG 57.929 37.037 2.23 9.42 0.00 4.00
3097 5006 8.302438 CCGTAATTAGTACTAGGATTAACAGGG 58.698 40.741 2.23 0.00 0.00 4.45
3098 5007 8.302438 CGTAATTAGTACTAGGATTAACAGGGG 58.698 40.741 2.23 0.00 0.00 4.79
3099 5008 9.372189 GTAATTAGTACTAGGATTAACAGGGGA 57.628 37.037 2.23 0.00 0.00 4.81
3100 5009 8.865244 AATTAGTACTAGGATTAACAGGGGAA 57.135 34.615 2.23 0.00 0.00 3.97
3101 5010 9.461734 AATTAGTACTAGGATTAACAGGGGAAT 57.538 33.333 2.23 0.00 0.00 3.01
3102 5011 6.997942 AGTACTAGGATTAACAGGGGAATC 57.002 41.667 0.00 0.00 0.00 2.52
3103 5012 4.957684 ACTAGGATTAACAGGGGAATCG 57.042 45.455 0.00 0.00 33.63 3.34
3104 5013 4.553678 ACTAGGATTAACAGGGGAATCGA 58.446 43.478 0.00 0.00 33.63 3.59
3105 5014 5.155905 ACTAGGATTAACAGGGGAATCGAT 58.844 41.667 0.00 0.00 33.63 3.59
3106 5015 4.357918 AGGATTAACAGGGGAATCGATG 57.642 45.455 0.00 0.00 33.63 3.84
3107 5016 2.814336 GGATTAACAGGGGAATCGATGC 59.186 50.000 0.00 0.00 33.63 3.91
3108 5017 3.496870 GGATTAACAGGGGAATCGATGCT 60.497 47.826 2.72 0.00 33.63 3.79
3109 5018 2.910688 TAACAGGGGAATCGATGCTC 57.089 50.000 2.72 0.00 0.00 4.26
3110 5019 1.207791 AACAGGGGAATCGATGCTCT 58.792 50.000 2.49 0.00 0.00 4.09
3111 5020 2.088104 ACAGGGGAATCGATGCTCTA 57.912 50.000 2.49 0.00 0.00 2.43
3112 5021 2.614259 ACAGGGGAATCGATGCTCTAT 58.386 47.619 2.49 0.00 0.00 1.98
3113 5022 2.975489 ACAGGGGAATCGATGCTCTATT 59.025 45.455 2.49 0.00 0.00 1.73
3114 5023 3.392616 ACAGGGGAATCGATGCTCTATTT 59.607 43.478 2.49 0.00 0.00 1.40
3115 5024 3.750130 CAGGGGAATCGATGCTCTATTTG 59.250 47.826 2.49 0.00 0.00 2.32
3116 5025 3.648067 AGGGGAATCGATGCTCTATTTGA 59.352 43.478 2.49 0.00 0.00 2.69
3117 5026 4.288105 AGGGGAATCGATGCTCTATTTGAT 59.712 41.667 2.49 0.00 0.00 2.57
3118 5027 5.485353 AGGGGAATCGATGCTCTATTTGATA 59.515 40.000 2.49 0.00 0.00 2.15
3119 5028 5.582665 GGGGAATCGATGCTCTATTTGATAC 59.417 44.000 2.49 0.00 0.00 2.24
3120 5029 6.402222 GGGAATCGATGCTCTATTTGATACT 58.598 40.000 2.72 0.00 0.00 2.12
3121 5030 6.533367 GGGAATCGATGCTCTATTTGATACTC 59.467 42.308 2.72 0.00 0.00 2.59
3122 5031 6.533367 GGAATCGATGCTCTATTTGATACTCC 59.467 42.308 2.72 0.00 0.00 3.85
3123 5032 5.392767 TCGATGCTCTATTTGATACTCCC 57.607 43.478 0.00 0.00 0.00 4.30
3124 5033 5.080337 TCGATGCTCTATTTGATACTCCCT 58.920 41.667 0.00 0.00 0.00 4.20
3125 5034 6.246163 TCGATGCTCTATTTGATACTCCCTA 58.754 40.000 0.00 0.00 0.00 3.53
3126 5035 6.375736 TCGATGCTCTATTTGATACTCCCTAG 59.624 42.308 0.00 0.00 0.00 3.02
3127 5036 5.730296 TGCTCTATTTGATACTCCCTAGC 57.270 43.478 0.00 0.00 0.00 3.42
3128 5037 5.398236 TGCTCTATTTGATACTCCCTAGCT 58.602 41.667 0.00 0.00 0.00 3.32
3129 5038 6.552932 TGCTCTATTTGATACTCCCTAGCTA 58.447 40.000 0.00 0.00 0.00 3.32
3130 5039 7.010771 TGCTCTATTTGATACTCCCTAGCTAA 58.989 38.462 0.00 0.00 0.00 3.09
3131 5040 7.676043 TGCTCTATTTGATACTCCCTAGCTAAT 59.324 37.037 0.00 0.00 0.00 1.73
3132 5041 8.536175 GCTCTATTTGATACTCCCTAGCTAATT 58.464 37.037 0.00 0.00 0.00 1.40
3139 5048 9.601810 TTGATACTCCCTAGCTAATTAGATTGA 57.398 33.333 16.85 6.85 0.00 2.57
3140 5049 9.601810 TGATACTCCCTAGCTAATTAGATTGAA 57.398 33.333 16.85 2.53 0.00 2.69
3142 5051 9.830186 ATACTCCCTAGCTAATTAGATTGAAGA 57.170 33.333 16.85 9.85 0.00 2.87
3143 5052 8.734593 ACTCCCTAGCTAATTAGATTGAAGAT 57.265 34.615 16.85 0.00 0.00 2.40
3144 5053 8.592809 ACTCCCTAGCTAATTAGATTGAAGATG 58.407 37.037 16.85 7.83 0.00 2.90
3145 5054 8.497910 TCCCTAGCTAATTAGATTGAAGATGT 57.502 34.615 16.85 0.00 0.00 3.06
3146 5055 8.938883 TCCCTAGCTAATTAGATTGAAGATGTT 58.061 33.333 16.85 0.00 0.00 2.71
3147 5056 8.997323 CCCTAGCTAATTAGATTGAAGATGTTG 58.003 37.037 16.85 0.00 0.00 3.33
3148 5057 8.997323 CCTAGCTAATTAGATTGAAGATGTTGG 58.003 37.037 16.85 0.00 0.00 3.77
3149 5058 9.770097 CTAGCTAATTAGATTGAAGATGTTGGA 57.230 33.333 16.85 0.00 0.00 3.53
3151 5060 8.897752 AGCTAATTAGATTGAAGATGTTGGAAC 58.102 33.333 16.85 0.00 0.00 3.62
3152 5061 8.131731 GCTAATTAGATTGAAGATGTTGGAACC 58.868 37.037 16.85 0.00 0.00 3.62
3153 5062 9.177608 CTAATTAGATTGAAGATGTTGGAACCA 57.822 33.333 6.64 0.00 0.00 3.67
3154 5063 8.421249 AATTAGATTGAAGATGTTGGAACCAA 57.579 30.769 1.83 1.83 0.00 3.67
3155 5064 7.831691 TTAGATTGAAGATGTTGGAACCAAA 57.168 32.000 7.89 0.21 37.70 3.28
3156 5065 6.089249 AGATTGAAGATGTTGGAACCAAAC 57.911 37.500 7.89 4.02 37.70 2.93
3157 5066 3.980646 TGAAGATGTTGGAACCAAACG 57.019 42.857 7.89 0.00 37.70 3.60
3158 5067 2.621055 TGAAGATGTTGGAACCAAACGG 59.379 45.455 7.89 0.00 37.70 4.44
3159 5068 2.358322 AGATGTTGGAACCAAACGGT 57.642 45.000 7.89 0.00 37.70 4.83
3171 5080 2.715737 CAAACGGTTGGTTGTATGGG 57.284 50.000 4.93 0.00 39.30 4.00
3172 5081 1.957877 CAAACGGTTGGTTGTATGGGT 59.042 47.619 4.93 0.00 39.30 4.51
3173 5082 1.611519 AACGGTTGGTTGTATGGGTG 58.388 50.000 0.00 0.00 37.50 4.61
3174 5083 0.766131 ACGGTTGGTTGTATGGGTGA 59.234 50.000 0.00 0.00 0.00 4.02
3175 5084 1.143277 ACGGTTGGTTGTATGGGTGAA 59.857 47.619 0.00 0.00 0.00 3.18
3176 5085 1.810151 CGGTTGGTTGTATGGGTGAAG 59.190 52.381 0.00 0.00 0.00 3.02
3177 5086 1.544246 GGTTGGTTGTATGGGTGAAGC 59.456 52.381 0.00 0.00 0.00 3.86
3178 5087 2.514803 GTTGGTTGTATGGGTGAAGCT 58.485 47.619 0.00 0.00 0.00 3.74
3179 5088 2.890945 GTTGGTTGTATGGGTGAAGCTT 59.109 45.455 0.00 0.00 0.00 3.74
3180 5089 3.237268 TGGTTGTATGGGTGAAGCTTT 57.763 42.857 0.00 0.00 0.00 3.51
3181 5090 2.890311 TGGTTGTATGGGTGAAGCTTTG 59.110 45.455 0.00 0.00 0.00 2.77
3182 5091 2.231235 GGTTGTATGGGTGAAGCTTTGG 59.769 50.000 0.00 0.00 0.00 3.28
3183 5092 1.544724 TGTATGGGTGAAGCTTTGGC 58.455 50.000 0.00 0.00 39.06 4.52
3198 5107 4.176752 GGCTTGGTAGGCGGGGAG 62.177 72.222 0.00 0.00 37.19 4.30
3199 5108 3.400054 GCTTGGTAGGCGGGGAGT 61.400 66.667 0.00 0.00 0.00 3.85
3200 5109 2.062177 GCTTGGTAGGCGGGGAGTA 61.062 63.158 0.00 0.00 0.00 2.59
3201 5110 1.619807 GCTTGGTAGGCGGGGAGTAA 61.620 60.000 0.00 0.00 0.00 2.24
3202 5111 0.177373 CTTGGTAGGCGGGGAGTAAC 59.823 60.000 0.00 0.00 0.00 2.50
3203 5112 0.544833 TTGGTAGGCGGGGAGTAACA 60.545 55.000 0.00 0.00 0.00 2.41
3204 5113 0.325860 TGGTAGGCGGGGAGTAACAT 60.326 55.000 0.00 0.00 0.00 2.71
3205 5114 1.063038 TGGTAGGCGGGGAGTAACATA 60.063 52.381 0.00 0.00 0.00 2.29
3206 5115 2.041701 GGTAGGCGGGGAGTAACATAA 58.958 52.381 0.00 0.00 0.00 1.90
3207 5116 2.036862 GGTAGGCGGGGAGTAACATAAG 59.963 54.545 0.00 0.00 0.00 1.73
3208 5117 0.468648 AGGCGGGGAGTAACATAAGC 59.531 55.000 0.00 0.00 0.00 3.09
3209 5118 0.468648 GGCGGGGAGTAACATAAGCT 59.531 55.000 0.00 0.00 0.00 3.74
3210 5119 1.134189 GGCGGGGAGTAACATAAGCTT 60.134 52.381 3.48 3.48 0.00 3.74
3211 5120 2.640184 GCGGGGAGTAACATAAGCTTT 58.360 47.619 3.20 0.00 0.00 3.51
3212 5121 3.432608 GGCGGGGAGTAACATAAGCTTTA 60.433 47.826 3.20 0.00 0.00 1.85
3213 5122 4.386711 GCGGGGAGTAACATAAGCTTTAT 58.613 43.478 3.20 0.00 0.00 1.40
3214 5123 4.451435 GCGGGGAGTAACATAAGCTTTATC 59.549 45.833 3.20 0.00 0.00 1.75
3215 5124 5.742255 GCGGGGAGTAACATAAGCTTTATCT 60.742 44.000 3.20 0.00 0.00 1.98
3216 5125 6.289064 CGGGGAGTAACATAAGCTTTATCTT 58.711 40.000 3.20 0.00 0.00 2.40
3217 5126 6.766467 CGGGGAGTAACATAAGCTTTATCTTT 59.234 38.462 3.20 0.00 0.00 2.52
3218 5127 7.282450 CGGGGAGTAACATAAGCTTTATCTTTT 59.718 37.037 3.20 0.00 0.00 2.27
3219 5128 8.967918 GGGGAGTAACATAAGCTTTATCTTTTT 58.032 33.333 3.20 0.00 0.00 1.94
3226 5135 8.635765 ACATAAGCTTTATCTTTTTCTCCACA 57.364 30.769 3.20 0.00 0.00 4.17
3227 5136 9.077885 ACATAAGCTTTATCTTTTTCTCCACAA 57.922 29.630 3.20 0.00 0.00 3.33
3228 5137 9.912634 CATAAGCTTTATCTTTTTCTCCACAAA 57.087 29.630 3.20 0.00 0.00 2.83
3230 5139 6.450545 AGCTTTATCTTTTTCTCCACAAAGC 58.549 36.000 7.45 7.45 44.24 3.51
3231 5140 5.635280 GCTTTATCTTTTTCTCCACAAAGCC 59.365 40.000 0.00 0.00 40.26 4.35
3232 5141 6.517362 GCTTTATCTTTTTCTCCACAAAGCCT 60.517 38.462 0.00 0.00 40.26 4.58
3233 5142 4.861102 ATCTTTTTCTCCACAAAGCCTG 57.139 40.909 0.00 0.00 31.15 4.85
3234 5143 2.958355 TCTTTTTCTCCACAAAGCCTGG 59.042 45.455 0.00 0.00 31.15 4.45
3235 5144 1.039856 TTTTCTCCACAAAGCCTGGC 58.960 50.000 11.65 11.65 0.00 4.85
3236 5145 0.827507 TTTCTCCACAAAGCCTGGCC 60.828 55.000 16.57 0.00 0.00 5.36
3237 5146 2.005606 TTCTCCACAAAGCCTGGCCA 62.006 55.000 16.57 4.71 0.00 5.36
3238 5147 1.531365 CTCCACAAAGCCTGGCCAA 60.531 57.895 16.57 0.00 0.00 4.52
3239 5148 0.901580 CTCCACAAAGCCTGGCCAAT 60.902 55.000 16.57 0.00 0.00 3.16
3240 5149 0.407528 TCCACAAAGCCTGGCCAATA 59.592 50.000 16.57 0.00 0.00 1.90
3241 5150 0.532115 CCACAAAGCCTGGCCAATAC 59.468 55.000 16.57 0.00 0.00 1.89
3242 5151 1.549203 CACAAAGCCTGGCCAATACT 58.451 50.000 16.57 0.59 0.00 2.12
3243 5152 1.203052 CACAAAGCCTGGCCAATACTG 59.797 52.381 16.57 3.31 0.00 2.74
3244 5153 1.075374 ACAAAGCCTGGCCAATACTGA 59.925 47.619 16.57 0.00 0.00 3.41
3245 5154 2.170166 CAAAGCCTGGCCAATACTGAA 58.830 47.619 16.57 0.00 0.00 3.02
3246 5155 1.839424 AAGCCTGGCCAATACTGAAC 58.161 50.000 16.57 0.00 0.00 3.18
3247 5156 0.698238 AGCCTGGCCAATACTGAACA 59.302 50.000 16.57 0.00 0.00 3.18
3248 5157 1.285962 AGCCTGGCCAATACTGAACAT 59.714 47.619 16.57 0.00 0.00 2.71
3249 5158 1.678101 GCCTGGCCAATACTGAACATC 59.322 52.381 7.01 0.00 0.00 3.06
3250 5159 2.684927 GCCTGGCCAATACTGAACATCT 60.685 50.000 7.01 0.00 0.00 2.90
3251 5160 3.624777 CCTGGCCAATACTGAACATCTT 58.375 45.455 7.01 0.00 0.00 2.40
3252 5161 4.780815 CCTGGCCAATACTGAACATCTTA 58.219 43.478 7.01 0.00 0.00 2.10
3253 5162 5.380043 CCTGGCCAATACTGAACATCTTAT 58.620 41.667 7.01 0.00 0.00 1.73
3254 5163 5.829924 CCTGGCCAATACTGAACATCTTATT 59.170 40.000 7.01 0.00 0.00 1.40
3255 5164 6.322201 CCTGGCCAATACTGAACATCTTATTT 59.678 38.462 7.01 0.00 0.00 1.40
3256 5165 7.502226 CCTGGCCAATACTGAACATCTTATTTA 59.498 37.037 7.01 0.00 0.00 1.40
3257 5166 8.995027 TGGCCAATACTGAACATCTTATTTAT 57.005 30.769 0.61 0.00 0.00 1.40
3258 5167 8.849168 TGGCCAATACTGAACATCTTATTTATG 58.151 33.333 0.61 0.00 0.00 1.90
3259 5168 7.809806 GGCCAATACTGAACATCTTATTTATGC 59.190 37.037 0.00 0.00 0.00 3.14
3260 5169 8.571336 GCCAATACTGAACATCTTATTTATGCT 58.429 33.333 0.00 0.00 0.00 3.79
3261 5170 9.888878 CCAATACTGAACATCTTATTTATGCTG 57.111 33.333 0.00 0.00 0.00 4.41
3262 5171 9.888878 CAATACTGAACATCTTATTTATGCTGG 57.111 33.333 0.00 0.00 0.00 4.85
3263 5172 9.851686 AATACTGAACATCTTATTTATGCTGGA 57.148 29.630 0.00 0.00 0.00 3.86
3264 5173 9.851686 ATACTGAACATCTTATTTATGCTGGAA 57.148 29.630 0.00 0.00 0.00 3.53
3265 5174 8.579850 ACTGAACATCTTATTTATGCTGGAAA 57.420 30.769 0.00 0.00 0.00 3.13
3266 5175 9.023962 ACTGAACATCTTATTTATGCTGGAAAA 57.976 29.630 0.00 0.00 0.00 2.29
3267 5176 9.859427 CTGAACATCTTATTTATGCTGGAAAAA 57.141 29.630 0.00 0.00 0.00 1.94
3268 5177 9.859427 TGAACATCTTATTTATGCTGGAAAAAG 57.141 29.630 0.00 0.00 0.00 2.27
3279 5188 9.487790 TTTATGCTGGAAAAAGAAATAAACCAG 57.512 29.630 0.00 0.00 43.98 4.00
3280 5189 6.478512 TGCTGGAAAAAGAAATAAACCAGT 57.521 33.333 0.00 0.00 43.35 4.00
3281 5190 6.279882 TGCTGGAAAAAGAAATAAACCAGTG 58.720 36.000 0.00 0.00 43.35 3.66
3282 5191 6.097554 TGCTGGAAAAAGAAATAAACCAGTGA 59.902 34.615 0.00 0.00 43.35 3.41
3283 5192 6.983890 GCTGGAAAAAGAAATAAACCAGTGAA 59.016 34.615 0.00 0.00 43.35 3.18
3284 5193 7.494298 GCTGGAAAAAGAAATAAACCAGTGAAA 59.506 33.333 0.00 0.00 43.35 2.69
3285 5194 8.940768 TGGAAAAAGAAATAAACCAGTGAAAG 57.059 30.769 0.00 0.00 0.00 2.62
3286 5195 8.754080 TGGAAAAAGAAATAAACCAGTGAAAGA 58.246 29.630 0.00 0.00 0.00 2.52
3287 5196 9.594478 GGAAAAAGAAATAAACCAGTGAAAGAA 57.406 29.630 0.00 0.00 0.00 2.52
3296 5205 8.729805 ATAAACCAGTGAAAGAAATTTTTGCA 57.270 26.923 0.00 0.00 0.00 4.08
3297 5206 7.446001 AAACCAGTGAAAGAAATTTTTGCAA 57.554 28.000 0.00 0.00 0.00 4.08
3298 5207 6.667007 ACCAGTGAAAGAAATTTTTGCAAG 57.333 33.333 0.00 0.00 0.00 4.01
3299 5208 6.405538 ACCAGTGAAAGAAATTTTTGCAAGA 58.594 32.000 0.00 0.00 0.00 3.02
3300 5209 6.313658 ACCAGTGAAAGAAATTTTTGCAAGAC 59.686 34.615 0.00 0.00 0.00 3.01
3301 5210 6.405216 CAGTGAAAGAAATTTTTGCAAGACG 58.595 36.000 0.00 0.00 0.00 4.18
3302 5211 6.034898 CAGTGAAAGAAATTTTTGCAAGACGT 59.965 34.615 0.00 0.00 0.00 4.34
3303 5212 6.034898 AGTGAAAGAAATTTTTGCAAGACGTG 59.965 34.615 0.00 0.00 0.00 4.49
3304 5213 6.034470 GTGAAAGAAATTTTTGCAAGACGTGA 59.966 34.615 0.00 0.00 0.00 4.35
3305 5214 6.756074 TGAAAGAAATTTTTGCAAGACGTGAT 59.244 30.769 0.00 0.00 0.00 3.06
3306 5215 6.753897 AAGAAATTTTTGCAAGACGTGATC 57.246 33.333 0.00 0.00 0.00 2.92
3307 5216 5.222631 AGAAATTTTTGCAAGACGTGATCC 58.777 37.500 0.00 0.00 0.00 3.36
3308 5217 2.679355 TTTTTGCAAGACGTGATCCG 57.321 45.000 0.00 2.55 44.03 4.18
3661 5585 4.080356 TCCTGATAGTGAACCAAGGGAATG 60.080 45.833 0.00 0.00 0.00 2.67
3685 5609 5.733373 GCGTAATGAAATTGGACCAAGATCC 60.733 44.000 13.43 2.78 36.99 3.36
3702 5626 2.336945 TCCGCAGAAGGTACGAGATA 57.663 50.000 0.00 0.00 0.00 1.98
3979 6076 1.846439 TCTTTGGGAATGGCTAGGAGG 59.154 52.381 0.00 0.00 0.00 4.30
3980 6077 0.258774 TTTGGGAATGGCTAGGAGGC 59.741 55.000 0.00 0.00 41.77 4.70
3986 6083 4.040645 TGGCTAGGAGGCAGTCAG 57.959 61.111 0.00 0.00 46.47 3.51
3987 6084 1.388133 TGGCTAGGAGGCAGTCAGA 59.612 57.895 0.00 0.00 46.47 3.27
3989 6086 0.686112 GGCTAGGAGGCAGTCAGACT 60.686 60.000 0.00 0.00 40.97 3.24
4019 6116 0.589223 TTTGTGTCGGTCGATTTGGC 59.411 50.000 0.00 0.00 0.00 4.52
4020 6117 1.231958 TTGTGTCGGTCGATTTGGCC 61.232 55.000 0.00 0.00 0.00 5.36
4021 6118 1.375523 GTGTCGGTCGATTTGGCCT 60.376 57.895 3.32 0.00 0.00 5.19
4023 6120 2.106683 GTCGGTCGATTTGGCCTGG 61.107 63.158 3.32 0.00 0.00 4.45
4025 6122 1.153168 CGGTCGATTTGGCCTGGAT 60.153 57.895 3.32 0.00 0.00 3.41
4026 6123 1.439353 CGGTCGATTTGGCCTGGATG 61.439 60.000 3.32 0.00 0.00 3.51
4107 6204 9.450807 AACAGTTTTTCTCAATAAAACAGATCG 57.549 29.630 12.14 0.00 44.15 3.69
4152 6249 4.473520 CCTGCTACCACCGGCCAG 62.474 72.222 0.00 0.00 0.00 4.85
4225 6322 3.787001 CGCCCTCCCCTCAACCTC 61.787 72.222 0.00 0.00 0.00 3.85
4232 6329 2.352805 CCCTCAACCTCTGCCCAC 59.647 66.667 0.00 0.00 0.00 4.61
4275 6372 1.461075 CCATCCCTCTAGCCCTGCT 60.461 63.158 0.00 0.00 43.41 4.24
4336 6433 1.571773 CCCCCACCCTGAACCCTAAG 61.572 65.000 0.00 0.00 0.00 2.18
4585 7720 7.919621 AGTACTGGAATCGTTATTACTAAGTGC 59.080 37.037 0.00 0.00 0.00 4.40
4678 7814 3.361794 TCTCATACAGATCGCAGCTTC 57.638 47.619 0.00 0.00 0.00 3.86
4853 8151 6.389622 TCGACGAATTCAACATTTCTAGTG 57.610 37.500 6.22 0.00 0.00 2.74
4937 8237 3.288809 TCTCATCGATTAGCATGTCCG 57.711 47.619 0.00 0.00 0.00 4.79
5622 8929 5.992217 ACTTCTACCTTTGTGCTTTCAGTAG 59.008 40.000 0.00 0.00 0.00 2.57
5963 9270 7.191551 AGTTTCATGCATCGTTGATCTATTTG 58.808 34.615 0.00 0.00 0.00 2.32
6295 9623 3.452627 GACTGTCTGGACATGGTAAGGAT 59.547 47.826 3.80 0.00 41.01 3.24
6759 10297 5.250543 TCAAGAATTCTATCCCCTCACAACA 59.749 40.000 8.75 0.00 0.00 3.33
6891 10429 3.491342 AGTCAAAGGAAGGAGAAAAGGC 58.509 45.455 0.00 0.00 0.00 4.35
7680 11310 7.703058 AGGAAATTTGGAATTACTGTACTGG 57.297 36.000 0.00 0.00 0.00 4.00
7698 11329 7.172342 TGTACTGGTTATTATTTTCTGGCTGT 58.828 34.615 0.00 0.00 0.00 4.40
7750 11382 1.164411 GATTTGGTGACCATGTGCGA 58.836 50.000 4.56 0.00 31.53 5.10
7797 11429 3.242739 GCCGTGTCTGCAGTAATATTTGG 60.243 47.826 14.67 7.32 0.00 3.28
7810 11442 7.114811 GCAGTAATATTTGGCATATGGAAAACG 59.885 37.037 4.56 0.00 0.00 3.60
7850 11482 0.666913 TACTCGCTAAGATCCGCCAC 59.333 55.000 0.00 0.00 0.00 5.01
7855 11487 0.107654 GCTAAGATCCGCCACCTTGT 60.108 55.000 0.00 0.00 0.00 3.16
7856 11488 1.941325 CTAAGATCCGCCACCTTGTC 58.059 55.000 0.00 0.00 0.00 3.18
7857 11489 0.539986 TAAGATCCGCCACCTTGTCC 59.460 55.000 0.00 0.00 0.00 4.02
7960 11597 2.358737 GCCCTCCACTCCAACGTG 60.359 66.667 0.00 0.00 34.71 4.49
7975 11612 0.393820 ACGTGCTCCCTCCGTAAAAA 59.606 50.000 0.00 0.00 32.22 1.94
7977 11614 2.234414 ACGTGCTCCCTCCGTAAAAATA 59.766 45.455 0.00 0.00 32.22 1.40
7978 11615 3.264104 CGTGCTCCCTCCGTAAAAATAA 58.736 45.455 0.00 0.00 0.00 1.40
7979 11616 3.875134 CGTGCTCCCTCCGTAAAAATAAT 59.125 43.478 0.00 0.00 0.00 1.28
7980 11617 5.051816 CGTGCTCCCTCCGTAAAAATAATA 58.948 41.667 0.00 0.00 0.00 0.98
7981 11618 5.699458 CGTGCTCCCTCCGTAAAAATAATAT 59.301 40.000 0.00 0.00 0.00 1.28
7982 11619 6.869913 CGTGCTCCCTCCGTAAAAATAATATA 59.130 38.462 0.00 0.00 0.00 0.86
7984 11621 8.718734 GTGCTCCCTCCGTAAAAATAATATAAG 58.281 37.037 0.00 0.00 0.00 1.73
7985 11622 8.653191 TGCTCCCTCCGTAAAAATAATATAAGA 58.347 33.333 0.00 0.00 0.00 2.10
7986 11623 9.498176 GCTCCCTCCGTAAAAATAATATAAGAA 57.502 33.333 0.00 0.00 0.00 2.52
8007 11644 7.171630 AGAACGTTTGGATCATTACTCTAGT 57.828 36.000 0.46 0.00 0.00 2.57
8010 11647 9.530633 GAACGTTTGGATCATTACTCTAGTTAT 57.469 33.333 0.46 0.00 0.00 1.89
8012 11649 8.915036 ACGTTTGGATCATTACTCTAGTTATCT 58.085 33.333 0.00 0.00 0.00 1.98
8040 11677 7.601073 TGCTCTTATATATTTCTTGATGCGG 57.399 36.000 0.00 0.00 0.00 5.69
8041 11678 6.092670 TGCTCTTATATATTTCTTGATGCGGC 59.907 38.462 0.00 0.00 0.00 6.53
8043 11680 7.601073 TCTTATATATTTCTTGATGCGGCTG 57.399 36.000 0.00 0.00 0.00 4.85
8044 11681 4.691860 ATATATTTCTTGATGCGGCTGC 57.308 40.909 11.65 11.65 43.20 5.25
8067 11704 3.910490 GCCGCTGCTCTCTCCGAT 61.910 66.667 0.00 0.00 33.53 4.18
8068 11705 2.334653 CCGCTGCTCTCTCCGATC 59.665 66.667 0.00 0.00 0.00 3.69
8069 11706 2.192861 CCGCTGCTCTCTCCGATCT 61.193 63.158 0.00 0.00 0.00 2.75
8070 11707 1.008652 CGCTGCTCTCTCCGATCTG 60.009 63.158 0.00 0.00 0.00 2.90
8072 11709 1.363443 CTGCTCTCTCCGATCTGCC 59.637 63.158 0.00 0.00 0.00 4.85
8073 11710 2.086251 CTGCTCTCTCCGATCTGCCC 62.086 65.000 0.00 0.00 0.00 5.36
8075 11712 1.805428 GCTCTCTCCGATCTGCCCTC 61.805 65.000 0.00 0.00 0.00 4.30
8076 11713 1.152652 TCTCTCCGATCTGCCCTCC 60.153 63.158 0.00 0.00 0.00 4.30
8077 11714 1.456518 CTCTCCGATCTGCCCTCCA 60.457 63.158 0.00 0.00 0.00 3.86
8078 11715 1.743321 CTCTCCGATCTGCCCTCCAC 61.743 65.000 0.00 0.00 0.00 4.02
8080 11717 1.743321 CTCCGATCTGCCCTCCACTC 61.743 65.000 0.00 0.00 0.00 3.51
8081 11718 2.801631 CCGATCTGCCCTCCACTCC 61.802 68.421 0.00 0.00 0.00 3.85
8082 11719 2.801631 CGATCTGCCCTCCACTCCC 61.802 68.421 0.00 0.00 0.00 4.30
8083 11720 1.690633 GATCTGCCCTCCACTCCCA 60.691 63.158 0.00 0.00 0.00 4.37
8085 11722 4.087892 CTGCCCTCCACTCCCACG 62.088 72.222 0.00 0.00 0.00 4.94
8086 11723 4.954118 TGCCCTCCACTCCCACGT 62.954 66.667 0.00 0.00 0.00 4.49
8087 11724 2.682494 GCCCTCCACTCCCACGTA 60.682 66.667 0.00 0.00 0.00 3.57
8088 11725 3.015312 GCCCTCCACTCCCACGTAC 62.015 68.421 0.00 0.00 0.00 3.67
8089 11726 1.305046 CCCTCCACTCCCACGTACT 60.305 63.158 0.00 0.00 0.00 2.73
8090 11727 1.321074 CCCTCCACTCCCACGTACTC 61.321 65.000 0.00 0.00 0.00 2.59
8091 11728 1.321074 CCTCCACTCCCACGTACTCC 61.321 65.000 0.00 0.00 0.00 3.85
8094 11731 1.321074 CCACTCCCACGTACTCCCTC 61.321 65.000 0.00 0.00 0.00 4.30
8095 11732 1.000107 ACTCCCACGTACTCCCTCC 60.000 63.158 0.00 0.00 0.00 4.30
8147 14981 8.982091 TCACTACTCTAGTTATCTACATGCTT 57.018 34.615 0.00 0.00 36.76 3.91
8208 15044 7.928307 TTTACTGGAGTTAGACAGTACGTAT 57.072 36.000 0.00 0.00 46.49 3.06
8347 15183 6.099701 ACAGACACCAGCCATAACTCAATATA 59.900 38.462 0.00 0.00 0.00 0.86
8348 15184 6.992123 CAGACACCAGCCATAACTCAATATAA 59.008 38.462 0.00 0.00 0.00 0.98
8349 15185 7.172190 CAGACACCAGCCATAACTCAATATAAG 59.828 40.741 0.00 0.00 0.00 1.73
8350 15186 7.071196 AGACACCAGCCATAACTCAATATAAGA 59.929 37.037 0.00 0.00 0.00 2.10
8351 15187 6.992715 ACACCAGCCATAACTCAATATAAGAC 59.007 38.462 0.00 0.00 0.00 3.01
8352 15188 6.992123 CACCAGCCATAACTCAATATAAGACA 59.008 38.462 0.00 0.00 0.00 3.41
8353 15189 7.498900 CACCAGCCATAACTCAATATAAGACAA 59.501 37.037 0.00 0.00 0.00 3.18
8354 15190 7.716998 ACCAGCCATAACTCAATATAAGACAAG 59.283 37.037 0.00 0.00 0.00 3.16
8355 15191 7.173907 CCAGCCATAACTCAATATAAGACAAGG 59.826 40.741 0.00 0.00 0.00 3.61
8356 15192 6.712547 AGCCATAACTCAATATAAGACAAGGC 59.287 38.462 0.00 0.00 35.26 4.35
8357 15193 6.712547 GCCATAACTCAATATAAGACAAGGCT 59.287 38.462 0.00 0.00 32.49 4.58
8358 15194 7.308229 GCCATAACTCAATATAAGACAAGGCTG 60.308 40.741 0.00 0.00 32.49 4.85
8359 15195 7.933577 CCATAACTCAATATAAGACAAGGCTGA 59.066 37.037 0.00 0.00 0.00 4.26
8360 15196 9.330063 CATAACTCAATATAAGACAAGGCTGAA 57.670 33.333 0.00 0.00 0.00 3.02
8361 15197 9.905713 ATAACTCAATATAAGACAAGGCTGAAA 57.094 29.630 0.00 0.00 0.00 2.69
8362 15198 8.635765 AACTCAATATAAGACAAGGCTGAAAA 57.364 30.769 0.00 0.00 0.00 2.29
8363 15199 8.635765 ACTCAATATAAGACAAGGCTGAAAAA 57.364 30.769 0.00 0.00 0.00 1.94
8509 15352 5.584649 ACATTCGTATGTGGTAGTCCATTTG 59.415 40.000 6.89 0.00 46.20 2.32
8635 15478 9.778741 ATATTCACCATAAATATTGACGACTGT 57.221 29.630 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
274 281 3.318886 TCAATTTGTTCGTGCGCTACTA 58.681 40.909 9.73 0.00 0.00 1.82
388 397 4.201561 CGCATACGATGATCATAGTGCTTG 60.202 45.833 26.14 20.73 43.93 4.01
446 459 7.483307 AGTCCATGTATTGTATTTCAACATGC 58.517 34.615 7.97 0.00 40.81 4.06
559 572 5.050295 CGAAATTATTCCTTCGAGGCCTTAC 60.050 44.000 6.77 0.00 45.65 2.34
607 620 8.055279 TGCTGCTTGCTTATAAACTCTAAAAT 57.945 30.769 0.00 0.00 43.37 1.82
730 750 2.022623 CGAGAGCGACTCAGAGCG 59.977 66.667 12.77 3.63 45.14 5.03
986 2324 3.554692 GCATCGTCACCGCGAAGG 61.555 66.667 8.23 0.00 44.38 3.46
1054 2392 0.178891 AGGAGAAGAGGTGAAGGGCA 60.179 55.000 0.00 0.00 0.00 5.36
1164 2502 3.444029 GTTACTACCCAGTACCCAGGAA 58.556 50.000 0.68 0.00 36.98 3.36
1300 2638 5.209659 CTGTCAGGATTAGGGGTTAGTAGT 58.790 45.833 0.00 0.00 0.00 2.73
1624 2974 1.449246 GAGATCGCAAGGTGCAGCT 60.449 57.895 13.85 13.85 45.36 4.24
1930 3297 1.202687 CCCACGTACATGCCATGATCT 60.203 52.381 12.53 0.00 0.00 2.75
1941 3308 1.418637 AGCTCTTTTTCCCCACGTACA 59.581 47.619 0.00 0.00 0.00 2.90
1957 3325 2.289756 ACCGAGAGAAAAAGGGAAGCTC 60.290 50.000 0.00 0.00 0.00 4.09
1962 3330 2.326428 ACTGACCGAGAGAAAAAGGGA 58.674 47.619 0.00 0.00 0.00 4.20
2139 3510 4.730487 GCAGTGGCTCAGGAACAT 57.270 55.556 0.00 0.00 36.96 2.71
2151 3522 2.072298 GCACTTCTAGGTTCAGCAGTG 58.928 52.381 0.00 0.00 41.14 3.66
2152 3523 1.694150 TGCACTTCTAGGTTCAGCAGT 59.306 47.619 0.00 0.00 0.00 4.40
2157 3528 2.158827 TGCTTGTGCACTTCTAGGTTCA 60.159 45.455 19.41 1.85 45.31 3.18
2162 3533 1.463831 CAGCTGCTTGTGCACTTCTAG 59.536 52.381 19.41 12.15 45.31 2.43
2193 3564 3.825160 GAACGTGCTGCTCCACCCA 62.825 63.158 0.00 0.00 32.10 4.51
2202 3573 3.499737 GATGGGGCGAACGTGCTG 61.500 66.667 0.00 0.00 34.52 4.41
2208 3579 0.966179 AAAACCTTGATGGGGCGAAC 59.034 50.000 0.00 0.00 41.11 3.95
2209 3580 1.710816 AAAAACCTTGATGGGGCGAA 58.289 45.000 0.00 0.00 41.11 4.70
2210 3581 2.164338 GTAAAAACCTTGATGGGGCGA 58.836 47.619 0.00 0.00 41.11 5.54
2221 3598 6.426025 GGTAGTCATCGTTCTTGTAAAAACCT 59.574 38.462 0.00 0.00 0.00 3.50
2237 3614 2.035632 AGTAGCCAGCAGGTAGTCATC 58.964 52.381 0.00 0.00 37.19 2.92
2676 4062 6.061441 AGACACATAAACAACAGGATCAACA 58.939 36.000 0.00 0.00 0.00 3.33
2678 4064 7.450074 AGTAGACACATAAACAACAGGATCAA 58.550 34.615 0.00 0.00 0.00 2.57
2692 4078 6.709397 CGAAGGGAGTACATAGTAGACACATA 59.291 42.308 0.00 0.00 0.00 2.29
2698 4286 7.341805 AGTTTACGAAGGGAGTACATAGTAGA 58.658 38.462 0.00 0.00 0.00 2.59
2744 4332 8.828688 AAGAGCGTTTAAATCACTACTTTAGT 57.171 30.769 0.00 0.00 40.28 2.24
2763 4413 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
2777 4427 7.715249 GCAATAATCATGTACTCCCTCTGTAAA 59.285 37.037 0.00 0.00 0.00 2.01
2779 4429 6.326323 TGCAATAATCATGTACTCCCTCTGTA 59.674 38.462 0.00 0.00 0.00 2.74
2782 4432 5.455326 GGTGCAATAATCATGTACTCCCTCT 60.455 44.000 0.00 0.00 34.35 3.69
2869 4537 6.022315 AGCTAGGGAGTATCAAATAGAGCAT 58.978 40.000 0.00 0.00 36.25 3.79
2929 4835 0.887387 GCCAAAGCTTCACCCGTACA 60.887 55.000 0.00 0.00 35.50 2.90
2954 4860 0.468648 GCTTATGTTACTCCCCGCCT 59.531 55.000 0.00 0.00 0.00 5.52
2995 4904 6.949352 ATAAGATGTTCAGTATTGGCCAAG 57.051 37.500 24.94 10.32 0.00 3.61
3076 4985 9.102453 GATTCCCCTGTTAATCCTAGTACTAAT 57.898 37.037 3.76 0.00 0.00 1.73
3077 4986 7.232127 CGATTCCCCTGTTAATCCTAGTACTAA 59.768 40.741 3.76 0.00 0.00 2.24
3078 4987 6.718454 CGATTCCCCTGTTAATCCTAGTACTA 59.282 42.308 1.89 1.89 0.00 1.82
3079 4988 5.539193 CGATTCCCCTGTTAATCCTAGTACT 59.461 44.000 0.00 0.00 0.00 2.73
3080 4989 5.537674 TCGATTCCCCTGTTAATCCTAGTAC 59.462 44.000 0.00 0.00 0.00 2.73
3081 4990 5.708544 TCGATTCCCCTGTTAATCCTAGTA 58.291 41.667 0.00 0.00 0.00 1.82
3082 4991 4.553678 TCGATTCCCCTGTTAATCCTAGT 58.446 43.478 0.00 0.00 0.00 2.57
3083 4992 5.482908 CATCGATTCCCCTGTTAATCCTAG 58.517 45.833 0.00 0.00 0.00 3.02
3084 4993 4.262894 GCATCGATTCCCCTGTTAATCCTA 60.263 45.833 0.00 0.00 0.00 2.94
3085 4994 3.496870 GCATCGATTCCCCTGTTAATCCT 60.497 47.826 0.00 0.00 0.00 3.24
3086 4995 2.814336 GCATCGATTCCCCTGTTAATCC 59.186 50.000 0.00 0.00 0.00 3.01
3087 4996 3.744660 AGCATCGATTCCCCTGTTAATC 58.255 45.455 0.00 0.00 0.00 1.75
3088 4997 3.392616 AGAGCATCGATTCCCCTGTTAAT 59.607 43.478 0.00 0.00 42.67 1.40
3089 4998 2.771943 AGAGCATCGATTCCCCTGTTAA 59.228 45.455 0.00 0.00 42.67 2.01
3090 4999 2.398588 AGAGCATCGATTCCCCTGTTA 58.601 47.619 0.00 0.00 42.67 2.41
3091 5000 1.207791 AGAGCATCGATTCCCCTGTT 58.792 50.000 0.00 0.00 42.67 3.16
3092 5001 2.088104 TAGAGCATCGATTCCCCTGT 57.912 50.000 0.00 0.00 42.67 4.00
3093 5002 3.692257 AATAGAGCATCGATTCCCCTG 57.308 47.619 0.00 0.00 35.44 4.45
3094 5003 3.648067 TCAAATAGAGCATCGATTCCCCT 59.352 43.478 0.00 0.00 39.59 4.79
3095 5004 4.008074 TCAAATAGAGCATCGATTCCCC 57.992 45.455 0.00 0.00 39.59 4.81
3096 5005 6.402222 AGTATCAAATAGAGCATCGATTCCC 58.598 40.000 0.00 0.00 39.59 3.97
3097 5006 6.533367 GGAGTATCAAATAGAGCATCGATTCC 59.467 42.308 0.00 0.00 39.59 3.01
3098 5007 6.533367 GGGAGTATCAAATAGAGCATCGATTC 59.467 42.308 0.00 0.00 39.59 2.52
3099 5008 6.212388 AGGGAGTATCAAATAGAGCATCGATT 59.788 38.462 0.00 0.00 42.38 3.34
3100 5009 5.719085 AGGGAGTATCAAATAGAGCATCGAT 59.281 40.000 0.00 0.00 37.10 3.59
3101 5010 5.080337 AGGGAGTATCAAATAGAGCATCGA 58.920 41.667 0.00 0.00 37.10 3.59
3102 5011 5.398603 AGGGAGTATCAAATAGAGCATCG 57.601 43.478 0.00 0.00 37.10 3.84
3103 5012 6.154363 AGCTAGGGAGTATCAAATAGAGCATC 59.846 42.308 0.00 0.00 36.25 3.91
3104 5013 6.022315 AGCTAGGGAGTATCAAATAGAGCAT 58.978 40.000 0.00 0.00 36.25 3.79
3105 5014 5.398236 AGCTAGGGAGTATCAAATAGAGCA 58.602 41.667 0.00 0.00 36.25 4.26
3106 5015 5.993748 AGCTAGGGAGTATCAAATAGAGC 57.006 43.478 0.00 0.00 36.25 4.09
3113 5022 9.601810 TCAATCTAATTAGCTAGGGAGTATCAA 57.398 33.333 7.67 0.00 36.25 2.57
3114 5023 9.601810 TTCAATCTAATTAGCTAGGGAGTATCA 57.398 33.333 7.67 0.00 36.25 2.15
3116 5025 9.830186 TCTTCAATCTAATTAGCTAGGGAGTAT 57.170 33.333 7.67 0.00 0.00 2.12
3117 5026 9.830186 ATCTTCAATCTAATTAGCTAGGGAGTA 57.170 33.333 7.67 0.00 0.00 2.59
3118 5027 8.592809 CATCTTCAATCTAATTAGCTAGGGAGT 58.407 37.037 7.67 0.00 0.00 3.85
3119 5028 8.592809 ACATCTTCAATCTAATTAGCTAGGGAG 58.407 37.037 7.67 2.19 0.00 4.30
3120 5029 8.497910 ACATCTTCAATCTAATTAGCTAGGGA 57.502 34.615 7.67 2.74 0.00 4.20
3121 5030 8.997323 CAACATCTTCAATCTAATTAGCTAGGG 58.003 37.037 7.67 0.00 0.00 3.53
3122 5031 8.997323 CCAACATCTTCAATCTAATTAGCTAGG 58.003 37.037 7.67 0.00 0.00 3.02
3123 5032 9.770097 TCCAACATCTTCAATCTAATTAGCTAG 57.230 33.333 7.67 0.21 0.00 3.42
3125 5034 8.897752 GTTCCAACATCTTCAATCTAATTAGCT 58.102 33.333 7.67 0.00 0.00 3.32
3126 5035 8.131731 GGTTCCAACATCTTCAATCTAATTAGC 58.868 37.037 7.67 0.00 0.00 3.09
3127 5036 9.177608 TGGTTCCAACATCTTCAATCTAATTAG 57.822 33.333 6.11 6.11 0.00 1.73
3128 5037 9.527157 TTGGTTCCAACATCTTCAATCTAATTA 57.473 29.630 0.00 0.00 0.00 1.40
3129 5038 8.421249 TTGGTTCCAACATCTTCAATCTAATT 57.579 30.769 0.00 0.00 0.00 1.40
3130 5039 8.306761 GTTTGGTTCCAACATCTTCAATCTAAT 58.693 33.333 3.56 0.00 0.00 1.73
3131 5040 7.521423 CGTTTGGTTCCAACATCTTCAATCTAA 60.521 37.037 3.56 0.00 0.00 2.10
3132 5041 6.072728 CGTTTGGTTCCAACATCTTCAATCTA 60.073 38.462 3.56 0.00 0.00 1.98
3133 5042 5.278463 CGTTTGGTTCCAACATCTTCAATCT 60.278 40.000 3.56 0.00 0.00 2.40
3134 5043 4.917415 CGTTTGGTTCCAACATCTTCAATC 59.083 41.667 3.56 0.00 0.00 2.67
3135 5044 4.261994 CCGTTTGGTTCCAACATCTTCAAT 60.262 41.667 3.56 0.00 0.00 2.57
3136 5045 3.067461 CCGTTTGGTTCCAACATCTTCAA 59.933 43.478 3.56 0.00 0.00 2.69
3137 5046 2.621055 CCGTTTGGTTCCAACATCTTCA 59.379 45.455 3.56 0.00 0.00 3.02
3138 5047 3.282831 CCGTTTGGTTCCAACATCTTC 57.717 47.619 3.56 0.00 0.00 2.87
3152 5061 1.957877 ACCCATACAACCAACCGTTTG 59.042 47.619 0.00 0.00 29.93 2.93
3153 5062 1.957877 CACCCATACAACCAACCGTTT 59.042 47.619 0.00 0.00 29.93 3.60
3154 5063 1.143277 TCACCCATACAACCAACCGTT 59.857 47.619 0.00 0.00 33.90 4.44
3155 5064 0.766131 TCACCCATACAACCAACCGT 59.234 50.000 0.00 0.00 0.00 4.83
3156 5065 1.810151 CTTCACCCATACAACCAACCG 59.190 52.381 0.00 0.00 0.00 4.44
3157 5066 1.544246 GCTTCACCCATACAACCAACC 59.456 52.381 0.00 0.00 0.00 3.77
3158 5067 2.514803 AGCTTCACCCATACAACCAAC 58.485 47.619 0.00 0.00 0.00 3.77
3159 5068 2.969821 AGCTTCACCCATACAACCAA 57.030 45.000 0.00 0.00 0.00 3.67
3160 5069 2.890311 CAAAGCTTCACCCATACAACCA 59.110 45.455 0.00 0.00 0.00 3.67
3161 5070 2.231235 CCAAAGCTTCACCCATACAACC 59.769 50.000 0.00 0.00 0.00 3.77
3162 5071 2.352715 GCCAAAGCTTCACCCATACAAC 60.353 50.000 0.00 0.00 35.50 3.32
3163 5072 1.892474 GCCAAAGCTTCACCCATACAA 59.108 47.619 0.00 0.00 35.50 2.41
3164 5073 1.544724 GCCAAAGCTTCACCCATACA 58.455 50.000 0.00 0.00 35.50 2.29
3176 5085 2.700773 CCGCCTACCAAGCCAAAGC 61.701 63.158 0.00 0.00 40.32 3.51
3177 5086 2.046285 CCCGCCTACCAAGCCAAAG 61.046 63.158 0.00 0.00 0.00 2.77
3178 5087 2.034999 CCCGCCTACCAAGCCAAA 59.965 61.111 0.00 0.00 0.00 3.28
3179 5088 4.041762 CCCCGCCTACCAAGCCAA 62.042 66.667 0.00 0.00 0.00 4.52
3181 5090 4.176752 CTCCCCGCCTACCAAGCC 62.177 72.222 0.00 0.00 0.00 4.35
3182 5091 1.619807 TTACTCCCCGCCTACCAAGC 61.620 60.000 0.00 0.00 0.00 4.01
3183 5092 0.177373 GTTACTCCCCGCCTACCAAG 59.823 60.000 0.00 0.00 0.00 3.61
3184 5093 0.544833 TGTTACTCCCCGCCTACCAA 60.545 55.000 0.00 0.00 0.00 3.67
3185 5094 0.325860 ATGTTACTCCCCGCCTACCA 60.326 55.000 0.00 0.00 0.00 3.25
3186 5095 1.708341 TATGTTACTCCCCGCCTACC 58.292 55.000 0.00 0.00 0.00 3.18
3187 5096 2.547430 GCTTATGTTACTCCCCGCCTAC 60.547 54.545 0.00 0.00 0.00 3.18
3188 5097 1.690352 GCTTATGTTACTCCCCGCCTA 59.310 52.381 0.00 0.00 0.00 3.93
3189 5098 0.468648 GCTTATGTTACTCCCCGCCT 59.531 55.000 0.00 0.00 0.00 5.52
3190 5099 0.468648 AGCTTATGTTACTCCCCGCC 59.531 55.000 0.00 0.00 0.00 6.13
3191 5100 2.327200 AAGCTTATGTTACTCCCCGC 57.673 50.000 0.00 0.00 0.00 6.13
3192 5101 5.855045 AGATAAAGCTTATGTTACTCCCCG 58.145 41.667 0.00 0.00 0.00 5.73
3193 5102 8.521170 AAAAGATAAAGCTTATGTTACTCCCC 57.479 34.615 0.00 0.00 0.00 4.81
3200 5109 9.077885 TGTGGAGAAAAAGATAAAGCTTATGTT 57.922 29.630 0.00 0.00 0.00 2.71
3201 5110 8.635765 TGTGGAGAAAAAGATAAAGCTTATGT 57.364 30.769 0.00 0.00 0.00 2.29
3202 5111 9.912634 TTTGTGGAGAAAAAGATAAAGCTTATG 57.087 29.630 0.00 0.00 0.00 1.90
3204 5113 8.082242 GCTTTGTGGAGAAAAAGATAAAGCTTA 58.918 33.333 0.00 0.00 43.06 3.09
3205 5114 6.925718 GCTTTGTGGAGAAAAAGATAAAGCTT 59.074 34.615 0.00 0.00 43.06 3.74
3206 5115 6.450545 GCTTTGTGGAGAAAAAGATAAAGCT 58.549 36.000 0.00 0.00 43.06 3.74
3207 5116 5.635280 GGCTTTGTGGAGAAAAAGATAAAGC 59.365 40.000 0.00 0.00 44.66 3.51
3208 5117 6.865205 CAGGCTTTGTGGAGAAAAAGATAAAG 59.135 38.462 0.00 0.00 35.79 1.85
3209 5118 6.239289 CCAGGCTTTGTGGAGAAAAAGATAAA 60.239 38.462 0.00 0.00 37.23 1.40
3210 5119 5.243730 CCAGGCTTTGTGGAGAAAAAGATAA 59.756 40.000 0.00 0.00 37.23 1.75
3211 5120 4.766891 CCAGGCTTTGTGGAGAAAAAGATA 59.233 41.667 0.00 0.00 37.23 1.98
3212 5121 3.575687 CCAGGCTTTGTGGAGAAAAAGAT 59.424 43.478 0.00 0.00 37.23 2.40
3213 5122 2.958355 CCAGGCTTTGTGGAGAAAAAGA 59.042 45.455 0.00 0.00 37.23 2.52
3214 5123 2.546584 GCCAGGCTTTGTGGAGAAAAAG 60.547 50.000 3.29 0.00 37.23 2.27
3215 5124 1.412343 GCCAGGCTTTGTGGAGAAAAA 59.588 47.619 3.29 0.00 37.23 1.94
3216 5125 1.039856 GCCAGGCTTTGTGGAGAAAA 58.960 50.000 3.29 0.00 37.23 2.29
3217 5126 0.827507 GGCCAGGCTTTGTGGAGAAA 60.828 55.000 12.43 0.00 37.23 2.52
3218 5127 1.228552 GGCCAGGCTTTGTGGAGAA 60.229 57.895 12.43 0.00 37.23 2.87
3219 5128 2.005606 TTGGCCAGGCTTTGTGGAGA 62.006 55.000 12.43 0.00 37.23 3.71
3220 5129 0.901580 ATTGGCCAGGCTTTGTGGAG 60.902 55.000 12.43 0.00 37.23 3.86
3221 5130 0.407528 TATTGGCCAGGCTTTGTGGA 59.592 50.000 12.43 0.00 37.23 4.02
3222 5131 0.532115 GTATTGGCCAGGCTTTGTGG 59.468 55.000 12.43 0.00 38.21 4.17
3223 5132 1.203052 CAGTATTGGCCAGGCTTTGTG 59.797 52.381 12.43 0.00 0.00 3.33
3224 5133 1.075374 TCAGTATTGGCCAGGCTTTGT 59.925 47.619 12.43 0.00 0.00 2.83
3225 5134 1.838112 TCAGTATTGGCCAGGCTTTG 58.162 50.000 12.43 2.68 0.00 2.77
3226 5135 2.171003 GTTCAGTATTGGCCAGGCTTT 58.829 47.619 12.43 0.00 0.00 3.51
3227 5136 1.075374 TGTTCAGTATTGGCCAGGCTT 59.925 47.619 12.43 0.00 0.00 4.35
3228 5137 0.698238 TGTTCAGTATTGGCCAGGCT 59.302 50.000 12.43 2.39 0.00 4.58
3229 5138 1.678101 GATGTTCAGTATTGGCCAGGC 59.322 52.381 5.11 1.26 0.00 4.85
3230 5139 3.287867 AGATGTTCAGTATTGGCCAGG 57.712 47.619 5.11 0.00 0.00 4.45
3231 5140 6.949352 AATAAGATGTTCAGTATTGGCCAG 57.051 37.500 5.11 0.00 0.00 4.85
3232 5141 8.849168 CATAAATAAGATGTTCAGTATTGGCCA 58.151 33.333 0.00 0.00 0.00 5.36
3233 5142 7.809806 GCATAAATAAGATGTTCAGTATTGGCC 59.190 37.037 0.00 0.00 0.00 5.36
3234 5143 8.571336 AGCATAAATAAGATGTTCAGTATTGGC 58.429 33.333 0.00 0.00 0.00 4.52
3235 5144 9.888878 CAGCATAAATAAGATGTTCAGTATTGG 57.111 33.333 0.00 0.00 0.00 3.16
3236 5145 9.888878 CCAGCATAAATAAGATGTTCAGTATTG 57.111 33.333 0.00 0.00 0.00 1.90
3237 5146 9.851686 TCCAGCATAAATAAGATGTTCAGTATT 57.148 29.630 0.00 0.00 0.00 1.89
3238 5147 9.851686 TTCCAGCATAAATAAGATGTTCAGTAT 57.148 29.630 0.00 0.00 0.00 2.12
3239 5148 9.679661 TTTCCAGCATAAATAAGATGTTCAGTA 57.320 29.630 0.00 0.00 0.00 2.74
3240 5149 8.579850 TTTCCAGCATAAATAAGATGTTCAGT 57.420 30.769 0.00 0.00 0.00 3.41
3241 5150 9.859427 TTTTTCCAGCATAAATAAGATGTTCAG 57.141 29.630 0.00 0.00 0.00 3.02
3242 5151 9.859427 CTTTTTCCAGCATAAATAAGATGTTCA 57.141 29.630 0.00 0.00 0.00 3.18
3253 5162 9.487790 CTGGTTTATTTCTTTTTCCAGCATAAA 57.512 29.630 0.00 0.00 35.37 1.40
3254 5163 8.646900 ACTGGTTTATTTCTTTTTCCAGCATAA 58.353 29.630 8.01 0.00 42.98 1.90
3255 5164 8.087750 CACTGGTTTATTTCTTTTTCCAGCATA 58.912 33.333 8.01 0.00 42.98 3.14
3256 5165 6.930722 CACTGGTTTATTTCTTTTTCCAGCAT 59.069 34.615 8.01 0.00 42.98 3.79
3257 5166 6.097554 TCACTGGTTTATTTCTTTTTCCAGCA 59.902 34.615 8.01 0.00 42.98 4.41
3258 5167 6.512297 TCACTGGTTTATTTCTTTTTCCAGC 58.488 36.000 8.01 0.00 42.98 4.85
3259 5168 8.940768 TTTCACTGGTTTATTTCTTTTTCCAG 57.059 30.769 0.00 0.00 44.23 3.86
3260 5169 8.754080 TCTTTCACTGGTTTATTTCTTTTTCCA 58.246 29.630 0.00 0.00 0.00 3.53
3261 5170 9.594478 TTCTTTCACTGGTTTATTTCTTTTTCC 57.406 29.630 0.00 0.00 0.00 3.13
3270 5179 9.171877 TGCAAAAATTTCTTTCACTGGTTTATT 57.828 25.926 0.00 0.00 0.00 1.40
3271 5180 8.729805 TGCAAAAATTTCTTTCACTGGTTTAT 57.270 26.923 0.00 0.00 0.00 1.40
3272 5181 8.553459 TTGCAAAAATTTCTTTCACTGGTTTA 57.447 26.923 0.00 0.00 0.00 2.01
3273 5182 7.390162 TCTTGCAAAAATTTCTTTCACTGGTTT 59.610 29.630 0.00 0.00 0.00 3.27
3274 5183 6.878389 TCTTGCAAAAATTTCTTTCACTGGTT 59.122 30.769 0.00 0.00 0.00 3.67
3275 5184 6.313658 GTCTTGCAAAAATTTCTTTCACTGGT 59.686 34.615 0.00 0.00 0.00 4.00
3276 5185 6.508404 CGTCTTGCAAAAATTTCTTTCACTGG 60.508 38.462 0.00 0.00 0.00 4.00
3277 5186 6.034898 ACGTCTTGCAAAAATTTCTTTCACTG 59.965 34.615 0.00 0.00 0.00 3.66
3278 5187 6.034898 CACGTCTTGCAAAAATTTCTTTCACT 59.965 34.615 0.00 0.00 0.00 3.41
3279 5188 6.034470 TCACGTCTTGCAAAAATTTCTTTCAC 59.966 34.615 0.00 0.00 0.00 3.18
3280 5189 6.096036 TCACGTCTTGCAAAAATTTCTTTCA 58.904 32.000 0.00 0.00 0.00 2.69
3281 5190 6.567769 TCACGTCTTGCAAAAATTTCTTTC 57.432 33.333 0.00 0.00 0.00 2.62
3282 5191 6.200854 GGATCACGTCTTGCAAAAATTTCTTT 59.799 34.615 0.00 0.00 0.00 2.52
3283 5192 5.691754 GGATCACGTCTTGCAAAAATTTCTT 59.308 36.000 0.00 0.00 0.00 2.52
3284 5193 5.222631 GGATCACGTCTTGCAAAAATTTCT 58.777 37.500 0.00 0.00 0.00 2.52
3285 5194 4.088496 CGGATCACGTCTTGCAAAAATTTC 59.912 41.667 0.00 0.00 37.93 2.17
3286 5195 3.980775 CGGATCACGTCTTGCAAAAATTT 59.019 39.130 0.00 0.00 37.93 1.82
3287 5196 3.564511 CGGATCACGTCTTGCAAAAATT 58.435 40.909 0.00 0.00 37.93 1.82
3288 5197 3.201726 CGGATCACGTCTTGCAAAAAT 57.798 42.857 0.00 0.00 37.93 1.82
3289 5198 2.679355 CGGATCACGTCTTGCAAAAA 57.321 45.000 0.00 0.00 37.93 1.94
3301 5210 9.978044 AAAATCCTAGTACTAATTACGGATCAC 57.022 33.333 16.80 0.00 32.51 3.06
3302 5211 9.976511 CAAAATCCTAGTACTAATTACGGATCA 57.023 33.333 16.80 0.00 32.51 2.92
3303 5212 9.420551 CCAAAATCCTAGTACTAATTACGGATC 57.579 37.037 16.80 0.00 32.51 3.36
3304 5213 8.931568 ACCAAAATCCTAGTACTAATTACGGAT 58.068 33.333 12.63 12.63 34.18 4.18
3305 5214 8.310122 ACCAAAATCCTAGTACTAATTACGGA 57.690 34.615 15.44 12.98 35.61 4.69
3306 5215 7.380602 CGACCAAAATCCTAGTACTAATTACGG 59.619 40.741 3.76 8.23 35.61 4.02
3307 5216 7.380602 CCGACCAAAATCCTAGTACTAATTACG 59.619 40.741 3.76 4.70 35.61 3.18
3308 5217 8.416329 TCCGACCAAAATCCTAGTACTAATTAC 58.584 37.037 3.76 0.00 0.00 1.89
3309 5218 8.537728 TCCGACCAAAATCCTAGTACTAATTA 57.462 34.615 3.76 0.00 0.00 1.40
3310 5219 7.427989 TCCGACCAAAATCCTAGTACTAATT 57.572 36.000 3.76 0.00 0.00 1.40
3661 5585 4.695217 TCTTGGTCCAATTTCATTACGC 57.305 40.909 4.34 0.00 0.00 4.42
3685 5609 3.243101 ACATGTATCTCGTACCTTCTGCG 60.243 47.826 0.00 0.00 32.03 5.18
3702 5626 7.285401 ACCAACAAGATAAACAGAGAAACATGT 59.715 33.333 0.00 0.00 0.00 3.21
3979 6076 2.953020 ACGAGATTTCAGTCTGACTGC 58.047 47.619 28.56 16.67 45.54 4.40
3981 6078 5.235186 CACAAAACGAGATTTCAGTCTGACT 59.765 40.000 4.06 4.06 0.00 3.41
3982 6079 5.006746 ACACAAAACGAGATTTCAGTCTGAC 59.993 40.000 0.78 0.00 0.00 3.51
3984 6081 5.409643 ACACAAAACGAGATTTCAGTCTG 57.590 39.130 0.00 0.00 0.00 3.51
3985 6082 4.209288 CGACACAAAACGAGATTTCAGTCT 59.791 41.667 0.00 0.00 0.00 3.24
3986 6083 4.446234 CGACACAAAACGAGATTTCAGTC 58.554 43.478 0.00 0.00 0.00 3.51
3987 6084 3.247648 CCGACACAAAACGAGATTTCAGT 59.752 43.478 0.00 0.00 0.00 3.41
3989 6086 3.199677 ACCGACACAAAACGAGATTTCA 58.800 40.909 0.00 0.00 0.00 2.69
3990 6087 3.660904 CGACCGACACAAAACGAGATTTC 60.661 47.826 0.00 0.00 0.00 2.17
3991 6088 2.220133 CGACCGACACAAAACGAGATTT 59.780 45.455 0.00 0.00 0.00 2.17
3992 6089 1.790623 CGACCGACACAAAACGAGATT 59.209 47.619 0.00 0.00 0.00 2.40
3993 6090 1.001048 TCGACCGACACAAAACGAGAT 60.001 47.619 0.00 0.00 0.00 2.75
3995 6092 1.415374 ATCGACCGACACAAAACGAG 58.585 50.000 0.00 0.00 33.58 4.18
3997 6094 2.294829 CAAATCGACCGACACAAAACG 58.705 47.619 0.00 0.00 0.00 3.60
3999 6096 1.002251 GCCAAATCGACCGACACAAAA 60.002 47.619 0.00 0.00 0.00 2.44
4000 6097 0.589223 GCCAAATCGACCGACACAAA 59.411 50.000 0.00 0.00 0.00 2.83
4019 6116 2.322355 ACGCTTCAGATTCATCCAGG 57.678 50.000 0.00 0.00 0.00 4.45
4020 6117 2.353889 CCAACGCTTCAGATTCATCCAG 59.646 50.000 0.00 0.00 0.00 3.86
4021 6118 2.027285 TCCAACGCTTCAGATTCATCCA 60.027 45.455 0.00 0.00 0.00 3.41
4023 6120 5.292765 TCTATCCAACGCTTCAGATTCATC 58.707 41.667 0.00 0.00 0.00 2.92
4025 6122 4.736126 TCTATCCAACGCTTCAGATTCA 57.264 40.909 0.00 0.00 0.00 2.57
4026 6123 6.251549 GTTTTCTATCCAACGCTTCAGATTC 58.748 40.000 0.00 0.00 0.00 2.52
4107 6204 1.809684 CGGAGGAAGAAGAAACACCC 58.190 55.000 0.00 0.00 0.00 4.61
4275 6372 3.388024 CCGGAGATGAAAACTAGATGGGA 59.612 47.826 0.00 0.00 0.00 4.37
4336 6433 4.759782 CCGTCATCACCCCATTATCTATC 58.240 47.826 0.00 0.00 0.00 2.08
4365 6462 4.214327 GCCTCGCCGGAGAGAAGG 62.214 72.222 33.72 20.60 43.27 3.46
4474 6575 1.269726 GGGACAAACCACACTGCAATG 60.270 52.381 0.00 0.00 41.20 2.82
4678 7814 0.031178 AAGCCAGTCTTTTGCTTGCG 59.969 50.000 0.00 0.00 43.30 4.85
4917 8217 2.623416 ACGGACATGCTAATCGATGAGA 59.377 45.455 14.43 0.00 0.00 3.27
4937 8237 7.967303 GTGATTGAGATCTGAATTGGAGAAAAC 59.033 37.037 8.90 0.00 33.28 2.43
5104 8407 7.460214 TGGAGAAAAATATGGGTATAGGTGT 57.540 36.000 0.00 0.00 0.00 4.16
5226 8529 7.493743 TGCAAAACACAAATGCATAGAAATT 57.506 28.000 0.00 0.00 44.52 1.82
5622 8929 4.212004 GCTCAAAGATTTCACCCTTTTTGC 59.788 41.667 0.00 0.00 30.89 3.68
5963 9270 3.869065 TCCAGTTTCCATTGACGGATAC 58.131 45.455 0.00 0.00 37.30 2.24
6295 9623 6.039270 CAGATCCAGGTGTGTTTGTTTCTTTA 59.961 38.462 0.00 0.00 0.00 1.85
6759 10297 5.430089 AGAGTCTGGCCTGTAGGAAAATATT 59.570 40.000 3.32 0.00 37.39 1.28
6891 10429 4.698304 TGGAGCGTCTTTTAATAAACTGGG 59.302 41.667 0.00 0.00 0.00 4.45
6989 10532 9.883142 AATTCACCACAATCACTAAAAGAAAAA 57.117 25.926 0.00 0.00 0.00 1.94
7263 10864 4.440214 CGAACCGCATTGCTGAAC 57.560 55.556 7.09 0.15 0.00 3.18
7678 11308 7.668052 ACAAGTACAGCCAGAAAATAATAACCA 59.332 33.333 0.00 0.00 0.00 3.67
7686 11316 7.005709 ACTACTACAAGTACAGCCAGAAAAT 57.994 36.000 0.00 0.00 0.00 1.82
7693 11323 8.815189 GCTAATTAAACTACTACAAGTACAGCC 58.185 37.037 0.00 0.00 0.00 4.85
7694 11324 8.815189 GGCTAATTAAACTACTACAAGTACAGC 58.185 37.037 0.00 0.00 0.00 4.40
7810 11442 0.955905 TCAGCCGGCTTAAAACAACC 59.044 50.000 30.60 0.00 0.00 3.77
7857 11489 2.972505 AGCAGCGGTCCAACGTTG 60.973 61.111 21.47 21.47 45.91 4.10
7960 11597 9.498176 TTCTTATATTATTTTTACGGAGGGAGC 57.502 33.333 0.00 0.00 0.00 4.70
7980 11617 9.751542 CTAGAGTAATGATCCAAACGTTCTTAT 57.248 33.333 0.00 0.00 0.00 1.73
7981 11618 8.746530 ACTAGAGTAATGATCCAAACGTTCTTA 58.253 33.333 0.00 0.00 0.00 2.10
7982 11619 7.612677 ACTAGAGTAATGATCCAAACGTTCTT 58.387 34.615 0.00 0.00 0.00 2.52
7984 11621 7.829378 AACTAGAGTAATGATCCAAACGTTC 57.171 36.000 0.00 0.00 0.00 3.95
7985 11622 9.530633 GATAACTAGAGTAATGATCCAAACGTT 57.469 33.333 0.00 0.00 0.00 3.99
7986 11623 8.915036 AGATAACTAGAGTAATGATCCAAACGT 58.085 33.333 0.00 0.00 0.00 3.99
8015 11652 7.201679 GCCGCATCAAGAAATATATAAGAGCAT 60.202 37.037 0.00 0.00 0.00 3.79
8016 11653 6.092670 GCCGCATCAAGAAATATATAAGAGCA 59.907 38.462 0.00 0.00 0.00 4.26
8017 11654 6.314896 AGCCGCATCAAGAAATATATAAGAGC 59.685 38.462 0.00 0.00 0.00 4.09
8019 11656 6.092670 GCAGCCGCATCAAGAAATATATAAGA 59.907 38.462 0.00 0.00 38.36 2.10
8020 11657 6.128200 TGCAGCCGCATCAAGAAATATATAAG 60.128 38.462 0.00 0.00 45.36 1.73
8021 11658 5.704978 TGCAGCCGCATCAAGAAATATATAA 59.295 36.000 0.00 0.00 45.36 0.98
8022 11659 5.244755 TGCAGCCGCATCAAGAAATATATA 58.755 37.500 0.00 0.00 45.36 0.86
8023 11660 4.074259 TGCAGCCGCATCAAGAAATATAT 58.926 39.130 0.00 0.00 45.36 0.86
8024 11661 3.475575 TGCAGCCGCATCAAGAAATATA 58.524 40.909 0.00 0.00 45.36 0.86
8025 11662 2.300433 TGCAGCCGCATCAAGAAATAT 58.700 42.857 0.00 0.00 45.36 1.28
8026 11663 1.748950 TGCAGCCGCATCAAGAAATA 58.251 45.000 0.00 0.00 45.36 1.40
8027 11664 2.570365 TGCAGCCGCATCAAGAAAT 58.430 47.368 0.00 0.00 45.36 2.17
8050 11687 3.839642 GATCGGAGAGAGCAGCGGC 62.840 68.421 0.00 0.00 43.63 6.53
8053 11690 1.300080 GCAGATCGGAGAGAGCAGC 60.300 63.158 0.00 0.00 43.63 5.25
8054 11691 1.363443 GGCAGATCGGAGAGAGCAG 59.637 63.158 0.00 0.00 43.63 4.24
8056 11693 1.805428 GAGGGCAGATCGGAGAGAGC 61.805 65.000 0.00 0.00 43.63 4.09
8059 11696 1.456518 TGGAGGGCAGATCGGAGAG 60.457 63.158 0.00 0.00 43.63 3.20
8060 11697 1.758514 GTGGAGGGCAGATCGGAGA 60.759 63.158 0.00 0.00 45.75 3.71
8061 11698 1.743321 GAGTGGAGGGCAGATCGGAG 61.743 65.000 0.00 0.00 0.00 4.63
8063 11700 2.801631 GGAGTGGAGGGCAGATCGG 61.802 68.421 0.00 0.00 0.00 4.18
8064 11701 2.801631 GGGAGTGGAGGGCAGATCG 61.802 68.421 0.00 0.00 0.00 3.69
8065 11702 1.690633 TGGGAGTGGAGGGCAGATC 60.691 63.158 0.00 0.00 0.00 2.75
8067 11704 2.607750 GTGGGAGTGGAGGGCAGA 60.608 66.667 0.00 0.00 0.00 4.26
8068 11705 4.087892 CGTGGGAGTGGAGGGCAG 62.088 72.222 0.00 0.00 0.00 4.85
8069 11706 3.533079 TACGTGGGAGTGGAGGGCA 62.533 63.158 0.00 0.00 0.00 5.36
8070 11707 2.682494 TACGTGGGAGTGGAGGGC 60.682 66.667 0.00 0.00 0.00 5.19
8072 11709 1.321074 GGAGTACGTGGGAGTGGAGG 61.321 65.000 0.00 0.00 0.00 4.30
8073 11710 1.321074 GGGAGTACGTGGGAGTGGAG 61.321 65.000 0.00 0.00 0.00 3.86
8075 11712 1.305046 AGGGAGTACGTGGGAGTGG 60.305 63.158 0.00 0.00 0.00 4.00
8076 11713 1.321074 GGAGGGAGTACGTGGGAGTG 61.321 65.000 0.00 0.00 0.00 3.51
8077 11714 1.000107 GGAGGGAGTACGTGGGAGT 60.000 63.158 0.00 0.00 0.00 3.85
8078 11715 2.119655 CGGAGGGAGTACGTGGGAG 61.120 68.421 0.00 0.00 0.00 4.30
8080 11717 0.680921 TTACGGAGGGAGTACGTGGG 60.681 60.000 0.00 0.00 41.40 4.61
8081 11718 1.176527 TTTACGGAGGGAGTACGTGG 58.823 55.000 0.00 0.00 41.40 4.94
8082 11719 3.302365 TTTTTACGGAGGGAGTACGTG 57.698 47.619 0.00 0.00 41.40 4.49
8083 11720 5.659440 TTATTTTTACGGAGGGAGTACGT 57.341 39.130 0.00 0.00 43.88 3.57
8088 11725 9.152595 GCTCTTATATTATTTTTACGGAGGGAG 57.847 37.037 0.00 0.00 0.00 4.30
8089 11726 7.816031 CGCTCTTATATTATTTTTACGGAGGGA 59.184 37.037 0.00 0.00 33.81 4.20
8090 11727 7.601508 ACGCTCTTATATTATTTTTACGGAGGG 59.398 37.037 0.00 0.00 36.55 4.30
8091 11728 8.530269 ACGCTCTTATATTATTTTTACGGAGG 57.470 34.615 0.00 0.00 0.00 4.30
8094 11731 9.377383 CCAAACGCTCTTATATTATTTTTACGG 57.623 33.333 0.00 0.00 0.00 4.02
8226 15062 5.488341 TCCCAAAAGTATGCAGTCTAACTC 58.512 41.667 0.00 0.00 0.00 3.01
8375 15211 6.935167 TCTTCTTTTTCAGCCTTGTCTTTTT 58.065 32.000 0.00 0.00 0.00 1.94
8376 15212 6.378280 TCTCTTCTTTTTCAGCCTTGTCTTTT 59.622 34.615 0.00 0.00 0.00 2.27
8377 15213 5.888161 TCTCTTCTTTTTCAGCCTTGTCTTT 59.112 36.000 0.00 0.00 0.00 2.52
8535 15378 5.349061 TTCTTTAATACTCCCTCCGTTCC 57.651 43.478 0.00 0.00 0.00 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.