Multiple sequence alignment - TraesCS2D01G089300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G089300 chr2D 100.000 2977 0 0 1 2977 39409276 39412252 0.000000e+00 5498.0
1 TraesCS2D01G089300 chr2D 92.446 1390 62 19 838 2200 55713552 55712179 0.000000e+00 1945.0
2 TraesCS2D01G089300 chr2D 92.116 761 59 1 2204 2964 640839165 640839924 0.000000e+00 1072.0
3 TraesCS2D01G089300 chr2B 94.530 1371 53 11 838 2200 88418916 88417560 0.000000e+00 2097.0
4 TraesCS2D01G089300 chr2B 91.950 795 47 13 1414 2200 88251457 88250672 0.000000e+00 1098.0
5 TraesCS2D01G089300 chr2B 82.955 88 13 2 57 143 1783882 1783968 8.850000e-11 78.7
6 TraesCS2D01G089300 chr2A 95.012 1283 53 6 845 2123 57150466 57149191 0.000000e+00 2004.0
7 TraesCS2D01G089300 chr2A 90.921 771 70 0 2205 2975 95256049 95256819 0.000000e+00 1037.0
8 TraesCS2D01G089300 chr2A 78.981 157 29 4 535 690 57151628 57151475 1.460000e-18 104.0
9 TraesCS2D01G089300 chr2A 82.955 88 13 2 57 143 78439823 78439909 8.850000e-11 78.7
10 TraesCS2D01G089300 chr2A 85.938 64 9 0 57 120 773343821 773343758 5.320000e-08 69.4
11 TraesCS2D01G089300 chr5D 95.812 764 32 0 2214 2977 532831701 532832464 0.000000e+00 1234.0
12 TraesCS2D01G089300 chr5D 82.222 90 11 4 57 143 240944170 240944083 4.120000e-09 73.1
13 TraesCS2D01G089300 chr5B 94.186 774 43 2 2205 2977 665605017 665604245 0.000000e+00 1179.0
14 TraesCS2D01G089300 chr3B 91.602 774 65 0 2202 2975 171819381 171818608 0.000000e+00 1070.0
15 TraesCS2D01G089300 chr1B 91.321 772 67 0 2204 2975 26039362 26040133 0.000000e+00 1055.0
16 TraesCS2D01G089300 chr1B 90.219 777 72 4 2200 2975 18861942 18862715 0.000000e+00 1011.0
17 TraesCS2D01G089300 chr1B 89.919 744 75 0 2232 2975 122978665 122979408 0.000000e+00 959.0
18 TraesCS2D01G089300 chr1B 79.141 163 28 6 534 690 193015456 193015618 1.130000e-19 108.0
19 TraesCS2D01G089300 chr1B 83.761 117 16 3 133 247 679298014 679297899 1.130000e-19 108.0
20 TraesCS2D01G089300 chr1B 80.734 109 21 0 719 827 317821816 317821924 5.290000e-13 86.1
21 TraesCS2D01G089300 chr1B 88.889 63 5 1 57 117 684330036 684330098 3.180000e-10 76.8
22 TraesCS2D01G089300 chr1B 88.889 63 5 1 57 117 684544397 684544335 3.180000e-10 76.8
23 TraesCS2D01G089300 chr1B 86.154 65 7 2 57 120 664301569 664301506 5.320000e-08 69.4
24 TraesCS2D01G089300 chr1B 84.375 64 10 0 57 120 509117318 509117255 2.480000e-06 63.9
25 TraesCS2D01G089300 chr5A 89.909 773 73 5 2206 2977 367709870 367709102 0.000000e+00 990.0
26 TraesCS2D01G089300 chr5A 90.625 64 6 0 57 120 510888784 510888721 5.290000e-13 86.1
27 TraesCS2D01G089300 chr5A 97.222 36 1 0 25 60 306192313 306192348 8.910000e-06 62.1
28 TraesCS2D01G089300 chr4D 92.308 182 12 1 147 328 473824518 473824339 1.060000e-64 257.0
29 TraesCS2D01G089300 chr7B 88.710 186 18 1 146 328 707822432 707822247 1.070000e-54 224.0
30 TraesCS2D01G089300 chr7B 73.438 320 54 16 535 823 452971515 452971834 1.140000e-14 91.6
31 TraesCS2D01G089300 chr4A 94.697 132 7 0 407 538 490357419 490357550 3.890000e-49 206.0
32 TraesCS2D01G089300 chr7A 84.375 160 25 0 1042 1201 251615433 251615274 1.100000e-34 158.0
33 TraesCS2D01G089300 chr7A 86.364 132 18 0 1042 1173 299527339 299527470 8.600000e-31 145.0
34 TraesCS2D01G089300 chrUn 87.603 121 15 0 1053 1173 13816686 13816566 1.110000e-29 141.0
35 TraesCS2D01G089300 chr6A 80.000 110 20 2 719 827 66387208 66387316 2.460000e-11 80.5
36 TraesCS2D01G089300 chr6B 89.655 58 5 1 1 58 22266094 22266150 4.120000e-09 73.1
37 TraesCS2D01G089300 chr4B 75.610 164 31 6 535 690 536130783 536130945 4.120000e-09 73.1
38 TraesCS2D01G089300 chr4B 75.610 164 31 6 535 690 536136583 536136745 4.120000e-09 73.1
39 TraesCS2D01G089300 chr7D 87.931 58 4 3 6 61 596899191 596899135 6.890000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G089300 chr2D 39409276 39412252 2976 False 5498 5498 100.0000 1 2977 1 chr2D.!!$F1 2976
1 TraesCS2D01G089300 chr2D 55712179 55713552 1373 True 1945 1945 92.4460 838 2200 1 chr2D.!!$R1 1362
2 TraesCS2D01G089300 chr2D 640839165 640839924 759 False 1072 1072 92.1160 2204 2964 1 chr2D.!!$F2 760
3 TraesCS2D01G089300 chr2B 88417560 88418916 1356 True 2097 2097 94.5300 838 2200 1 chr2B.!!$R2 1362
4 TraesCS2D01G089300 chr2B 88250672 88251457 785 True 1098 1098 91.9500 1414 2200 1 chr2B.!!$R1 786
5 TraesCS2D01G089300 chr2A 57149191 57151628 2437 True 1054 2004 86.9965 535 2123 2 chr2A.!!$R2 1588
6 TraesCS2D01G089300 chr2A 95256049 95256819 770 False 1037 1037 90.9210 2205 2975 1 chr2A.!!$F2 770
7 TraesCS2D01G089300 chr5D 532831701 532832464 763 False 1234 1234 95.8120 2214 2977 1 chr5D.!!$F1 763
8 TraesCS2D01G089300 chr5B 665604245 665605017 772 True 1179 1179 94.1860 2205 2977 1 chr5B.!!$R1 772
9 TraesCS2D01G089300 chr3B 171818608 171819381 773 True 1070 1070 91.6020 2202 2975 1 chr3B.!!$R1 773
10 TraesCS2D01G089300 chr1B 26039362 26040133 771 False 1055 1055 91.3210 2204 2975 1 chr1B.!!$F2 771
11 TraesCS2D01G089300 chr1B 18861942 18862715 773 False 1011 1011 90.2190 2200 2975 1 chr1B.!!$F1 775
12 TraesCS2D01G089300 chr1B 122978665 122979408 743 False 959 959 89.9190 2232 2975 1 chr1B.!!$F3 743
13 TraesCS2D01G089300 chr5A 367709102 367709870 768 True 990 990 89.9090 2206 2977 1 chr5A.!!$R1 771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
367 368 0.026803 GCTCTTCGCCTAACGCAATG 59.973 55.0 0.0 0.0 43.23 2.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2255 3139 0.389948 GTAGCCTGTTGACGGACTGG 60.39 60.0 7.19 7.19 40.46 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.124487 CCCCAGGCGGCGATTTTA 60.124 61.111 12.98 0.00 0.00 1.52
23 24 2.478033 CCCCAGGCGGCGATTTTAC 61.478 63.158 12.98 0.00 0.00 2.01
24 25 1.747367 CCCAGGCGGCGATTTTACA 60.747 57.895 12.98 0.00 0.00 2.41
25 26 1.101049 CCCAGGCGGCGATTTTACAT 61.101 55.000 12.98 0.00 0.00 2.29
26 27 0.029300 CCAGGCGGCGATTTTACATG 59.971 55.000 12.98 0.00 0.00 3.21
27 28 0.592247 CAGGCGGCGATTTTACATGC 60.592 55.000 12.98 0.00 0.00 4.06
28 29 1.299089 GGCGGCGATTTTACATGCC 60.299 57.895 12.98 0.00 44.09 4.40
29 30 1.299089 GCGGCGATTTTACATGCCC 60.299 57.895 12.98 0.00 44.71 5.36
30 31 1.358759 CGGCGATTTTACATGCCCC 59.641 57.895 0.00 0.00 44.71 5.80
31 32 1.739667 GGCGATTTTACATGCCCCC 59.260 57.895 0.00 0.00 41.70 5.40
32 33 0.755327 GGCGATTTTACATGCCCCCT 60.755 55.000 0.00 0.00 41.70 4.79
33 34 0.385390 GCGATTTTACATGCCCCCTG 59.615 55.000 0.00 0.00 0.00 4.45
34 35 1.032014 CGATTTTACATGCCCCCTGG 58.968 55.000 0.00 0.00 0.00 4.45
57 58 2.559785 CAACGGCTGGAAATGCTCT 58.440 52.632 0.00 0.00 0.00 4.09
58 59 1.737838 CAACGGCTGGAAATGCTCTA 58.262 50.000 0.00 0.00 0.00 2.43
59 60 2.083774 CAACGGCTGGAAATGCTCTAA 58.916 47.619 0.00 0.00 0.00 2.10
60 61 2.684881 CAACGGCTGGAAATGCTCTAAT 59.315 45.455 0.00 0.00 0.00 1.73
61 62 2.292267 ACGGCTGGAAATGCTCTAATG 58.708 47.619 0.00 0.00 0.00 1.90
62 63 2.092968 ACGGCTGGAAATGCTCTAATGA 60.093 45.455 0.00 0.00 0.00 2.57
63 64 3.144506 CGGCTGGAAATGCTCTAATGAT 58.855 45.455 0.00 0.00 0.00 2.45
64 65 3.058432 CGGCTGGAAATGCTCTAATGATG 60.058 47.826 0.00 0.00 0.00 3.07
65 66 3.305199 GGCTGGAAATGCTCTAATGATGC 60.305 47.826 0.00 0.00 0.00 3.91
66 67 3.317149 GCTGGAAATGCTCTAATGATGCA 59.683 43.478 0.00 0.00 41.13 3.96
67 68 4.202080 GCTGGAAATGCTCTAATGATGCAA 60.202 41.667 0.00 0.00 40.24 4.08
68 69 5.509163 GCTGGAAATGCTCTAATGATGCAAT 60.509 40.000 0.00 0.00 40.24 3.56
69 70 6.474140 TGGAAATGCTCTAATGATGCAATT 57.526 33.333 0.00 0.00 40.24 2.32
70 71 7.585579 TGGAAATGCTCTAATGATGCAATTA 57.414 32.000 0.00 0.00 40.24 1.40
71 72 7.654568 TGGAAATGCTCTAATGATGCAATTAG 58.345 34.615 10.66 10.66 40.19 1.73
72 73 6.585322 GGAAATGCTCTAATGATGCAATTAGC 59.415 38.462 11.72 6.22 39.16 3.09
73 74 6.896021 AATGCTCTAATGATGCAATTAGCT 57.104 33.333 11.72 0.00 45.94 3.32
74 75 5.684550 TGCTCTAATGATGCAATTAGCTG 57.315 39.130 11.72 8.85 45.94 4.24
75 76 4.023450 TGCTCTAATGATGCAATTAGCTGC 60.023 41.667 18.53 18.53 45.94 5.25
76 77 4.709640 CTCTAATGATGCAATTAGCTGCG 58.290 43.478 11.72 0.36 45.74 5.18
77 78 2.787601 AATGATGCAATTAGCTGCGG 57.212 45.000 0.00 0.00 45.74 5.69
78 79 0.313043 ATGATGCAATTAGCTGCGGC 59.687 50.000 10.33 10.33 45.74 6.53
79 80 1.008079 GATGCAATTAGCTGCGGCC 60.008 57.895 15.55 0.00 45.74 6.13
80 81 1.727511 GATGCAATTAGCTGCGGCCA 61.728 55.000 15.55 3.84 45.74 5.36
81 82 1.111116 ATGCAATTAGCTGCGGCCAT 61.111 50.000 15.55 6.37 45.74 4.40
82 83 1.321805 TGCAATTAGCTGCGGCCATT 61.322 50.000 15.55 10.39 45.74 3.16
83 84 0.667993 GCAATTAGCTGCGGCCATTA 59.332 50.000 15.55 0.00 41.15 1.90
84 85 1.335324 GCAATTAGCTGCGGCCATTAG 60.335 52.381 15.55 8.98 41.15 1.73
85 86 0.954452 AATTAGCTGCGGCCATTAGC 59.046 50.000 15.55 13.40 39.73 3.09
108 109 2.836262 ACGTATAGTAGACAGCTCGCT 58.164 47.619 0.00 0.00 0.00 4.93
109 110 3.987547 ACGTATAGTAGACAGCTCGCTA 58.012 45.455 0.00 0.00 0.00 4.26
110 111 4.375272 ACGTATAGTAGACAGCTCGCTAA 58.625 43.478 0.00 0.00 0.00 3.09
111 112 4.813161 ACGTATAGTAGACAGCTCGCTAAA 59.187 41.667 0.00 0.00 0.00 1.85
112 113 5.295292 ACGTATAGTAGACAGCTCGCTAAAA 59.705 40.000 0.00 0.00 0.00 1.52
113 114 6.183360 ACGTATAGTAGACAGCTCGCTAAAAA 60.183 38.462 0.00 0.00 0.00 1.94
114 115 6.856938 CGTATAGTAGACAGCTCGCTAAAAAT 59.143 38.462 0.00 0.00 0.00 1.82
115 116 7.149112 CGTATAGTAGACAGCTCGCTAAAAATG 60.149 40.741 0.00 0.00 0.00 2.32
116 117 4.822026 AGTAGACAGCTCGCTAAAAATGT 58.178 39.130 0.00 0.00 0.00 2.71
117 118 5.238583 AGTAGACAGCTCGCTAAAAATGTT 58.761 37.500 0.00 0.00 0.00 2.71
118 119 4.670227 AGACAGCTCGCTAAAAATGTTC 57.330 40.909 0.00 0.00 0.00 3.18
119 120 4.065088 AGACAGCTCGCTAAAAATGTTCA 58.935 39.130 0.00 0.00 0.00 3.18
120 121 4.515191 AGACAGCTCGCTAAAAATGTTCAA 59.485 37.500 0.00 0.00 0.00 2.69
121 122 5.182001 AGACAGCTCGCTAAAAATGTTCAAT 59.818 36.000 0.00 0.00 0.00 2.57
122 123 5.156355 ACAGCTCGCTAAAAATGTTCAATG 58.844 37.500 0.00 0.00 0.00 2.82
123 124 4.560035 CAGCTCGCTAAAAATGTTCAATGG 59.440 41.667 0.00 0.00 0.00 3.16
124 125 3.859386 GCTCGCTAAAAATGTTCAATGGG 59.141 43.478 0.00 0.00 0.00 4.00
125 126 3.843999 TCGCTAAAAATGTTCAATGGGC 58.156 40.909 0.00 0.00 0.00 5.36
126 127 2.598192 CGCTAAAAATGTTCAATGGGCG 59.402 45.455 0.00 0.00 0.00 6.13
127 128 3.671971 CGCTAAAAATGTTCAATGGGCGA 60.672 43.478 0.00 0.00 41.07 5.54
128 129 3.859386 GCTAAAAATGTTCAATGGGCGAG 59.141 43.478 0.00 0.00 0.00 5.03
129 130 2.368655 AAAATGTTCAATGGGCGAGC 57.631 45.000 0.00 0.00 0.00 5.03
130 131 1.549203 AAATGTTCAATGGGCGAGCT 58.451 45.000 0.00 0.00 0.00 4.09
131 132 2.418368 AATGTTCAATGGGCGAGCTA 57.582 45.000 0.00 0.00 0.00 3.32
132 133 2.645838 ATGTTCAATGGGCGAGCTAT 57.354 45.000 0.00 0.00 0.00 2.97
133 134 2.418368 TGTTCAATGGGCGAGCTATT 57.582 45.000 0.00 0.00 0.00 1.73
134 135 2.016318 TGTTCAATGGGCGAGCTATTG 58.984 47.619 14.60 14.60 34.07 1.90
135 136 1.334869 GTTCAATGGGCGAGCTATTGG 59.665 52.381 18.01 6.98 33.70 3.16
136 137 0.819259 TCAATGGGCGAGCTATTGGC 60.819 55.000 18.01 2.74 42.19 4.52
137 138 1.102809 CAATGGGCGAGCTATTGGCA 61.103 55.000 13.60 0.00 44.79 4.92
138 139 0.820891 AATGGGCGAGCTATTGGCAG 60.821 55.000 8.57 0.00 44.79 4.85
139 140 2.592861 GGGCGAGCTATTGGCAGG 60.593 66.667 8.57 0.00 44.79 4.85
140 141 2.592861 GGCGAGCTATTGGCAGGG 60.593 66.667 0.00 0.00 44.79 4.45
141 142 2.592861 GCGAGCTATTGGCAGGGG 60.593 66.667 0.00 0.00 44.79 4.79
142 143 2.911143 CGAGCTATTGGCAGGGGT 59.089 61.111 0.00 0.00 44.79 4.95
143 144 1.224592 CGAGCTATTGGCAGGGGTT 59.775 57.895 0.00 0.00 44.79 4.11
144 145 1.097547 CGAGCTATTGGCAGGGGTTG 61.098 60.000 0.00 0.00 44.79 3.77
145 146 0.255890 GAGCTATTGGCAGGGGTTGA 59.744 55.000 0.00 0.00 44.79 3.18
146 147 0.034089 AGCTATTGGCAGGGGTTGAC 60.034 55.000 0.00 0.00 44.79 3.18
147 148 1.037579 GCTATTGGCAGGGGTTGACC 61.038 60.000 0.00 0.00 41.35 4.02
148 149 0.748005 CTATTGGCAGGGGTTGACCG 60.748 60.000 0.00 0.00 41.60 4.79
149 150 1.202099 TATTGGCAGGGGTTGACCGA 61.202 55.000 0.00 0.00 41.60 4.69
150 151 2.484287 ATTGGCAGGGGTTGACCGAG 62.484 60.000 0.00 0.00 41.60 4.63
152 153 4.329545 GCAGGGGTTGACCGAGCA 62.330 66.667 5.58 0.00 41.60 4.26
153 154 2.429930 CAGGGGTTGACCGAGCAA 59.570 61.111 0.00 0.00 41.60 3.91
154 155 1.002134 CAGGGGTTGACCGAGCAAT 60.002 57.895 0.00 0.00 41.60 3.56
155 156 1.002134 AGGGGTTGACCGAGCAATG 60.002 57.895 0.00 0.00 41.60 2.82
156 157 2.700773 GGGGTTGACCGAGCAATGC 61.701 63.158 0.00 0.00 41.60 3.56
157 158 1.675641 GGGTTGACCGAGCAATGCT 60.676 57.895 7.79 7.79 43.88 3.79
158 159 0.392461 GGGTTGACCGAGCAATGCTA 60.392 55.000 8.12 0.00 39.88 3.49
159 160 0.727398 GGTTGACCGAGCAATGCTAC 59.273 55.000 8.12 0.71 39.88 3.58
160 161 1.438651 GTTGACCGAGCAATGCTACA 58.561 50.000 8.12 3.78 39.88 2.74
161 162 1.128692 GTTGACCGAGCAATGCTACAC 59.871 52.381 8.12 0.95 39.88 2.90
162 163 0.391130 TGACCGAGCAATGCTACACC 60.391 55.000 8.12 0.00 39.88 4.16
163 164 0.108138 GACCGAGCAATGCTACACCT 60.108 55.000 8.12 0.00 39.88 4.00
164 165 1.136305 GACCGAGCAATGCTACACCTA 59.864 52.381 8.12 0.00 39.88 3.08
165 166 1.762957 ACCGAGCAATGCTACACCTAT 59.237 47.619 8.12 0.00 39.88 2.57
166 167 2.138320 CCGAGCAATGCTACACCTATG 58.862 52.381 8.12 0.00 39.88 2.23
167 168 2.483714 CCGAGCAATGCTACACCTATGT 60.484 50.000 8.12 0.00 39.88 2.29
168 169 3.243737 CCGAGCAATGCTACACCTATGTA 60.244 47.826 8.12 0.00 39.88 2.29
181 182 5.743117 ACACCTATGTAGAGACTCTTACGT 58.257 41.667 10.96 10.33 37.26 3.57
182 183 6.882656 ACACCTATGTAGAGACTCTTACGTA 58.117 40.000 10.96 10.85 37.26 3.57
183 184 6.760770 ACACCTATGTAGAGACTCTTACGTAC 59.239 42.308 10.96 2.76 37.26 3.67
184 185 6.202570 CACCTATGTAGAGACTCTTACGTACC 59.797 46.154 10.96 0.00 0.00 3.34
185 186 6.126940 ACCTATGTAGAGACTCTTACGTACCA 60.127 42.308 10.96 0.00 0.00 3.25
186 187 6.935771 CCTATGTAGAGACTCTTACGTACCAT 59.064 42.308 10.96 4.98 0.00 3.55
187 188 8.093307 CCTATGTAGAGACTCTTACGTACCATA 58.907 40.741 10.96 5.75 0.00 2.74
188 189 9.656040 CTATGTAGAGACTCTTACGTACCATAT 57.344 37.037 10.96 0.00 0.00 1.78
189 190 7.725818 TGTAGAGACTCTTACGTACCATATG 57.274 40.000 10.96 0.00 0.00 1.78
190 191 7.278135 TGTAGAGACTCTTACGTACCATATGT 58.722 38.462 10.96 0.00 0.00 2.29
191 192 8.424133 TGTAGAGACTCTTACGTACCATATGTA 58.576 37.037 10.96 0.00 0.00 2.29
192 193 9.265901 GTAGAGACTCTTACGTACCATATGTAA 57.734 37.037 10.96 1.75 37.71 2.41
193 194 8.921353 AGAGACTCTTACGTACCATATGTAAT 57.079 34.615 0.00 0.00 38.90 1.89
194 195 9.352191 AGAGACTCTTACGTACCATATGTAATT 57.648 33.333 0.00 0.00 38.90 1.40
195 196 9.395707 GAGACTCTTACGTACCATATGTAATTG 57.604 37.037 1.24 1.95 38.90 2.32
196 197 7.866393 AGACTCTTACGTACCATATGTAATTGC 59.134 37.037 1.24 0.00 38.90 3.56
197 198 7.723324 ACTCTTACGTACCATATGTAATTGCT 58.277 34.615 1.24 0.00 38.90 3.91
198 199 7.652105 ACTCTTACGTACCATATGTAATTGCTG 59.348 37.037 1.24 0.00 38.90 4.41
199 200 7.718525 TCTTACGTACCATATGTAATTGCTGA 58.281 34.615 1.24 0.00 38.90 4.26
200 201 8.364894 TCTTACGTACCATATGTAATTGCTGAT 58.635 33.333 1.24 0.00 38.90 2.90
201 202 8.896320 TTACGTACCATATGTAATTGCTGATT 57.104 30.769 1.24 0.00 35.76 2.57
202 203 7.801716 ACGTACCATATGTAATTGCTGATTT 57.198 32.000 1.24 0.00 0.00 2.17
203 204 7.639039 ACGTACCATATGTAATTGCTGATTTG 58.361 34.615 1.24 0.00 0.00 2.32
204 205 7.077605 CGTACCATATGTAATTGCTGATTTGG 58.922 38.462 1.24 0.00 30.34 3.28
205 206 5.846203 ACCATATGTAATTGCTGATTTGGC 58.154 37.500 1.24 0.00 27.98 4.52
206 207 5.363292 ACCATATGTAATTGCTGATTTGGCA 59.637 36.000 1.24 0.00 37.97 4.92
207 208 5.924254 CCATATGTAATTGCTGATTTGGCAG 59.076 40.000 1.24 0.00 40.90 4.85
208 209 6.461927 CCATATGTAATTGCTGATTTGGCAGT 60.462 38.462 1.24 0.00 40.90 4.40
209 210 4.870123 TGTAATTGCTGATTTGGCAGTT 57.130 36.364 0.00 0.00 41.27 3.16
210 211 5.212532 TGTAATTGCTGATTTGGCAGTTT 57.787 34.783 2.22 0.00 39.59 2.66
211 212 5.609423 TGTAATTGCTGATTTGGCAGTTTT 58.391 33.333 2.22 0.00 39.59 2.43
212 213 6.054295 TGTAATTGCTGATTTGGCAGTTTTT 58.946 32.000 2.22 0.00 39.59 1.94
213 214 7.212976 TGTAATTGCTGATTTGGCAGTTTTTA 58.787 30.769 2.22 0.00 39.59 1.52
214 215 7.712639 TGTAATTGCTGATTTGGCAGTTTTTAA 59.287 29.630 2.22 0.00 39.59 1.52
215 216 7.748691 AATTGCTGATTTGGCAGTTTTTAAT 57.251 28.000 0.00 0.00 40.90 1.40
216 217 7.748691 ATTGCTGATTTGGCAGTTTTTAATT 57.251 28.000 0.00 0.00 40.90 1.40
217 218 8.845413 ATTGCTGATTTGGCAGTTTTTAATTA 57.155 26.923 0.00 0.00 40.90 1.40
218 219 7.887996 TGCTGATTTGGCAGTTTTTAATTAG 57.112 32.000 0.00 0.00 38.17 1.73
219 220 7.441017 TGCTGATTTGGCAGTTTTTAATTAGT 58.559 30.769 0.00 0.00 38.17 2.24
220 221 7.598493 TGCTGATTTGGCAGTTTTTAATTAGTC 59.402 33.333 0.00 0.00 38.17 2.59
221 222 7.598493 GCTGATTTGGCAGTTTTTAATTAGTCA 59.402 33.333 0.00 0.00 38.17 3.41
222 223 9.643693 CTGATTTGGCAGTTTTTAATTAGTCAT 57.356 29.630 0.00 0.00 0.00 3.06
223 224 9.995003 TGATTTGGCAGTTTTTAATTAGTCATT 57.005 25.926 0.00 0.00 0.00 2.57
228 229 9.906660 TGGCAGTTTTTAATTAGTCATTAGTTG 57.093 29.630 0.00 0.00 0.00 3.16
229 230 9.353999 GGCAGTTTTTAATTAGTCATTAGTTGG 57.646 33.333 0.00 0.00 0.00 3.77
230 231 9.353999 GCAGTTTTTAATTAGTCATTAGTTGGG 57.646 33.333 0.00 0.00 0.00 4.12
231 232 9.855021 CAGTTTTTAATTAGTCATTAGTTGGGG 57.145 33.333 0.00 0.00 0.00 4.96
232 233 9.031537 AGTTTTTAATTAGTCATTAGTTGGGGG 57.968 33.333 0.00 0.00 0.00 5.40
233 234 7.412853 TTTTAATTAGTCATTAGTTGGGGGC 57.587 36.000 0.00 0.00 0.00 5.80
234 235 4.601406 AATTAGTCATTAGTTGGGGGCA 57.399 40.909 0.00 0.00 0.00 5.36
235 236 3.359695 TTAGTCATTAGTTGGGGGCAC 57.640 47.619 0.00 0.00 0.00 5.01
236 237 0.035439 AGTCATTAGTTGGGGGCACG 60.035 55.000 0.00 0.00 0.00 5.34
237 238 1.029947 GTCATTAGTTGGGGGCACGG 61.030 60.000 0.00 0.00 0.00 4.94
238 239 1.752694 CATTAGTTGGGGGCACGGG 60.753 63.158 0.00 0.00 0.00 5.28
239 240 3.655350 ATTAGTTGGGGGCACGGGC 62.655 63.158 0.00 0.00 40.13 6.13
254 255 4.863415 GGCCCACCCTTGAAATCA 57.137 55.556 0.00 0.00 0.00 2.57
255 256 2.583472 GGCCCACCCTTGAAATCAG 58.417 57.895 0.00 0.00 0.00 2.90
256 257 0.972471 GGCCCACCCTTGAAATCAGG 60.972 60.000 0.00 0.00 0.00 3.86
276 277 0.817654 GGGGGCAGTTTGATTAGTGC 59.182 55.000 0.00 0.00 42.47 4.40
277 278 1.616994 GGGGGCAGTTTGATTAGTGCT 60.617 52.381 0.00 0.00 42.73 4.40
278 279 2.171003 GGGGCAGTTTGATTAGTGCTT 58.829 47.619 0.00 0.00 42.73 3.91
279 280 2.562738 GGGGCAGTTTGATTAGTGCTTT 59.437 45.455 0.00 0.00 42.73 3.51
280 281 3.761752 GGGGCAGTTTGATTAGTGCTTTA 59.238 43.478 0.00 0.00 42.73 1.85
281 282 4.142381 GGGGCAGTTTGATTAGTGCTTTAG 60.142 45.833 0.00 0.00 42.73 1.85
282 283 4.415735 GGCAGTTTGATTAGTGCTTTAGC 58.584 43.478 0.00 0.00 42.73 3.09
295 296 3.842732 GCTTTAGCAAATTACGTGGGT 57.157 42.857 0.00 0.00 41.59 4.51
296 297 4.168922 GCTTTAGCAAATTACGTGGGTT 57.831 40.909 0.00 0.00 41.59 4.11
297 298 5.299582 GCTTTAGCAAATTACGTGGGTTA 57.700 39.130 0.00 0.00 41.59 2.85
298 299 5.090757 GCTTTAGCAAATTACGTGGGTTAC 58.909 41.667 0.00 0.00 41.59 2.50
299 300 5.625921 TTTAGCAAATTACGTGGGTTACC 57.374 39.130 0.00 0.00 37.24 2.85
300 301 3.428413 AGCAAATTACGTGGGTTACCT 57.572 42.857 0.00 0.00 37.76 3.08
301 302 4.556592 AGCAAATTACGTGGGTTACCTA 57.443 40.909 0.00 0.00 37.76 3.08
302 303 4.909001 AGCAAATTACGTGGGTTACCTAA 58.091 39.130 0.00 0.00 37.76 2.69
303 304 4.939439 AGCAAATTACGTGGGTTACCTAAG 59.061 41.667 0.00 0.00 37.76 2.18
304 305 4.696877 GCAAATTACGTGGGTTACCTAAGT 59.303 41.667 11.14 11.14 37.76 2.24
305 306 5.391203 GCAAATTACGTGGGTTACCTAAGTG 60.391 44.000 15.49 0.98 37.76 3.16
306 307 3.317603 TTACGTGGGTTACCTAAGTGC 57.682 47.619 15.49 0.00 37.76 4.40
307 308 1.345063 ACGTGGGTTACCTAAGTGCT 58.655 50.000 5.49 0.00 37.76 4.40
308 309 1.001633 ACGTGGGTTACCTAAGTGCTG 59.998 52.381 5.49 0.00 37.76 4.41
309 310 1.001633 CGTGGGTTACCTAAGTGCTGT 59.998 52.381 0.00 0.00 37.76 4.40
310 311 2.549349 CGTGGGTTACCTAAGTGCTGTT 60.549 50.000 0.00 0.00 37.76 3.16
311 312 3.072211 GTGGGTTACCTAAGTGCTGTTC 58.928 50.000 0.00 0.00 37.76 3.18
312 313 2.289195 TGGGTTACCTAAGTGCTGTTCG 60.289 50.000 0.00 0.00 37.76 3.95
313 314 2.289257 GGGTTACCTAAGTGCTGTTCGT 60.289 50.000 0.00 0.00 0.00 3.85
314 315 3.056607 GGGTTACCTAAGTGCTGTTCGTA 60.057 47.826 0.00 0.00 0.00 3.43
315 316 4.171754 GGTTACCTAAGTGCTGTTCGTAG 58.828 47.826 0.00 0.00 0.00 3.51
316 317 4.171754 GTTACCTAAGTGCTGTTCGTAGG 58.828 47.826 9.86 9.86 40.83 3.18
317 318 2.245582 ACCTAAGTGCTGTTCGTAGGT 58.754 47.619 10.76 10.76 42.31 3.08
318 319 2.631545 ACCTAAGTGCTGTTCGTAGGTT 59.368 45.455 10.76 1.11 43.72 3.50
319 320 3.070590 ACCTAAGTGCTGTTCGTAGGTTT 59.929 43.478 10.76 0.00 43.72 3.27
320 321 4.281688 ACCTAAGTGCTGTTCGTAGGTTTA 59.718 41.667 10.76 0.00 43.72 2.01
321 322 4.863131 CCTAAGTGCTGTTCGTAGGTTTAG 59.137 45.833 0.00 0.00 34.18 1.85
322 323 2.685100 AGTGCTGTTCGTAGGTTTAGC 58.315 47.619 0.00 0.00 0.00 3.09
323 324 2.036733 AGTGCTGTTCGTAGGTTTAGCA 59.963 45.455 0.00 0.00 38.68 3.49
324 325 3.000727 GTGCTGTTCGTAGGTTTAGCAT 58.999 45.455 0.00 0.00 42.32 3.79
325 326 3.435671 GTGCTGTTCGTAGGTTTAGCATT 59.564 43.478 0.00 0.00 42.32 3.56
326 327 4.069304 TGCTGTTCGTAGGTTTAGCATTT 58.931 39.130 0.00 0.00 36.37 2.32
327 328 4.517453 TGCTGTTCGTAGGTTTAGCATTTT 59.483 37.500 0.00 0.00 36.37 1.82
328 329 5.009210 TGCTGTTCGTAGGTTTAGCATTTTT 59.991 36.000 0.00 0.00 36.37 1.94
329 330 5.342259 GCTGTTCGTAGGTTTAGCATTTTTG 59.658 40.000 0.00 0.00 0.00 2.44
330 331 5.764131 TGTTCGTAGGTTTAGCATTTTTGG 58.236 37.500 0.00 0.00 0.00 3.28
331 332 5.158494 GTTCGTAGGTTTAGCATTTTTGGG 58.842 41.667 0.00 0.00 0.00 4.12
332 333 3.759618 TCGTAGGTTTAGCATTTTTGGGG 59.240 43.478 0.00 0.00 0.00 4.96
333 334 3.119280 CGTAGGTTTAGCATTTTTGGGGG 60.119 47.826 0.00 0.00 0.00 5.40
334 335 2.984672 AGGTTTAGCATTTTTGGGGGT 58.015 42.857 0.00 0.00 0.00 4.95
335 336 3.322862 AGGTTTAGCATTTTTGGGGGTT 58.677 40.909 0.00 0.00 0.00 4.11
336 337 3.072330 AGGTTTAGCATTTTTGGGGGTTG 59.928 43.478 0.00 0.00 0.00 3.77
337 338 3.071747 GGTTTAGCATTTTTGGGGGTTGA 59.928 43.478 0.00 0.00 0.00 3.18
338 339 4.062293 GTTTAGCATTTTTGGGGGTTGAC 58.938 43.478 0.00 0.00 0.00 3.18
339 340 1.055849 AGCATTTTTGGGGGTTGACC 58.944 50.000 0.00 0.00 39.11 4.02
350 351 4.021925 GTTGACCCCTGCTCGGCT 62.022 66.667 0.00 0.00 0.00 5.52
351 352 3.706373 TTGACCCCTGCTCGGCTC 61.706 66.667 0.00 0.00 0.00 4.70
352 353 4.704103 TGACCCCTGCTCGGCTCT 62.704 66.667 0.00 0.00 0.00 4.09
353 354 3.394836 GACCCCTGCTCGGCTCTT 61.395 66.667 0.00 0.00 0.00 2.85
354 355 3.378399 GACCCCTGCTCGGCTCTTC 62.378 68.421 0.00 0.00 0.00 2.87
355 356 4.521062 CCCCTGCTCGGCTCTTCG 62.521 72.222 0.00 0.00 0.00 3.79
365 366 3.870606 GCTCTTCGCCTAACGCAA 58.129 55.556 0.00 0.00 43.23 4.85
366 367 2.384203 GCTCTTCGCCTAACGCAAT 58.616 52.632 0.00 0.00 43.23 3.56
367 368 0.026803 GCTCTTCGCCTAACGCAATG 59.973 55.000 0.00 0.00 43.23 2.82
368 369 0.652592 CTCTTCGCCTAACGCAATGG 59.347 55.000 0.00 0.00 43.23 3.16
369 370 1.062525 CTTCGCCTAACGCAATGGC 59.937 57.895 0.00 0.00 43.23 4.40
370 371 1.643868 CTTCGCCTAACGCAATGGCA 61.644 55.000 9.39 0.00 46.39 4.92
371 372 1.917782 TTCGCCTAACGCAATGGCAC 61.918 55.000 9.39 0.00 46.39 5.01
372 373 2.398554 CGCCTAACGCAATGGCACT 61.399 57.895 9.39 0.00 46.39 4.40
373 374 1.883021 GCCTAACGCAATGGCACTT 59.117 52.632 0.00 0.00 45.46 3.16
374 375 0.456653 GCCTAACGCAATGGCACTTG 60.457 55.000 0.00 0.00 45.46 3.16
375 376 0.456653 CCTAACGCAATGGCACTTGC 60.457 55.000 18.55 18.55 46.35 4.01
382 383 1.434555 CAATGGCACTTGCAACATGG 58.565 50.000 3.15 0.00 44.36 3.66
383 384 0.320946 AATGGCACTTGCAACATGGC 60.321 50.000 20.13 20.13 44.36 4.40
384 385 2.431260 GGCACTTGCAACATGGCG 60.431 61.111 14.51 0.00 44.36 5.69
385 386 2.644418 GCACTTGCAACATGGCGA 59.356 55.556 0.00 0.00 41.59 5.54
387 388 1.855213 GCACTTGCAACATGGCGAGA 61.855 55.000 15.72 0.00 46.28 4.04
388 389 0.592637 CACTTGCAACATGGCGAGAA 59.407 50.000 15.72 0.00 46.28 2.87
389 390 1.200716 CACTTGCAACATGGCGAGAAT 59.799 47.619 15.72 0.00 46.28 2.40
390 391 2.419673 CACTTGCAACATGGCGAGAATA 59.580 45.455 15.72 0.00 46.28 1.75
391 392 2.679837 ACTTGCAACATGGCGAGAATAG 59.320 45.455 15.72 0.00 46.28 1.73
392 393 2.689553 TGCAACATGGCGAGAATAGA 57.310 45.000 0.00 0.00 36.28 1.98
393 394 2.554142 TGCAACATGGCGAGAATAGAG 58.446 47.619 0.00 0.00 36.28 2.43
394 395 1.869767 GCAACATGGCGAGAATAGAGG 59.130 52.381 0.00 0.00 0.00 3.69
395 396 2.483714 GCAACATGGCGAGAATAGAGGA 60.484 50.000 0.00 0.00 0.00 3.71
396 397 3.388308 CAACATGGCGAGAATAGAGGAG 58.612 50.000 0.00 0.00 0.00 3.69
397 398 1.967066 ACATGGCGAGAATAGAGGAGG 59.033 52.381 0.00 0.00 0.00 4.30
398 399 1.967066 CATGGCGAGAATAGAGGAGGT 59.033 52.381 0.00 0.00 0.00 3.85
399 400 1.403814 TGGCGAGAATAGAGGAGGTG 58.596 55.000 0.00 0.00 0.00 4.00
400 401 1.342076 TGGCGAGAATAGAGGAGGTGT 60.342 52.381 0.00 0.00 0.00 4.16
401 402 1.067821 GGCGAGAATAGAGGAGGTGTG 59.932 57.143 0.00 0.00 0.00 3.82
402 403 2.025155 GCGAGAATAGAGGAGGTGTGA 58.975 52.381 0.00 0.00 0.00 3.58
403 404 2.223618 GCGAGAATAGAGGAGGTGTGAC 60.224 54.545 0.00 0.00 0.00 3.67
404 405 2.032302 CGAGAATAGAGGAGGTGTGACG 59.968 54.545 0.00 0.00 0.00 4.35
405 406 3.018149 GAGAATAGAGGAGGTGTGACGT 58.982 50.000 0.00 0.00 0.00 4.34
406 407 2.755655 AGAATAGAGGAGGTGTGACGTG 59.244 50.000 0.00 0.00 0.00 4.49
407 408 0.818296 ATAGAGGAGGTGTGACGTGC 59.182 55.000 0.00 0.00 0.00 5.34
408 409 0.538746 TAGAGGAGGTGTGACGTGCA 60.539 55.000 0.00 0.00 0.00 4.57
409 410 1.373497 GAGGAGGTGTGACGTGCAG 60.373 63.158 0.00 0.00 0.00 4.41
410 411 1.806461 GAGGAGGTGTGACGTGCAGA 61.806 60.000 0.00 0.00 0.00 4.26
411 412 1.188219 AGGAGGTGTGACGTGCAGAT 61.188 55.000 0.00 0.00 0.00 2.90
412 413 1.016130 GGAGGTGTGACGTGCAGATG 61.016 60.000 0.00 0.00 0.00 2.90
413 414 1.630244 GAGGTGTGACGTGCAGATGC 61.630 60.000 0.00 0.00 42.50 3.91
424 425 4.790962 CAGATGCAGGTGCGGGCT 62.791 66.667 0.00 0.00 45.83 5.19
425 426 3.083349 AGATGCAGGTGCGGGCTA 61.083 61.111 0.00 0.00 45.83 3.93
426 427 2.897350 GATGCAGGTGCGGGCTAC 60.897 66.667 0.00 0.00 45.83 3.58
427 428 4.489771 ATGCAGGTGCGGGCTACC 62.490 66.667 0.00 4.71 45.83 3.18
437 438 4.913126 GGGCTACCGTTCACTGAG 57.087 61.111 0.00 0.00 0.00 3.35
438 439 2.273908 GGGCTACCGTTCACTGAGA 58.726 57.895 0.00 0.00 0.00 3.27
439 440 0.606604 GGGCTACCGTTCACTGAGAA 59.393 55.000 0.00 0.00 0.00 2.87
440 441 1.207329 GGGCTACCGTTCACTGAGAAT 59.793 52.381 0.00 0.00 38.76 2.40
441 442 2.541556 GGCTACCGTTCACTGAGAATC 58.458 52.381 0.00 0.00 38.76 2.52
442 443 2.541556 GCTACCGTTCACTGAGAATCC 58.458 52.381 0.00 0.00 38.76 3.01
443 444 2.166664 GCTACCGTTCACTGAGAATCCT 59.833 50.000 0.00 0.00 38.76 3.24
444 445 3.368531 GCTACCGTTCACTGAGAATCCTT 60.369 47.826 0.00 0.00 38.76 3.36
445 446 3.771577 ACCGTTCACTGAGAATCCTTT 57.228 42.857 0.00 0.00 38.76 3.11
446 447 3.403038 ACCGTTCACTGAGAATCCTTTG 58.597 45.455 0.00 0.00 38.76 2.77
447 448 3.071023 ACCGTTCACTGAGAATCCTTTGA 59.929 43.478 0.00 0.00 38.76 2.69
448 449 4.256920 CCGTTCACTGAGAATCCTTTGAT 58.743 43.478 0.00 0.00 38.76 2.57
449 450 4.697352 CCGTTCACTGAGAATCCTTTGATT 59.303 41.667 0.00 0.00 43.91 2.57
462 463 5.932619 TCCTTTGATTCTCAACCGATAGA 57.067 39.130 0.00 0.00 35.89 1.98
463 464 6.485830 TCCTTTGATTCTCAACCGATAGAT 57.514 37.500 0.00 0.00 35.89 1.98
464 465 6.889198 TCCTTTGATTCTCAACCGATAGATT 58.111 36.000 0.00 0.00 35.89 2.40
465 466 7.338710 TCCTTTGATTCTCAACCGATAGATTT 58.661 34.615 0.00 0.00 35.89 2.17
466 467 8.482943 TCCTTTGATTCTCAACCGATAGATTTA 58.517 33.333 0.00 0.00 35.89 1.40
467 468 9.277783 CCTTTGATTCTCAACCGATAGATTTAT 57.722 33.333 0.00 0.00 35.89 1.40
469 470 9.830975 TTTGATTCTCAACCGATAGATTTATGA 57.169 29.630 0.00 0.00 35.89 2.15
470 471 9.481340 TTGATTCTCAACCGATAGATTTATGAG 57.519 33.333 0.00 0.00 31.17 2.90
471 472 8.860088 TGATTCTCAACCGATAGATTTATGAGA 58.140 33.333 0.00 0.00 39.82 3.27
472 473 9.134734 GATTCTCAACCGATAGATTTATGAGAC 57.865 37.037 2.32 0.00 40.88 3.36
473 474 6.669278 TCTCAACCGATAGATTTATGAGACG 58.331 40.000 0.00 0.00 37.49 4.18
474 475 6.485648 TCTCAACCGATAGATTTATGAGACGA 59.514 38.462 0.00 0.00 37.49 4.20
475 476 7.012989 TCTCAACCGATAGATTTATGAGACGAA 59.987 37.037 0.00 0.00 37.49 3.85
476 477 6.916387 TCAACCGATAGATTTATGAGACGAAC 59.084 38.462 0.00 0.00 39.76 3.95
477 478 5.450171 ACCGATAGATTTATGAGACGAACG 58.550 41.667 0.00 0.00 39.76 3.95
478 479 4.852104 CCGATAGATTTATGAGACGAACGG 59.148 45.833 0.00 0.00 39.76 4.44
479 480 4.321217 CGATAGATTTATGAGACGAACGGC 59.679 45.833 0.00 0.00 39.76 5.68
480 481 3.802948 AGATTTATGAGACGAACGGCT 57.197 42.857 1.07 1.07 35.26 5.52
481 482 4.913335 AGATTTATGAGACGAACGGCTA 57.087 40.909 1.60 0.00 30.74 3.93
482 483 4.861210 AGATTTATGAGACGAACGGCTAG 58.139 43.478 1.60 0.00 30.74 3.42
483 484 3.431922 TTTATGAGACGAACGGCTAGG 57.568 47.619 1.60 0.00 30.74 3.02
484 485 2.336945 TATGAGACGAACGGCTAGGA 57.663 50.000 1.60 0.00 30.74 2.94
485 486 1.693627 ATGAGACGAACGGCTAGGAT 58.306 50.000 1.60 0.00 30.74 3.24
486 487 1.471119 TGAGACGAACGGCTAGGATT 58.529 50.000 1.60 0.00 30.74 3.01
487 488 1.134367 TGAGACGAACGGCTAGGATTG 59.866 52.381 1.60 0.00 30.74 2.67
488 489 1.404391 GAGACGAACGGCTAGGATTGA 59.596 52.381 1.60 0.00 30.74 2.57
489 490 2.032620 AGACGAACGGCTAGGATTGAT 58.967 47.619 0.00 0.00 0.00 2.57
490 491 3.220110 AGACGAACGGCTAGGATTGATA 58.780 45.455 0.00 0.00 0.00 2.15
491 492 3.827302 AGACGAACGGCTAGGATTGATAT 59.173 43.478 0.00 0.00 0.00 1.63
492 493 4.281182 AGACGAACGGCTAGGATTGATATT 59.719 41.667 0.00 0.00 0.00 1.28
493 494 4.307432 ACGAACGGCTAGGATTGATATTG 58.693 43.478 0.00 0.00 0.00 1.90
494 495 4.202223 ACGAACGGCTAGGATTGATATTGT 60.202 41.667 0.00 0.00 0.00 2.71
495 496 4.750098 CGAACGGCTAGGATTGATATTGTT 59.250 41.667 0.00 0.00 0.00 2.83
496 497 5.333339 CGAACGGCTAGGATTGATATTGTTG 60.333 44.000 0.00 0.00 0.00 3.33
497 498 3.815401 ACGGCTAGGATTGATATTGTTGC 59.185 43.478 0.00 0.00 0.00 4.17
498 499 4.067896 CGGCTAGGATTGATATTGTTGCT 58.932 43.478 0.00 0.00 0.00 3.91
499 500 5.221641 ACGGCTAGGATTGATATTGTTGCTA 60.222 40.000 0.00 0.00 0.00 3.49
500 501 5.877012 CGGCTAGGATTGATATTGTTGCTAT 59.123 40.000 0.00 0.00 0.00 2.97
501 502 7.041721 CGGCTAGGATTGATATTGTTGCTATA 58.958 38.462 0.00 0.00 0.00 1.31
502 503 7.549134 CGGCTAGGATTGATATTGTTGCTATAA 59.451 37.037 0.00 0.00 0.00 0.98
503 504 9.401058 GGCTAGGATTGATATTGTTGCTATAAT 57.599 33.333 0.00 0.00 0.00 1.28
552 553 8.459911 TGTATAGATATTCTGAGTCGGTTTGA 57.540 34.615 0.00 0.00 0.00 2.69
555 556 8.824159 ATAGATATTCTGAGTCGGTTTGATTG 57.176 34.615 0.00 0.00 0.00 2.67
560 561 2.549754 CTGAGTCGGTTTGATTGTGCTT 59.450 45.455 0.00 0.00 0.00 3.91
569 570 4.441356 GGTTTGATTGTGCTTCCACTTCAA 60.441 41.667 7.94 7.94 42.54 2.69
574 575 3.988379 TGTGCTTCCACTTCAATTCAC 57.012 42.857 0.00 0.00 42.54 3.18
592 593 4.238761 TCACTGTAGTCACTTTCTTCGG 57.761 45.455 0.00 0.00 0.00 4.30
597 598 2.545537 AGTCACTTTCTTCGGGTTCC 57.454 50.000 0.00 0.00 0.00 3.62
599 600 1.871676 GTCACTTTCTTCGGGTTCCAC 59.128 52.381 0.00 0.00 0.00 4.02
607 608 1.475280 CTTCGGGTTCCACGACATCTA 59.525 52.381 0.00 0.00 40.45 1.98
608 609 0.813184 TCGGGTTCCACGACATCTAC 59.187 55.000 0.00 0.00 35.12 2.59
609 610 0.815734 CGGGTTCCACGACATCTACT 59.184 55.000 0.00 0.00 0.00 2.57
611 612 2.353406 CGGGTTCCACGACATCTACTTT 60.353 50.000 0.00 0.00 0.00 2.66
612 613 3.259902 GGGTTCCACGACATCTACTTTC 58.740 50.000 0.00 0.00 0.00 2.62
615 616 3.587797 TCCACGACATCTACTTTCCAC 57.412 47.619 0.00 0.00 0.00 4.02
616 617 3.162666 TCCACGACATCTACTTTCCACT 58.837 45.455 0.00 0.00 0.00 4.00
617 618 3.056821 TCCACGACATCTACTTTCCACTG 60.057 47.826 0.00 0.00 0.00 3.66
618 619 3.306088 CCACGACATCTACTTTCCACTGT 60.306 47.826 0.00 0.00 0.00 3.55
619 620 4.082408 CCACGACATCTACTTTCCACTGTA 60.082 45.833 0.00 0.00 0.00 2.74
622 623 5.106237 ACGACATCTACTTTCCACTGTAGTC 60.106 44.000 0.00 0.00 37.83 2.59
623 624 5.106277 CGACATCTACTTTCCACTGTAGTCA 60.106 44.000 0.00 0.00 37.83 3.41
625 626 5.775701 ACATCTACTTTCCACTGTAGTCACT 59.224 40.000 0.00 0.00 37.83 3.41
626 627 6.267928 ACATCTACTTTCCACTGTAGTCACTT 59.732 38.462 0.00 0.00 37.83 3.16
649 650 6.783708 TTTTTCTCCTTTCCAGCTTGTTAA 57.216 33.333 0.00 0.00 0.00 2.01
690 691 1.694150 GCTATGTGGGCTAGTGATCCA 59.306 52.381 0.00 0.00 0.00 3.41
692 693 3.515502 GCTATGTGGGCTAGTGATCCATA 59.484 47.826 0.00 0.00 32.71 2.74
693 694 4.163078 GCTATGTGGGCTAGTGATCCATAT 59.837 45.833 0.00 0.00 36.56 1.78
694 695 5.338708 GCTATGTGGGCTAGTGATCCATATT 60.339 44.000 9.56 0.00 34.83 1.28
695 696 4.356405 TGTGGGCTAGTGATCCATATTG 57.644 45.455 0.00 0.00 32.71 1.90
697 698 4.904853 TGTGGGCTAGTGATCCATATTGTA 59.095 41.667 0.00 0.00 32.71 2.41
698 699 5.221641 TGTGGGCTAGTGATCCATATTGTAC 60.222 44.000 0.00 0.00 32.71 2.90
703 728 7.041098 GGGCTAGTGATCCATATTGTACTTTTG 60.041 40.741 0.00 0.00 0.00 2.44
709 734 8.303876 GTGATCCATATTGTACTTTTGTTGGTT 58.696 33.333 0.00 0.00 0.00 3.67
710 735 9.521841 TGATCCATATTGTACTTTTGTTGGTTA 57.478 29.630 0.00 0.00 0.00 2.85
723 748 7.807907 ACTTTTGTTGGTTATTCTCTTATTGCG 59.192 33.333 0.00 0.00 0.00 4.85
726 751 5.123186 TGTTGGTTATTCTCTTATTGCGTGG 59.877 40.000 0.00 0.00 0.00 4.94
745 770 4.868067 GTGGAAGACGAAGAAACAGACTA 58.132 43.478 0.00 0.00 0.00 2.59
746 771 5.471257 GTGGAAGACGAAGAAACAGACTAT 58.529 41.667 0.00 0.00 0.00 2.12
751 776 9.152595 GGAAGACGAAGAAACAGACTATAATTT 57.847 33.333 0.00 0.00 0.00 1.82
755 780 8.842358 ACGAAGAAACAGACTATAATTTTCCA 57.158 30.769 0.00 0.00 0.00 3.53
764 789 8.462016 ACAGACTATAATTTTCCATTCAAGTGC 58.538 33.333 0.00 0.00 0.00 4.40
765 790 7.917505 CAGACTATAATTTTCCATTCAAGTGCC 59.082 37.037 0.00 0.00 0.00 5.01
766 791 6.795399 ACTATAATTTTCCATTCAAGTGCCG 58.205 36.000 0.00 0.00 0.00 5.69
787 812 1.226974 GCCGAGTTGCGAGCTATGA 60.227 57.895 0.00 0.00 44.57 2.15
789 814 0.872021 CCGAGTTGCGAGCTATGACC 60.872 60.000 0.00 0.00 44.57 4.02
798 823 0.030908 GAGCTATGACCCTTCCGACG 59.969 60.000 0.00 0.00 0.00 5.12
799 824 1.067582 GCTATGACCCTTCCGACGG 59.932 63.158 7.84 7.84 0.00 4.79
800 825 1.067582 CTATGACCCTTCCGACGGC 59.932 63.158 9.66 0.00 0.00 5.68
801 826 1.672854 CTATGACCCTTCCGACGGCA 61.673 60.000 9.66 0.00 0.00 5.69
804 829 1.598685 GACCCTTCCGACGGCAAAA 60.599 57.895 9.66 0.00 0.00 2.44
805 830 1.574702 GACCCTTCCGACGGCAAAAG 61.575 60.000 9.66 7.94 0.00 2.27
807 832 1.574428 CCTTCCGACGGCAAAAGTG 59.426 57.895 9.66 0.00 0.00 3.16
809 834 1.156736 CTTCCGACGGCAAAAGTGAT 58.843 50.000 9.66 0.00 0.00 3.06
810 835 1.535462 CTTCCGACGGCAAAAGTGATT 59.465 47.619 9.66 0.00 0.00 2.57
829 1431 4.812091 TGATTTGATTACGATGGTTACGGG 59.188 41.667 0.00 0.00 34.93 5.28
832 1434 3.289836 TGATTACGATGGTTACGGGAGA 58.710 45.455 0.00 0.00 34.93 3.71
834 1436 3.788333 TTACGATGGTTACGGGAGAAG 57.212 47.619 0.00 0.00 34.93 2.85
903 1759 0.457035 TTATAAGCTCGCCGTTCCGT 59.543 50.000 0.00 0.00 0.00 4.69
904 1760 0.248743 TATAAGCTCGCCGTTCCGTG 60.249 55.000 0.00 0.00 0.00 4.94
983 1843 4.282957 CCCAATCAAGATCTAGCTCAGCTA 59.717 45.833 6.15 6.15 40.44 3.32
1041 1901 1.630244 CGTGCTTCTTCGCCTTCCTG 61.630 60.000 0.00 0.00 0.00 3.86
1532 2392 1.076485 GGCCACGGTCTACCTCCTA 60.076 63.158 0.00 0.00 0.00 2.94
1775 2635 1.731969 GTCACCGGTGTACACGCTC 60.732 63.158 32.74 11.15 0.00 5.03
1947 2807 0.462759 GGCAGCCCACAGATACAGAC 60.463 60.000 0.00 0.00 0.00 3.51
2015 2875 7.707893 CGATCAATTCATTCCCTTATTTTTGCT 59.292 33.333 0.00 0.00 0.00 3.91
2156 3037 5.429130 AGTCCTCCCGAAAGAAATGTATTC 58.571 41.667 0.00 0.00 0.00 1.75
2159 3040 4.270325 CCTCCCGAAAGAAATGTATTCGTC 59.730 45.833 6.42 0.00 43.16 4.20
2160 3041 5.080969 TCCCGAAAGAAATGTATTCGTCT 57.919 39.130 6.42 0.00 43.16 4.18
2161 3042 5.484715 TCCCGAAAGAAATGTATTCGTCTT 58.515 37.500 6.42 0.00 43.16 3.01
2162 3043 5.579511 TCCCGAAAGAAATGTATTCGTCTTC 59.420 40.000 6.42 0.00 43.16 2.87
2163 3044 5.581085 CCCGAAAGAAATGTATTCGTCTTCT 59.419 40.000 6.42 0.00 43.16 2.85
2164 3045 6.237861 CCCGAAAGAAATGTATTCGTCTTCTC 60.238 42.308 6.42 0.00 43.16 2.87
2255 3139 1.052287 CAACAAAAGCATTCGCCGAC 58.948 50.000 0.00 0.00 39.83 4.79
2263 3147 3.379445 ATTCGCCGACCAGTCCGT 61.379 61.111 0.00 0.00 0.00 4.69
2477 3361 3.502595 CGGTATAGCGAGAATTCCAGAGA 59.497 47.826 19.22 0.00 0.00 3.10
2500 3384 1.316706 ACTGCCTCTAGACAGTCGGC 61.317 60.000 11.99 11.99 43.55 5.54
2885 3770 2.010043 GCCCACATCACGGTTACGAAT 61.010 52.381 0.00 0.00 44.60 3.34
2951 3836 2.589442 GTCCACGTTTGCGGGTGA 60.589 61.111 0.00 0.00 40.49 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.101049 ATGTAAAATCGCCGCCTGGG 61.101 55.000 0.00 0.00 39.58 4.45
7 8 0.029300 CATGTAAAATCGCCGCCTGG 59.971 55.000 0.00 0.00 38.77 4.45
8 9 0.592247 GCATGTAAAATCGCCGCCTG 60.592 55.000 0.00 0.00 0.00 4.85
9 10 1.724582 GGCATGTAAAATCGCCGCCT 61.725 55.000 0.00 0.00 34.26 5.52
10 11 1.299089 GGCATGTAAAATCGCCGCC 60.299 57.895 0.00 0.00 34.26 6.13
11 12 1.299089 GGGCATGTAAAATCGCCGC 60.299 57.895 0.00 0.00 45.85 6.53
12 13 1.358759 GGGGCATGTAAAATCGCCG 59.641 57.895 0.00 0.00 45.85 6.46
13 14 0.755327 AGGGGGCATGTAAAATCGCC 60.755 55.000 0.00 0.00 44.10 5.54
14 15 0.385390 CAGGGGGCATGTAAAATCGC 59.615 55.000 0.00 0.00 0.00 4.58
15 16 1.032014 CCAGGGGGCATGTAAAATCG 58.968 55.000 0.00 0.00 0.00 3.34
16 17 1.413118 CCCAGGGGGCATGTAAAATC 58.587 55.000 0.00 0.00 35.35 2.17
17 18 3.633137 CCCAGGGGGCATGTAAAAT 57.367 52.632 0.00 0.00 35.35 1.82
39 40 1.737838 TAGAGCATTTCCAGCCGTTG 58.262 50.000 0.00 0.00 0.00 4.10
40 41 2.489938 TTAGAGCATTTCCAGCCGTT 57.510 45.000 0.00 0.00 0.00 4.44
41 42 2.092968 TCATTAGAGCATTTCCAGCCGT 60.093 45.455 0.00 0.00 0.00 5.68
42 43 2.564771 TCATTAGAGCATTTCCAGCCG 58.435 47.619 0.00 0.00 0.00 5.52
43 44 3.305199 GCATCATTAGAGCATTTCCAGCC 60.305 47.826 0.00 0.00 0.00 4.85
44 45 3.317149 TGCATCATTAGAGCATTTCCAGC 59.683 43.478 0.00 0.00 32.55 4.85
45 46 5.509716 TTGCATCATTAGAGCATTTCCAG 57.490 39.130 0.00 0.00 38.19 3.86
46 47 6.474140 AATTGCATCATTAGAGCATTTCCA 57.526 33.333 0.00 0.00 38.19 3.53
47 48 6.585322 GCTAATTGCATCATTAGAGCATTTCC 59.415 38.462 18.32 0.00 42.31 3.13
48 49 7.326305 CAGCTAATTGCATCATTAGAGCATTTC 59.674 37.037 18.32 3.19 45.94 2.17
49 50 7.145985 CAGCTAATTGCATCATTAGAGCATTT 58.854 34.615 18.32 0.00 45.94 2.32
50 51 6.678878 CAGCTAATTGCATCATTAGAGCATT 58.321 36.000 18.32 1.11 45.94 3.56
51 52 5.335740 GCAGCTAATTGCATCATTAGAGCAT 60.336 40.000 18.32 2.59 45.94 3.79
52 53 4.023450 GCAGCTAATTGCATCATTAGAGCA 60.023 41.667 18.32 0.00 45.94 4.26
53 54 4.474113 GCAGCTAATTGCATCATTAGAGC 58.526 43.478 18.32 16.30 45.94 4.09
54 55 4.378149 CCGCAGCTAATTGCATCATTAGAG 60.378 45.833 18.32 11.98 44.28 2.43
55 56 3.499537 CCGCAGCTAATTGCATCATTAGA 59.500 43.478 18.32 0.00 44.28 2.10
56 57 3.818387 CCGCAGCTAATTGCATCATTAG 58.182 45.455 12.09 12.09 44.28 1.73
57 58 2.030893 GCCGCAGCTAATTGCATCATTA 60.031 45.455 0.00 0.00 44.28 1.90
58 59 1.269413 GCCGCAGCTAATTGCATCATT 60.269 47.619 0.00 0.00 44.28 2.57
59 60 0.313043 GCCGCAGCTAATTGCATCAT 59.687 50.000 0.00 0.00 44.28 2.45
60 61 1.727511 GGCCGCAGCTAATTGCATCA 61.728 55.000 0.00 0.00 44.28 3.07
61 62 1.008079 GGCCGCAGCTAATTGCATC 60.008 57.895 0.00 0.00 44.28 3.91
62 63 1.111116 ATGGCCGCAGCTAATTGCAT 61.111 50.000 0.00 0.00 44.28 3.96
63 64 1.321805 AATGGCCGCAGCTAATTGCA 61.322 50.000 0.00 0.00 44.28 4.08
64 65 0.667993 TAATGGCCGCAGCTAATTGC 59.332 50.000 0.00 0.00 43.29 3.56
65 66 1.335324 GCTAATGGCCGCAGCTAATTG 60.335 52.381 14.07 0.00 39.73 2.32
66 67 0.954452 GCTAATGGCCGCAGCTAATT 59.046 50.000 14.07 2.11 39.73 1.40
67 68 2.633860 GCTAATGGCCGCAGCTAAT 58.366 52.632 14.07 0.00 39.73 1.73
68 69 4.141144 GCTAATGGCCGCAGCTAA 57.859 55.556 14.07 0.00 39.73 3.09
77 78 5.878133 GTCTACTATACGTAGGCTAATGGC 58.122 45.833 0.08 0.00 45.33 4.40
85 86 3.123284 GCGAGCTGTCTACTATACGTAGG 59.877 52.174 0.08 0.00 44.66 3.18
86 87 3.989167 AGCGAGCTGTCTACTATACGTAG 59.011 47.826 0.08 0.00 45.68 3.51
87 88 3.987547 AGCGAGCTGTCTACTATACGTA 58.012 45.455 0.00 0.00 0.00 3.57
88 89 2.836262 AGCGAGCTGTCTACTATACGT 58.164 47.619 0.00 0.00 0.00 3.57
89 90 4.986875 TTAGCGAGCTGTCTACTATACG 57.013 45.455 7.99 0.00 0.00 3.06
90 91 7.648510 ACATTTTTAGCGAGCTGTCTACTATAC 59.351 37.037 7.99 0.00 0.00 1.47
91 92 7.713750 ACATTTTTAGCGAGCTGTCTACTATA 58.286 34.615 7.99 0.00 0.00 1.31
92 93 6.574350 ACATTTTTAGCGAGCTGTCTACTAT 58.426 36.000 7.99 0.00 0.00 2.12
93 94 5.962433 ACATTTTTAGCGAGCTGTCTACTA 58.038 37.500 7.99 0.00 0.00 1.82
94 95 4.822026 ACATTTTTAGCGAGCTGTCTACT 58.178 39.130 7.99 0.00 0.00 2.57
95 96 5.120208 TGAACATTTTTAGCGAGCTGTCTAC 59.880 40.000 7.99 0.00 0.00 2.59
96 97 5.234752 TGAACATTTTTAGCGAGCTGTCTA 58.765 37.500 7.99 0.00 0.00 2.59
97 98 4.065088 TGAACATTTTTAGCGAGCTGTCT 58.935 39.130 7.99 0.00 0.00 3.41
98 99 4.404507 TGAACATTTTTAGCGAGCTGTC 57.595 40.909 7.99 0.00 0.00 3.51
99 100 4.829064 TTGAACATTTTTAGCGAGCTGT 57.171 36.364 7.99 0.00 0.00 4.40
100 101 4.560035 CCATTGAACATTTTTAGCGAGCTG 59.440 41.667 7.99 0.00 0.00 4.24
101 102 4.380867 CCCATTGAACATTTTTAGCGAGCT 60.381 41.667 2.25 2.25 0.00 4.09
102 103 3.859386 CCCATTGAACATTTTTAGCGAGC 59.141 43.478 0.00 0.00 0.00 5.03
103 104 3.859386 GCCCATTGAACATTTTTAGCGAG 59.141 43.478 0.00 0.00 0.00 5.03
104 105 3.671971 CGCCCATTGAACATTTTTAGCGA 60.672 43.478 0.00 0.00 42.20 4.93
105 106 2.598192 CGCCCATTGAACATTTTTAGCG 59.402 45.455 0.00 0.00 0.00 4.26
106 107 3.843999 TCGCCCATTGAACATTTTTAGC 58.156 40.909 0.00 0.00 0.00 3.09
107 108 3.859386 GCTCGCCCATTGAACATTTTTAG 59.141 43.478 0.00 0.00 0.00 1.85
108 109 3.509575 AGCTCGCCCATTGAACATTTTTA 59.490 39.130 0.00 0.00 0.00 1.52
109 110 2.299867 AGCTCGCCCATTGAACATTTTT 59.700 40.909 0.00 0.00 0.00 1.94
110 111 1.895131 AGCTCGCCCATTGAACATTTT 59.105 42.857 0.00 0.00 0.00 1.82
111 112 1.549203 AGCTCGCCCATTGAACATTT 58.451 45.000 0.00 0.00 0.00 2.32
112 113 2.418368 TAGCTCGCCCATTGAACATT 57.582 45.000 0.00 0.00 0.00 2.71
113 114 2.620115 CAATAGCTCGCCCATTGAACAT 59.380 45.455 0.00 0.00 32.54 2.71
114 115 2.016318 CAATAGCTCGCCCATTGAACA 58.984 47.619 0.00 0.00 32.54 3.18
115 116 1.334869 CCAATAGCTCGCCCATTGAAC 59.665 52.381 7.58 0.00 32.54 3.18
116 117 1.679139 CCAATAGCTCGCCCATTGAA 58.321 50.000 7.58 0.00 32.54 2.69
117 118 0.819259 GCCAATAGCTCGCCCATTGA 60.819 55.000 7.58 0.00 38.99 2.57
118 119 1.102809 TGCCAATAGCTCGCCCATTG 61.103 55.000 0.00 0.00 44.23 2.82
119 120 0.820891 CTGCCAATAGCTCGCCCATT 60.821 55.000 0.00 0.00 44.23 3.16
120 121 1.228063 CTGCCAATAGCTCGCCCAT 60.228 57.895 0.00 0.00 44.23 4.00
121 122 2.190313 CTGCCAATAGCTCGCCCA 59.810 61.111 0.00 0.00 44.23 5.36
122 123 2.592861 CCTGCCAATAGCTCGCCC 60.593 66.667 0.00 0.00 44.23 6.13
123 124 2.592861 CCCTGCCAATAGCTCGCC 60.593 66.667 0.00 0.00 44.23 5.54
124 125 2.592861 CCCCTGCCAATAGCTCGC 60.593 66.667 0.00 0.00 44.23 5.03
125 126 1.097547 CAACCCCTGCCAATAGCTCG 61.098 60.000 0.00 0.00 44.23 5.03
126 127 0.255890 TCAACCCCTGCCAATAGCTC 59.744 55.000 0.00 0.00 44.23 4.09
127 128 0.034089 GTCAACCCCTGCCAATAGCT 60.034 55.000 0.00 0.00 44.23 3.32
128 129 1.037579 GGTCAACCCCTGCCAATAGC 61.038 60.000 0.00 0.00 44.14 2.97
129 130 0.748005 CGGTCAACCCCTGCCAATAG 60.748 60.000 0.00 0.00 0.00 1.73
130 131 1.202099 TCGGTCAACCCCTGCCAATA 61.202 55.000 0.00 0.00 0.00 1.90
131 132 2.035626 CGGTCAACCCCTGCCAAT 59.964 61.111 0.00 0.00 0.00 3.16
132 133 3.172106 TCGGTCAACCCCTGCCAA 61.172 61.111 0.00 0.00 0.00 4.52
133 134 3.636231 CTCGGTCAACCCCTGCCA 61.636 66.667 0.00 0.00 0.00 4.92
135 136 3.842925 TTGCTCGGTCAACCCCTGC 62.843 63.158 0.00 0.00 0.00 4.85
136 137 1.002134 ATTGCTCGGTCAACCCCTG 60.002 57.895 0.00 0.00 0.00 4.45
137 138 1.002134 CATTGCTCGGTCAACCCCT 60.002 57.895 0.00 0.00 0.00 4.79
138 139 2.700773 GCATTGCTCGGTCAACCCC 61.701 63.158 0.16 0.00 0.00 4.95
139 140 0.392461 TAGCATTGCTCGGTCAACCC 60.392 55.000 15.81 0.00 40.44 4.11
140 141 0.727398 GTAGCATTGCTCGGTCAACC 59.273 55.000 15.81 0.00 40.44 3.77
141 142 1.128692 GTGTAGCATTGCTCGGTCAAC 59.871 52.381 15.81 7.23 40.44 3.18
142 143 1.438651 GTGTAGCATTGCTCGGTCAA 58.561 50.000 15.81 0.00 40.44 3.18
143 144 0.391130 GGTGTAGCATTGCTCGGTCA 60.391 55.000 15.81 7.90 40.44 4.02
144 145 0.108138 AGGTGTAGCATTGCTCGGTC 60.108 55.000 15.81 4.30 40.44 4.79
145 146 1.191535 TAGGTGTAGCATTGCTCGGT 58.808 50.000 15.81 0.00 40.44 4.69
146 147 2.138320 CATAGGTGTAGCATTGCTCGG 58.862 52.381 15.81 0.00 40.44 4.63
147 148 2.826428 ACATAGGTGTAGCATTGCTCG 58.174 47.619 15.81 0.00 40.44 5.03
157 158 6.882656 ACGTAAGAGTCTCTACATAGGTGTA 58.117 40.000 1.88 0.00 39.46 2.90
158 159 5.743117 ACGTAAGAGTCTCTACATAGGTGT 58.257 41.667 1.88 0.00 41.13 4.16
159 160 6.202570 GGTACGTAAGAGTCTCTACATAGGTG 59.797 46.154 1.88 0.00 43.62 4.00
160 161 6.126940 TGGTACGTAAGAGTCTCTACATAGGT 60.127 42.308 1.88 6.70 43.62 3.08
161 162 6.286758 TGGTACGTAAGAGTCTCTACATAGG 58.713 44.000 1.88 0.90 43.62 2.57
162 163 7.966246 ATGGTACGTAAGAGTCTCTACATAG 57.034 40.000 1.88 0.00 43.62 2.23
163 164 9.433153 CATATGGTACGTAAGAGTCTCTACATA 57.567 37.037 1.88 4.83 43.62 2.29
164 165 7.937942 ACATATGGTACGTAAGAGTCTCTACAT 59.062 37.037 7.80 2.96 43.62 2.29
165 166 7.278135 ACATATGGTACGTAAGAGTCTCTACA 58.722 38.462 7.80 0.00 43.62 2.74
166 167 7.727331 ACATATGGTACGTAAGAGTCTCTAC 57.273 40.000 7.80 0.00 43.62 2.59
168 169 8.921353 ATTACATATGGTACGTAAGAGTCTCT 57.079 34.615 7.80 0.00 43.62 3.10
169 170 9.395707 CAATTACATATGGTACGTAAGAGTCTC 57.604 37.037 7.80 0.00 43.62 3.36
170 171 7.866393 GCAATTACATATGGTACGTAAGAGTCT 59.134 37.037 7.80 0.00 43.62 3.24
171 172 7.866393 AGCAATTACATATGGTACGTAAGAGTC 59.134 37.037 7.80 0.00 43.62 3.36
172 173 7.652105 CAGCAATTACATATGGTACGTAAGAGT 59.348 37.037 7.80 0.00 43.62 3.24
173 174 7.865889 TCAGCAATTACATATGGTACGTAAGAG 59.134 37.037 7.80 0.00 43.62 2.85
174 175 7.718525 TCAGCAATTACATATGGTACGTAAGA 58.281 34.615 7.80 0.00 43.62 2.10
176 177 8.896320 AATCAGCAATTACATATGGTACGTAA 57.104 30.769 7.80 0.00 0.00 3.18
177 178 8.769891 CAAATCAGCAATTACATATGGTACGTA 58.230 33.333 7.80 0.00 0.00 3.57
178 179 7.255104 CCAAATCAGCAATTACATATGGTACGT 60.255 37.037 7.80 0.00 0.00 3.57
179 180 7.077605 CCAAATCAGCAATTACATATGGTACG 58.922 38.462 7.80 0.00 0.00 3.67
180 181 6.863126 GCCAAATCAGCAATTACATATGGTAC 59.137 38.462 7.80 0.00 0.00 3.34
181 182 6.548993 TGCCAAATCAGCAATTACATATGGTA 59.451 34.615 7.80 0.00 37.28 3.25
182 183 5.363292 TGCCAAATCAGCAATTACATATGGT 59.637 36.000 7.80 0.00 37.28 3.55
183 184 5.845103 TGCCAAATCAGCAATTACATATGG 58.155 37.500 7.80 0.00 37.28 2.74
184 185 6.509656 ACTGCCAAATCAGCAATTACATATG 58.490 36.000 0.00 0.00 40.35 1.78
185 186 6.720112 ACTGCCAAATCAGCAATTACATAT 57.280 33.333 0.00 0.00 40.35 1.78
186 187 6.528537 AACTGCCAAATCAGCAATTACATA 57.471 33.333 0.00 0.00 40.35 2.29
187 188 5.410355 AACTGCCAAATCAGCAATTACAT 57.590 34.783 0.00 0.00 40.35 2.29
188 189 4.870123 AACTGCCAAATCAGCAATTACA 57.130 36.364 0.00 0.00 40.35 2.41
189 190 6.544038 AAAAACTGCCAAATCAGCAATTAC 57.456 33.333 0.00 0.00 40.35 1.89
190 191 8.845413 ATTAAAAACTGCCAAATCAGCAATTA 57.155 26.923 0.00 0.00 40.35 1.40
191 192 7.748691 ATTAAAAACTGCCAAATCAGCAATT 57.251 28.000 0.00 0.00 40.35 2.32
192 193 7.748691 AATTAAAAACTGCCAAATCAGCAAT 57.251 28.000 0.00 0.00 40.35 3.56
193 194 7.930865 ACTAATTAAAAACTGCCAAATCAGCAA 59.069 29.630 0.00 0.00 40.35 3.91
194 195 7.441017 ACTAATTAAAAACTGCCAAATCAGCA 58.559 30.769 0.00 0.00 37.59 4.41
195 196 7.598493 TGACTAATTAAAAACTGCCAAATCAGC 59.402 33.333 0.00 0.00 37.59 4.26
196 197 9.643693 ATGACTAATTAAAAACTGCCAAATCAG 57.356 29.630 0.00 0.00 39.86 2.90
197 198 9.995003 AATGACTAATTAAAAACTGCCAAATCA 57.005 25.926 0.00 0.00 0.00 2.57
202 203 9.906660 CAACTAATGACTAATTAAAAACTGCCA 57.093 29.630 0.00 0.00 30.24 4.92
203 204 9.353999 CCAACTAATGACTAATTAAAAACTGCC 57.646 33.333 0.00 0.00 30.24 4.85
204 205 9.353999 CCCAACTAATGACTAATTAAAAACTGC 57.646 33.333 0.00 0.00 30.24 4.40
205 206 9.855021 CCCCAACTAATGACTAATTAAAAACTG 57.145 33.333 0.00 0.00 30.24 3.16
206 207 9.031537 CCCCCAACTAATGACTAATTAAAAACT 57.968 33.333 0.00 0.00 30.24 2.66
207 208 7.762615 GCCCCCAACTAATGACTAATTAAAAAC 59.237 37.037 0.00 0.00 30.24 2.43
208 209 7.455008 TGCCCCCAACTAATGACTAATTAAAAA 59.545 33.333 0.00 0.00 30.24 1.94
209 210 6.954684 TGCCCCCAACTAATGACTAATTAAAA 59.045 34.615 0.00 0.00 30.24 1.52
210 211 6.378848 GTGCCCCCAACTAATGACTAATTAAA 59.621 38.462 0.00 0.00 30.24 1.52
211 212 5.889289 GTGCCCCCAACTAATGACTAATTAA 59.111 40.000 0.00 0.00 30.24 1.40
212 213 5.442391 GTGCCCCCAACTAATGACTAATTA 58.558 41.667 0.00 0.00 0.00 1.40
213 214 4.278310 GTGCCCCCAACTAATGACTAATT 58.722 43.478 0.00 0.00 0.00 1.40
214 215 3.684413 CGTGCCCCCAACTAATGACTAAT 60.684 47.826 0.00 0.00 0.00 1.73
215 216 2.355310 CGTGCCCCCAACTAATGACTAA 60.355 50.000 0.00 0.00 0.00 2.24
216 217 1.208535 CGTGCCCCCAACTAATGACTA 59.791 52.381 0.00 0.00 0.00 2.59
217 218 0.035439 CGTGCCCCCAACTAATGACT 60.035 55.000 0.00 0.00 0.00 3.41
218 219 1.029947 CCGTGCCCCCAACTAATGAC 61.030 60.000 0.00 0.00 0.00 3.06
219 220 1.301623 CCGTGCCCCCAACTAATGA 59.698 57.895 0.00 0.00 0.00 2.57
220 221 1.752694 CCCGTGCCCCCAACTAATG 60.753 63.158 0.00 0.00 0.00 1.90
221 222 2.680965 CCCGTGCCCCCAACTAAT 59.319 61.111 0.00 0.00 0.00 1.73
222 223 4.354162 GCCCGTGCCCCCAACTAA 62.354 66.667 0.00 0.00 0.00 2.24
237 238 0.972471 CCTGATTTCAAGGGTGGGCC 60.972 60.000 0.00 0.00 0.00 5.80
238 239 0.972471 CCCTGATTTCAAGGGTGGGC 60.972 60.000 0.00 0.00 38.06 5.36
239 240 0.324645 CCCCTGATTTCAAGGGTGGG 60.325 60.000 6.13 1.21 41.68 4.61
240 241 0.324645 CCCCCTGATTTCAAGGGTGG 60.325 60.000 12.28 4.98 44.47 4.61
241 242 3.288099 CCCCCTGATTTCAAGGGTG 57.712 57.895 12.28 2.04 44.47 4.61
257 258 0.817654 GCACTAATCAAACTGCCCCC 59.182 55.000 0.00 0.00 0.00 5.40
258 259 1.839424 AGCACTAATCAAACTGCCCC 58.161 50.000 0.00 0.00 0.00 5.80
259 260 3.942130 AAAGCACTAATCAAACTGCCC 57.058 42.857 0.00 0.00 0.00 5.36
260 261 4.415735 GCTAAAGCACTAATCAAACTGCC 58.584 43.478 0.00 0.00 41.59 4.85
275 276 3.842732 ACCCACGTAATTTGCTAAAGC 57.157 42.857 0.00 0.00 42.50 3.51
276 277 5.413523 AGGTAACCCACGTAATTTGCTAAAG 59.586 40.000 0.00 0.00 37.17 1.85
277 278 5.315348 AGGTAACCCACGTAATTTGCTAAA 58.685 37.500 0.00 0.00 37.17 1.85
278 279 4.909001 AGGTAACCCACGTAATTTGCTAA 58.091 39.130 0.00 0.00 37.17 3.09
279 280 4.556592 AGGTAACCCACGTAATTTGCTA 57.443 40.909 0.00 0.00 37.17 3.49
280 281 3.428413 AGGTAACCCACGTAATTTGCT 57.572 42.857 0.00 0.00 37.17 3.91
281 282 4.696877 ACTTAGGTAACCCACGTAATTTGC 59.303 41.667 0.00 0.00 37.00 3.68
282 283 5.391203 GCACTTAGGTAACCCACGTAATTTG 60.391 44.000 0.00 0.00 37.00 2.32
283 284 4.696877 GCACTTAGGTAACCCACGTAATTT 59.303 41.667 0.00 0.00 37.00 1.82
284 285 4.019950 AGCACTTAGGTAACCCACGTAATT 60.020 41.667 0.00 0.00 37.00 1.40
285 286 3.516700 AGCACTTAGGTAACCCACGTAAT 59.483 43.478 0.00 0.00 37.00 1.89
286 287 2.899256 AGCACTTAGGTAACCCACGTAA 59.101 45.455 0.00 0.00 36.38 3.18
287 288 2.231964 CAGCACTTAGGTAACCCACGTA 59.768 50.000 0.00 0.00 37.17 3.57
288 289 1.001633 CAGCACTTAGGTAACCCACGT 59.998 52.381 0.00 0.00 37.17 4.49
289 290 1.001633 ACAGCACTTAGGTAACCCACG 59.998 52.381 0.00 0.00 37.17 4.94
290 291 2.853235 ACAGCACTTAGGTAACCCAC 57.147 50.000 0.00 0.00 37.17 4.61
291 292 2.289195 CGAACAGCACTTAGGTAACCCA 60.289 50.000 0.00 0.00 37.17 4.51
292 293 2.289257 ACGAACAGCACTTAGGTAACCC 60.289 50.000 0.00 0.00 37.17 4.11
293 294 3.036075 ACGAACAGCACTTAGGTAACC 57.964 47.619 0.00 0.00 37.17 2.85
294 295 4.171754 CCTACGAACAGCACTTAGGTAAC 58.828 47.826 0.00 0.00 0.00 2.50
295 296 3.828451 ACCTACGAACAGCACTTAGGTAA 59.172 43.478 0.00 0.00 39.53 2.85
296 297 3.424703 ACCTACGAACAGCACTTAGGTA 58.575 45.455 0.00 0.00 39.53 3.08
297 298 2.245582 ACCTACGAACAGCACTTAGGT 58.754 47.619 0.00 0.00 37.55 3.08
298 299 3.314541 AACCTACGAACAGCACTTAGG 57.685 47.619 0.00 0.00 36.01 2.69
299 300 4.326548 GCTAAACCTACGAACAGCACTTAG 59.673 45.833 0.00 0.00 0.00 2.18
300 301 4.240096 GCTAAACCTACGAACAGCACTTA 58.760 43.478 0.00 0.00 0.00 2.24
301 302 3.064931 GCTAAACCTACGAACAGCACTT 58.935 45.455 0.00 0.00 0.00 3.16
302 303 2.036733 TGCTAAACCTACGAACAGCACT 59.963 45.455 0.00 0.00 34.30 4.40
303 304 2.409975 TGCTAAACCTACGAACAGCAC 58.590 47.619 0.00 0.00 34.30 4.40
304 305 2.823924 TGCTAAACCTACGAACAGCA 57.176 45.000 0.00 0.00 36.72 4.41
305 306 4.680171 AAATGCTAAACCTACGAACAGC 57.320 40.909 0.00 0.00 0.00 4.40
306 307 5.856455 CCAAAAATGCTAAACCTACGAACAG 59.144 40.000 0.00 0.00 0.00 3.16
307 308 5.278561 CCCAAAAATGCTAAACCTACGAACA 60.279 40.000 0.00 0.00 0.00 3.18
308 309 5.158494 CCCAAAAATGCTAAACCTACGAAC 58.842 41.667 0.00 0.00 0.00 3.95
309 310 4.218852 CCCCAAAAATGCTAAACCTACGAA 59.781 41.667 0.00 0.00 0.00 3.85
310 311 3.759618 CCCCAAAAATGCTAAACCTACGA 59.240 43.478 0.00 0.00 0.00 3.43
311 312 3.119280 CCCCCAAAAATGCTAAACCTACG 60.119 47.826 0.00 0.00 0.00 3.51
312 313 3.835978 ACCCCCAAAAATGCTAAACCTAC 59.164 43.478 0.00 0.00 0.00 3.18
313 314 4.134933 ACCCCCAAAAATGCTAAACCTA 57.865 40.909 0.00 0.00 0.00 3.08
314 315 2.984672 ACCCCCAAAAATGCTAAACCT 58.015 42.857 0.00 0.00 0.00 3.50
315 316 3.071747 TCAACCCCCAAAAATGCTAAACC 59.928 43.478 0.00 0.00 0.00 3.27
316 317 4.062293 GTCAACCCCCAAAAATGCTAAAC 58.938 43.478 0.00 0.00 0.00 2.01
317 318 3.071747 GGTCAACCCCCAAAAATGCTAAA 59.928 43.478 0.00 0.00 0.00 1.85
318 319 2.635427 GGTCAACCCCCAAAAATGCTAA 59.365 45.455 0.00 0.00 0.00 3.09
319 320 2.252714 GGTCAACCCCCAAAAATGCTA 58.747 47.619 0.00 0.00 0.00 3.49
320 321 1.055849 GGTCAACCCCCAAAAATGCT 58.944 50.000 0.00 0.00 0.00 3.79
321 322 3.623848 GGTCAACCCCCAAAAATGC 57.376 52.632 0.00 0.00 0.00 3.56
333 334 4.021925 AGCCGAGCAGGGGTCAAC 62.022 66.667 0.34 0.00 41.48 3.18
337 338 3.394836 GAAGAGCCGAGCAGGGGT 61.395 66.667 0.00 0.00 41.48 4.95
338 339 4.521062 CGAAGAGCCGAGCAGGGG 62.521 72.222 0.34 0.00 41.48 4.79
356 357 0.456653 GCAAGTGCCATTGCGTTAGG 60.457 55.000 7.16 0.00 45.43 2.69
357 358 3.020102 GCAAGTGCCATTGCGTTAG 57.980 52.632 7.16 0.00 45.43 2.34
363 364 1.434555 CCATGTTGCAAGTGCCATTG 58.565 50.000 0.00 0.00 41.18 2.82
364 365 0.320946 GCCATGTTGCAAGTGCCATT 60.321 50.000 0.00 0.00 41.18 3.16
365 366 1.294138 GCCATGTTGCAAGTGCCAT 59.706 52.632 0.00 0.00 41.18 4.40
366 367 2.735883 GCCATGTTGCAAGTGCCA 59.264 55.556 0.00 0.00 41.18 4.92
367 368 2.431260 CGCCATGTTGCAAGTGCC 60.431 61.111 0.00 0.00 41.18 5.01
368 369 1.443194 CTCGCCATGTTGCAAGTGC 60.443 57.895 0.00 0.00 42.50 4.40
369 370 0.592637 TTCTCGCCATGTTGCAAGTG 59.407 50.000 0.00 1.62 0.00 3.16
370 371 1.538047 ATTCTCGCCATGTTGCAAGT 58.462 45.000 0.00 0.00 0.00 3.16
371 372 2.938451 TCTATTCTCGCCATGTTGCAAG 59.062 45.455 0.00 0.00 0.00 4.01
372 373 2.938451 CTCTATTCTCGCCATGTTGCAA 59.062 45.455 0.00 0.00 0.00 4.08
373 374 2.554142 CTCTATTCTCGCCATGTTGCA 58.446 47.619 0.00 0.00 0.00 4.08
374 375 1.869767 CCTCTATTCTCGCCATGTTGC 59.130 52.381 0.00 0.00 0.00 4.17
375 376 3.388308 CTCCTCTATTCTCGCCATGTTG 58.612 50.000 0.00 0.00 0.00 3.33
376 377 2.366916 CCTCCTCTATTCTCGCCATGTT 59.633 50.000 0.00 0.00 0.00 2.71
377 378 1.967066 CCTCCTCTATTCTCGCCATGT 59.033 52.381 0.00 0.00 0.00 3.21
378 379 1.967066 ACCTCCTCTATTCTCGCCATG 59.033 52.381 0.00 0.00 0.00 3.66
379 380 1.967066 CACCTCCTCTATTCTCGCCAT 59.033 52.381 0.00 0.00 0.00 4.40
380 381 1.342076 ACACCTCCTCTATTCTCGCCA 60.342 52.381 0.00 0.00 0.00 5.69
381 382 1.067821 CACACCTCCTCTATTCTCGCC 59.932 57.143 0.00 0.00 0.00 5.54
382 383 2.025155 TCACACCTCCTCTATTCTCGC 58.975 52.381 0.00 0.00 0.00 5.03
383 384 2.032302 CGTCACACCTCCTCTATTCTCG 59.968 54.545 0.00 0.00 0.00 4.04
384 385 3.018149 ACGTCACACCTCCTCTATTCTC 58.982 50.000 0.00 0.00 0.00 2.87
385 386 2.755655 CACGTCACACCTCCTCTATTCT 59.244 50.000 0.00 0.00 0.00 2.40
386 387 2.735762 GCACGTCACACCTCCTCTATTC 60.736 54.545 0.00 0.00 0.00 1.75
387 388 1.204941 GCACGTCACACCTCCTCTATT 59.795 52.381 0.00 0.00 0.00 1.73
388 389 0.818296 GCACGTCACACCTCCTCTAT 59.182 55.000 0.00 0.00 0.00 1.98
389 390 0.538746 TGCACGTCACACCTCCTCTA 60.539 55.000 0.00 0.00 0.00 2.43
390 391 1.810606 CTGCACGTCACACCTCCTCT 61.811 60.000 0.00 0.00 0.00 3.69
391 392 1.373497 CTGCACGTCACACCTCCTC 60.373 63.158 0.00 0.00 0.00 3.71
392 393 1.188219 ATCTGCACGTCACACCTCCT 61.188 55.000 0.00 0.00 0.00 3.69
393 394 1.016130 CATCTGCACGTCACACCTCC 61.016 60.000 0.00 0.00 0.00 4.30
394 395 1.630244 GCATCTGCACGTCACACCTC 61.630 60.000 0.00 0.00 41.59 3.85
395 396 1.669115 GCATCTGCACGTCACACCT 60.669 57.895 0.00 0.00 41.59 4.00
396 397 2.863153 GCATCTGCACGTCACACC 59.137 61.111 0.00 0.00 41.59 4.16
407 408 3.390183 TAGCCCGCACCTGCATCTG 62.390 63.158 0.00 0.00 42.21 2.90
408 409 3.083349 TAGCCCGCACCTGCATCT 61.083 61.111 0.00 0.00 42.21 2.90
409 410 2.897350 GTAGCCCGCACCTGCATC 60.897 66.667 0.00 0.00 42.21 3.91
410 411 4.489771 GGTAGCCCGCACCTGCAT 62.490 66.667 0.00 0.00 42.21 3.96
420 421 0.606604 TTCTCAGTGAACGGTAGCCC 59.393 55.000 0.00 0.00 0.00 5.19
421 422 2.541556 GATTCTCAGTGAACGGTAGCC 58.458 52.381 0.00 0.00 37.52 3.93
422 423 2.166664 AGGATTCTCAGTGAACGGTAGC 59.833 50.000 0.00 0.00 37.52 3.58
423 424 4.457834 AAGGATTCTCAGTGAACGGTAG 57.542 45.455 0.00 0.00 37.52 3.18
424 425 4.282449 TCAAAGGATTCTCAGTGAACGGTA 59.718 41.667 0.00 0.00 37.52 4.02
425 426 3.071023 TCAAAGGATTCTCAGTGAACGGT 59.929 43.478 0.00 0.00 37.52 4.83
426 427 3.664107 TCAAAGGATTCTCAGTGAACGG 58.336 45.455 0.00 0.00 37.52 4.44
427 428 5.869753 AATCAAAGGATTCTCAGTGAACG 57.130 39.130 0.00 0.00 39.55 3.95
446 447 9.134734 GTCTCATAAATCTATCGGTTGAGAATC 57.865 37.037 0.00 0.00 39.62 2.52
447 448 7.810282 CGTCTCATAAATCTATCGGTTGAGAAT 59.190 37.037 0.00 0.00 39.62 2.40
448 449 7.012989 TCGTCTCATAAATCTATCGGTTGAGAA 59.987 37.037 0.00 0.00 39.62 2.87
449 450 6.485648 TCGTCTCATAAATCTATCGGTTGAGA 59.514 38.462 0.00 0.00 36.65 3.27
450 451 6.669278 TCGTCTCATAAATCTATCGGTTGAG 58.331 40.000 0.00 0.00 0.00 3.02
451 452 6.628919 TCGTCTCATAAATCTATCGGTTGA 57.371 37.500 0.00 0.00 0.00 3.18
452 453 6.129431 CGTTCGTCTCATAAATCTATCGGTTG 60.129 42.308 0.00 0.00 0.00 3.77
453 454 5.913514 CGTTCGTCTCATAAATCTATCGGTT 59.086 40.000 0.00 0.00 0.00 4.44
454 455 5.450171 CGTTCGTCTCATAAATCTATCGGT 58.550 41.667 0.00 0.00 0.00 4.69
455 456 4.852104 CCGTTCGTCTCATAAATCTATCGG 59.148 45.833 0.00 0.00 0.00 4.18
456 457 4.321217 GCCGTTCGTCTCATAAATCTATCG 59.679 45.833 0.00 0.00 0.00 2.92
457 458 5.462405 AGCCGTTCGTCTCATAAATCTATC 58.538 41.667 0.00 0.00 0.00 2.08
458 459 5.455056 AGCCGTTCGTCTCATAAATCTAT 57.545 39.130 0.00 0.00 0.00 1.98
459 460 4.913335 AGCCGTTCGTCTCATAAATCTA 57.087 40.909 0.00 0.00 0.00 1.98
460 461 3.802948 AGCCGTTCGTCTCATAAATCT 57.197 42.857 0.00 0.00 0.00 2.40
461 462 3.982058 CCTAGCCGTTCGTCTCATAAATC 59.018 47.826 0.00 0.00 0.00 2.17
462 463 3.635373 TCCTAGCCGTTCGTCTCATAAAT 59.365 43.478 0.00 0.00 0.00 1.40
463 464 3.018856 TCCTAGCCGTTCGTCTCATAAA 58.981 45.455 0.00 0.00 0.00 1.40
464 465 2.646930 TCCTAGCCGTTCGTCTCATAA 58.353 47.619 0.00 0.00 0.00 1.90
465 466 2.336945 TCCTAGCCGTTCGTCTCATA 57.663 50.000 0.00 0.00 0.00 2.15
466 467 1.693627 ATCCTAGCCGTTCGTCTCAT 58.306 50.000 0.00 0.00 0.00 2.90
467 468 1.134367 CAATCCTAGCCGTTCGTCTCA 59.866 52.381 0.00 0.00 0.00 3.27
468 469 1.404391 TCAATCCTAGCCGTTCGTCTC 59.596 52.381 0.00 0.00 0.00 3.36
469 470 1.471119 TCAATCCTAGCCGTTCGTCT 58.529 50.000 0.00 0.00 0.00 4.18
470 471 2.510768 ATCAATCCTAGCCGTTCGTC 57.489 50.000 0.00 0.00 0.00 4.20
471 472 4.202223 ACAATATCAATCCTAGCCGTTCGT 60.202 41.667 0.00 0.00 0.00 3.85
472 473 4.307432 ACAATATCAATCCTAGCCGTTCG 58.693 43.478 0.00 0.00 0.00 3.95
473 474 5.560953 GCAACAATATCAATCCTAGCCGTTC 60.561 44.000 0.00 0.00 0.00 3.95
474 475 4.275936 GCAACAATATCAATCCTAGCCGTT 59.724 41.667 0.00 0.00 0.00 4.44
475 476 3.815401 GCAACAATATCAATCCTAGCCGT 59.185 43.478 0.00 0.00 0.00 5.68
476 477 4.067896 AGCAACAATATCAATCCTAGCCG 58.932 43.478 0.00 0.00 0.00 5.52
477 478 8.792830 TTATAGCAACAATATCAATCCTAGCC 57.207 34.615 0.00 0.00 0.00 3.93
523 524 9.961264 AACCGACTCAGAATATCTATACATCTA 57.039 33.333 0.00 0.00 0.00 1.98
524 525 8.871629 AACCGACTCAGAATATCTATACATCT 57.128 34.615 0.00 0.00 0.00 2.90
525 526 9.347934 CAAACCGACTCAGAATATCTATACATC 57.652 37.037 0.00 0.00 0.00 3.06
526 527 9.078990 TCAAACCGACTCAGAATATCTATACAT 57.921 33.333 0.00 0.00 0.00 2.29
527 528 8.459911 TCAAACCGACTCAGAATATCTATACA 57.540 34.615 0.00 0.00 0.00 2.29
528 529 9.915629 AATCAAACCGACTCAGAATATCTATAC 57.084 33.333 0.00 0.00 0.00 1.47
529 530 9.914131 CAATCAAACCGACTCAGAATATCTATA 57.086 33.333 0.00 0.00 0.00 1.31
530 531 8.424918 ACAATCAAACCGACTCAGAATATCTAT 58.575 33.333 0.00 0.00 0.00 1.98
531 532 7.706607 CACAATCAAACCGACTCAGAATATCTA 59.293 37.037 0.00 0.00 0.00 1.98
532 533 6.536582 CACAATCAAACCGACTCAGAATATCT 59.463 38.462 0.00 0.00 0.00 1.98
533 534 6.709643 CACAATCAAACCGACTCAGAATATC 58.290 40.000 0.00 0.00 0.00 1.63
540 541 2.254546 AGCACAATCAAACCGACTCA 57.745 45.000 0.00 0.00 0.00 3.41
546 547 3.068024 TGAAGTGGAAGCACAATCAAACC 59.932 43.478 0.00 0.00 0.00 3.27
552 553 4.586001 AGTGAATTGAAGTGGAAGCACAAT 59.414 37.500 0.00 0.00 33.50 2.71
555 556 3.316308 ACAGTGAATTGAAGTGGAAGCAC 59.684 43.478 0.00 0.00 0.00 4.40
560 561 5.070446 AGTGACTACAGTGAATTGAAGTGGA 59.930 40.000 0.00 0.00 0.00 4.02
569 570 5.230942 CCGAAGAAAGTGACTACAGTGAAT 58.769 41.667 0.00 0.00 0.00 2.57
574 575 3.662247 ACCCGAAGAAAGTGACTACAG 57.338 47.619 0.00 0.00 0.00 2.74
592 593 3.259902 GGAAAGTAGATGTCGTGGAACC 58.740 50.000 0.00 0.00 0.00 3.62
597 598 3.914312 ACAGTGGAAAGTAGATGTCGTG 58.086 45.455 0.00 0.00 0.00 4.35
599 600 5.106277 TGACTACAGTGGAAAGTAGATGTCG 60.106 44.000 6.60 0.00 40.02 4.35
626 627 6.783708 TTAACAAGCTGGAAAGGAGAAAAA 57.216 33.333 0.00 0.00 0.00 1.94
643 644 5.242434 TGAATAGGCTCGAAGCTTTAACAA 58.758 37.500 0.00 0.00 41.99 2.83
644 645 4.827692 TGAATAGGCTCGAAGCTTTAACA 58.172 39.130 0.00 0.00 41.99 2.41
649 650 3.726607 CATCTGAATAGGCTCGAAGCTT 58.273 45.455 0.00 0.00 41.99 3.74
654 655 3.829026 ACATAGCATCTGAATAGGCTCGA 59.171 43.478 0.00 0.00 37.79 4.04
656 657 4.252073 CCACATAGCATCTGAATAGGCTC 58.748 47.826 0.00 0.00 37.79 4.70
657 658 3.008813 CCCACATAGCATCTGAATAGGCT 59.991 47.826 0.00 0.00 40.26 4.58
659 660 3.008813 AGCCCACATAGCATCTGAATAGG 59.991 47.826 0.00 0.00 0.00 2.57
697 698 7.807907 CGCAATAAGAGAATAACCAACAAAAGT 59.192 33.333 0.00 0.00 0.00 2.66
698 699 7.807907 ACGCAATAAGAGAATAACCAACAAAAG 59.192 33.333 0.00 0.00 0.00 2.27
703 728 5.353123 TCCACGCAATAAGAGAATAACCAAC 59.647 40.000 0.00 0.00 0.00 3.77
709 734 5.041287 CGTCTTCCACGCAATAAGAGAATA 58.959 41.667 0.00 0.00 42.87 1.75
710 735 3.865745 CGTCTTCCACGCAATAAGAGAAT 59.134 43.478 0.00 0.00 42.87 2.40
723 748 3.718815 AGTCTGTTTCTTCGTCTTCCAC 58.281 45.455 0.00 0.00 0.00 4.02
741 766 6.912591 CGGCACTTGAATGGAAAATTATAGTC 59.087 38.462 0.00 0.00 0.00 2.59
745 770 5.163519 CCTCGGCACTTGAATGGAAAATTAT 60.164 40.000 0.00 0.00 0.00 1.28
746 771 4.157656 CCTCGGCACTTGAATGGAAAATTA 59.842 41.667 0.00 0.00 0.00 1.40
751 776 0.960364 GCCTCGGCACTTGAATGGAA 60.960 55.000 2.41 0.00 41.49 3.53
752 777 1.377202 GCCTCGGCACTTGAATGGA 60.377 57.895 2.41 0.00 41.49 3.41
755 780 2.436646 CGGCCTCGGCACTTGAAT 60.437 61.111 10.51 0.00 44.11 2.57
766 791 2.356818 ATAGCTCGCAACTCGGCCTC 62.357 60.000 0.00 0.00 39.05 4.70
778 803 0.030908 GTCGGAAGGGTCATAGCTCG 59.969 60.000 0.00 0.00 0.00 5.03
787 812 1.599797 CTTTTGCCGTCGGAAGGGT 60.600 57.895 17.49 0.00 32.78 4.34
789 814 0.882927 TCACTTTTGCCGTCGGAAGG 60.883 55.000 17.49 5.53 0.00 3.46
798 823 5.516339 CCATCGTAATCAAATCACTTTTGCC 59.484 40.000 0.00 0.00 43.68 4.52
799 824 6.092748 ACCATCGTAATCAAATCACTTTTGC 58.907 36.000 0.00 0.00 43.68 3.68
800 825 9.061610 GTAACCATCGTAATCAAATCACTTTTG 57.938 33.333 0.00 0.00 45.08 2.44
801 826 7.960738 CGTAACCATCGTAATCAAATCACTTTT 59.039 33.333 0.00 0.00 0.00 2.27
804 829 5.522460 CCGTAACCATCGTAATCAAATCACT 59.478 40.000 0.00 0.00 0.00 3.41
805 830 5.277154 CCCGTAACCATCGTAATCAAATCAC 60.277 44.000 0.00 0.00 0.00 3.06
807 832 5.051816 TCCCGTAACCATCGTAATCAAATC 58.948 41.667 0.00 0.00 0.00 2.17
809 834 4.160065 TCTCCCGTAACCATCGTAATCAAA 59.840 41.667 0.00 0.00 0.00 2.69
810 835 3.700539 TCTCCCGTAACCATCGTAATCAA 59.299 43.478 0.00 0.00 0.00 2.57
813 1415 3.703052 ACTTCTCCCGTAACCATCGTAAT 59.297 43.478 0.00 0.00 0.00 1.89
818 1420 4.824289 TGTAAACTTCTCCCGTAACCATC 58.176 43.478 0.00 0.00 0.00 3.51
829 1431 3.529085 GTGAACGCGTTGTAAACTTCTC 58.471 45.455 31.89 11.44 46.99 2.87
832 1434 1.331447 GGGTGAACGCGTTGTAAACTT 59.669 47.619 31.89 1.17 46.99 2.66
834 1436 0.656785 TGGGTGAACGCGTTGTAAAC 59.343 50.000 31.89 20.14 45.31 2.01
983 1843 2.693871 ATGGCCGGCTCAGGGATTT 61.694 57.895 28.56 3.50 0.00 2.17
1316 2176 0.886490 CGGTGGCTATCTTGATGGCC 60.886 60.000 24.90 24.90 46.86 5.36
1760 2620 4.712425 GCGAGCGTGTACACCGGT 62.712 66.667 20.11 18.87 38.96 5.28
1947 2807 3.376078 ATTGGGCAGCTTGGCGTG 61.376 61.111 0.00 0.00 44.78 5.34
2095 2975 9.787532 TTTCTTTCTGTCTGTTCTTTGTTAATG 57.212 29.630 0.00 0.00 0.00 1.90
2156 3037 6.928979 TTCCACTATCTAGAAGAGAAGACG 57.071 41.667 11.06 0.00 37.85 4.18
2159 3040 9.541143 GGAAATTTCCACTATCTAGAAGAGAAG 57.459 37.037 28.76 4.45 46.76 2.85
2255 3139 0.389948 GTAGCCTGTTGACGGACTGG 60.390 60.000 7.19 7.19 40.46 4.00
2263 3147 2.820178 TCCTGATCAGTAGCCTGTTGA 58.180 47.619 21.11 5.30 39.82 3.18
2477 3361 3.381908 CCGACTGTCTAGAGGCAGTTAAT 59.618 47.826 17.42 0.00 44.89 1.40
2593 3477 0.469705 ATGGTGCAAGCCAGTTCCAA 60.470 50.000 2.18 0.00 42.47 3.53
2684 3568 7.017645 CGCATATAAAGATAAACACTGATGCC 58.982 38.462 0.00 0.00 33.98 4.40
2885 3770 0.177141 CGGACAAGGAAAGGGCGATA 59.823 55.000 0.00 0.00 0.00 2.92
2951 3836 2.766263 TGATGTTCATCTACCTCGCCTT 59.234 45.455 12.94 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.