Multiple sequence alignment - TraesCS2D01G088800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G088800 chr2D 100.000 3358 0 0 1 3358 38636276 38639633 0.000000e+00 6202.0
1 TraesCS2D01G088800 chr2D 89.169 1505 84 26 809 2290 40903278 40901830 0.000000e+00 1803.0
2 TraesCS2D01G088800 chr2D 89.088 1448 80 31 809 2218 38782672 38781265 0.000000e+00 1727.0
3 TraesCS2D01G088800 chr2D 90.871 1205 74 9 951 2150 38678505 38679678 0.000000e+00 1583.0
4 TraesCS2D01G088800 chr2D 91.974 922 60 6 1217 2131 40849917 40850831 0.000000e+00 1280.0
5 TraesCS2D01G088800 chr2D 86.770 771 63 20 1608 2361 38685834 38685086 0.000000e+00 822.0
6 TraesCS2D01G088800 chr2D 90.736 421 8 15 520 913 38678092 38678508 1.770000e-147 532.0
7 TraesCS2D01G088800 chr2D 87.967 241 16 6 985 1222 40829572 40829802 4.270000e-69 272.0
8 TraesCS2D01G088800 chr2D 80.899 178 20 14 2192 2367 40851993 40852158 9.780000e-26 128.0
9 TraesCS2D01G088800 chr2D 79.888 179 22 9 2192 2367 38679668 38679835 5.890000e-23 119.0
10 TraesCS2D01G088800 chr2D 94.643 56 3 0 316 371 25325169 25325114 1.660000e-13 87.9
11 TraesCS2D01G088800 chr2B 87.392 1967 112 60 413 2312 67542441 67540544 0.000000e+00 2134.0
12 TraesCS2D01G088800 chr2B 88.477 1484 109 29 800 2262 67659156 67657714 0.000000e+00 1736.0
13 TraesCS2D01G088800 chr2B 89.392 1348 88 17 951 2290 67464467 67465767 0.000000e+00 1646.0
14 TraesCS2D01G088800 chr2B 90.159 691 44 12 942 1625 67424190 67424863 0.000000e+00 878.0
15 TraesCS2D01G088800 chr2B 92.437 119 4 2 800 913 67464352 67464470 7.450000e-37 165.0
16 TraesCS2D01G088800 chr2B 89.474 114 9 1 600 713 67423518 67423628 1.260000e-29 141.0
17 TraesCS2D01G088800 chr2B 89.474 57 1 4 650 705 67659358 67659306 2.160000e-07 67.6
18 TraesCS2D01G088800 chr2B 96.875 32 1 0 588 619 67423639 67423670 2.000000e-03 54.7
19 TraesCS2D01G088800 chr2A 91.598 1333 79 15 951 2263 43458319 43459638 0.000000e+00 1810.0
20 TraesCS2D01G088800 chr2A 91.810 1282 79 16 951 2221 43429563 43430829 0.000000e+00 1762.0
21 TraesCS2D01G088800 chr2A 90.481 977 58 17 1381 2351 43484026 43483079 0.000000e+00 1256.0
22 TraesCS2D01G088800 chr2A 89.498 438 36 7 951 1388 43489529 43489102 2.280000e-151 545.0
23 TraesCS2D01G088800 chr2A 87.755 441 38 10 482 913 43429133 43429566 5.000000e-138 501.0
24 TraesCS2D01G088800 chr2A 85.430 453 17 19 506 914 43457876 43458323 3.100000e-115 425.0
25 TraesCS2D01G088800 chr2A 100.000 41 0 0 479 519 43457822 43457862 3.590000e-10 76.8
26 TraesCS2D01G088800 chr1D 94.452 739 20 9 2640 3358 478468494 478467757 0.000000e+00 1118.0
27 TraesCS2D01G088800 chr1D 88.973 263 22 4 4 266 403232144 403231889 5.410000e-83 318.0
28 TraesCS2D01G088800 chr1D 85.338 266 28 9 2380 2642 481652541 481652798 7.140000e-67 265.0
29 TraesCS2D01G088800 chr6D 93.902 738 24 5 2642 3358 275384962 275384225 0.000000e+00 1094.0
30 TraesCS2D01G088800 chr6D 84.815 731 90 20 2636 3358 344937384 344938101 0.000000e+00 715.0
31 TraesCS2D01G088800 chr6D 90.769 260 18 3 1 260 35017461 35017208 3.210000e-90 342.0
32 TraesCS2D01G088800 chr6D 88.148 270 25 4 1 270 156441249 156440987 6.990000e-82 315.0
33 TraesCS2D01G088800 chr6D 83.186 226 32 6 2374 2596 93630950 93630728 5.680000e-48 202.0
34 TraesCS2D01G088800 chr4D 93.843 536 28 2 2642 3172 303755620 303755085 0.000000e+00 802.0
35 TraesCS2D01G088800 chr4D 85.007 707 85 19 2642 3339 34128981 34128287 0.000000e+00 699.0
36 TraesCS2D01G088800 chr4D 83.425 724 100 19 2642 3358 144928102 144928812 0.000000e+00 654.0
37 TraesCS2D01G088800 chr4D 87.266 267 28 1 1 267 324470646 324470906 1.960000e-77 300.0
38 TraesCS2D01G088800 chr7D 88.838 654 59 11 2691 3338 188128499 188129144 0.000000e+00 791.0
39 TraesCS2D01G088800 chr5D 92.857 532 35 2 2644 3172 401203846 401204377 0.000000e+00 769.0
40 TraesCS2D01G088800 chr5D 91.513 271 15 3 1 270 507874066 507873803 1.900000e-97 366.0
41 TraesCS2D01G088800 chr5D 92.829 251 15 2 1 248 507868507 507868257 8.860000e-96 361.0
42 TraesCS2D01G088800 chr1A 85.169 708 87 17 2642 3338 234718406 234717706 0.000000e+00 710.0
43 TraesCS2D01G088800 chr1A 84.789 710 89 16 2642 3338 444418163 444417460 0.000000e+00 695.0
44 TraesCS2D01G088800 chr1A 86.466 266 29 7 2379 2642 394592837 394592577 5.480000e-73 285.0
45 TraesCS2D01G088800 chr3D 90.654 535 38 8 2642 3172 49500290 49500816 0.000000e+00 701.0
46 TraesCS2D01G088800 chr3D 91.045 268 17 4 1 267 603684057 603684318 4.120000e-94 355.0
47 TraesCS2D01G088800 chr3D 93.644 236 13 2 1 235 36538821 36538587 5.330000e-93 351.0
48 TraesCS2D01G088800 chr3D 89.641 251 23 2 1 248 588073639 588073889 1.940000e-82 316.0
49 TraesCS2D01G088800 chr3D 86.207 261 32 4 2382 2641 283311228 283311485 2.550000e-71 279.0
50 TraesCS2D01G088800 chr5B 87.072 263 29 5 2381 2639 340615291 340615552 3.280000e-75 292.0
51 TraesCS2D01G088800 chr5B 92.000 75 6 0 307 381 491628303 491628229 4.580000e-19 106.0
52 TraesCS2D01G088800 chr7B 83.721 258 36 5 2381 2635 145369966 145370220 4.330000e-59 239.0
53 TraesCS2D01G088800 chr7B 81.273 267 39 11 2381 2641 517626818 517626557 4.390000e-49 206.0
54 TraesCS2D01G088800 chr7B 80.913 241 35 8 2377 2613 435096008 435096241 2.660000e-41 180.0
55 TraesCS2D01G088800 chr7B 97.368 38 1 0 272 309 678397 678360 7.780000e-07 65.8
56 TraesCS2D01G088800 chr4B 81.923 260 34 8 2382 2639 635682464 635682712 1.220000e-49 207.0
57 TraesCS2D01G088800 chr6A 88.889 63 7 0 309 371 143977061 143977123 9.990000e-11 78.7
58 TraesCS2D01G088800 chr1B 97.222 36 1 0 272 307 304186906 304186871 1.010000e-05 62.1
59 TraesCS2D01G088800 chr5A 97.143 35 1 0 272 306 647398369 647398403 3.620000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G088800 chr2D 38636276 38639633 3357 False 6202.000000 6202 100.000000 1 3358 1 chr2D.!!$F1 3357
1 TraesCS2D01G088800 chr2D 40901830 40903278 1448 True 1803.000000 1803 89.169000 809 2290 1 chr2D.!!$R4 1481
2 TraesCS2D01G088800 chr2D 38781265 38782672 1407 True 1727.000000 1727 89.088000 809 2218 1 chr2D.!!$R3 1409
3 TraesCS2D01G088800 chr2D 38685086 38685834 748 True 822.000000 822 86.770000 1608 2361 1 chr2D.!!$R2 753
4 TraesCS2D01G088800 chr2D 38678092 38679835 1743 False 744.666667 1583 87.165000 520 2367 3 chr2D.!!$F3 1847
5 TraesCS2D01G088800 chr2D 40849917 40852158 2241 False 704.000000 1280 86.436500 1217 2367 2 chr2D.!!$F4 1150
6 TraesCS2D01G088800 chr2B 67540544 67542441 1897 True 2134.000000 2134 87.392000 413 2312 1 chr2B.!!$R1 1899
7 TraesCS2D01G088800 chr2B 67464352 67465767 1415 False 905.500000 1646 90.914500 800 2290 2 chr2B.!!$F2 1490
8 TraesCS2D01G088800 chr2B 67657714 67659358 1644 True 901.800000 1736 88.975500 650 2262 2 chr2B.!!$R2 1612
9 TraesCS2D01G088800 chr2B 67423518 67424863 1345 False 357.900000 878 92.169333 588 1625 3 chr2B.!!$F1 1037
10 TraesCS2D01G088800 chr2A 43483079 43484026 947 True 1256.000000 1256 90.481000 1381 2351 1 chr2A.!!$R1 970
11 TraesCS2D01G088800 chr2A 43429133 43430829 1696 False 1131.500000 1762 89.782500 482 2221 2 chr2A.!!$F1 1739
12 TraesCS2D01G088800 chr2A 43457822 43459638 1816 False 770.600000 1810 92.342667 479 2263 3 chr2A.!!$F2 1784
13 TraesCS2D01G088800 chr1D 478467757 478468494 737 True 1118.000000 1118 94.452000 2640 3358 1 chr1D.!!$R2 718
14 TraesCS2D01G088800 chr6D 275384225 275384962 737 True 1094.000000 1094 93.902000 2642 3358 1 chr6D.!!$R4 716
15 TraesCS2D01G088800 chr6D 344937384 344938101 717 False 715.000000 715 84.815000 2636 3358 1 chr6D.!!$F1 722
16 TraesCS2D01G088800 chr4D 303755085 303755620 535 True 802.000000 802 93.843000 2642 3172 1 chr4D.!!$R2 530
17 TraesCS2D01G088800 chr4D 34128287 34128981 694 True 699.000000 699 85.007000 2642 3339 1 chr4D.!!$R1 697
18 TraesCS2D01G088800 chr4D 144928102 144928812 710 False 654.000000 654 83.425000 2642 3358 1 chr4D.!!$F1 716
19 TraesCS2D01G088800 chr7D 188128499 188129144 645 False 791.000000 791 88.838000 2691 3338 1 chr7D.!!$F1 647
20 TraesCS2D01G088800 chr5D 401203846 401204377 531 False 769.000000 769 92.857000 2644 3172 1 chr5D.!!$F1 528
21 TraesCS2D01G088800 chr1A 234717706 234718406 700 True 710.000000 710 85.169000 2642 3338 1 chr1A.!!$R1 696
22 TraesCS2D01G088800 chr1A 444417460 444418163 703 True 695.000000 695 84.789000 2642 3338 1 chr1A.!!$R3 696
23 TraesCS2D01G088800 chr3D 49500290 49500816 526 False 701.000000 701 90.654000 2642 3172 1 chr3D.!!$F1 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 189 0.036306 TCCGGGAAGAAGAACAAGGC 59.964 55.0 0.0 0.0 0.00 4.35 F
218 219 0.040646 TCCTCTAGGTGGCCGAAGAA 59.959 55.0 0.0 0.0 36.34 2.52 F
411 412 0.108138 GCGCCTGTTGGACATACTCT 60.108 55.0 0.0 0.0 34.57 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1900 2450 1.361993 CATCTCCTCCGCCTTCTCG 59.638 63.158 0.00 0.00 0.00 4.04 R
2014 2564 3.524648 GACGAGGTTGTGCCCGGAA 62.525 63.158 0.73 0.00 38.26 4.30 R
2392 4118 0.463474 GTGAAGCATCCAGGAGCTCC 60.463 60.000 26.22 26.22 40.90 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 3.006728 CTCCCCCAAGCACCGGTA 61.007 66.667 6.87 0.00 0.00 4.02
38 39 2.285818 TCCCCCAAGCACCGGTAT 60.286 61.111 6.87 0.00 0.00 2.73
39 40 2.192175 CCCCCAAGCACCGGTATC 59.808 66.667 6.87 1.51 0.00 2.24
40 41 2.203015 CCCCAAGCACCGGTATCG 60.203 66.667 6.87 0.00 0.00 2.92
41 42 2.895372 CCCAAGCACCGGTATCGC 60.895 66.667 6.87 7.12 34.56 4.58
42 43 2.125310 CCAAGCACCGGTATCGCA 60.125 61.111 16.80 0.00 34.56 5.10
43 44 2.461110 CCAAGCACCGGTATCGCAC 61.461 63.158 16.80 0.00 34.56 5.34
44 45 2.508439 AAGCACCGGTATCGCACG 60.508 61.111 16.80 0.00 34.56 5.34
52 53 3.192922 GTATCGCACGCGGCCTTT 61.193 61.111 12.47 0.27 40.31 3.11
53 54 2.435234 TATCGCACGCGGCCTTTT 60.435 55.556 12.47 0.00 40.31 2.27
54 55 2.457778 TATCGCACGCGGCCTTTTC 61.458 57.895 12.47 0.00 40.31 2.29
56 57 4.101790 CGCACGCGGCCTTTTCAT 62.102 61.111 12.47 0.00 40.31 2.57
57 58 2.504681 GCACGCGGCCTTTTCATG 60.505 61.111 12.47 0.00 36.11 3.07
58 59 2.504681 CACGCGGCCTTTTCATGC 60.505 61.111 12.47 0.00 0.00 4.06
59 60 3.747976 ACGCGGCCTTTTCATGCC 61.748 61.111 12.47 0.00 44.41 4.40
63 64 3.381136 GGCCTTTTCATGCCGCCA 61.381 61.111 0.00 0.00 39.50 5.69
64 65 2.125952 GCCTTTTCATGCCGCCAC 60.126 61.111 0.00 0.00 0.00 5.01
65 66 2.179018 CCTTTTCATGCCGCCACG 59.821 61.111 0.00 0.00 0.00 4.94
137 138 3.157949 CCCCCTCTCGAAGCTCCC 61.158 72.222 0.00 0.00 0.00 4.30
138 139 2.364317 CCCCTCTCGAAGCTCCCA 60.364 66.667 0.00 0.00 0.00 4.37
139 140 1.990060 CCCCTCTCGAAGCTCCCAA 60.990 63.158 0.00 0.00 0.00 4.12
140 141 1.553690 CCCCTCTCGAAGCTCCCAAA 61.554 60.000 0.00 0.00 0.00 3.28
141 142 0.543749 CCCTCTCGAAGCTCCCAAAT 59.456 55.000 0.00 0.00 0.00 2.32
142 143 1.661341 CCTCTCGAAGCTCCCAAATG 58.339 55.000 0.00 0.00 0.00 2.32
143 144 1.012841 CTCTCGAAGCTCCCAAATGC 58.987 55.000 0.00 0.00 0.00 3.56
144 145 0.740868 TCTCGAAGCTCCCAAATGCG 60.741 55.000 0.00 0.00 0.00 4.73
145 146 0.740868 CTCGAAGCTCCCAAATGCGA 60.741 55.000 0.00 0.00 0.00 5.10
146 147 1.019278 TCGAAGCTCCCAAATGCGAC 61.019 55.000 0.00 0.00 0.00 5.19
147 148 1.425428 GAAGCTCCCAAATGCGACG 59.575 57.895 0.00 0.00 0.00 5.12
148 149 2.583685 GAAGCTCCCAAATGCGACGC 62.584 60.000 14.19 14.19 0.00 5.19
149 150 4.520846 GCTCCCAAATGCGACGCG 62.521 66.667 16.14 3.53 0.00 6.01
150 151 3.864686 CTCCCAAATGCGACGCGG 61.865 66.667 16.14 9.87 0.00 6.46
170 171 3.056328 GAAGGCGGGCAAGGTGTC 61.056 66.667 3.78 0.00 0.00 3.67
171 172 4.660938 AAGGCGGGCAAGGTGTCC 62.661 66.667 3.78 0.00 39.19 4.02
176 177 3.961414 GGGCAAGGTGTCCGGGAA 61.961 66.667 0.00 0.00 29.54 3.97
177 178 2.359975 GGCAAGGTGTCCGGGAAG 60.360 66.667 0.00 0.00 0.00 3.46
178 179 2.747686 GCAAGGTGTCCGGGAAGA 59.252 61.111 0.00 0.00 0.00 2.87
179 180 1.072505 GCAAGGTGTCCGGGAAGAA 59.927 57.895 0.00 0.00 0.00 2.52
180 181 0.955919 GCAAGGTGTCCGGGAAGAAG 60.956 60.000 0.00 0.00 0.00 2.85
181 182 0.685097 CAAGGTGTCCGGGAAGAAGA 59.315 55.000 0.00 0.00 0.00 2.87
182 183 1.071699 CAAGGTGTCCGGGAAGAAGAA 59.928 52.381 0.00 0.00 0.00 2.52
183 184 0.685660 AGGTGTCCGGGAAGAAGAAC 59.314 55.000 0.00 0.00 0.00 3.01
184 185 0.395312 GGTGTCCGGGAAGAAGAACA 59.605 55.000 0.00 0.00 0.00 3.18
185 186 1.202722 GGTGTCCGGGAAGAAGAACAA 60.203 52.381 0.00 0.00 0.00 2.83
186 187 2.143925 GTGTCCGGGAAGAAGAACAAG 58.856 52.381 0.00 0.00 0.00 3.16
187 188 1.071699 TGTCCGGGAAGAAGAACAAGG 59.928 52.381 0.00 0.00 0.00 3.61
188 189 0.036306 TCCGGGAAGAAGAACAAGGC 59.964 55.000 0.00 0.00 0.00 4.35
189 190 1.298859 CCGGGAAGAAGAACAAGGCG 61.299 60.000 0.00 0.00 0.00 5.52
190 191 0.602905 CGGGAAGAAGAACAAGGCGT 60.603 55.000 0.00 0.00 0.00 5.68
191 192 1.157585 GGGAAGAAGAACAAGGCGTC 58.842 55.000 0.00 0.00 0.00 5.19
192 193 1.542547 GGGAAGAAGAACAAGGCGTCA 60.543 52.381 0.00 0.00 0.00 4.35
193 194 1.801178 GGAAGAAGAACAAGGCGTCAG 59.199 52.381 0.00 0.00 0.00 3.51
194 195 2.548067 GGAAGAAGAACAAGGCGTCAGA 60.548 50.000 0.00 0.00 0.00 3.27
195 196 2.156343 AGAAGAACAAGGCGTCAGAC 57.844 50.000 0.00 0.00 0.00 3.51
196 197 0.784778 GAAGAACAAGGCGTCAGACG 59.215 55.000 19.10 19.10 45.88 4.18
197 198 0.600255 AAGAACAAGGCGTCAGACGG 60.600 55.000 24.13 10.01 42.82 4.79
204 205 3.444805 GCGTCAGACGGCTCCTCT 61.445 66.667 24.13 0.00 42.82 3.69
205 206 2.113433 GCGTCAGACGGCTCCTCTA 61.113 63.158 24.13 0.00 42.82 2.43
206 207 2.018544 CGTCAGACGGCTCCTCTAG 58.981 63.158 15.64 0.00 38.08 2.43
207 208 1.440938 CGTCAGACGGCTCCTCTAGG 61.441 65.000 15.64 0.00 38.08 3.02
208 209 0.394625 GTCAGACGGCTCCTCTAGGT 60.395 60.000 0.00 0.00 36.34 3.08
209 210 0.394488 TCAGACGGCTCCTCTAGGTG 60.394 60.000 0.00 0.00 36.34 4.00
210 211 1.076632 AGACGGCTCCTCTAGGTGG 60.077 63.158 0.00 0.00 36.34 4.61
211 212 2.760385 ACGGCTCCTCTAGGTGGC 60.760 66.667 13.10 13.10 46.68 5.01
213 214 3.541713 GGCTCCTCTAGGTGGCCG 61.542 72.222 12.31 0.00 45.14 6.13
214 215 2.442272 GCTCCTCTAGGTGGCCGA 60.442 66.667 0.00 0.00 36.34 5.54
215 216 2.058595 GCTCCTCTAGGTGGCCGAA 61.059 63.158 0.00 0.00 36.34 4.30
216 217 2.022240 GCTCCTCTAGGTGGCCGAAG 62.022 65.000 0.00 0.00 36.34 3.79
217 218 0.395862 CTCCTCTAGGTGGCCGAAGA 60.396 60.000 0.00 0.00 36.34 2.87
218 219 0.040646 TCCTCTAGGTGGCCGAAGAA 59.959 55.000 0.00 0.00 36.34 2.52
219 220 0.461961 CCTCTAGGTGGCCGAAGAAG 59.538 60.000 0.00 0.00 0.00 2.85
220 221 1.475403 CTCTAGGTGGCCGAAGAAGA 58.525 55.000 0.00 0.00 0.00 2.87
221 222 1.825474 CTCTAGGTGGCCGAAGAAGAA 59.175 52.381 0.00 0.00 0.00 2.52
222 223 1.825474 TCTAGGTGGCCGAAGAAGAAG 59.175 52.381 0.00 0.00 0.00 2.85
223 224 0.249398 TAGGTGGCCGAAGAAGAAGC 59.751 55.000 0.00 0.00 0.00 3.86
224 225 1.003233 GGTGGCCGAAGAAGAAGCT 60.003 57.895 0.00 0.00 0.00 3.74
225 226 0.606673 GGTGGCCGAAGAAGAAGCTT 60.607 55.000 0.00 0.00 0.00 3.74
226 227 0.519077 GTGGCCGAAGAAGAAGCTTG 59.481 55.000 2.10 0.00 0.00 4.01
227 228 1.237285 TGGCCGAAGAAGAAGCTTGC 61.237 55.000 2.10 0.00 0.00 4.01
228 229 1.237285 GGCCGAAGAAGAAGCTTGCA 61.237 55.000 2.10 0.00 0.00 4.08
229 230 0.167689 GCCGAAGAAGAAGCTTGCAG 59.832 55.000 2.10 0.00 0.00 4.41
230 231 0.801251 CCGAAGAAGAAGCTTGCAGG 59.199 55.000 2.10 0.00 0.00 4.85
231 232 0.167689 CGAAGAAGAAGCTTGCAGGC 59.832 55.000 13.82 13.82 0.00 4.85
232 233 0.167689 GAAGAAGAAGCTTGCAGGCG 59.832 55.000 15.78 0.00 37.29 5.52
233 234 0.536006 AAGAAGAAGCTTGCAGGCGT 60.536 50.000 15.78 12.72 37.29 5.68
234 235 1.208614 GAAGAAGCTTGCAGGCGTG 59.791 57.895 14.96 1.01 37.29 5.34
235 236 1.227943 AAGAAGCTTGCAGGCGTGA 60.228 52.632 14.96 0.00 37.29 4.35
236 237 1.510480 AAGAAGCTTGCAGGCGTGAC 61.510 55.000 14.96 7.63 37.29 3.67
237 238 3.300667 GAAGCTTGCAGGCGTGACG 62.301 63.158 14.96 0.00 37.29 4.35
249 250 4.185413 GTGACGCATGTGACGGAT 57.815 55.556 14.43 0.00 34.00 4.18
250 251 1.709760 GTGACGCATGTGACGGATG 59.290 57.895 14.43 0.00 34.00 3.51
251 252 2.100031 TGACGCATGTGACGGATGC 61.100 57.895 14.43 0.00 42.41 3.91
254 255 4.241999 GCATGTGACGGATGCGGC 62.242 66.667 12.44 9.08 37.10 6.53
255 256 2.512286 CATGTGACGGATGCGGCT 60.512 61.111 15.41 0.00 0.00 5.52
256 257 2.512286 ATGTGACGGATGCGGCTG 60.512 61.111 15.41 0.00 0.00 4.85
271 272 4.069232 CTGCGACCGAAGCTCCCA 62.069 66.667 0.00 0.00 35.28 4.37
272 273 3.589654 CTGCGACCGAAGCTCCCAA 62.590 63.158 0.00 0.00 35.28 4.12
273 274 2.358247 GCGACCGAAGCTCCCAAA 60.358 61.111 0.00 0.00 0.00 3.28
274 275 1.745489 GCGACCGAAGCTCCCAAAT 60.745 57.895 0.00 0.00 0.00 2.32
275 276 0.461339 GCGACCGAAGCTCCCAAATA 60.461 55.000 0.00 0.00 0.00 1.40
276 277 1.810412 GCGACCGAAGCTCCCAAATAT 60.810 52.381 0.00 0.00 0.00 1.28
277 278 2.135933 CGACCGAAGCTCCCAAATATC 58.864 52.381 0.00 0.00 0.00 1.63
278 279 2.483013 CGACCGAAGCTCCCAAATATCA 60.483 50.000 0.00 0.00 0.00 2.15
279 280 2.872858 GACCGAAGCTCCCAAATATCAC 59.127 50.000 0.00 0.00 0.00 3.06
280 281 2.222027 CCGAAGCTCCCAAATATCACC 58.778 52.381 0.00 0.00 0.00 4.02
281 282 2.421388 CCGAAGCTCCCAAATATCACCA 60.421 50.000 0.00 0.00 0.00 4.17
282 283 3.480470 CGAAGCTCCCAAATATCACCAT 58.520 45.455 0.00 0.00 0.00 3.55
283 284 4.504864 CCGAAGCTCCCAAATATCACCATA 60.505 45.833 0.00 0.00 0.00 2.74
284 285 5.248640 CGAAGCTCCCAAATATCACCATAT 58.751 41.667 0.00 0.00 0.00 1.78
285 286 5.707298 CGAAGCTCCCAAATATCACCATATT 59.293 40.000 0.00 0.00 36.85 1.28
286 287 6.348786 CGAAGCTCCCAAATATCACCATATTG 60.349 42.308 0.00 0.00 35.66 1.90
287 288 5.957132 AGCTCCCAAATATCACCATATTGT 58.043 37.500 0.00 0.00 35.66 2.71
288 289 6.006449 AGCTCCCAAATATCACCATATTGTC 58.994 40.000 0.00 0.00 35.66 3.18
289 290 6.006449 GCTCCCAAATATCACCATATTGTCT 58.994 40.000 0.00 0.00 35.66 3.41
290 291 6.491403 GCTCCCAAATATCACCATATTGTCTT 59.509 38.462 0.00 0.00 35.66 3.01
291 292 7.308830 GCTCCCAAATATCACCATATTGTCTTC 60.309 40.741 0.00 0.00 35.66 2.87
292 293 7.581814 TCCCAAATATCACCATATTGTCTTCA 58.418 34.615 0.00 0.00 35.66 3.02
293 294 8.058235 TCCCAAATATCACCATATTGTCTTCAA 58.942 33.333 0.00 0.00 35.66 2.69
294 295 8.694540 CCCAAATATCACCATATTGTCTTCAAA 58.305 33.333 0.00 0.00 35.66 2.69
298 299 9.754382 AATATCACCATATTGTCTTCAAAATGC 57.246 29.630 0.00 0.00 34.41 3.56
299 300 6.587206 TCACCATATTGTCTTCAAAATGCA 57.413 33.333 0.00 0.00 37.11 3.96
300 301 7.172868 TCACCATATTGTCTTCAAAATGCAT 57.827 32.000 0.00 0.00 37.11 3.96
301 302 7.259882 TCACCATATTGTCTTCAAAATGCATC 58.740 34.615 0.00 0.00 37.11 3.91
302 303 7.036829 CACCATATTGTCTTCAAAATGCATCA 58.963 34.615 0.00 0.00 37.11 3.07
303 304 7.709182 CACCATATTGTCTTCAAAATGCATCAT 59.291 33.333 0.00 0.00 37.11 2.45
304 305 8.916062 ACCATATTGTCTTCAAAATGCATCATA 58.084 29.630 0.00 0.00 37.11 2.15
305 306 9.923143 CCATATTGTCTTCAAAATGCATCATAT 57.077 29.630 0.00 0.00 37.11 1.78
307 308 9.923143 ATATTGTCTTCAAAATGCATCATATGG 57.077 29.630 0.00 0.00 37.11 2.74
308 309 5.593968 TGTCTTCAAAATGCATCATATGGC 58.406 37.500 0.00 0.00 0.00 4.40
309 310 4.678287 GTCTTCAAAATGCATCATATGGCG 59.322 41.667 0.00 0.00 0.00 5.69
310 311 3.015934 TCAAAATGCATCATATGGCGC 57.984 42.857 0.00 0.00 0.00 6.53
311 312 1.717113 CAAAATGCATCATATGGCGCG 59.283 47.619 0.00 0.00 0.00 6.86
312 313 0.387622 AAATGCATCATATGGCGCGC 60.388 50.000 25.94 25.94 0.00 6.86
313 314 2.517391 AATGCATCATATGGCGCGCG 62.517 55.000 28.44 28.44 0.00 6.86
314 315 3.716006 GCATCATATGGCGCGCGT 61.716 61.111 32.35 18.83 0.00 6.01
315 316 2.171701 CATCATATGGCGCGCGTG 59.828 61.111 32.35 21.01 0.00 5.34
316 317 3.716006 ATCATATGGCGCGCGTGC 61.716 61.111 35.15 35.15 37.91 5.34
317 318 4.889856 TCATATGGCGCGCGTGCT 62.890 61.111 39.35 25.82 39.65 4.40
318 319 2.763627 ATCATATGGCGCGCGTGCTA 62.764 55.000 39.35 36.01 39.65 3.49
319 320 2.048222 ATATGGCGCGCGTGCTAT 60.048 55.556 38.56 38.56 39.55 2.97
320 321 1.075979 CATATGGCGCGCGTGCTATA 61.076 55.000 39.88 39.88 41.63 1.31
321 322 0.179111 ATATGGCGCGCGTGCTATAT 60.179 50.000 40.36 40.36 42.17 0.86
322 323 0.389296 TATGGCGCGCGTGCTATATT 60.389 50.000 36.58 23.45 37.28 1.28
323 324 1.227999 ATGGCGCGCGTGCTATATTT 61.228 50.000 36.99 18.27 39.65 1.40
324 325 1.278637 GGCGCGCGTGCTATATTTT 59.721 52.632 39.35 0.00 39.65 1.82
325 326 0.991770 GGCGCGCGTGCTATATTTTG 60.992 55.000 39.35 1.34 39.65 2.44
326 327 1.588305 GCGCGCGTGCTATATTTTGC 61.588 55.000 35.43 8.43 39.65 3.68
327 328 0.315788 CGCGCGTGCTATATTTTGCA 60.316 50.000 24.19 0.00 39.65 4.08
328 329 1.388888 GCGCGTGCTATATTTTGCAG 58.611 50.000 15.02 0.00 40.06 4.41
329 330 1.388888 CGCGTGCTATATTTTGCAGC 58.611 50.000 0.00 0.00 40.06 5.25
330 331 1.388888 GCGTGCTATATTTTGCAGCG 58.611 50.000 0.00 2.41 40.06 5.18
331 332 1.921573 GCGTGCTATATTTTGCAGCGG 60.922 52.381 12.57 0.00 40.06 5.52
332 333 1.758783 GTGCTATATTTTGCAGCGGC 58.241 50.000 0.31 0.31 40.06 6.53
333 334 1.334869 GTGCTATATTTTGCAGCGGCT 59.665 47.619 10.92 0.00 40.06 5.52
334 335 1.334556 TGCTATATTTTGCAGCGGCTG 59.665 47.619 25.21 25.21 41.91 4.85
375 376 4.221873 GCAAAAACTCGCGGTTCC 57.778 55.556 6.13 0.00 37.12 3.62
376 377 1.724581 GCAAAAACTCGCGGTTCCG 60.725 57.895 6.13 6.90 37.12 4.30
377 378 1.082366 CAAAAACTCGCGGTTCCGG 60.082 57.895 6.13 0.00 37.12 5.14
378 379 2.900167 AAAAACTCGCGGTTCCGGC 61.900 57.895 6.13 4.75 37.12 6.13
407 408 2.125310 CCGCGCCTGTTGGACATA 60.125 61.111 0.00 0.00 34.57 2.29
408 409 2.461110 CCGCGCCTGTTGGACATAC 61.461 63.158 0.00 0.00 34.57 2.39
409 410 1.447838 CGCGCCTGTTGGACATACT 60.448 57.895 0.00 0.00 34.57 2.12
410 411 1.421410 CGCGCCTGTTGGACATACTC 61.421 60.000 0.00 0.00 34.57 2.59
411 412 0.108138 GCGCCTGTTGGACATACTCT 60.108 55.000 0.00 0.00 34.57 3.24
416 417 4.330074 CGCCTGTTGGACATACTCTTAAAG 59.670 45.833 0.00 0.00 34.57 1.85
427 428 8.044908 GGACATACTCTTAAAGTGGTATCCAAA 58.955 37.037 0.00 0.00 39.11 3.28
430 431 9.449719 CATACTCTTAAAGTGGTATCCAAACTT 57.550 33.333 0.00 0.00 39.11 2.66
433 434 7.878644 ACTCTTAAAGTGGTATCCAAACTTCTC 59.121 37.037 0.00 0.00 36.65 2.87
436 437 4.974645 AGTGGTATCCAAACTTCTCACA 57.025 40.909 0.00 0.00 34.18 3.58
450 451 3.084536 TCTCACATGAGACTCTCAGCT 57.915 47.619 14.12 0.00 45.48 4.24
464 465 1.004560 CAGCTCTCAGCCACGGAAA 60.005 57.895 0.00 0.00 43.77 3.13
465 466 1.018226 CAGCTCTCAGCCACGGAAAG 61.018 60.000 0.00 0.00 43.77 2.62
469 470 2.357034 TCAGCCACGGAAAGACGC 60.357 61.111 0.00 0.00 37.37 5.19
473 474 2.257371 CCACGGAAAGACGCTCGA 59.743 61.111 0.00 0.00 37.37 4.04
714 759 1.279025 ACCAGCCCGGGATATGTTGT 61.279 55.000 29.31 10.53 40.22 3.32
763 1184 1.202302 CGTCCGTCTGACATGCATACT 60.202 52.381 8.73 0.00 44.71 2.12
764 1185 2.464865 GTCCGTCTGACATGCATACTC 58.535 52.381 8.73 0.00 43.85 2.59
769 1212 3.316588 CGTCTGACATGCATACTCCTAGT 59.683 47.826 8.73 0.00 0.00 2.57
771 1214 5.285651 GTCTGACATGCATACTCCTAGTTC 58.714 45.833 0.00 0.00 0.00 3.01
782 1225 6.040391 GCATACTCCTAGTTCAGAAGATGAGT 59.960 42.308 8.71 8.71 39.68 3.41
840 1312 3.853330 CGGATTGACACAGCCGCG 61.853 66.667 0.00 0.00 37.08 6.46
936 1428 4.647615 CGTCCGCCCATCCGCTAG 62.648 72.222 0.00 0.00 0.00 3.42
937 1429 4.971125 GTCCGCCCATCCGCTAGC 62.971 72.222 4.06 4.06 0.00 3.42
939 1431 4.671569 CCGCCCATCCGCTAGCTC 62.672 72.222 13.93 0.00 0.00 4.09
940 1432 4.671569 CGCCCATCCGCTAGCTCC 62.672 72.222 13.93 0.00 0.00 4.70
941 1433 4.321966 GCCCATCCGCTAGCTCCC 62.322 72.222 13.93 0.00 0.00 4.30
942 1434 2.525381 CCCATCCGCTAGCTCCCT 60.525 66.667 13.93 0.00 0.00 4.20
943 1435 2.578714 CCCATCCGCTAGCTCCCTC 61.579 68.421 13.93 0.00 0.00 4.30
944 1436 2.578714 CCATCCGCTAGCTCCCTCC 61.579 68.421 13.93 0.00 0.00 4.30
945 1437 2.203714 ATCCGCTAGCTCCCTCCC 60.204 66.667 13.93 0.00 0.00 4.30
946 1438 3.088090 ATCCGCTAGCTCCCTCCCA 62.088 63.158 13.93 0.00 0.00 4.37
947 1439 3.541713 CCGCTAGCTCCCTCCCAC 61.542 72.222 13.93 0.00 0.00 4.61
948 1440 3.541713 CGCTAGCTCCCTCCCACC 61.542 72.222 13.93 0.00 0.00 4.61
949 1441 2.041405 GCTAGCTCCCTCCCACCT 60.041 66.667 7.70 0.00 0.00 4.00
1076 1592 3.799755 CGCACCGCCCTTGTTAGC 61.800 66.667 0.00 0.00 0.00 3.09
1165 1688 2.203480 ACCCACAACAATGCCGCT 60.203 55.556 0.00 0.00 0.00 5.52
1166 1689 2.259204 CCCACAACAATGCCGCTG 59.741 61.111 0.00 0.00 0.00 5.18
1167 1690 2.431260 CCACAACAATGCCGCTGC 60.431 61.111 0.00 0.00 38.26 5.25
1168 1691 2.431260 CACAACAATGCCGCTGCC 60.431 61.111 0.00 0.00 36.33 4.85
1169 1692 4.041917 ACAACAATGCCGCTGCCG 62.042 61.111 0.00 0.00 36.33 5.69
1214 1740 4.694233 CGCAGCAGCACAGGAGGT 62.694 66.667 0.82 0.00 42.27 3.85
1240 1766 1.296715 GAAGGTGGCCATCGTCACT 59.703 57.895 24.97 7.08 34.57 3.41
1900 2450 2.104530 GTTAGCGCGGAGGAGGTC 59.895 66.667 8.83 0.00 0.00 3.85
1963 2513 3.893763 CCGACGCTGAGAGCCGAT 61.894 66.667 0.00 0.00 38.18 4.18
2150 2714 2.729360 CGAGTGTCGCAATCAAGTACAA 59.271 45.455 0.00 0.00 31.14 2.41
2246 3961 7.865706 AGGAGTAATTAGCTGGTGTTTATTG 57.134 36.000 0.00 0.00 0.00 1.90
2248 3963 6.602009 GGAGTAATTAGCTGGTGTTTATTGGT 59.398 38.462 0.00 0.00 0.00 3.67
2249 3964 7.391148 AGTAATTAGCTGGTGTTTATTGGTG 57.609 36.000 0.00 0.00 0.00 4.17
2251 3966 5.643379 ATTAGCTGGTGTTTATTGGTGTG 57.357 39.130 0.00 0.00 0.00 3.82
2252 3967 2.944129 AGCTGGTGTTTATTGGTGTGT 58.056 42.857 0.00 0.00 0.00 3.72
2255 3970 3.801594 GCTGGTGTTTATTGGTGTGTTTG 59.198 43.478 0.00 0.00 0.00 2.93
2256 3971 4.440802 GCTGGTGTTTATTGGTGTGTTTGA 60.441 41.667 0.00 0.00 0.00 2.69
2257 3972 5.000012 TGGTGTTTATTGGTGTGTTTGAC 58.000 39.130 0.00 0.00 0.00 3.18
2294 4019 4.641989 GTGATGAACTATGGATTTGCCTGT 59.358 41.667 0.00 0.00 37.63 4.00
2316 4042 8.565416 CCTGTTTTTCTTCTTCGTTACCTAAAT 58.435 33.333 0.00 0.00 0.00 1.40
2327 4053 4.084433 TCGTTACCTAAATTGTTGTCGTGC 60.084 41.667 0.00 0.00 0.00 5.34
2335 4061 2.047655 GTTGTCGTGCCCGGATCA 60.048 61.111 0.73 0.00 33.95 2.92
2367 4093 7.710896 ACTGTTTAGTTCAGTAGTAACGAAGT 58.289 34.615 0.00 0.00 43.55 3.01
2368 4094 7.646922 ACTGTTTAGTTCAGTAGTAACGAAGTG 59.353 37.037 0.00 0.00 41.83 3.16
2369 4095 7.706159 TGTTTAGTTCAGTAGTAACGAAGTGA 58.294 34.615 0.00 0.00 45.00 3.41
2370 4096 7.645340 TGTTTAGTTCAGTAGTAACGAAGTGAC 59.355 37.037 0.00 0.00 45.00 3.67
2376 4102 3.484524 GTAACGAAGTGACGCTGGA 57.515 52.632 0.00 0.00 45.00 3.86
2377 4103 1.337821 GTAACGAAGTGACGCTGGAG 58.662 55.000 0.00 0.00 45.00 3.86
2378 4104 0.956633 TAACGAAGTGACGCTGGAGT 59.043 50.000 0.00 0.00 45.00 3.85
2379 4105 0.956633 AACGAAGTGACGCTGGAGTA 59.043 50.000 0.00 0.00 45.00 2.59
2380 4106 0.522180 ACGAAGTGACGCTGGAGTAG 59.478 55.000 0.00 0.00 42.51 2.57
2381 4107 0.179161 CGAAGTGACGCTGGAGTAGG 60.179 60.000 0.00 0.00 0.00 3.18
2382 4108 1.174783 GAAGTGACGCTGGAGTAGGA 58.825 55.000 0.00 0.00 0.00 2.94
2383 4109 1.544691 GAAGTGACGCTGGAGTAGGAA 59.455 52.381 0.00 0.00 0.00 3.36
2384 4110 1.629043 AGTGACGCTGGAGTAGGAAA 58.371 50.000 0.00 0.00 0.00 3.13
2385 4111 1.968493 AGTGACGCTGGAGTAGGAAAA 59.032 47.619 0.00 0.00 0.00 2.29
2386 4112 2.567615 AGTGACGCTGGAGTAGGAAAAT 59.432 45.455 0.00 0.00 0.00 1.82
2387 4113 3.767673 AGTGACGCTGGAGTAGGAAAATA 59.232 43.478 0.00 0.00 0.00 1.40
2388 4114 3.864003 GTGACGCTGGAGTAGGAAAATAC 59.136 47.826 0.00 0.00 0.00 1.89
2389 4115 3.512329 TGACGCTGGAGTAGGAAAATACA 59.488 43.478 0.00 0.00 0.00 2.29
2390 4116 3.858247 ACGCTGGAGTAGGAAAATACAC 58.142 45.455 0.00 0.00 0.00 2.90
2391 4117 3.259876 ACGCTGGAGTAGGAAAATACACA 59.740 43.478 0.00 0.00 0.00 3.72
2392 4118 3.865745 CGCTGGAGTAGGAAAATACACAG 59.134 47.826 0.00 0.00 36.65 3.66
2393 4119 4.192317 GCTGGAGTAGGAAAATACACAGG 58.808 47.826 0.00 0.00 35.34 4.00
2394 4120 4.081087 GCTGGAGTAGGAAAATACACAGGA 60.081 45.833 0.00 0.00 35.34 3.86
2395 4121 5.665459 CTGGAGTAGGAAAATACACAGGAG 58.335 45.833 0.00 0.00 33.15 3.69
2396 4122 4.081087 TGGAGTAGGAAAATACACAGGAGC 60.081 45.833 0.00 0.00 0.00 4.70
2397 4123 4.162509 GGAGTAGGAAAATACACAGGAGCT 59.837 45.833 0.00 0.00 0.00 4.09
2398 4124 5.346181 AGTAGGAAAATACACAGGAGCTC 57.654 43.478 4.71 4.71 0.00 4.09
2399 4125 3.636153 AGGAAAATACACAGGAGCTCC 57.364 47.619 26.22 26.22 0.00 4.70
2408 4134 4.496173 AGGAGCTCCTGGATGCTT 57.504 55.556 34.74 7.88 46.55 3.91
2409 4135 2.219989 AGGAGCTCCTGGATGCTTC 58.780 57.895 34.74 16.28 46.55 3.86
2410 4136 0.619832 AGGAGCTCCTGGATGCTTCA 60.620 55.000 34.74 0.00 46.55 3.02
2411 4137 0.463474 GGAGCTCCTGGATGCTTCAC 60.463 60.000 26.25 10.38 39.91 3.18
2412 4138 0.463474 GAGCTCCTGGATGCTTCACC 60.463 60.000 17.71 5.79 39.91 4.02
2413 4139 1.452833 GCTCCTGGATGCTTCACCC 60.453 63.158 0.00 0.00 0.00 4.61
2414 4140 1.225704 CTCCTGGATGCTTCACCCC 59.774 63.158 0.00 0.00 0.00 4.95
2415 4141 2.276309 CTCCTGGATGCTTCACCCCC 62.276 65.000 0.00 0.00 0.00 5.40
2416 4142 2.311854 CCTGGATGCTTCACCCCCT 61.312 63.158 1.64 0.00 0.00 4.79
2417 4143 0.988145 CCTGGATGCTTCACCCCCTA 60.988 60.000 1.64 0.00 0.00 3.53
2418 4144 1.143813 CTGGATGCTTCACCCCCTAT 58.856 55.000 1.64 0.00 0.00 2.57
2419 4145 2.338809 CTGGATGCTTCACCCCCTATA 58.661 52.381 1.64 0.00 0.00 1.31
2420 4146 2.039084 CTGGATGCTTCACCCCCTATAC 59.961 54.545 1.64 0.00 0.00 1.47
2421 4147 1.002087 GGATGCTTCACCCCCTATACG 59.998 57.143 1.64 0.00 0.00 3.06
2422 4148 1.968493 GATGCTTCACCCCCTATACGA 59.032 52.381 0.00 0.00 0.00 3.43
2423 4149 1.868713 TGCTTCACCCCCTATACGAA 58.131 50.000 0.00 0.00 0.00 3.85
2424 4150 2.404559 TGCTTCACCCCCTATACGAAT 58.595 47.619 0.00 0.00 0.00 3.34
2425 4151 3.578978 TGCTTCACCCCCTATACGAATA 58.421 45.455 0.00 0.00 0.00 1.75
2426 4152 4.164981 TGCTTCACCCCCTATACGAATAT 58.835 43.478 0.00 0.00 0.00 1.28
2427 4153 4.595781 TGCTTCACCCCCTATACGAATATT 59.404 41.667 0.00 0.00 0.00 1.28
2428 4154 5.781306 TGCTTCACCCCCTATACGAATATTA 59.219 40.000 0.00 0.00 0.00 0.98
2429 4155 6.270463 TGCTTCACCCCCTATACGAATATTAA 59.730 38.462 0.00 0.00 0.00 1.40
2430 4156 6.817140 GCTTCACCCCCTATACGAATATTAAG 59.183 42.308 0.00 0.00 0.00 1.85
2431 4157 6.290294 TCACCCCCTATACGAATATTAAGC 57.710 41.667 0.00 0.00 0.00 3.09
2432 4158 5.105635 TCACCCCCTATACGAATATTAAGCG 60.106 44.000 0.00 0.00 0.00 4.68
2433 4159 4.774200 ACCCCCTATACGAATATTAAGCGT 59.226 41.667 6.04 6.04 41.58 5.07
2434 4160 5.951747 ACCCCCTATACGAATATTAAGCGTA 59.048 40.000 9.49 9.49 43.50 4.42
2435 4161 6.437162 ACCCCCTATACGAATATTAAGCGTAA 59.563 38.462 10.72 0.00 42.75 3.18
2436 4162 7.039082 ACCCCCTATACGAATATTAAGCGTAAA 60.039 37.037 10.72 0.00 42.75 2.01
2437 4163 7.818930 CCCCCTATACGAATATTAAGCGTAAAA 59.181 37.037 10.72 3.89 42.75 1.52
2438 4164 9.206870 CCCCTATACGAATATTAAGCGTAAAAA 57.793 33.333 10.72 2.06 42.75 1.94
2487 4213 7.675161 AAAATTTAGGGATATCAAACCAGGG 57.325 36.000 4.83 0.00 0.00 4.45
2488 4214 6.355588 AATTTAGGGATATCAAACCAGGGT 57.644 37.500 4.83 0.00 0.00 4.34
2489 4215 5.806955 TTTAGGGATATCAAACCAGGGTT 57.193 39.130 4.83 0.00 40.45 4.11
2490 4216 3.953542 AGGGATATCAAACCAGGGTTC 57.046 47.619 3.82 0.00 37.35 3.62
2491 4217 3.474920 AGGGATATCAAACCAGGGTTCT 58.525 45.455 3.82 0.00 37.35 3.01
2492 4218 3.459969 AGGGATATCAAACCAGGGTTCTC 59.540 47.826 3.82 0.00 37.35 2.87
2493 4219 3.202151 GGGATATCAAACCAGGGTTCTCA 59.798 47.826 3.82 0.00 37.35 3.27
2494 4220 4.325030 GGGATATCAAACCAGGGTTCTCAA 60.325 45.833 3.82 0.00 37.35 3.02
2495 4221 5.449553 GGATATCAAACCAGGGTTCTCAAT 58.550 41.667 3.82 0.00 37.35 2.57
2496 4222 5.532779 GGATATCAAACCAGGGTTCTCAATC 59.467 44.000 3.82 6.19 37.35 2.67
2497 4223 4.664688 ATCAAACCAGGGTTCTCAATCT 57.335 40.909 3.82 0.00 37.35 2.40
2498 4224 5.779241 ATCAAACCAGGGTTCTCAATCTA 57.221 39.130 3.82 0.00 37.35 1.98
2499 4225 4.906618 TCAAACCAGGGTTCTCAATCTAC 58.093 43.478 3.82 0.00 37.35 2.59
2500 4226 4.597507 TCAAACCAGGGTTCTCAATCTACT 59.402 41.667 3.82 0.00 37.35 2.57
2501 4227 4.828072 AACCAGGGTTCTCAATCTACTC 57.172 45.455 0.00 0.00 32.09 2.59
2502 4228 3.791320 ACCAGGGTTCTCAATCTACTCA 58.209 45.455 0.00 0.00 0.00 3.41
2503 4229 3.515901 ACCAGGGTTCTCAATCTACTCAC 59.484 47.826 0.00 0.00 0.00 3.51
2504 4230 3.429547 CCAGGGTTCTCAATCTACTCACG 60.430 52.174 0.00 0.00 0.00 4.35
2505 4231 3.193691 CAGGGTTCTCAATCTACTCACGT 59.806 47.826 0.00 0.00 0.00 4.49
2506 4232 3.193691 AGGGTTCTCAATCTACTCACGTG 59.806 47.826 9.94 9.94 0.00 4.49
2507 4233 3.056749 GGGTTCTCAATCTACTCACGTGT 60.057 47.826 16.51 0.00 0.00 4.49
2508 4234 3.921021 GGTTCTCAATCTACTCACGTGTG 59.079 47.826 16.51 16.06 0.00 3.82
2509 4235 4.321008 GGTTCTCAATCTACTCACGTGTGA 60.321 45.833 23.32 12.81 38.06 3.58
2510 4236 5.220381 GTTCTCAATCTACTCACGTGTGAA 58.780 41.667 23.32 9.15 39.39 3.18
2511 4237 5.447624 TCTCAATCTACTCACGTGTGAAA 57.552 39.130 23.32 10.25 39.39 2.69
2512 4238 6.025749 TCTCAATCTACTCACGTGTGAAAT 57.974 37.500 23.32 10.54 39.39 2.17
2513 4239 6.455647 TCTCAATCTACTCACGTGTGAAATT 58.544 36.000 23.32 15.04 39.39 1.82
2514 4240 6.929049 TCTCAATCTACTCACGTGTGAAATTT 59.071 34.615 23.32 9.10 39.39 1.82
2515 4241 7.116376 TCTCAATCTACTCACGTGTGAAATTTC 59.884 37.037 23.32 11.41 39.39 2.17
2516 4242 6.704050 TCAATCTACTCACGTGTGAAATTTCA 59.296 34.615 23.32 16.91 39.39 2.69
2517 4243 7.387673 TCAATCTACTCACGTGTGAAATTTCAT 59.612 33.333 23.05 5.20 39.73 2.57
2518 4244 6.466308 TCTACTCACGTGTGAAATTTCATG 57.534 37.500 23.05 16.74 39.73 3.07
2519 4245 6.220201 TCTACTCACGTGTGAAATTTCATGA 58.780 36.000 23.05 19.63 39.73 3.07
2520 4246 5.749596 ACTCACGTGTGAAATTTCATGAA 57.250 34.783 23.05 3.38 39.73 2.57
2521 4247 6.130298 ACTCACGTGTGAAATTTCATGAAA 57.870 33.333 23.05 22.52 39.73 2.69
2522 4248 6.559810 ACTCACGTGTGAAATTTCATGAAAA 58.440 32.000 23.91 5.59 39.73 2.29
2523 4249 7.032580 ACTCACGTGTGAAATTTCATGAAAAA 58.967 30.769 23.91 3.45 39.73 1.94
2546 4272 6.655078 AATACCAAGAAATGTATCCATGGC 57.345 37.500 6.96 0.00 32.68 4.40
2547 4273 2.951642 ACCAAGAAATGTATCCATGGCG 59.048 45.455 6.96 0.00 32.68 5.69
2548 4274 3.213506 CCAAGAAATGTATCCATGGCGA 58.786 45.455 6.96 0.00 0.00 5.54
2549 4275 3.631686 CCAAGAAATGTATCCATGGCGAA 59.368 43.478 6.96 0.00 0.00 4.70
2550 4276 4.261322 CCAAGAAATGTATCCATGGCGAAG 60.261 45.833 6.96 0.00 0.00 3.79
2551 4277 3.480470 AGAAATGTATCCATGGCGAAGG 58.520 45.455 6.96 0.00 0.00 3.46
2552 4278 3.136443 AGAAATGTATCCATGGCGAAGGA 59.864 43.478 6.96 0.00 38.50 3.36
2553 4279 3.576078 AATGTATCCATGGCGAAGGAA 57.424 42.857 6.96 0.00 37.48 3.36
2554 4280 3.576078 ATGTATCCATGGCGAAGGAAA 57.424 42.857 6.96 0.00 37.48 3.13
2555 4281 3.576078 TGTATCCATGGCGAAGGAAAT 57.424 42.857 6.96 0.00 37.48 2.17
2556 4282 4.698201 TGTATCCATGGCGAAGGAAATA 57.302 40.909 6.96 0.00 37.48 1.40
2557 4283 5.042463 TGTATCCATGGCGAAGGAAATAA 57.958 39.130 6.96 0.00 37.48 1.40
2558 4284 5.630121 TGTATCCATGGCGAAGGAAATAAT 58.370 37.500 6.96 0.00 37.48 1.28
2559 4285 5.473162 TGTATCCATGGCGAAGGAAATAATG 59.527 40.000 6.96 0.00 37.48 1.90
2560 4286 3.897239 TCCATGGCGAAGGAAATAATGT 58.103 40.909 6.96 0.00 0.00 2.71
2561 4287 3.882888 TCCATGGCGAAGGAAATAATGTC 59.117 43.478 6.96 0.00 0.00 3.06
2562 4288 3.004734 CCATGGCGAAGGAAATAATGTCC 59.995 47.826 0.00 0.00 35.17 4.02
2563 4289 2.285083 TGGCGAAGGAAATAATGTCCG 58.715 47.619 0.00 0.00 40.36 4.79
2564 4290 2.285977 GGCGAAGGAAATAATGTCCGT 58.714 47.619 0.00 0.00 40.36 4.69
2565 4291 3.118702 TGGCGAAGGAAATAATGTCCGTA 60.119 43.478 0.00 0.00 40.36 4.02
2566 4292 3.246936 GGCGAAGGAAATAATGTCCGTAC 59.753 47.826 0.00 0.00 40.36 3.67
2567 4293 3.866910 GCGAAGGAAATAATGTCCGTACA 59.133 43.478 0.00 0.00 40.36 2.90
2568 4294 4.330620 GCGAAGGAAATAATGTCCGTACAA 59.669 41.667 0.00 0.00 39.58 2.41
2569 4295 5.163834 GCGAAGGAAATAATGTCCGTACAAA 60.164 40.000 0.00 0.00 39.58 2.83
2570 4296 6.621164 GCGAAGGAAATAATGTCCGTACAAAA 60.621 38.462 0.00 0.00 39.58 2.44
2571 4297 7.299586 CGAAGGAAATAATGTCCGTACAAAAA 58.700 34.615 0.00 0.00 39.58 1.94
2572 4298 7.966204 CGAAGGAAATAATGTCCGTACAAAAAT 59.034 33.333 0.00 0.00 39.58 1.82
2573 4299 9.285770 GAAGGAAATAATGTCCGTACAAAAATC 57.714 33.333 0.00 0.00 39.58 2.17
2574 4300 7.768240 AGGAAATAATGTCCGTACAAAAATCC 58.232 34.615 0.00 0.00 39.58 3.01
2575 4301 7.394923 AGGAAATAATGTCCGTACAAAAATCCA 59.605 33.333 0.00 0.00 39.58 3.41
2576 4302 8.194769 GGAAATAATGTCCGTACAAAAATCCAT 58.805 33.333 0.00 0.00 39.58 3.41
2577 4303 9.233232 GAAATAATGTCCGTACAAAAATCCATC 57.767 33.333 0.00 0.00 39.58 3.51
2578 4304 5.576447 AATGTCCGTACAAAAATCCATCC 57.424 39.130 0.00 0.00 39.58 3.51
2579 4305 4.022413 TGTCCGTACAAAAATCCATCCA 57.978 40.909 0.00 0.00 30.91 3.41
2580 4306 4.399219 TGTCCGTACAAAAATCCATCCAA 58.601 39.130 0.00 0.00 30.91 3.53
2581 4307 4.827835 TGTCCGTACAAAAATCCATCCAAA 59.172 37.500 0.00 0.00 30.91 3.28
2582 4308 5.158494 GTCCGTACAAAAATCCATCCAAAC 58.842 41.667 0.00 0.00 0.00 2.93
2583 4309 4.827835 TCCGTACAAAAATCCATCCAAACA 59.172 37.500 0.00 0.00 0.00 2.83
2584 4310 5.048364 TCCGTACAAAAATCCATCCAAACAG 60.048 40.000 0.00 0.00 0.00 3.16
2585 4311 5.048364 CCGTACAAAAATCCATCCAAACAGA 60.048 40.000 0.00 0.00 0.00 3.41
2586 4312 6.350110 CCGTACAAAAATCCATCCAAACAGAT 60.350 38.462 0.00 0.00 0.00 2.90
2587 4313 7.090173 CGTACAAAAATCCATCCAAACAGATT 58.910 34.615 0.00 0.00 0.00 2.40
2588 4314 7.598493 CGTACAAAAATCCATCCAAACAGATTT 59.402 33.333 0.00 0.00 39.89 2.17
2589 4315 9.271828 GTACAAAAATCCATCCAAACAGATTTT 57.728 29.630 4.23 4.23 45.90 1.82
2631 4357 8.756376 TTTTTGTCTCTTTTGTTACGAATACG 57.244 30.769 0.00 0.00 45.75 3.06
2807 4537 2.391879 GGTCGACTGGATTATGCGTAC 58.608 52.381 16.46 0.00 0.00 3.67
3040 4820 0.738762 CGGTCGAGTGACTCCGAGTA 60.739 60.000 7.07 0.00 44.83 2.59
3065 4845 2.715046 GAGTGGAATGCTTCATGGTCA 58.285 47.619 0.00 0.00 0.00 4.02
3107 4887 2.159379 CGAATGCTTCTGGTTTTAGGGC 60.159 50.000 0.00 0.00 0.00 5.19
3280 5063 2.224281 GGATTGACGGACCAGCATGATA 60.224 50.000 0.00 0.00 39.69 2.15
3326 5109 3.039252 TGGTCCATTCCTGGTTTTGTT 57.961 42.857 0.00 0.00 43.61 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.325393 GATACCGGTGCTTGGGGGAG 62.325 65.000 19.93 0.00 0.00 4.30
21 22 2.285818 ATACCGGTGCTTGGGGGA 60.286 61.111 19.93 0.00 0.00 4.81
22 23 2.192175 GATACCGGTGCTTGGGGG 59.808 66.667 19.93 0.00 0.00 5.40
23 24 2.203015 CGATACCGGTGCTTGGGG 60.203 66.667 19.93 0.00 0.00 4.96
24 25 2.895372 GCGATACCGGTGCTTGGG 60.895 66.667 19.93 1.24 36.06 4.12
25 26 2.125310 TGCGATACCGGTGCTTGG 60.125 61.111 19.93 4.46 36.06 3.61
26 27 2.798501 CGTGCGATACCGGTGCTTG 61.799 63.158 19.93 9.64 36.06 4.01
27 28 2.508439 CGTGCGATACCGGTGCTT 60.508 61.111 19.93 0.91 36.06 3.91
35 36 2.627201 GAAAAGGCCGCGTGCGATAC 62.627 60.000 16.91 5.30 42.61 2.24
36 37 2.435234 AAAAGGCCGCGTGCGATA 60.435 55.556 16.91 0.00 42.61 2.92
37 38 3.799755 GAAAAGGCCGCGTGCGAT 61.800 61.111 16.91 0.00 42.61 4.58
39 40 4.101790 ATGAAAAGGCCGCGTGCG 62.102 61.111 4.92 7.38 42.61 5.34
40 41 2.504681 CATGAAAAGGCCGCGTGC 60.505 61.111 4.92 8.33 40.16 5.34
41 42 2.504681 GCATGAAAAGGCCGCGTG 60.505 61.111 4.92 1.30 0.00 5.34
42 43 3.747976 GGCATGAAAAGGCCGCGT 61.748 61.111 4.92 0.00 40.93 6.01
46 47 3.381136 TGGCGGCATGAAAAGGCC 61.381 61.111 7.97 0.00 46.80 5.19
47 48 2.125952 GTGGCGGCATGAAAAGGC 60.126 61.111 17.19 0.00 0.00 4.35
48 49 2.179018 CGTGGCGGCATGAAAAGG 59.821 61.111 25.82 0.00 0.00 3.11
49 50 2.179018 CCGTGGCGGCATGAAAAG 59.821 61.111 30.78 11.48 41.17 2.27
120 121 3.157949 GGGAGCTTCGAGAGGGGG 61.158 72.222 0.00 0.00 0.00 5.40
121 122 1.553690 TTTGGGAGCTTCGAGAGGGG 61.554 60.000 0.00 0.00 0.00 4.79
122 123 0.543749 ATTTGGGAGCTTCGAGAGGG 59.456 55.000 0.00 0.00 0.00 4.30
123 124 1.661341 CATTTGGGAGCTTCGAGAGG 58.339 55.000 0.00 0.00 0.00 3.69
124 125 1.012841 GCATTTGGGAGCTTCGAGAG 58.987 55.000 0.00 0.00 0.00 3.20
125 126 0.740868 CGCATTTGGGAGCTTCGAGA 60.741 55.000 0.00 0.00 0.00 4.04
126 127 0.740868 TCGCATTTGGGAGCTTCGAG 60.741 55.000 0.00 0.00 32.93 4.04
127 128 1.019278 GTCGCATTTGGGAGCTTCGA 61.019 55.000 0.00 0.00 37.69 3.71
128 129 1.425428 GTCGCATTTGGGAGCTTCG 59.575 57.895 0.00 0.00 37.69 3.79
129 130 1.425428 CGTCGCATTTGGGAGCTTC 59.575 57.895 0.00 0.00 37.69 3.86
130 131 2.690778 GCGTCGCATTTGGGAGCTT 61.691 57.895 13.44 0.00 37.69 3.74
131 132 3.127533 GCGTCGCATTTGGGAGCT 61.128 61.111 13.44 0.00 37.69 4.09
132 133 4.520846 CGCGTCGCATTTGGGAGC 62.521 66.667 18.75 3.90 37.69 4.70
133 134 3.864686 CCGCGTCGCATTTGGGAG 61.865 66.667 18.75 0.00 37.69 4.30
153 154 3.056328 GACACCTTGCCCGCCTTC 61.056 66.667 0.00 0.00 0.00 3.46
154 155 4.660938 GGACACCTTGCCCGCCTT 62.661 66.667 0.00 0.00 0.00 4.35
159 160 3.920093 CTTCCCGGACACCTTGCCC 62.920 68.421 0.73 0.00 0.00 5.36
160 161 2.359975 CTTCCCGGACACCTTGCC 60.360 66.667 0.73 0.00 0.00 4.52
161 162 0.955919 CTTCTTCCCGGACACCTTGC 60.956 60.000 0.73 0.00 0.00 4.01
162 163 0.685097 TCTTCTTCCCGGACACCTTG 59.315 55.000 0.73 0.00 0.00 3.61
163 164 1.071857 GTTCTTCTTCCCGGACACCTT 59.928 52.381 0.73 0.00 0.00 3.50
164 165 0.685660 GTTCTTCTTCCCGGACACCT 59.314 55.000 0.73 0.00 0.00 4.00
165 166 0.395312 TGTTCTTCTTCCCGGACACC 59.605 55.000 0.73 0.00 0.00 4.16
166 167 2.143925 CTTGTTCTTCTTCCCGGACAC 58.856 52.381 0.73 0.00 0.00 3.67
167 168 1.071699 CCTTGTTCTTCTTCCCGGACA 59.928 52.381 0.73 0.00 0.00 4.02
168 169 1.809684 CCTTGTTCTTCTTCCCGGAC 58.190 55.000 0.73 0.00 0.00 4.79
169 170 0.036306 GCCTTGTTCTTCTTCCCGGA 59.964 55.000 0.73 0.00 0.00 5.14
170 171 1.298859 CGCCTTGTTCTTCTTCCCGG 61.299 60.000 0.00 0.00 0.00 5.73
171 172 0.602905 ACGCCTTGTTCTTCTTCCCG 60.603 55.000 0.00 0.00 0.00 5.14
172 173 1.157585 GACGCCTTGTTCTTCTTCCC 58.842 55.000 0.00 0.00 0.00 3.97
173 174 1.801178 CTGACGCCTTGTTCTTCTTCC 59.199 52.381 0.00 0.00 0.00 3.46
174 175 2.476997 GTCTGACGCCTTGTTCTTCTTC 59.523 50.000 0.00 0.00 0.00 2.87
175 176 2.484889 GTCTGACGCCTTGTTCTTCTT 58.515 47.619 0.00 0.00 0.00 2.52
176 177 1.603172 CGTCTGACGCCTTGTTCTTCT 60.603 52.381 17.94 0.00 33.65 2.85
177 178 0.784778 CGTCTGACGCCTTGTTCTTC 59.215 55.000 17.94 0.00 33.65 2.87
178 179 0.600255 CCGTCTGACGCCTTGTTCTT 60.600 55.000 23.87 0.00 40.91 2.52
179 180 1.006102 CCGTCTGACGCCTTGTTCT 60.006 57.895 23.87 0.00 40.91 3.01
180 181 2.668280 GCCGTCTGACGCCTTGTTC 61.668 63.158 23.87 3.54 40.91 3.18
181 182 2.665185 GCCGTCTGACGCCTTGTT 60.665 61.111 23.87 0.00 40.91 2.83
182 183 3.575351 GAGCCGTCTGACGCCTTGT 62.575 63.158 23.87 6.23 40.91 3.16
183 184 2.811317 GAGCCGTCTGACGCCTTG 60.811 66.667 23.87 11.74 40.91 3.61
184 185 4.070552 GGAGCCGTCTGACGCCTT 62.071 66.667 23.87 11.32 40.91 4.35
186 187 4.500116 GAGGAGCCGTCTGACGCC 62.500 72.222 23.87 18.89 40.91 5.68
187 188 2.054140 CTAGAGGAGCCGTCTGACGC 62.054 65.000 23.87 18.30 40.91 5.19
188 189 1.440938 CCTAGAGGAGCCGTCTGACG 61.441 65.000 22.49 22.49 38.31 4.35
189 190 0.394625 ACCTAGAGGAGCCGTCTGAC 60.395 60.000 1.60 0.00 38.94 3.51
190 191 0.394488 CACCTAGAGGAGCCGTCTGA 60.394 60.000 1.60 0.00 38.94 3.27
191 192 1.388065 CCACCTAGAGGAGCCGTCTG 61.388 65.000 1.60 0.00 38.94 3.51
192 193 1.076632 CCACCTAGAGGAGCCGTCT 60.077 63.158 1.60 3.49 38.94 4.18
193 194 2.787567 GCCACCTAGAGGAGCCGTC 61.788 68.421 1.60 0.00 38.94 4.79
194 195 2.760385 GCCACCTAGAGGAGCCGT 60.760 66.667 1.60 0.00 38.94 5.68
195 196 3.541713 GGCCACCTAGAGGAGCCG 61.542 72.222 15.47 0.00 43.97 5.52
196 197 3.541713 CGGCCACCTAGAGGAGCC 61.542 72.222 18.76 18.76 46.98 4.70
197 198 2.022240 CTTCGGCCACCTAGAGGAGC 62.022 65.000 2.24 4.76 38.94 4.70
198 199 0.395862 TCTTCGGCCACCTAGAGGAG 60.396 60.000 2.24 0.00 38.94 3.69
199 200 0.040646 TTCTTCGGCCACCTAGAGGA 59.959 55.000 2.24 0.00 38.94 3.71
200 201 0.461961 CTTCTTCGGCCACCTAGAGG 59.538 60.000 2.24 0.00 42.17 3.69
201 202 1.475403 TCTTCTTCGGCCACCTAGAG 58.525 55.000 2.24 0.00 0.00 2.43
202 203 1.825474 CTTCTTCTTCGGCCACCTAGA 59.175 52.381 2.24 0.00 0.00 2.43
203 204 1.740718 GCTTCTTCTTCGGCCACCTAG 60.741 57.143 2.24 0.00 0.00 3.02
204 205 0.249398 GCTTCTTCTTCGGCCACCTA 59.751 55.000 2.24 0.00 0.00 3.08
205 206 1.003233 GCTTCTTCTTCGGCCACCT 60.003 57.895 2.24 0.00 0.00 4.00
206 207 0.606673 AAGCTTCTTCTTCGGCCACC 60.607 55.000 2.24 0.00 0.00 4.61
207 208 0.519077 CAAGCTTCTTCTTCGGCCAC 59.481 55.000 2.24 0.00 0.00 5.01
208 209 1.237285 GCAAGCTTCTTCTTCGGCCA 61.237 55.000 2.24 0.00 0.00 5.36
209 210 1.237285 TGCAAGCTTCTTCTTCGGCC 61.237 55.000 0.00 0.00 0.00 6.13
210 211 0.167689 CTGCAAGCTTCTTCTTCGGC 59.832 55.000 0.00 0.00 0.00 5.54
211 212 0.801251 CCTGCAAGCTTCTTCTTCGG 59.199 55.000 0.00 0.00 0.00 4.30
212 213 0.167689 GCCTGCAAGCTTCTTCTTCG 59.832 55.000 0.00 0.00 0.00 3.79
213 214 0.167689 CGCCTGCAAGCTTCTTCTTC 59.832 55.000 5.63 0.00 0.00 2.87
214 215 0.536006 ACGCCTGCAAGCTTCTTCTT 60.536 50.000 5.63 0.00 0.00 2.52
215 216 1.072159 ACGCCTGCAAGCTTCTTCT 59.928 52.632 5.63 0.00 0.00 2.85
216 217 1.208614 CACGCCTGCAAGCTTCTTC 59.791 57.895 5.63 0.00 0.00 2.87
217 218 1.227943 TCACGCCTGCAAGCTTCTT 60.228 52.632 5.63 0.00 0.00 2.52
218 219 1.963338 GTCACGCCTGCAAGCTTCT 60.963 57.895 5.63 0.00 0.00 2.85
219 220 2.558313 GTCACGCCTGCAAGCTTC 59.442 61.111 5.63 0.00 0.00 3.86
220 221 3.349006 CGTCACGCCTGCAAGCTT 61.349 61.111 5.63 0.00 0.00 3.74
231 232 1.805539 ATCCGTCACATGCGTCACG 60.806 57.895 0.00 0.00 0.00 4.35
232 233 1.709760 CATCCGTCACATGCGTCAC 59.290 57.895 0.00 0.00 0.00 3.67
233 234 2.100031 GCATCCGTCACATGCGTCA 61.100 57.895 0.00 0.00 37.51 4.35
234 235 2.703409 GCATCCGTCACATGCGTC 59.297 61.111 0.00 0.00 37.51 5.19
237 238 4.241999 GCCGCATCCGTCACATGC 62.242 66.667 0.00 0.00 42.84 4.06
238 239 2.512286 AGCCGCATCCGTCACATG 60.512 61.111 0.00 0.00 0.00 3.21
239 240 2.512286 CAGCCGCATCCGTCACAT 60.512 61.111 0.00 0.00 0.00 3.21
254 255 4.069232 TGGGAGCTTCGGTCGCAG 62.069 66.667 8.43 0.00 45.28 5.18
256 257 0.461339 TATTTGGGAGCTTCGGTCGC 60.461 55.000 0.00 3.56 42.05 5.19
257 258 2.135933 GATATTTGGGAGCTTCGGTCG 58.864 52.381 0.00 0.00 0.00 4.79
258 259 2.872858 GTGATATTTGGGAGCTTCGGTC 59.127 50.000 0.00 0.00 0.00 4.79
259 260 2.421529 GGTGATATTTGGGAGCTTCGGT 60.422 50.000 0.00 0.00 0.00 4.69
260 261 2.222027 GGTGATATTTGGGAGCTTCGG 58.778 52.381 0.00 0.00 0.00 4.30
261 262 2.917933 TGGTGATATTTGGGAGCTTCG 58.082 47.619 0.00 0.00 0.00 3.79
262 263 6.491403 ACAATATGGTGATATTTGGGAGCTTC 59.509 38.462 0.00 0.00 33.21 3.86
263 264 6.376248 ACAATATGGTGATATTTGGGAGCTT 58.624 36.000 0.00 0.00 33.21 3.74
264 265 5.957132 ACAATATGGTGATATTTGGGAGCT 58.043 37.500 0.00 0.00 33.21 4.09
265 266 6.006449 AGACAATATGGTGATATTTGGGAGC 58.994 40.000 0.00 0.00 33.21 4.70
266 267 7.720957 TGAAGACAATATGGTGATATTTGGGAG 59.279 37.037 0.00 0.00 33.21 4.30
267 268 7.581814 TGAAGACAATATGGTGATATTTGGGA 58.418 34.615 0.00 0.00 33.21 4.37
268 269 7.822161 TGAAGACAATATGGTGATATTTGGG 57.178 36.000 0.00 0.00 33.21 4.12
272 273 9.754382 GCATTTTGAAGACAATATGGTGATATT 57.246 29.630 12.44 0.00 41.89 1.28
273 274 8.916062 TGCATTTTGAAGACAATATGGTGATAT 58.084 29.630 12.44 0.00 41.89 1.63
274 275 8.291191 TGCATTTTGAAGACAATATGGTGATA 57.709 30.769 12.44 0.00 41.89 2.15
275 276 7.172868 TGCATTTTGAAGACAATATGGTGAT 57.827 32.000 12.44 0.00 41.89 3.06
276 277 6.587206 TGCATTTTGAAGACAATATGGTGA 57.413 33.333 12.44 0.00 41.89 4.02
277 278 7.036829 TGATGCATTTTGAAGACAATATGGTG 58.963 34.615 0.00 0.00 41.89 4.17
278 279 7.172868 TGATGCATTTTGAAGACAATATGGT 57.827 32.000 0.00 0.00 41.89 3.55
279 280 9.923143 ATATGATGCATTTTGAAGACAATATGG 57.077 29.630 0.00 0.00 41.89 2.74
281 282 9.923143 CCATATGATGCATTTTGAAGACAATAT 57.077 29.630 3.65 0.00 35.85 1.28
282 283 7.868922 GCCATATGATGCATTTTGAAGACAATA 59.131 33.333 3.65 0.00 35.85 1.90
283 284 6.704493 GCCATATGATGCATTTTGAAGACAAT 59.296 34.615 3.65 0.00 35.85 2.71
284 285 6.044046 GCCATATGATGCATTTTGAAGACAA 58.956 36.000 3.65 0.00 0.00 3.18
285 286 5.593968 GCCATATGATGCATTTTGAAGACA 58.406 37.500 3.65 0.00 0.00 3.41
286 287 4.678287 CGCCATATGATGCATTTTGAAGAC 59.322 41.667 3.65 0.00 0.00 3.01
287 288 4.793678 GCGCCATATGATGCATTTTGAAGA 60.794 41.667 3.65 0.00 0.00 2.87
288 289 3.427528 GCGCCATATGATGCATTTTGAAG 59.572 43.478 3.65 0.00 0.00 3.02
289 290 3.382855 GCGCCATATGATGCATTTTGAA 58.617 40.909 3.65 0.00 0.00 2.69
290 291 2.605097 CGCGCCATATGATGCATTTTGA 60.605 45.455 16.16 0.00 0.00 2.69
291 292 1.717113 CGCGCCATATGATGCATTTTG 59.283 47.619 16.16 0.00 0.00 2.44
292 293 1.931709 GCGCGCCATATGATGCATTTT 60.932 47.619 23.24 0.00 0.00 1.82
293 294 0.387622 GCGCGCCATATGATGCATTT 60.388 50.000 23.24 0.00 0.00 2.32
294 295 1.210931 GCGCGCCATATGATGCATT 59.789 52.632 23.24 0.00 0.00 3.56
295 296 2.872557 GCGCGCCATATGATGCAT 59.127 55.556 23.24 0.00 0.00 3.96
296 297 3.714963 CGCGCGCCATATGATGCA 61.715 61.111 27.72 0.00 0.00 3.96
297 298 3.716006 ACGCGCGCCATATGATGC 61.716 61.111 32.58 6.68 0.00 3.91
298 299 2.171701 CACGCGCGCCATATGATG 59.828 61.111 32.58 14.50 0.00 3.07
299 300 2.763627 TAGCACGCGCGCCATATGAT 62.764 55.000 32.58 21.43 45.49 2.45
300 301 2.763627 ATAGCACGCGCGCCATATGA 62.764 55.000 32.58 9.37 45.49 2.15
301 302 1.075979 TATAGCACGCGCGCCATATG 61.076 55.000 32.58 21.44 45.49 1.78
302 303 0.179111 ATATAGCACGCGCGCCATAT 60.179 50.000 32.58 24.93 45.49 1.78
303 304 0.389296 AATATAGCACGCGCGCCATA 60.389 50.000 32.58 20.88 45.49 2.74
304 305 1.227999 AAATATAGCACGCGCGCCAT 61.228 50.000 32.58 19.37 45.49 4.40
305 306 1.433053 AAAATATAGCACGCGCGCCA 61.433 50.000 32.58 13.05 45.49 5.69
306 307 0.991770 CAAAATATAGCACGCGCGCC 60.992 55.000 32.58 21.56 45.49 6.53
307 308 1.588305 GCAAAATATAGCACGCGCGC 61.588 55.000 32.58 23.91 45.49 6.86
308 309 0.315788 TGCAAAATATAGCACGCGCG 60.316 50.000 30.96 30.96 45.49 6.86
309 310 1.388888 CTGCAAAATATAGCACGCGC 58.611 50.000 5.73 0.00 36.62 6.86
310 311 1.388888 GCTGCAAAATATAGCACGCG 58.611 50.000 3.53 3.53 37.40 6.01
311 312 1.388888 CGCTGCAAAATATAGCACGC 58.611 50.000 0.00 0.00 37.29 5.34
312 313 1.921573 GCCGCTGCAAAATATAGCACG 60.922 52.381 0.00 0.00 37.29 5.34
313 314 1.334869 AGCCGCTGCAAAATATAGCAC 59.665 47.619 2.05 0.00 41.13 4.40
314 315 1.334556 CAGCCGCTGCAAAATATAGCA 59.665 47.619 7.61 0.00 41.13 3.49
315 316 2.042104 CAGCCGCTGCAAAATATAGC 57.958 50.000 7.61 0.00 41.13 2.97
358 359 1.724581 CGGAACCGCGAGTTTTTGC 60.725 57.895 8.23 0.00 39.40 3.68
359 360 1.082366 CCGGAACCGCGAGTTTTTG 60.082 57.895 8.23 4.39 39.40 2.44
360 361 2.900167 GCCGGAACCGCGAGTTTTT 61.900 57.895 8.23 0.00 39.40 1.94
361 362 3.351416 GCCGGAACCGCGAGTTTT 61.351 61.111 8.23 0.00 39.40 2.43
389 390 3.673956 TATGTCCAACAGGCGCGGG 62.674 63.158 8.83 0.00 0.00 6.13
390 391 2.125310 TATGTCCAACAGGCGCGG 60.125 61.111 8.83 0.00 0.00 6.46
391 392 1.421410 GAGTATGTCCAACAGGCGCG 61.421 60.000 0.00 0.00 0.00 6.86
392 393 0.108138 AGAGTATGTCCAACAGGCGC 60.108 55.000 0.00 0.00 0.00 6.53
393 394 2.386661 AAGAGTATGTCCAACAGGCG 57.613 50.000 0.00 0.00 0.00 5.52
394 395 5.122396 CACTTTAAGAGTATGTCCAACAGGC 59.878 44.000 0.00 0.00 36.65 4.85
395 396 5.643777 CCACTTTAAGAGTATGTCCAACAGG 59.356 44.000 0.00 0.00 36.65 4.00
396 397 6.231211 ACCACTTTAAGAGTATGTCCAACAG 58.769 40.000 0.00 0.00 36.65 3.16
397 398 6.182507 ACCACTTTAAGAGTATGTCCAACA 57.817 37.500 0.00 0.00 36.65 3.33
398 399 7.494952 GGATACCACTTTAAGAGTATGTCCAAC 59.505 40.741 13.83 3.16 36.65 3.77
399 400 7.181305 TGGATACCACTTTAAGAGTATGTCCAA 59.819 37.037 13.83 4.07 39.20 3.53
400 401 6.670464 TGGATACCACTTTAAGAGTATGTCCA 59.330 38.462 13.83 13.45 39.53 4.02
401 402 7.120923 TGGATACCACTTTAAGAGTATGTCC 57.879 40.000 13.83 11.77 36.65 4.02
402 403 8.880750 GTTTGGATACCACTTTAAGAGTATGTC 58.119 37.037 13.83 8.67 36.65 3.06
403 404 8.603304 AGTTTGGATACCACTTTAAGAGTATGT 58.397 33.333 13.83 0.00 36.65 2.29
404 405 9.449719 AAGTTTGGATACCACTTTAAGAGTATG 57.550 33.333 13.83 0.00 36.03 2.39
405 406 9.668497 GAAGTTTGGATACCACTTTAAGAGTAT 57.332 33.333 0.00 5.63 38.76 2.12
406 407 8.877195 AGAAGTTTGGATACCACTTTAAGAGTA 58.123 33.333 0.00 0.67 38.76 2.59
407 408 7.746703 AGAAGTTTGGATACCACTTTAAGAGT 58.253 34.615 0.00 0.00 38.76 3.24
408 409 7.878127 TGAGAAGTTTGGATACCACTTTAAGAG 59.122 37.037 0.00 0.00 38.76 2.85
409 410 7.660208 GTGAGAAGTTTGGATACCACTTTAAGA 59.340 37.037 0.00 0.00 38.76 2.10
410 411 7.444183 TGTGAGAAGTTTGGATACCACTTTAAG 59.556 37.037 0.00 0.00 38.76 1.85
411 412 7.284074 TGTGAGAAGTTTGGATACCACTTTAA 58.716 34.615 0.00 0.00 38.76 1.52
416 417 5.245531 TCATGTGAGAAGTTTGGATACCAC 58.754 41.667 0.00 0.00 30.78 4.16
433 434 2.754002 TGAGAGCTGAGAGTCTCATGTG 59.246 50.000 22.90 12.77 43.41 3.21
436 437 2.026641 GCTGAGAGCTGAGAGTCTCAT 58.973 52.381 22.90 9.66 46.29 2.90
443 444 2.346541 CCGTGGCTGAGAGCTGAGA 61.347 63.158 0.00 0.00 41.99 3.27
446 447 1.004560 TTTCCGTGGCTGAGAGCTG 60.005 57.895 0.00 0.00 41.99 4.24
447 448 1.188219 TCTTTCCGTGGCTGAGAGCT 61.188 55.000 0.00 0.00 41.99 4.09
448 449 1.016653 GTCTTTCCGTGGCTGAGAGC 61.017 60.000 0.00 0.00 41.46 4.09
449 450 0.734253 CGTCTTTCCGTGGCTGAGAG 60.734 60.000 0.00 0.00 0.00 3.20
450 451 1.289066 CGTCTTTCCGTGGCTGAGA 59.711 57.895 0.00 0.00 0.00 3.27
469 470 0.162507 CAAGTTGCAAGACGCTCGAG 59.837 55.000 8.45 8.45 43.06 4.04
714 759 6.706055 GCTCGCTGCAAATATTATACAGTA 57.294 37.500 0.00 0.00 42.31 2.74
763 1184 5.325239 TGACACTCATCTTCTGAACTAGGA 58.675 41.667 0.00 0.00 32.14 2.94
764 1185 5.651387 TGACACTCATCTTCTGAACTAGG 57.349 43.478 0.00 0.00 32.14 3.02
769 1212 4.745125 GTCGTTTGACACTCATCTTCTGAA 59.255 41.667 0.00 0.00 44.82 3.02
771 1214 4.637574 GTCGTTTGACACTCATCTTCTG 57.362 45.455 0.00 0.00 44.82 3.02
860 1341 1.733399 GCACCGTCTTCGTCCTCAC 60.733 63.158 0.00 0.00 35.01 3.51
922 1414 4.671569 GAGCTAGCGGATGGGCGG 62.672 72.222 9.55 0.00 38.18 6.13
928 1420 2.203714 GGGAGGGAGCTAGCGGAT 60.204 66.667 9.55 0.00 0.00 4.18
932 1424 1.690985 AAGGTGGGAGGGAGCTAGC 60.691 63.158 6.62 6.62 0.00 3.42
933 1425 1.051556 GGAAGGTGGGAGGGAGCTAG 61.052 65.000 0.00 0.00 0.00 3.42
934 1426 1.003051 GGAAGGTGGGAGGGAGCTA 59.997 63.158 0.00 0.00 0.00 3.32
935 1427 2.285743 GGAAGGTGGGAGGGAGCT 60.286 66.667 0.00 0.00 0.00 4.09
936 1428 3.787001 CGGAAGGTGGGAGGGAGC 61.787 72.222 0.00 0.00 0.00 4.70
937 1429 1.383248 ATCGGAAGGTGGGAGGGAG 60.383 63.158 0.00 0.00 0.00 4.30
938 1430 1.382695 GATCGGAAGGTGGGAGGGA 60.383 63.158 0.00 0.00 0.00 4.20
939 1431 2.444256 GGATCGGAAGGTGGGAGGG 61.444 68.421 0.00 0.00 0.00 4.30
940 1432 2.797278 CGGATCGGAAGGTGGGAGG 61.797 68.421 0.00 0.00 0.00 4.30
941 1433 2.815308 CGGATCGGAAGGTGGGAG 59.185 66.667 0.00 0.00 0.00 4.30
942 1434 3.467226 GCGGATCGGAAGGTGGGA 61.467 66.667 4.16 0.00 0.00 4.37
943 1435 4.547367 GGCGGATCGGAAGGTGGG 62.547 72.222 4.16 0.00 0.00 4.61
944 1436 4.891727 CGGCGGATCGGAAGGTGG 62.892 72.222 4.16 0.00 0.00 4.61
947 1439 4.951963 GAGCGGCGGATCGGAAGG 62.952 72.222 9.78 0.00 0.00 3.46
948 1440 4.951963 GGAGCGGCGGATCGGAAG 62.952 72.222 9.78 0.00 0.00 3.46
1076 1592 2.202987 GAGAGCGGTCATGGCTGG 60.203 66.667 18.15 0.00 41.72 4.85
1151 1674 2.431260 GGCAGCGGCATTGTTGTG 60.431 61.111 11.88 0.00 43.71 3.33
1214 1740 3.264845 GGCCACCTTCCCCTCCAA 61.265 66.667 0.00 0.00 0.00 3.53
1729 2273 1.966451 GTTCTTGGTCAGCCCCACG 60.966 63.158 0.00 0.00 33.14 4.94
1844 2388 2.579201 CTCGTCCTCGCCATGGTT 59.421 61.111 14.67 0.00 36.96 3.67
1885 2435 4.478371 TCGACCTCCTCCGCGCTA 62.478 66.667 5.56 0.00 0.00 4.26
1900 2450 1.361993 CATCTCCTCCGCCTTCTCG 59.638 63.158 0.00 0.00 0.00 4.04
2014 2564 3.524648 GACGAGGTTGTGCCCGGAA 62.525 63.158 0.73 0.00 38.26 4.30
2246 3961 1.308998 CCACTCAGGTCAAACACACC 58.691 55.000 0.00 0.00 0.00 4.16
2257 3972 3.339253 TCATCACATGAACCACTCAGG 57.661 47.619 0.00 0.00 41.73 3.86
2316 4042 1.669760 GATCCGGGCACGACAACAA 60.670 57.895 11.66 0.00 44.60 2.83
2327 4053 6.113411 ACTAAACAGTTATTCTTGATCCGGG 58.887 40.000 0.00 0.00 0.00 5.73
2363 4089 1.174783 TCCTACTCCAGCGTCACTTC 58.825 55.000 0.00 0.00 0.00 3.01
2367 4093 3.512329 TGTATTTTCCTACTCCAGCGTCA 59.488 43.478 0.00 0.00 0.00 4.35
2368 4094 3.864003 GTGTATTTTCCTACTCCAGCGTC 59.136 47.826 0.00 0.00 0.00 5.19
2369 4095 3.259876 TGTGTATTTTCCTACTCCAGCGT 59.740 43.478 0.00 0.00 0.00 5.07
2370 4096 3.857052 TGTGTATTTTCCTACTCCAGCG 58.143 45.455 0.00 0.00 0.00 5.18
2371 4097 4.081087 TCCTGTGTATTTTCCTACTCCAGC 60.081 45.833 0.00 0.00 0.00 4.85
2372 4098 5.665459 CTCCTGTGTATTTTCCTACTCCAG 58.335 45.833 0.00 0.00 0.00 3.86
2373 4099 4.081087 GCTCCTGTGTATTTTCCTACTCCA 60.081 45.833 0.00 0.00 0.00 3.86
2374 4100 4.162509 AGCTCCTGTGTATTTTCCTACTCC 59.837 45.833 0.00 0.00 0.00 3.85
2375 4101 5.346181 AGCTCCTGTGTATTTTCCTACTC 57.654 43.478 0.00 0.00 0.00 2.59
2376 4102 4.162509 GGAGCTCCTGTGTATTTTCCTACT 59.837 45.833 26.25 0.00 0.00 2.57
2377 4103 4.162509 AGGAGCTCCTGTGTATTTTCCTAC 59.837 45.833 34.74 0.11 46.55 3.18
2378 4104 4.362677 AGGAGCTCCTGTGTATTTTCCTA 58.637 43.478 34.74 0.00 46.55 2.94
2379 4105 3.185455 AGGAGCTCCTGTGTATTTTCCT 58.815 45.455 34.74 5.38 46.55 3.36
2380 4106 3.636153 AGGAGCTCCTGTGTATTTTCC 57.364 47.619 34.74 2.68 46.55 3.13
2392 4118 0.463474 GTGAAGCATCCAGGAGCTCC 60.463 60.000 26.22 26.22 40.90 4.70
2393 4119 0.463474 GGTGAAGCATCCAGGAGCTC 60.463 60.000 4.71 4.71 40.90 4.09
2394 4120 1.606531 GGTGAAGCATCCAGGAGCT 59.393 57.895 7.42 7.42 44.31 4.09
2395 4121 1.452833 GGGTGAAGCATCCAGGAGC 60.453 63.158 0.00 0.00 34.21 4.70
2396 4122 1.225704 GGGGTGAAGCATCCAGGAG 59.774 63.158 0.00 0.00 36.11 3.69
2397 4123 2.308722 GGGGGTGAAGCATCCAGGA 61.309 63.158 0.00 0.00 36.11 3.86
2398 4124 0.988145 TAGGGGGTGAAGCATCCAGG 60.988 60.000 0.00 0.00 36.11 4.45
2399 4125 1.143813 ATAGGGGGTGAAGCATCCAG 58.856 55.000 0.00 0.00 36.11 3.86
2400 4126 2.054799 GTATAGGGGGTGAAGCATCCA 58.945 52.381 0.00 0.00 36.11 3.41
2401 4127 1.002087 CGTATAGGGGGTGAAGCATCC 59.998 57.143 0.00 0.00 33.05 3.51
2402 4128 1.968493 TCGTATAGGGGGTGAAGCATC 59.032 52.381 0.00 0.00 0.00 3.91
2403 4129 2.097110 TCGTATAGGGGGTGAAGCAT 57.903 50.000 0.00 0.00 0.00 3.79
2404 4130 1.868713 TTCGTATAGGGGGTGAAGCA 58.131 50.000 0.00 0.00 0.00 3.91
2405 4131 4.820894 ATATTCGTATAGGGGGTGAAGC 57.179 45.455 0.00 0.00 0.00 3.86
2406 4132 6.817140 GCTTAATATTCGTATAGGGGGTGAAG 59.183 42.308 0.00 0.00 0.00 3.02
2407 4133 6.572898 CGCTTAATATTCGTATAGGGGGTGAA 60.573 42.308 0.00 0.00 0.00 3.18
2408 4134 5.105635 CGCTTAATATTCGTATAGGGGGTGA 60.106 44.000 0.00 0.00 0.00 4.02
2409 4135 5.107133 CGCTTAATATTCGTATAGGGGGTG 58.893 45.833 0.00 0.00 0.00 4.61
2410 4136 4.774200 ACGCTTAATATTCGTATAGGGGGT 59.226 41.667 0.00 0.00 34.41 4.95
2411 4137 5.334724 ACGCTTAATATTCGTATAGGGGG 57.665 43.478 0.00 0.00 34.41 5.40
2412 4138 8.761575 TTTTACGCTTAATATTCGTATAGGGG 57.238 34.615 8.25 0.00 38.30 4.79
2461 4187 9.379770 CCCTGGTTTGATATCCCTAAATTTTAT 57.620 33.333 0.00 0.00 0.00 1.40
2462 4188 8.348354 ACCCTGGTTTGATATCCCTAAATTTTA 58.652 33.333 0.00 0.00 0.00 1.52
2463 4189 7.196187 ACCCTGGTTTGATATCCCTAAATTTT 58.804 34.615 0.00 0.00 0.00 1.82
2464 4190 6.752091 ACCCTGGTTTGATATCCCTAAATTT 58.248 36.000 0.00 0.00 0.00 1.82
2465 4191 6.355588 ACCCTGGTTTGATATCCCTAAATT 57.644 37.500 0.00 0.00 0.00 1.82
2466 4192 6.162241 AGAACCCTGGTTTGATATCCCTAAAT 59.838 38.462 2.55 0.00 38.60 1.40
2467 4193 5.494706 AGAACCCTGGTTTGATATCCCTAAA 59.505 40.000 2.55 0.00 38.60 1.85
2468 4194 5.043762 AGAACCCTGGTTTGATATCCCTAA 58.956 41.667 2.55 0.00 38.60 2.69
2469 4195 4.641868 AGAACCCTGGTTTGATATCCCTA 58.358 43.478 2.55 0.00 38.60 3.53
2470 4196 3.459969 GAGAACCCTGGTTTGATATCCCT 59.540 47.826 2.55 0.00 38.60 4.20
2471 4197 3.202151 TGAGAACCCTGGTTTGATATCCC 59.798 47.826 2.55 0.00 38.60 3.85
2472 4198 4.503714 TGAGAACCCTGGTTTGATATCC 57.496 45.455 2.55 0.00 38.60 2.59
2473 4199 6.360618 AGATTGAGAACCCTGGTTTGATATC 58.639 40.000 2.55 0.00 38.60 1.63
2474 4200 6.332976 AGATTGAGAACCCTGGTTTGATAT 57.667 37.500 2.55 0.00 38.60 1.63
2475 4201 5.779241 AGATTGAGAACCCTGGTTTGATA 57.221 39.130 2.55 0.00 38.60 2.15
2476 4202 4.664688 AGATTGAGAACCCTGGTTTGAT 57.335 40.909 2.55 0.00 38.60 2.57
2477 4203 4.597507 AGTAGATTGAGAACCCTGGTTTGA 59.402 41.667 2.55 0.00 38.60 2.69
2478 4204 4.911390 AGTAGATTGAGAACCCTGGTTTG 58.089 43.478 2.55 0.00 38.60 2.93
2479 4205 4.597507 TGAGTAGATTGAGAACCCTGGTTT 59.402 41.667 2.55 0.00 38.60 3.27
2480 4206 4.020128 GTGAGTAGATTGAGAACCCTGGTT 60.020 45.833 0.07 0.07 41.54 3.67
2481 4207 3.515901 GTGAGTAGATTGAGAACCCTGGT 59.484 47.826 0.00 0.00 0.00 4.00
2482 4208 3.429547 CGTGAGTAGATTGAGAACCCTGG 60.430 52.174 0.00 0.00 0.00 4.45
2483 4209 3.193691 ACGTGAGTAGATTGAGAACCCTG 59.806 47.826 0.00 0.00 46.88 4.45
2484 4210 3.432378 ACGTGAGTAGATTGAGAACCCT 58.568 45.455 0.00 0.00 46.88 4.34
2485 4211 3.870633 ACGTGAGTAGATTGAGAACCC 57.129 47.619 0.00 0.00 46.88 4.11
2490 4216 7.095649 TGAAATTTCACACGTGAGTAGATTGAG 60.096 37.037 25.01 0.00 41.13 3.02
2491 4217 6.704050 TGAAATTTCACACGTGAGTAGATTGA 59.296 34.615 25.01 10.74 41.13 2.57
2492 4218 6.887368 TGAAATTTCACACGTGAGTAGATTG 58.113 36.000 25.01 8.23 41.13 2.67
2493 4219 7.387673 TCATGAAATTTCACACGTGAGTAGATT 59.612 33.333 25.01 12.81 41.12 2.40
2494 4220 6.873605 TCATGAAATTTCACACGTGAGTAGAT 59.126 34.615 25.01 7.53 41.12 1.98
2495 4221 6.220201 TCATGAAATTTCACACGTGAGTAGA 58.780 36.000 25.01 11.34 41.12 2.59
2496 4222 6.466308 TCATGAAATTTCACACGTGAGTAG 57.534 37.500 25.01 9.06 41.12 2.57
2497 4223 6.852858 TTCATGAAATTTCACACGTGAGTA 57.147 33.333 25.01 5.18 41.12 2.59
2498 4224 5.749596 TTCATGAAATTTCACACGTGAGT 57.250 34.783 25.01 1.94 42.05 3.41
2499 4225 7.448588 TTTTTCATGAAATTTCACACGTGAG 57.551 32.000 25.01 15.63 41.13 3.51
2536 4262 5.473504 ACATTATTTCCTTCGCCATGGATAC 59.526 40.000 18.40 0.00 31.76 2.24
2537 4263 5.630121 ACATTATTTCCTTCGCCATGGATA 58.370 37.500 18.40 0.00 31.76 2.59
2538 4264 4.473444 ACATTATTTCCTTCGCCATGGAT 58.527 39.130 18.40 0.00 31.76 3.41
2539 4265 3.882888 GACATTATTTCCTTCGCCATGGA 59.117 43.478 18.40 0.00 0.00 3.41
2540 4266 3.004734 GGACATTATTTCCTTCGCCATGG 59.995 47.826 7.63 7.63 0.00 3.66
2541 4267 3.303990 CGGACATTATTTCCTTCGCCATG 60.304 47.826 0.00 0.00 0.00 3.66
2542 4268 2.878406 CGGACATTATTTCCTTCGCCAT 59.122 45.455 0.00 0.00 0.00 4.40
2543 4269 2.285083 CGGACATTATTTCCTTCGCCA 58.715 47.619 0.00 0.00 0.00 5.69
2544 4270 2.285977 ACGGACATTATTTCCTTCGCC 58.714 47.619 0.00 0.00 0.00 5.54
2545 4271 3.866910 TGTACGGACATTATTTCCTTCGC 59.133 43.478 0.00 0.00 0.00 4.70
2546 4272 6.411630 TTTGTACGGACATTATTTCCTTCG 57.588 37.500 0.00 0.00 34.86 3.79
2547 4273 9.285770 GATTTTTGTACGGACATTATTTCCTTC 57.714 33.333 0.00 0.00 34.86 3.46
2548 4274 8.248253 GGATTTTTGTACGGACATTATTTCCTT 58.752 33.333 0.00 0.00 34.86 3.36
2549 4275 7.394923 TGGATTTTTGTACGGACATTATTTCCT 59.605 33.333 0.00 0.00 34.86 3.36
2550 4276 7.540299 TGGATTTTTGTACGGACATTATTTCC 58.460 34.615 0.00 5.84 34.86 3.13
2551 4277 9.233232 GATGGATTTTTGTACGGACATTATTTC 57.767 33.333 0.00 0.00 34.86 2.17
2552 4278 8.194769 GGATGGATTTTTGTACGGACATTATTT 58.805 33.333 0.00 0.00 34.86 1.40
2553 4279 7.340743 TGGATGGATTTTTGTACGGACATTATT 59.659 33.333 0.00 0.00 34.86 1.40
2554 4280 6.831353 TGGATGGATTTTTGTACGGACATTAT 59.169 34.615 0.00 0.00 34.86 1.28
2555 4281 6.181190 TGGATGGATTTTTGTACGGACATTA 58.819 36.000 0.00 0.00 34.86 1.90
2556 4282 5.013547 TGGATGGATTTTTGTACGGACATT 58.986 37.500 0.00 0.00 34.86 2.71
2557 4283 4.594970 TGGATGGATTTTTGTACGGACAT 58.405 39.130 0.00 0.00 34.86 3.06
2558 4284 4.022413 TGGATGGATTTTTGTACGGACA 57.978 40.909 0.00 0.00 0.00 4.02
2559 4285 5.158494 GTTTGGATGGATTTTTGTACGGAC 58.842 41.667 0.00 0.00 0.00 4.79
2560 4286 4.827835 TGTTTGGATGGATTTTTGTACGGA 59.172 37.500 0.00 0.00 0.00 4.69
2561 4287 5.048364 TCTGTTTGGATGGATTTTTGTACGG 60.048 40.000 0.00 0.00 0.00 4.02
2562 4288 6.007936 TCTGTTTGGATGGATTTTTGTACG 57.992 37.500 0.00 0.00 0.00 3.67
2563 4289 8.831715 AAATCTGTTTGGATGGATTTTTGTAC 57.168 30.769 0.00 0.00 35.65 2.90
2564 4290 9.844257 AAAAATCTGTTTGGATGGATTTTTGTA 57.156 25.926 18.20 0.00 46.85 2.41
2565 4291 8.750515 AAAAATCTGTTTGGATGGATTTTTGT 57.249 26.923 18.20 2.92 46.85 2.83
2606 4332 8.756376 CGTATTCGTAACAAAAGAGACAAAAA 57.244 30.769 0.00 0.00 0.00 1.94
2624 4350 2.720590 CGACAACCAGCAAACGTATTCG 60.721 50.000 0.00 0.00 43.34 3.34
2625 4351 2.222445 ACGACAACCAGCAAACGTATTC 59.778 45.455 0.00 0.00 32.42 1.75
2626 4352 2.032377 CACGACAACCAGCAAACGTATT 60.032 45.455 0.00 0.00 32.89 1.89
2627 4353 1.529438 CACGACAACCAGCAAACGTAT 59.471 47.619 0.00 0.00 32.89 3.06
2628 4354 0.931702 CACGACAACCAGCAAACGTA 59.068 50.000 0.00 0.00 32.89 3.57
2629 4355 1.711060 CCACGACAACCAGCAAACGT 61.711 55.000 0.00 0.00 34.40 3.99
2630 4356 1.010125 CCACGACAACCAGCAAACG 60.010 57.895 0.00 0.00 0.00 3.60
2631 4357 1.003223 GTACCACGACAACCAGCAAAC 60.003 52.381 0.00 0.00 0.00 2.93
2632 4358 1.134340 AGTACCACGACAACCAGCAAA 60.134 47.619 0.00 0.00 0.00 3.68
2633 4359 0.466543 AGTACCACGACAACCAGCAA 59.533 50.000 0.00 0.00 0.00 3.91
2634 4360 1.330234 TAGTACCACGACAACCAGCA 58.670 50.000 0.00 0.00 0.00 4.41
2635 4361 2.029649 TCTTAGTACCACGACAACCAGC 60.030 50.000 0.00 0.00 0.00 4.85
2636 4362 3.255149 AGTCTTAGTACCACGACAACCAG 59.745 47.826 1.13 0.00 0.00 4.00
2637 4363 3.005050 CAGTCTTAGTACCACGACAACCA 59.995 47.826 1.13 0.00 0.00 3.67
2638 4364 3.254166 TCAGTCTTAGTACCACGACAACC 59.746 47.826 1.13 0.00 0.00 3.77
2807 4537 1.837538 CGCACCCCTGTAAACACACG 61.838 60.000 0.00 0.00 0.00 4.49
3040 4820 3.464907 CATGAAGCATTCCACTCGAGAT 58.535 45.455 21.68 0.00 46.93 2.75
3065 4845 3.131933 CGAAGAGGAGTCATCATCCACTT 59.868 47.826 7.65 4.63 46.39 3.16
3150 4930 7.093727 GCTAATGATGAAGCTATGTACCTAGGA 60.094 40.741 17.98 0.00 35.80 2.94
3280 5063 3.486875 CGACTGAAAAAGAAGTTGGCGTT 60.487 43.478 0.00 0.00 0.00 4.84
3326 5109 5.415701 AGTTCTTTCAGCAAAAGTTCACTCA 59.584 36.000 10.34 0.00 44.07 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.