Multiple sequence alignment - TraesCS2D01G085200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G085200 chr2D 100.000 3256 0 0 1 3256 36879383 36876128 0.000000e+00 6013.0
1 TraesCS2D01G085200 chr7D 96.030 1713 36 14 1572 3256 538837025 538838733 0.000000e+00 2758.0
2 TraesCS2D01G085200 chr7D 95.622 1713 43 10 1572 3256 112190325 112188617 0.000000e+00 2719.0
3 TraesCS2D01G085200 chr7D 93.812 1713 39 16 1572 3256 426836256 426834583 0.000000e+00 2514.0
4 TraesCS2D01G085200 chr7D 97.027 1110 19 5 1572 2680 634768825 634769921 0.000000e+00 1855.0
5 TraesCS2D01G085200 chr7D 96.262 963 31 3 2295 3256 445243250 445244208 0.000000e+00 1574.0
6 TraesCS2D01G085200 chr7D 94.601 889 34 8 694 1576 112191311 112190431 0.000000e+00 1363.0
7 TraesCS2D01G085200 chr7D 94.570 884 37 5 698 1576 445228926 445229803 0.000000e+00 1356.0
8 TraesCS2D01G085200 chr7D 94.444 882 38 8 698 1576 426837235 426836362 0.000000e+00 1347.0
9 TraesCS2D01G085200 chr7D 94.250 887 38 5 691 1576 538836045 538836919 0.000000e+00 1343.0
10 TraesCS2D01G085200 chr7D 97.531 729 17 1 1572 2300 445229909 445230636 0.000000e+00 1245.0
11 TraesCS2D01G085200 chr7D 83.051 118 16 4 4 121 213969943 213969830 1.600000e-18 104.0
12 TraesCS2D01G085200 chr4D 95.738 1713 39 15 1572 3256 392723863 392722157 0.000000e+00 2728.0
13 TraesCS2D01G085200 chr5D 95.330 1713 36 16 1572 3256 422771351 422773047 0.000000e+00 2680.0
14 TraesCS2D01G085200 chr5D 93.987 1713 40 16 1572 3256 356118517 356116840 0.000000e+00 2534.0
15 TraesCS2D01G085200 chr5D 94.898 882 34 8 698 1576 52374526 52373653 0.000000e+00 1369.0
16 TraesCS2D01G085200 chr5D 94.558 882 36 8 698 1576 356119495 356118623 0.000000e+00 1352.0
17 TraesCS2D01G085200 chr5D 96.602 618 18 1 2639 3256 52372445 52371831 0.000000e+00 1022.0
18 TraesCS2D01G085200 chr5D 81.356 118 18 4 4 120 272148363 272148249 3.460000e-15 93.5
19 TraesCS2D01G085200 chr3D 95.213 1713 41 15 1572 3256 52843416 52845115 0.000000e+00 2671.0
20 TraesCS2D01G085200 chr3D 94.665 881 32 9 698 1576 52842443 52843310 0.000000e+00 1352.0
21 TraesCS2D01G085200 chr7A 93.488 1720 67 15 1572 3256 731436135 731437844 0.000000e+00 2514.0
22 TraesCS2D01G085200 chr5A 92.691 1724 70 10 1578 3256 78442913 78441201 0.000000e+00 2435.0
23 TraesCS2D01G085200 chr5A 95.041 1109 30 10 1572 2680 593748400 593749483 0.000000e+00 1720.0
24 TraesCS2D01G085200 chr5A 94.382 890 34 10 695 1576 546845986 546846867 0.000000e+00 1352.0
25 TraesCS2D01G085200 chr1A 96.300 1108 34 5 1574 2680 20825486 20824385 0.000000e+00 1812.0
26 TraesCS2D01G085200 chr1A 95.303 1107 27 10 1574 2680 13812946 13811865 0.000000e+00 1733.0
27 TraesCS2D01G085200 chr4A 95.114 880 40 3 698 1576 616788689 616787812 0.000000e+00 1384.0
28 TraesCS2D01G085200 chr3B 86.842 76 9 1 1 76 654645405 654645479 2.080000e-12 84.2
29 TraesCS2D01G085200 chr3B 80.342 117 16 6 1 116 654644938 654645048 7.490000e-12 82.4
30 TraesCS2D01G085200 chr3B 87.879 66 7 1 11 76 654645552 654645616 3.480000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G085200 chr2D 36876128 36879383 3255 True 6013.0 6013 100.0000 1 3256 1 chr2D.!!$R1 3255
1 TraesCS2D01G085200 chr7D 538836045 538838733 2688 False 2050.5 2758 95.1400 691 3256 2 chr7D.!!$F4 2565
2 TraesCS2D01G085200 chr7D 112188617 112191311 2694 True 2041.0 2719 95.1115 694 3256 2 chr7D.!!$R2 2562
3 TraesCS2D01G085200 chr7D 426834583 426837235 2652 True 1930.5 2514 94.1280 698 3256 2 chr7D.!!$R3 2558
4 TraesCS2D01G085200 chr7D 634768825 634769921 1096 False 1855.0 1855 97.0270 1572 2680 1 chr7D.!!$F2 1108
5 TraesCS2D01G085200 chr7D 445243250 445244208 958 False 1574.0 1574 96.2620 2295 3256 1 chr7D.!!$F1 961
6 TraesCS2D01G085200 chr7D 445228926 445230636 1710 False 1300.5 1356 96.0505 698 2300 2 chr7D.!!$F3 1602
7 TraesCS2D01G085200 chr4D 392722157 392723863 1706 True 2728.0 2728 95.7380 1572 3256 1 chr4D.!!$R1 1684
8 TraesCS2D01G085200 chr5D 422771351 422773047 1696 False 2680.0 2680 95.3300 1572 3256 1 chr5D.!!$F1 1684
9 TraesCS2D01G085200 chr5D 356116840 356119495 2655 True 1943.0 2534 94.2725 698 3256 2 chr5D.!!$R3 2558
10 TraesCS2D01G085200 chr5D 52371831 52374526 2695 True 1195.5 1369 95.7500 698 3256 2 chr5D.!!$R2 2558
11 TraesCS2D01G085200 chr3D 52842443 52845115 2672 False 2011.5 2671 94.9390 698 3256 2 chr3D.!!$F1 2558
12 TraesCS2D01G085200 chr7A 731436135 731437844 1709 False 2514.0 2514 93.4880 1572 3256 1 chr7A.!!$F1 1684
13 TraesCS2D01G085200 chr5A 78441201 78442913 1712 True 2435.0 2435 92.6910 1578 3256 1 chr5A.!!$R1 1678
14 TraesCS2D01G085200 chr5A 593748400 593749483 1083 False 1720.0 1720 95.0410 1572 2680 1 chr5A.!!$F2 1108
15 TraesCS2D01G085200 chr5A 546845986 546846867 881 False 1352.0 1352 94.3820 695 1576 1 chr5A.!!$F1 881
16 TraesCS2D01G085200 chr1A 20824385 20825486 1101 True 1812.0 1812 96.3000 1574 2680 1 chr1A.!!$R2 1106
17 TraesCS2D01G085200 chr1A 13811865 13812946 1081 True 1733.0 1733 95.3030 1574 2680 1 chr1A.!!$R1 1106
18 TraesCS2D01G085200 chr4A 616787812 616788689 877 True 1384.0 1384 95.1140 698 1576 1 chr4A.!!$R1 878

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 591 0.034670 CCTCCCTTTCTTCCAGGCAG 60.035 60.0 0.00 0.0 0.0 4.85 F
681 682 0.102481 CTACGCGAAGGCTGGTACAT 59.898 55.0 15.93 0.0 38.2 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2016 2181 3.161866 GGCCTTCCTGGTGTTTTGAATA 58.838 45.455 0.0 0.0 38.35 1.75 R
2502 2693 6.964370 TCTGTGAAATGTTACAACAAACTTCG 59.036 34.615 0.0 0.0 43.03 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 7.452880 TGTATGAAGAAGATTGAACAAAGGG 57.547 36.000 0.00 0.00 0.00 3.95
101 102 7.230747 TGTATGAAGAAGATTGAACAAAGGGA 58.769 34.615 0.00 0.00 0.00 4.20
102 103 7.890127 TGTATGAAGAAGATTGAACAAAGGGAT 59.110 33.333 0.00 0.00 0.00 3.85
103 104 6.579666 TGAAGAAGATTGAACAAAGGGATG 57.420 37.500 0.00 0.00 0.00 3.51
104 105 5.477984 TGAAGAAGATTGAACAAAGGGATGG 59.522 40.000 0.00 0.00 0.00 3.51
105 106 5.003096 AGAAGATTGAACAAAGGGATGGT 57.997 39.130 0.00 0.00 0.00 3.55
106 107 4.768968 AGAAGATTGAACAAAGGGATGGTG 59.231 41.667 0.00 0.00 0.00 4.17
107 108 4.387026 AGATTGAACAAAGGGATGGTGA 57.613 40.909 0.00 0.00 0.00 4.02
108 109 4.338879 AGATTGAACAAAGGGATGGTGAG 58.661 43.478 0.00 0.00 0.00 3.51
109 110 3.874383 TTGAACAAAGGGATGGTGAGA 57.126 42.857 0.00 0.00 0.00 3.27
110 111 3.874383 TGAACAAAGGGATGGTGAGAA 57.126 42.857 0.00 0.00 0.00 2.87
111 112 4.177537 TGAACAAAGGGATGGTGAGAAA 57.822 40.909 0.00 0.00 0.00 2.52
112 113 4.541705 TGAACAAAGGGATGGTGAGAAAA 58.458 39.130 0.00 0.00 0.00 2.29
113 114 4.959210 TGAACAAAGGGATGGTGAGAAAAA 59.041 37.500 0.00 0.00 0.00 1.94
154 155 9.257651 CCTTTTTAAGTAGTAGATATTGTCCCG 57.742 37.037 0.00 0.00 0.00 5.14
155 156 8.652810 TTTTTAAGTAGTAGATATTGTCCCGC 57.347 34.615 0.00 0.00 0.00 6.13
156 157 4.868314 AAGTAGTAGATATTGTCCCGCC 57.132 45.455 0.00 0.00 0.00 6.13
157 158 3.840991 AGTAGTAGATATTGTCCCGCCA 58.159 45.455 0.00 0.00 0.00 5.69
158 159 4.220724 AGTAGTAGATATTGTCCCGCCAA 58.779 43.478 0.00 0.00 0.00 4.52
159 160 3.753294 AGTAGATATTGTCCCGCCAAG 57.247 47.619 0.00 0.00 0.00 3.61
160 161 3.039011 AGTAGATATTGTCCCGCCAAGT 58.961 45.455 0.00 0.00 0.00 3.16
161 162 4.220724 AGTAGATATTGTCCCGCCAAGTA 58.779 43.478 0.00 0.00 0.00 2.24
162 163 3.470645 AGATATTGTCCCGCCAAGTAC 57.529 47.619 0.00 0.00 0.00 2.73
163 164 2.132762 GATATTGTCCCGCCAAGTACG 58.867 52.381 0.00 0.00 0.00 3.67
176 177 4.386867 CCAAGTACGGCAAGAGATAAGA 57.613 45.455 0.00 0.00 0.00 2.10
177 178 4.113354 CCAAGTACGGCAAGAGATAAGAC 58.887 47.826 0.00 0.00 0.00 3.01
178 179 4.113354 CAAGTACGGCAAGAGATAAGACC 58.887 47.826 0.00 0.00 0.00 3.85
179 180 3.362706 AGTACGGCAAGAGATAAGACCA 58.637 45.455 0.00 0.00 0.00 4.02
180 181 3.961408 AGTACGGCAAGAGATAAGACCAT 59.039 43.478 0.00 0.00 0.00 3.55
181 182 3.460857 ACGGCAAGAGATAAGACCATC 57.539 47.619 0.00 0.00 0.00 3.51
182 183 3.034635 ACGGCAAGAGATAAGACCATCT 58.965 45.455 0.00 0.00 37.99 2.90
183 184 3.181471 ACGGCAAGAGATAAGACCATCTG 60.181 47.826 0.00 0.00 35.37 2.90
184 185 3.137533 GGCAAGAGATAAGACCATCTGC 58.862 50.000 0.00 0.00 35.37 4.26
185 186 3.181456 GGCAAGAGATAAGACCATCTGCT 60.181 47.826 0.00 0.00 35.37 4.24
186 187 4.039730 GGCAAGAGATAAGACCATCTGCTA 59.960 45.833 0.00 0.00 35.37 3.49
187 188 5.229423 GCAAGAGATAAGACCATCTGCTAG 58.771 45.833 0.00 0.00 35.37 3.42
188 189 5.221422 GCAAGAGATAAGACCATCTGCTAGT 60.221 44.000 0.00 0.00 35.37 2.57
189 190 6.446318 CAAGAGATAAGACCATCTGCTAGTC 58.554 44.000 0.00 0.00 35.37 2.59
190 191 5.952387 AGAGATAAGACCATCTGCTAGTCT 58.048 41.667 0.00 0.00 42.58 3.24
191 192 7.085476 AGAGATAAGACCATCTGCTAGTCTA 57.915 40.000 0.00 0.00 39.92 2.59
192 193 6.940298 AGAGATAAGACCATCTGCTAGTCTAC 59.060 42.308 0.00 0.00 39.92 2.59
193 194 6.848069 AGATAAGACCATCTGCTAGTCTACT 58.152 40.000 0.00 0.00 39.92 2.57
194 195 6.714810 AGATAAGACCATCTGCTAGTCTACTG 59.285 42.308 0.00 0.00 39.92 2.74
195 196 2.955660 AGACCATCTGCTAGTCTACTGC 59.044 50.000 0.00 0.00 39.06 4.40
196 197 2.690497 GACCATCTGCTAGTCTACTGCA 59.310 50.000 0.00 6.93 35.30 4.41
197 198 2.428890 ACCATCTGCTAGTCTACTGCAC 59.571 50.000 0.00 0.00 32.91 4.57
198 199 2.428530 CCATCTGCTAGTCTACTGCACA 59.571 50.000 0.00 0.00 32.91 4.57
199 200 3.118992 CCATCTGCTAGTCTACTGCACAA 60.119 47.826 0.00 0.00 32.91 3.33
200 201 4.442612 CCATCTGCTAGTCTACTGCACAAT 60.443 45.833 0.00 0.00 32.91 2.71
201 202 5.221322 CCATCTGCTAGTCTACTGCACAATA 60.221 44.000 0.00 0.00 32.91 1.90
202 203 6.453943 CATCTGCTAGTCTACTGCACAATAT 58.546 40.000 0.00 0.00 32.91 1.28
203 204 7.309438 CCATCTGCTAGTCTACTGCACAATATA 60.309 40.741 0.00 0.00 32.91 0.86
204 205 7.582667 TCTGCTAGTCTACTGCACAATATAA 57.417 36.000 0.00 0.00 32.91 0.98
205 206 8.183104 TCTGCTAGTCTACTGCACAATATAAT 57.817 34.615 0.00 0.00 32.91 1.28
206 207 8.084684 TCTGCTAGTCTACTGCACAATATAATG 58.915 37.037 0.00 0.00 32.91 1.90
207 208 7.951591 TGCTAGTCTACTGCACAATATAATGA 58.048 34.615 0.00 0.00 0.00 2.57
208 209 8.421002 TGCTAGTCTACTGCACAATATAATGAA 58.579 33.333 0.00 0.00 0.00 2.57
209 210 9.429359 GCTAGTCTACTGCACAATATAATGAAT 57.571 33.333 0.00 0.00 0.00 2.57
212 213 9.429359 AGTCTACTGCACAATATAATGAATAGC 57.571 33.333 0.00 0.00 0.00 2.97
213 214 9.208022 GTCTACTGCACAATATAATGAATAGCA 57.792 33.333 0.00 0.00 0.00 3.49
214 215 9.777297 TCTACTGCACAATATAATGAATAGCAA 57.223 29.630 0.00 0.00 0.00 3.91
217 218 8.906867 ACTGCACAATATAATGAATAGCAAACT 58.093 29.630 0.00 0.00 0.00 2.66
218 219 9.740239 CTGCACAATATAATGAATAGCAAACTT 57.260 29.630 0.00 0.00 0.00 2.66
229 230 7.936496 TGAATAGCAAACTTATGGATGTTGA 57.064 32.000 0.00 0.00 0.00 3.18
230 231 8.523915 TGAATAGCAAACTTATGGATGTTGAT 57.476 30.769 0.00 0.00 0.00 2.57
231 232 9.625747 TGAATAGCAAACTTATGGATGTTGATA 57.374 29.630 0.00 0.00 0.00 2.15
234 235 7.944729 AGCAAACTTATGGATGTTGATAACT 57.055 32.000 0.00 0.00 0.00 2.24
235 236 8.353423 AGCAAACTTATGGATGTTGATAACTT 57.647 30.769 0.00 0.00 0.00 2.66
236 237 8.806146 AGCAAACTTATGGATGTTGATAACTTT 58.194 29.630 0.00 0.00 0.00 2.66
237 238 9.423061 GCAAACTTATGGATGTTGATAACTTTT 57.577 29.630 0.00 0.00 0.00 2.27
244 245 7.945033 TGGATGTTGATAACTTTTTCTTTGC 57.055 32.000 0.00 0.00 0.00 3.68
245 246 7.495901 TGGATGTTGATAACTTTTTCTTTGCA 58.504 30.769 0.00 0.00 0.00 4.08
246 247 7.437862 TGGATGTTGATAACTTTTTCTTTGCAC 59.562 33.333 0.00 0.00 0.00 4.57
247 248 7.653311 GGATGTTGATAACTTTTTCTTTGCACT 59.347 33.333 0.00 0.00 0.00 4.40
248 249 8.947055 ATGTTGATAACTTTTTCTTTGCACTT 57.053 26.923 0.00 0.00 0.00 3.16
249 250 8.406172 TGTTGATAACTTTTTCTTTGCACTTC 57.594 30.769 0.00 0.00 0.00 3.01
250 251 8.250332 TGTTGATAACTTTTTCTTTGCACTTCT 58.750 29.630 0.00 0.00 0.00 2.85
251 252 9.087424 GTTGATAACTTTTTCTTTGCACTTCTT 57.913 29.630 0.00 0.00 0.00 2.52
252 253 9.651913 TTGATAACTTTTTCTTTGCACTTCTTT 57.348 25.926 0.00 0.00 0.00 2.52
253 254 9.086336 TGATAACTTTTTCTTTGCACTTCTTTG 57.914 29.630 0.00 0.00 0.00 2.77
254 255 9.301153 GATAACTTTTTCTTTGCACTTCTTTGA 57.699 29.630 0.00 0.00 0.00 2.69
255 256 7.961325 AACTTTTTCTTTGCACTTCTTTGAA 57.039 28.000 0.00 0.00 0.00 2.69
256 257 8.552083 AACTTTTTCTTTGCACTTCTTTGAAT 57.448 26.923 0.00 0.00 0.00 2.57
257 258 8.552083 ACTTTTTCTTTGCACTTCTTTGAATT 57.448 26.923 0.00 0.00 0.00 2.17
258 259 9.002600 ACTTTTTCTTTGCACTTCTTTGAATTT 57.997 25.926 0.00 0.00 0.00 1.82
259 260 9.481800 CTTTTTCTTTGCACTTCTTTGAATTTC 57.518 29.630 0.00 0.00 0.00 2.17
260 261 8.545229 TTTTCTTTGCACTTCTTTGAATTTCA 57.455 26.923 0.00 0.00 0.00 2.69
261 262 7.760131 TTCTTTGCACTTCTTTGAATTTCAG 57.240 32.000 0.00 0.00 0.00 3.02
262 263 7.099266 TCTTTGCACTTCTTTGAATTTCAGA 57.901 32.000 0.00 0.00 0.00 3.27
263 264 7.546358 TCTTTGCACTTCTTTGAATTTCAGAA 58.454 30.769 0.00 0.75 0.00 3.02
264 265 8.034215 TCTTTGCACTTCTTTGAATTTCAGAAA 58.966 29.630 0.00 0.00 0.00 2.52
265 266 7.760131 TTGCACTTCTTTGAATTTCAGAAAG 57.240 32.000 1.28 12.32 0.00 2.62
266 267 6.866480 TGCACTTCTTTGAATTTCAGAAAGT 58.134 32.000 13.19 13.19 29.98 2.66
267 268 7.995289 TGCACTTCTTTGAATTTCAGAAAGTA 58.005 30.769 16.27 6.47 29.36 2.24
268 269 8.465999 TGCACTTCTTTGAATTTCAGAAAGTAA 58.534 29.630 16.27 9.66 29.36 2.24
269 270 9.301153 GCACTTCTTTGAATTTCAGAAAGTAAA 57.699 29.630 16.27 0.00 29.36 2.01
293 294 8.931385 AAATATGCACTACATTTGAAATGTCC 57.069 30.769 25.09 13.36 40.38 4.02
294 295 4.418013 TGCACTACATTTGAAATGTCCG 57.582 40.909 25.09 19.08 33.76 4.79
295 296 3.171277 GCACTACATTTGAAATGTCCGC 58.829 45.455 25.09 20.65 33.76 5.54
296 297 3.119849 GCACTACATTTGAAATGTCCGCT 60.120 43.478 25.09 5.13 33.76 5.52
297 298 4.615912 GCACTACATTTGAAATGTCCGCTT 60.616 41.667 25.09 4.43 33.76 4.68
298 299 4.853196 CACTACATTTGAAATGTCCGCTTG 59.147 41.667 25.09 12.89 33.76 4.01
299 300 3.302365 ACATTTGAAATGTCCGCTTGG 57.698 42.857 17.19 0.00 0.00 3.61
300 301 2.029110 ACATTTGAAATGTCCGCTTGGG 60.029 45.455 17.19 0.00 37.02 4.12
301 302 1.988293 TTTGAAATGTCCGCTTGGGA 58.012 45.000 0.00 0.00 44.68 4.37
328 329 4.314440 GGGCTGCACACGGACTCA 62.314 66.667 0.50 0.00 0.00 3.41
329 330 3.044305 GGCTGCACACGGACTCAC 61.044 66.667 0.50 0.00 0.00 3.51
330 331 2.029666 GCTGCACACGGACTCACT 59.970 61.111 0.00 0.00 0.00 3.41
331 332 2.024319 GCTGCACACGGACTCACTC 61.024 63.158 0.00 0.00 0.00 3.51
332 333 1.730902 CTGCACACGGACTCACTCG 60.731 63.158 0.00 0.00 0.00 4.18
333 334 2.130073 CTGCACACGGACTCACTCGA 62.130 60.000 0.00 0.00 0.00 4.04
334 335 1.729838 GCACACGGACTCACTCGAC 60.730 63.158 0.00 0.00 0.00 4.20
335 336 1.440518 CACACGGACTCACTCGACG 60.441 63.158 0.00 0.00 0.00 5.12
336 337 2.176055 CACGGACTCACTCGACGG 59.824 66.667 0.00 0.00 0.00 4.79
337 338 2.281345 ACGGACTCACTCGACGGT 60.281 61.111 0.00 0.00 0.00 4.83
338 339 2.176055 CGGACTCACTCGACGGTG 59.824 66.667 9.38 9.38 38.44 4.94
339 340 2.126424 GGACTCACTCGACGGTGC 60.126 66.667 10.47 0.00 37.16 5.01
340 341 2.643272 GACTCACTCGACGGTGCA 59.357 61.111 10.47 0.00 37.16 4.57
341 342 1.007734 GACTCACTCGACGGTGCAA 60.008 57.895 10.47 0.00 37.16 4.08
342 343 1.004277 GACTCACTCGACGGTGCAAG 61.004 60.000 10.47 7.32 37.16 4.01
343 344 1.285950 CTCACTCGACGGTGCAAGA 59.714 57.895 10.47 0.00 37.16 3.02
344 345 0.318699 CTCACTCGACGGTGCAAGAA 60.319 55.000 10.47 0.00 37.16 2.52
345 346 0.317160 TCACTCGACGGTGCAAGAAT 59.683 50.000 10.47 0.00 37.16 2.40
346 347 1.148310 CACTCGACGGTGCAAGAATT 58.852 50.000 0.00 0.00 0.00 2.17
347 348 1.531149 CACTCGACGGTGCAAGAATTT 59.469 47.619 0.00 0.00 0.00 1.82
348 349 1.531149 ACTCGACGGTGCAAGAATTTG 59.469 47.619 0.00 0.00 37.36 2.32
349 350 1.531149 CTCGACGGTGCAAGAATTTGT 59.469 47.619 0.00 0.00 36.65 2.83
350 351 1.529438 TCGACGGTGCAAGAATTTGTC 59.471 47.619 0.00 0.00 36.65 3.18
351 352 1.399727 CGACGGTGCAAGAATTTGTCC 60.400 52.381 0.00 0.00 36.65 4.02
352 353 1.606668 GACGGTGCAAGAATTTGTCCA 59.393 47.619 0.00 0.00 36.65 4.02
353 354 1.336755 ACGGTGCAAGAATTTGTCCAC 59.663 47.619 0.00 0.00 36.65 4.02
354 355 1.662876 CGGTGCAAGAATTTGTCCACG 60.663 52.381 0.00 0.00 36.65 4.94
355 356 1.335872 GGTGCAAGAATTTGTCCACGG 60.336 52.381 0.00 0.00 36.65 4.94
356 357 1.606668 GTGCAAGAATTTGTCCACGGA 59.393 47.619 0.00 0.00 36.65 4.69
357 358 2.034053 GTGCAAGAATTTGTCCACGGAA 59.966 45.455 0.00 0.00 36.65 4.30
358 359 2.034053 TGCAAGAATTTGTCCACGGAAC 59.966 45.455 0.00 0.00 36.65 3.62
359 360 2.034053 GCAAGAATTTGTCCACGGAACA 59.966 45.455 0.00 0.00 36.65 3.18
360 361 3.853307 GCAAGAATTTGTCCACGGAACAG 60.853 47.826 0.00 0.00 36.65 3.16
361 362 3.208747 AGAATTTGTCCACGGAACAGT 57.791 42.857 0.00 0.00 0.00 3.55
362 363 4.345859 AGAATTTGTCCACGGAACAGTA 57.654 40.909 0.00 0.00 0.00 2.74
363 364 4.710324 AGAATTTGTCCACGGAACAGTAA 58.290 39.130 0.00 0.00 0.00 2.24
364 365 5.313712 AGAATTTGTCCACGGAACAGTAAT 58.686 37.500 0.00 0.00 0.00 1.89
365 366 6.469410 AGAATTTGTCCACGGAACAGTAATA 58.531 36.000 0.00 0.00 0.00 0.98
366 367 6.938030 AGAATTTGTCCACGGAACAGTAATAA 59.062 34.615 0.00 0.00 0.00 1.40
367 368 7.446013 AGAATTTGTCCACGGAACAGTAATAAA 59.554 33.333 0.00 0.00 0.00 1.40
368 369 6.548441 TTTGTCCACGGAACAGTAATAAAG 57.452 37.500 0.00 0.00 0.00 1.85
369 370 4.571919 TGTCCACGGAACAGTAATAAAGG 58.428 43.478 0.00 0.00 0.00 3.11
370 371 4.283978 TGTCCACGGAACAGTAATAAAGGA 59.716 41.667 0.00 0.00 0.00 3.36
371 372 5.221682 TGTCCACGGAACAGTAATAAAGGAA 60.222 40.000 0.00 0.00 0.00 3.36
372 373 5.121298 GTCCACGGAACAGTAATAAAGGAAC 59.879 44.000 0.00 0.00 0.00 3.62
373 374 4.092383 CCACGGAACAGTAATAAAGGAACG 59.908 45.833 0.00 0.00 0.00 3.95
374 375 4.092383 CACGGAACAGTAATAAAGGAACGG 59.908 45.833 0.00 0.00 0.00 4.44
375 376 4.021192 ACGGAACAGTAATAAAGGAACGGA 60.021 41.667 0.00 0.00 0.00 4.69
376 377 4.931002 CGGAACAGTAATAAAGGAACGGAA 59.069 41.667 0.00 0.00 0.00 4.30
377 378 5.409214 CGGAACAGTAATAAAGGAACGGAAA 59.591 40.000 0.00 0.00 0.00 3.13
378 379 6.605849 GGAACAGTAATAAAGGAACGGAAAC 58.394 40.000 0.00 0.00 0.00 2.78
392 393 2.288961 GGAAACGAATAGCTGACGGA 57.711 50.000 0.00 0.00 0.00 4.69
393 394 2.822764 GGAAACGAATAGCTGACGGAT 58.177 47.619 0.00 0.00 0.00 4.18
394 395 3.195661 GGAAACGAATAGCTGACGGATT 58.804 45.455 0.00 0.00 0.00 3.01
395 396 3.245519 GGAAACGAATAGCTGACGGATTC 59.754 47.826 0.00 8.46 0.00 2.52
396 397 2.510768 ACGAATAGCTGACGGATTCC 57.489 50.000 0.00 0.00 0.00 3.01
407 408 3.525619 CGGATTCCGTCTCCAACAA 57.474 52.632 17.08 0.00 42.73 2.83
408 409 1.359848 CGGATTCCGTCTCCAACAAG 58.640 55.000 17.08 0.00 42.73 3.16
409 410 1.067142 CGGATTCCGTCTCCAACAAGA 60.067 52.381 17.08 0.00 42.73 3.02
410 411 2.611971 CGGATTCCGTCTCCAACAAGAA 60.612 50.000 17.08 0.00 42.73 2.52
411 412 3.003480 GGATTCCGTCTCCAACAAGAAG 58.997 50.000 0.00 0.00 32.72 2.85
412 413 3.306780 GGATTCCGTCTCCAACAAGAAGA 60.307 47.826 0.00 0.00 32.72 2.87
413 414 4.508662 GATTCCGTCTCCAACAAGAAGAT 58.491 43.478 0.00 0.00 0.00 2.40
414 415 3.319137 TCCGTCTCCAACAAGAAGATG 57.681 47.619 0.00 0.00 0.00 2.90
415 416 2.028112 TCCGTCTCCAACAAGAAGATGG 60.028 50.000 3.89 3.89 41.31 3.51
416 417 1.734465 CGTCTCCAACAAGAAGATGGC 59.266 52.381 0.00 0.00 39.86 4.40
417 418 2.087646 GTCTCCAACAAGAAGATGGCC 58.912 52.381 0.00 0.00 39.86 5.36
418 419 1.704628 TCTCCAACAAGAAGATGGCCA 59.295 47.619 8.56 8.56 39.86 5.36
419 420 1.815003 CTCCAACAAGAAGATGGCCAC 59.185 52.381 8.16 1.58 39.86 5.01
420 421 1.144708 TCCAACAAGAAGATGGCCACA 59.855 47.619 8.16 0.00 39.86 4.17
421 422 2.173519 CCAACAAGAAGATGGCCACAT 58.826 47.619 8.16 0.00 40.85 3.21
429 430 3.639099 GATGGCCACATCGATCCAT 57.361 52.632 8.16 14.43 43.60 3.41
430 431 1.162698 GATGGCCACATCGATCCATG 58.837 55.000 18.30 7.33 43.60 3.66
431 432 0.475475 ATGGCCACATCGATCCATGT 59.525 50.000 8.16 0.00 37.87 3.21
432 433 1.127343 TGGCCACATCGATCCATGTA 58.873 50.000 0.00 0.00 35.10 2.29
433 434 1.699083 TGGCCACATCGATCCATGTAT 59.301 47.619 0.00 0.00 35.10 2.29
434 435 2.903135 TGGCCACATCGATCCATGTATA 59.097 45.455 0.00 0.00 35.10 1.47
435 436 3.519107 TGGCCACATCGATCCATGTATAT 59.481 43.478 0.00 0.00 35.10 0.86
436 437 4.714308 TGGCCACATCGATCCATGTATATA 59.286 41.667 0.00 0.00 35.10 0.86
437 438 5.188751 TGGCCACATCGATCCATGTATATAA 59.811 40.000 0.00 0.00 35.10 0.98
438 439 6.126796 TGGCCACATCGATCCATGTATATAAT 60.127 38.462 0.00 0.00 35.10 1.28
439 440 6.425114 GGCCACATCGATCCATGTATATAATC 59.575 42.308 5.59 0.00 35.10 1.75
440 441 6.144563 GCCACATCGATCCATGTATATAATCG 59.855 42.308 5.59 7.23 40.30 3.34
441 442 6.144563 CCACATCGATCCATGTATATAATCGC 59.855 42.308 5.59 0.00 39.16 4.58
442 443 6.920210 CACATCGATCCATGTATATAATCGCT 59.080 38.462 5.59 0.00 39.16 4.93
443 444 7.436376 CACATCGATCCATGTATATAATCGCTT 59.564 37.037 5.59 0.00 39.16 4.68
444 445 7.981789 ACATCGATCCATGTATATAATCGCTTT 59.018 33.333 3.92 0.00 39.16 3.51
445 446 7.987268 TCGATCCATGTATATAATCGCTTTC 57.013 36.000 8.31 0.00 39.16 2.62
446 447 6.978659 TCGATCCATGTATATAATCGCTTTCC 59.021 38.462 8.31 0.00 39.16 3.13
447 448 6.201044 CGATCCATGTATATAATCGCTTTCCC 59.799 42.308 1.88 0.00 33.69 3.97
448 449 6.367374 TCCATGTATATAATCGCTTTCCCA 57.633 37.500 0.00 0.00 0.00 4.37
449 450 6.406370 TCCATGTATATAATCGCTTTCCCAG 58.594 40.000 0.00 0.00 0.00 4.45
450 451 5.065218 CCATGTATATAATCGCTTTCCCAGC 59.935 44.000 0.00 0.00 46.31 4.85
458 459 3.431055 CTTTCCCAGCACACGCAA 58.569 55.556 0.00 0.00 42.27 4.85
459 460 1.283793 CTTTCCCAGCACACGCAAG 59.716 57.895 0.00 0.00 42.27 4.01
460 461 2.737932 CTTTCCCAGCACACGCAAGC 62.738 60.000 0.00 0.00 42.27 4.01
461 462 3.772853 TTCCCAGCACACGCAAGCT 62.773 57.895 0.00 0.00 42.94 3.74
462 463 3.730761 CCCAGCACACGCAAGCTC 61.731 66.667 0.00 0.00 39.50 4.09
463 464 4.081030 CCAGCACACGCAAGCTCG 62.081 66.667 0.00 0.00 39.50 5.03
464 465 3.341043 CAGCACACGCAAGCTCGT 61.341 61.111 0.00 0.00 44.35 4.18
465 466 2.021584 CAGCACACGCAAGCTCGTA 61.022 57.895 0.00 0.00 41.21 3.43
466 467 1.734477 AGCACACGCAAGCTCGTAG 60.734 57.895 0.00 0.00 41.21 3.51
467 468 2.022129 GCACACGCAAGCTCGTAGT 61.022 57.895 0.00 0.00 41.21 2.73
468 469 0.731514 GCACACGCAAGCTCGTAGTA 60.732 55.000 0.00 0.00 41.21 1.82
469 470 0.982673 CACACGCAAGCTCGTAGTAC 59.017 55.000 0.00 0.00 41.21 2.73
470 471 0.879765 ACACGCAAGCTCGTAGTACT 59.120 50.000 0.00 0.00 41.21 2.73
471 472 2.079158 ACACGCAAGCTCGTAGTACTA 58.921 47.619 0.00 0.00 41.21 1.82
472 473 2.681848 ACACGCAAGCTCGTAGTACTAT 59.318 45.455 5.75 0.00 41.21 2.12
473 474 3.036633 CACGCAAGCTCGTAGTACTATG 58.963 50.000 14.92 14.92 41.21 2.23
474 475 2.681848 ACGCAAGCTCGTAGTACTATGT 59.318 45.455 19.29 0.55 41.36 2.29
475 476 3.242673 ACGCAAGCTCGTAGTACTATGTC 60.243 47.826 19.29 13.19 41.36 3.06
476 477 3.002451 CGCAAGCTCGTAGTACTATGTCT 59.998 47.826 19.29 14.85 0.00 3.41
477 478 4.210746 CGCAAGCTCGTAGTACTATGTCTA 59.789 45.833 19.29 2.54 0.00 2.59
478 479 5.612925 CGCAAGCTCGTAGTACTATGTCTAG 60.613 48.000 19.29 11.97 0.00 2.43
479 480 5.681880 CAAGCTCGTAGTACTATGTCTAGC 58.318 45.833 19.46 19.46 0.00 3.42
480 481 4.958509 AGCTCGTAGTACTATGTCTAGCA 58.041 43.478 24.92 7.55 0.00 3.49
481 482 4.751098 AGCTCGTAGTACTATGTCTAGCAC 59.249 45.833 24.92 6.77 0.00 4.40
482 483 4.376210 GCTCGTAGTACTATGTCTAGCACG 60.376 50.000 21.06 13.47 0.00 5.34
483 484 3.492383 TCGTAGTACTATGTCTAGCACGC 59.508 47.826 19.29 0.00 0.00 5.34
484 485 3.246936 CGTAGTACTATGTCTAGCACGCA 59.753 47.826 13.15 0.00 0.00 5.24
485 486 3.694535 AGTACTATGTCTAGCACGCAC 57.305 47.619 0.00 0.00 0.00 5.34
486 487 2.031807 AGTACTATGTCTAGCACGCACG 59.968 50.000 0.00 0.00 0.00 5.34
487 488 1.092348 ACTATGTCTAGCACGCACGA 58.908 50.000 0.00 0.00 0.00 4.35
488 489 1.676529 ACTATGTCTAGCACGCACGAT 59.323 47.619 0.00 0.00 0.00 3.73
489 490 2.876550 ACTATGTCTAGCACGCACGATA 59.123 45.455 0.00 0.00 0.00 2.92
490 491 2.407521 ATGTCTAGCACGCACGATAG 57.592 50.000 0.00 0.00 46.19 2.08
518 519 4.383173 TGAGAATCATCAATCGTCCATGG 58.617 43.478 4.97 4.97 42.56 3.66
519 520 3.144506 AGAATCATCAATCGTCCATGGC 58.855 45.455 6.96 0.96 0.00 4.40
520 521 1.516161 ATCATCAATCGTCCATGGCG 58.484 50.000 18.73 18.73 0.00 5.69
521 522 0.177836 TCATCAATCGTCCATGGCGT 59.822 50.000 22.22 11.21 0.00 5.68
522 523 0.583438 CATCAATCGTCCATGGCGTC 59.417 55.000 22.22 9.19 0.00 5.19
523 524 0.875908 ATCAATCGTCCATGGCGTCG 60.876 55.000 22.22 18.37 0.00 5.12
524 525 1.809619 CAATCGTCCATGGCGTCGT 60.810 57.895 22.22 11.17 0.00 4.34
525 526 1.518572 AATCGTCCATGGCGTCGTC 60.519 57.895 22.22 0.00 0.00 4.20
526 527 1.945354 AATCGTCCATGGCGTCGTCT 61.945 55.000 22.22 10.34 0.00 4.18
527 528 1.945354 ATCGTCCATGGCGTCGTCTT 61.945 55.000 22.22 8.65 0.00 3.01
528 529 2.444624 CGTCCATGGCGTCGTCTTG 61.445 63.158 17.16 5.78 0.00 3.02
529 530 2.100631 GTCCATGGCGTCGTCTTGG 61.101 63.158 22.22 22.22 34.37 3.61
530 531 2.047274 CCATGGCGTCGTCTTGGT 60.047 61.111 20.49 0.00 29.47 3.67
531 532 2.100631 CCATGGCGTCGTCTTGGTC 61.101 63.158 20.49 0.00 29.47 4.02
532 533 2.100631 CATGGCGTCGTCTTGGTCC 61.101 63.158 4.89 0.00 0.00 4.46
533 534 3.310860 ATGGCGTCGTCTTGGTCCC 62.311 63.158 0.00 0.00 0.00 4.46
534 535 3.998672 GGCGTCGTCTTGGTCCCA 61.999 66.667 0.00 0.00 0.00 4.37
535 536 2.029964 GCGTCGTCTTGGTCCCAA 59.970 61.111 0.00 0.00 0.00 4.12
536 537 2.315386 GCGTCGTCTTGGTCCCAAC 61.315 63.158 0.00 0.00 0.00 3.77
537 538 1.366366 CGTCGTCTTGGTCCCAACT 59.634 57.895 0.00 0.00 0.00 3.16
538 539 0.666577 CGTCGTCTTGGTCCCAACTC 60.667 60.000 0.00 0.00 0.00 3.01
539 540 0.320508 GTCGTCTTGGTCCCAACTCC 60.321 60.000 0.00 0.00 0.00 3.85
540 541 1.003718 CGTCTTGGTCCCAACTCCC 60.004 63.158 0.00 0.00 0.00 4.30
541 542 1.764571 CGTCTTGGTCCCAACTCCCA 61.765 60.000 0.00 0.00 0.00 4.37
542 543 0.250770 GTCTTGGTCCCAACTCCCAC 60.251 60.000 0.00 0.00 0.00 4.61
543 544 1.302511 CTTGGTCCCAACTCCCACG 60.303 63.158 0.00 0.00 0.00 4.94
544 545 1.764571 CTTGGTCCCAACTCCCACGA 61.765 60.000 0.00 0.00 0.00 4.35
545 546 2.047213 TTGGTCCCAACTCCCACGAC 62.047 60.000 0.00 0.00 0.00 4.34
546 547 2.513259 GGTCCCAACTCCCACGACA 61.513 63.158 0.00 0.00 0.00 4.35
547 548 1.448497 GTCCCAACTCCCACGACAA 59.552 57.895 0.00 0.00 0.00 3.18
548 549 0.883370 GTCCCAACTCCCACGACAAC 60.883 60.000 0.00 0.00 0.00 3.32
549 550 1.052124 TCCCAACTCCCACGACAACT 61.052 55.000 0.00 0.00 0.00 3.16
550 551 0.602905 CCCAACTCCCACGACAACTC 60.603 60.000 0.00 0.00 0.00 3.01
551 552 0.393077 CCAACTCCCACGACAACTCT 59.607 55.000 0.00 0.00 0.00 3.24
552 553 1.202651 CCAACTCCCACGACAACTCTT 60.203 52.381 0.00 0.00 0.00 2.85
553 554 1.867233 CAACTCCCACGACAACTCTTG 59.133 52.381 0.00 0.00 0.00 3.02
554 555 0.393077 ACTCCCACGACAACTCTTGG 59.607 55.000 0.00 0.00 35.88 3.61
555 556 4.379174 CCCACGACAACTCTTGGG 57.621 61.111 0.00 0.00 46.72 4.12
556 557 4.379174 CCACGACAACTCTTGGGG 57.621 61.111 0.00 0.00 33.05 4.96
557 558 1.966451 CCACGACAACTCTTGGGGC 60.966 63.158 0.00 0.00 33.05 5.80
558 559 1.966451 CACGACAACTCTTGGGGCC 60.966 63.158 0.00 0.00 34.12 5.80
559 560 2.742372 CGACAACTCTTGGGGCCG 60.742 66.667 0.00 0.00 34.12 6.13
560 561 2.430367 GACAACTCTTGGGGCCGT 59.570 61.111 0.00 0.00 34.12 5.68
561 562 1.228154 GACAACTCTTGGGGCCGTT 60.228 57.895 0.00 0.00 34.12 4.44
562 563 1.228154 ACAACTCTTGGGGCCGTTC 60.228 57.895 0.00 0.00 34.12 3.95
563 564 1.228124 CAACTCTTGGGGCCGTTCA 60.228 57.895 0.00 0.00 0.00 3.18
564 565 1.228154 AACTCTTGGGGCCGTTCAC 60.228 57.895 0.00 0.00 0.00 3.18
565 566 2.359975 CTCTTGGGGCCGTTCACC 60.360 66.667 0.00 0.00 0.00 4.02
566 567 4.323477 TCTTGGGGCCGTTCACCG 62.323 66.667 0.00 0.00 0.00 4.94
574 575 3.499737 CCGTTCACCGCATGCCTC 61.500 66.667 13.15 0.00 34.38 4.70
575 576 3.499737 CGTTCACCGCATGCCTCC 61.500 66.667 13.15 0.00 0.00 4.30
576 577 3.134127 GTTCACCGCATGCCTCCC 61.134 66.667 13.15 0.00 0.00 4.30
577 578 3.329889 TTCACCGCATGCCTCCCT 61.330 61.111 13.15 0.00 0.00 4.20
578 579 2.905996 TTCACCGCATGCCTCCCTT 61.906 57.895 13.15 0.00 0.00 3.95
579 580 2.361610 CACCGCATGCCTCCCTTT 60.362 61.111 13.15 0.00 0.00 3.11
580 581 2.044946 ACCGCATGCCTCCCTTTC 60.045 61.111 13.15 0.00 0.00 2.62
581 582 2.273449 CCGCATGCCTCCCTTTCT 59.727 61.111 13.15 0.00 0.00 2.52
582 583 1.379044 CCGCATGCCTCCCTTTCTT 60.379 57.895 13.15 0.00 0.00 2.52
583 584 1.379642 CCGCATGCCTCCCTTTCTTC 61.380 60.000 13.15 0.00 0.00 2.87
584 585 1.379642 CGCATGCCTCCCTTTCTTCC 61.380 60.000 13.15 0.00 0.00 3.46
585 586 0.323725 GCATGCCTCCCTTTCTTCCA 60.324 55.000 6.36 0.00 0.00 3.53
586 587 1.760192 CATGCCTCCCTTTCTTCCAG 58.240 55.000 0.00 0.00 0.00 3.86
587 588 0.627986 ATGCCTCCCTTTCTTCCAGG 59.372 55.000 0.00 0.00 0.00 4.45
588 589 1.379176 GCCTCCCTTTCTTCCAGGC 60.379 63.158 0.00 0.00 42.87 4.85
589 590 2.078452 CCTCCCTTTCTTCCAGGCA 58.922 57.895 0.00 0.00 0.00 4.75
590 591 0.034670 CCTCCCTTTCTTCCAGGCAG 60.035 60.000 0.00 0.00 0.00 4.85
591 592 0.695347 CTCCCTTTCTTCCAGGCAGT 59.305 55.000 0.00 0.00 0.00 4.40
592 593 0.401738 TCCCTTTCTTCCAGGCAGTG 59.598 55.000 0.00 0.00 0.00 3.66
593 594 0.111253 CCCTTTCTTCCAGGCAGTGT 59.889 55.000 0.00 0.00 0.00 3.55
594 595 1.242076 CCTTTCTTCCAGGCAGTGTG 58.758 55.000 0.00 0.00 0.00 3.82
595 596 0.595095 CTTTCTTCCAGGCAGTGTGC 59.405 55.000 0.00 0.00 44.08 4.57
636 637 4.704833 CCACCACGGTCTGCAGGG 62.705 72.222 15.13 9.23 0.00 4.45
637 638 4.704833 CACCACGGTCTGCAGGGG 62.705 72.222 15.13 10.41 39.38 4.79
657 658 4.003788 CGAGGCCGGACAGTTGGT 62.004 66.667 11.69 0.00 0.00 3.67
658 659 2.430367 GAGGCCGGACAGTTGGTT 59.570 61.111 11.69 0.00 0.00 3.67
659 660 1.966451 GAGGCCGGACAGTTGGTTG 60.966 63.158 11.69 0.00 0.00 3.77
660 661 2.203294 GGCCGGACAGTTGGTTGT 60.203 61.111 5.05 0.00 0.00 3.32
661 662 2.258726 GGCCGGACAGTTGGTTGTC 61.259 63.158 5.05 0.00 45.28 3.18
667 668 1.145803 GACAGTTGGTTGTCCTACGC 58.854 55.000 0.00 0.00 42.61 4.42
668 669 0.599204 ACAGTTGGTTGTCCTACGCG 60.599 55.000 3.53 3.53 42.61 6.01
669 670 0.319211 CAGTTGGTTGTCCTACGCGA 60.319 55.000 15.93 0.00 42.61 5.87
670 671 0.390124 AGTTGGTTGTCCTACGCGAA 59.610 50.000 15.93 0.00 42.61 4.70
671 672 0.788391 GTTGGTTGTCCTACGCGAAG 59.212 55.000 15.93 0.00 30.86 3.79
672 673 0.320073 TTGGTTGTCCTACGCGAAGG 60.320 55.000 15.93 1.40 38.06 3.46
673 674 2.098831 GGTTGTCCTACGCGAAGGC 61.099 63.158 15.93 2.15 36.51 4.35
674 675 1.080025 GTTGTCCTACGCGAAGGCT 60.080 57.895 15.93 0.00 36.51 4.58
675 676 1.080093 TTGTCCTACGCGAAGGCTG 60.080 57.895 15.93 0.00 36.51 4.85
676 677 2.202756 GTCCTACGCGAAGGCTGG 60.203 66.667 15.93 5.28 36.51 4.85
677 678 2.678934 TCCTACGCGAAGGCTGGT 60.679 61.111 15.93 0.00 36.51 4.00
678 679 1.378911 TCCTACGCGAAGGCTGGTA 60.379 57.895 15.93 0.00 36.51 3.25
679 680 1.226888 CCTACGCGAAGGCTGGTAC 60.227 63.158 15.93 0.00 36.88 3.34
680 681 1.509463 CTACGCGAAGGCTGGTACA 59.491 57.895 15.93 0.00 36.88 2.90
681 682 0.102481 CTACGCGAAGGCTGGTACAT 59.898 55.000 15.93 0.00 38.20 2.29
682 683 1.335810 CTACGCGAAGGCTGGTACATA 59.664 52.381 15.93 0.00 38.20 2.29
683 684 0.533491 ACGCGAAGGCTGGTACATAA 59.467 50.000 15.93 0.00 38.20 1.90
684 685 0.928229 CGCGAAGGCTGGTACATAAC 59.072 55.000 0.00 0.00 38.20 1.89
695 696 3.565905 GGTACATAACCCTATCCGACG 57.434 52.381 0.00 0.00 43.16 5.12
696 697 3.149196 GGTACATAACCCTATCCGACGA 58.851 50.000 0.00 0.00 43.16 4.20
697 698 3.569701 GGTACATAACCCTATCCGACGAA 59.430 47.826 0.00 0.00 43.16 3.85
698 699 4.320788 GGTACATAACCCTATCCGACGAAG 60.321 50.000 0.00 0.00 43.16 3.79
699 700 6.722689 GGTACATAACCCTATCCGACGAAGT 61.723 48.000 0.00 0.00 44.32 3.01
700 701 7.462844 GGTACATAACCCTATCCGACGAAGTA 61.463 46.154 0.00 0.00 42.16 2.24
701 702 8.706547 GGTACATAACCCTATCCGACGAAGTAT 61.707 44.444 0.00 0.00 42.16 2.12
733 734 1.273438 ACTACCACGTTGGGGGTATCT 60.273 52.381 3.22 0.00 43.37 1.98
858 859 4.260702 CCGTTTTAACCGCTTAACTGACAA 60.261 41.667 0.00 0.00 0.00 3.18
1039 1051 3.070302 AGCTCTCGTCTTCCTTTGTTTCT 59.930 43.478 0.00 0.00 0.00 2.52
1040 1052 3.430556 GCTCTCGTCTTCCTTTGTTTCTC 59.569 47.826 0.00 0.00 0.00 2.87
1041 1053 4.621991 CTCTCGTCTTCCTTTGTTTCTCA 58.378 43.478 0.00 0.00 0.00 3.27
1042 1054 4.369182 TCTCGTCTTCCTTTGTTTCTCAC 58.631 43.478 0.00 0.00 0.00 3.51
1114 1126 2.722487 GAGACATCCGACGCCGAT 59.278 61.111 0.00 0.00 38.22 4.18
1142 1154 1.749634 AGTACATGGACGAGTACAGCC 59.250 52.381 1.41 0.00 42.26 4.85
1379 1398 2.149383 ACAGGCAGAGACCAGGCAA 61.149 57.895 0.00 0.00 0.00 4.52
1576 1706 1.875514 CTGGTGTGGTGTTCATCTGTG 59.124 52.381 0.00 0.00 0.00 3.66
1599 1729 8.999431 TGTGACTGAATTTTACTGGATTTAGTC 58.001 33.333 11.68 11.68 43.54 2.59
1892 2057 3.719268 TGACATGGATTACACAAGCCT 57.281 42.857 0.00 0.00 41.05 4.58
2016 2181 3.453717 TCCTGCAGAGTCAAGCTGATATT 59.546 43.478 17.39 0.00 35.39 1.28
2216 2384 6.387513 TGGTTGGTAAGTAAATATGAGGCCTA 59.612 38.462 4.42 0.00 0.00 3.93
2502 2693 2.498167 CTACCTGCAATATGGTCCTGC 58.502 52.381 0.00 0.00 37.74 4.85
2586 2777 3.328535 TCACATAGGAGGCACCATAGA 57.671 47.619 3.18 0.00 42.04 1.98
2805 3043 2.085320 TCCTCTTCCTCTTCGTCTTCG 58.915 52.381 0.00 0.00 38.55 3.79
2813 3051 2.032302 CCTCTTCGTCTTCGTCGATGAT 59.968 50.000 8.43 0.00 39.44 2.45
2814 3052 3.032498 CTCTTCGTCTTCGTCGATGATG 58.968 50.000 19.28 19.28 39.44 3.07
2815 3053 2.676342 TCTTCGTCTTCGTCGATGATGA 59.324 45.455 22.38 22.38 36.87 2.92
2827 3065 4.572909 GTCGATGATGATGATGATGGGAA 58.427 43.478 0.00 0.00 0.00 3.97
2836 3074 1.123928 GATGATGGGAAGAGGACGGT 58.876 55.000 0.00 0.00 0.00 4.83
2868 3106 2.202743 GCTGGCTGTGCGACGATA 60.203 61.111 0.00 0.00 0.00 2.92
2897 3138 2.365068 CGTCGTCTTCGTGCACCTG 61.365 63.158 12.15 0.00 38.33 4.00
3012 3253 4.913355 TCCTTCATTGCCCATAGGAGAATA 59.087 41.667 0.00 0.00 33.47 1.75
3053 3294 0.468226 CCTGGGTTTCCATAGCGCTA 59.532 55.000 21.30 21.30 43.11 4.26
3144 3385 1.604378 GCTGGTGTACCTCATGGCT 59.396 57.895 2.32 0.00 36.63 4.75
3145 3386 0.035056 GCTGGTGTACCTCATGGCTT 60.035 55.000 2.32 0.00 36.63 4.35
3208 3449 1.213537 CCAAGAAGCATGGCAACCG 59.786 57.895 0.00 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 8.526147 CCCTTTGTTCAATCTTCTTCATACAAT 58.474 33.333 0.00 0.00 0.00 2.71
75 76 7.723616 TCCCTTTGTTCAATCTTCTTCATACAA 59.276 33.333 0.00 0.00 0.00 2.41
76 77 7.230747 TCCCTTTGTTCAATCTTCTTCATACA 58.769 34.615 0.00 0.00 0.00 2.29
77 78 7.687941 TCCCTTTGTTCAATCTTCTTCATAC 57.312 36.000 0.00 0.00 0.00 2.39
78 79 7.340232 CCATCCCTTTGTTCAATCTTCTTCATA 59.660 37.037 0.00 0.00 0.00 2.15
79 80 6.154021 CCATCCCTTTGTTCAATCTTCTTCAT 59.846 38.462 0.00 0.00 0.00 2.57
80 81 5.477984 CCATCCCTTTGTTCAATCTTCTTCA 59.522 40.000 0.00 0.00 0.00 3.02
81 82 5.478332 ACCATCCCTTTGTTCAATCTTCTTC 59.522 40.000 0.00 0.00 0.00 2.87
82 83 5.244626 CACCATCCCTTTGTTCAATCTTCTT 59.755 40.000 0.00 0.00 0.00 2.52
83 84 4.768968 CACCATCCCTTTGTTCAATCTTCT 59.231 41.667 0.00 0.00 0.00 2.85
84 85 4.766891 TCACCATCCCTTTGTTCAATCTTC 59.233 41.667 0.00 0.00 0.00 2.87
85 86 4.739793 TCACCATCCCTTTGTTCAATCTT 58.260 39.130 0.00 0.00 0.00 2.40
86 87 4.043310 TCTCACCATCCCTTTGTTCAATCT 59.957 41.667 0.00 0.00 0.00 2.40
87 88 4.335416 TCTCACCATCCCTTTGTTCAATC 58.665 43.478 0.00 0.00 0.00 2.67
88 89 4.387026 TCTCACCATCCCTTTGTTCAAT 57.613 40.909 0.00 0.00 0.00 2.57
89 90 3.874383 TCTCACCATCCCTTTGTTCAA 57.126 42.857 0.00 0.00 0.00 2.69
90 91 3.874383 TTCTCACCATCCCTTTGTTCA 57.126 42.857 0.00 0.00 0.00 3.18
91 92 5.529581 TTTTTCTCACCATCCCTTTGTTC 57.470 39.130 0.00 0.00 0.00 3.18
128 129 9.257651 CGGGACAATATCTACTACTTAAAAAGG 57.742 37.037 0.00 0.00 0.00 3.11
129 130 8.762426 GCGGGACAATATCTACTACTTAAAAAG 58.238 37.037 0.00 0.00 0.00 2.27
130 131 7.712205 GGCGGGACAATATCTACTACTTAAAAA 59.288 37.037 0.00 0.00 0.00 1.94
131 132 7.147689 TGGCGGGACAATATCTACTACTTAAAA 60.148 37.037 0.00 0.00 0.00 1.52
132 133 6.324512 TGGCGGGACAATATCTACTACTTAAA 59.675 38.462 0.00 0.00 0.00 1.52
133 134 5.834742 TGGCGGGACAATATCTACTACTTAA 59.165 40.000 0.00 0.00 0.00 1.85
134 135 5.387788 TGGCGGGACAATATCTACTACTTA 58.612 41.667 0.00 0.00 0.00 2.24
135 136 4.220724 TGGCGGGACAATATCTACTACTT 58.779 43.478 0.00 0.00 0.00 2.24
136 137 3.840991 TGGCGGGACAATATCTACTACT 58.159 45.455 0.00 0.00 0.00 2.57
137 138 4.038883 ACTTGGCGGGACAATATCTACTAC 59.961 45.833 0.00 0.00 0.00 2.73
138 139 4.220724 ACTTGGCGGGACAATATCTACTA 58.779 43.478 0.00 0.00 0.00 1.82
139 140 3.039011 ACTTGGCGGGACAATATCTACT 58.961 45.455 0.00 0.00 0.00 2.57
140 141 3.470645 ACTTGGCGGGACAATATCTAC 57.529 47.619 0.00 0.00 0.00 2.59
141 142 3.005050 CGTACTTGGCGGGACAATATCTA 59.995 47.826 0.00 0.00 0.00 1.98
142 143 2.223971 CGTACTTGGCGGGACAATATCT 60.224 50.000 0.00 0.00 0.00 1.98
143 144 2.132762 CGTACTTGGCGGGACAATATC 58.867 52.381 0.00 0.00 0.00 1.63
144 145 1.202604 CCGTACTTGGCGGGACAATAT 60.203 52.381 0.00 0.00 44.98 1.28
145 146 0.176219 CCGTACTTGGCGGGACAATA 59.824 55.000 0.00 0.00 44.98 1.90
146 147 1.078708 CCGTACTTGGCGGGACAAT 60.079 57.895 0.00 0.00 44.98 2.71
147 148 2.344500 CCGTACTTGGCGGGACAA 59.656 61.111 0.00 0.00 44.98 3.18
148 149 4.382320 GCCGTACTTGGCGGGACA 62.382 66.667 5.88 0.00 46.75 4.02
155 156 4.113354 GTCTTATCTCTTGCCGTACTTGG 58.887 47.826 0.00 0.00 0.00 3.61
156 157 4.113354 GGTCTTATCTCTTGCCGTACTTG 58.887 47.826 0.00 0.00 0.00 3.16
157 158 3.767673 TGGTCTTATCTCTTGCCGTACTT 59.232 43.478 0.00 0.00 0.00 2.24
158 159 3.362706 TGGTCTTATCTCTTGCCGTACT 58.637 45.455 0.00 0.00 0.00 2.73
159 160 3.795623 TGGTCTTATCTCTTGCCGTAC 57.204 47.619 0.00 0.00 0.00 3.67
160 161 4.038042 CAGATGGTCTTATCTCTTGCCGTA 59.962 45.833 0.00 0.00 35.28 4.02
161 162 3.034635 AGATGGTCTTATCTCTTGCCGT 58.965 45.455 0.00 0.00 31.97 5.68
162 163 3.388308 CAGATGGTCTTATCTCTTGCCG 58.612 50.000 0.00 0.00 35.28 5.69
163 164 3.137533 GCAGATGGTCTTATCTCTTGCC 58.862 50.000 0.00 0.00 35.28 4.52
164 165 4.070630 AGCAGATGGTCTTATCTCTTGC 57.929 45.455 0.00 0.00 35.28 4.01
165 166 6.265196 AGACTAGCAGATGGTCTTATCTCTTG 59.735 42.308 0.00 0.00 46.79 3.02
166 167 6.372931 AGACTAGCAGATGGTCTTATCTCTT 58.627 40.000 0.00 0.00 46.79 2.85
167 168 5.952387 AGACTAGCAGATGGTCTTATCTCT 58.048 41.667 0.00 0.00 46.79 3.10
168 169 6.940298 AGTAGACTAGCAGATGGTCTTATCTC 59.060 42.308 10.25 0.00 46.79 2.75
169 170 6.714810 CAGTAGACTAGCAGATGGTCTTATCT 59.285 42.308 10.25 4.56 46.79 1.98
170 171 6.569610 GCAGTAGACTAGCAGATGGTCTTATC 60.570 46.154 10.25 2.44 46.79 1.75
171 172 5.242838 GCAGTAGACTAGCAGATGGTCTTAT 59.757 44.000 10.25 0.00 46.79 1.73
172 173 4.580995 GCAGTAGACTAGCAGATGGTCTTA 59.419 45.833 10.25 0.00 46.79 2.10
173 174 3.383185 GCAGTAGACTAGCAGATGGTCTT 59.617 47.826 10.25 0.00 46.79 3.01
175 176 2.690497 TGCAGTAGACTAGCAGATGGTC 59.310 50.000 0.00 0.00 39.61 4.02
176 177 2.428890 GTGCAGTAGACTAGCAGATGGT 59.571 50.000 6.93 0.00 39.21 3.55
177 178 2.428530 TGTGCAGTAGACTAGCAGATGG 59.571 50.000 6.93 0.00 39.21 3.51
178 179 3.790152 TGTGCAGTAGACTAGCAGATG 57.210 47.619 6.93 0.00 39.21 2.90
179 180 6.662865 ATATTGTGCAGTAGACTAGCAGAT 57.337 37.500 6.93 7.22 39.21 2.90
180 181 7.582667 TTATATTGTGCAGTAGACTAGCAGA 57.417 36.000 6.93 4.25 39.21 4.26
181 182 8.084684 TCATTATATTGTGCAGTAGACTAGCAG 58.915 37.037 6.93 0.00 39.21 4.24
182 183 7.951591 TCATTATATTGTGCAGTAGACTAGCA 58.048 34.615 0.00 3.62 35.63 3.49
183 184 8.818141 TTCATTATATTGTGCAGTAGACTAGC 57.182 34.615 0.00 0.00 0.00 3.42
186 187 9.429359 GCTATTCATTATATTGTGCAGTAGACT 57.571 33.333 0.00 0.00 0.00 3.24
187 188 9.208022 TGCTATTCATTATATTGTGCAGTAGAC 57.792 33.333 0.00 0.00 0.00 2.59
188 189 9.777297 TTGCTATTCATTATATTGTGCAGTAGA 57.223 29.630 0.00 0.00 0.00 2.59
191 192 8.906867 AGTTTGCTATTCATTATATTGTGCAGT 58.093 29.630 0.00 0.00 0.00 4.40
192 193 9.740239 AAGTTTGCTATTCATTATATTGTGCAG 57.260 29.630 0.00 0.00 0.00 4.41
203 204 8.970020 TCAACATCCATAAGTTTGCTATTCATT 58.030 29.630 0.00 0.00 0.00 2.57
204 205 8.523915 TCAACATCCATAAGTTTGCTATTCAT 57.476 30.769 0.00 0.00 0.00 2.57
205 206 7.936496 TCAACATCCATAAGTTTGCTATTCA 57.064 32.000 0.00 0.00 0.00 2.57
208 209 9.632638 AGTTATCAACATCCATAAGTTTGCTAT 57.367 29.630 0.00 0.00 0.00 2.97
209 210 9.461312 AAGTTATCAACATCCATAAGTTTGCTA 57.539 29.630 0.00 0.00 27.92 3.49
210 211 7.944729 AGTTATCAACATCCATAAGTTTGCT 57.055 32.000 0.00 0.00 0.00 3.91
211 212 8.986477 AAAGTTATCAACATCCATAAGTTTGC 57.014 30.769 0.00 0.00 37.01 3.68
218 219 9.638239 GCAAAGAAAAAGTTATCAACATCCATA 57.362 29.630 0.00 0.00 0.00 2.74
219 220 8.149647 TGCAAAGAAAAAGTTATCAACATCCAT 58.850 29.630 0.00 0.00 0.00 3.41
220 221 7.437862 GTGCAAAGAAAAAGTTATCAACATCCA 59.562 33.333 0.00 0.00 0.00 3.41
221 222 7.653311 AGTGCAAAGAAAAAGTTATCAACATCC 59.347 33.333 0.00 0.00 0.00 3.51
222 223 8.579682 AGTGCAAAGAAAAAGTTATCAACATC 57.420 30.769 0.00 0.00 0.00 3.06
223 224 8.947055 AAGTGCAAAGAAAAAGTTATCAACAT 57.053 26.923 0.00 0.00 0.00 2.71
224 225 8.250332 AGAAGTGCAAAGAAAAAGTTATCAACA 58.750 29.630 0.00 0.00 0.00 3.33
225 226 8.634475 AGAAGTGCAAAGAAAAAGTTATCAAC 57.366 30.769 0.00 0.00 0.00 3.18
226 227 9.651913 AAAGAAGTGCAAAGAAAAAGTTATCAA 57.348 25.926 0.00 0.00 0.00 2.57
227 228 9.086336 CAAAGAAGTGCAAAGAAAAAGTTATCA 57.914 29.630 0.00 0.00 0.00 2.15
228 229 9.301153 TCAAAGAAGTGCAAAGAAAAAGTTATC 57.699 29.630 0.00 0.00 0.00 1.75
229 230 9.651913 TTCAAAGAAGTGCAAAGAAAAAGTTAT 57.348 25.926 0.00 0.00 0.00 1.89
230 231 9.651913 ATTCAAAGAAGTGCAAAGAAAAAGTTA 57.348 25.926 0.00 0.00 0.00 2.24
231 232 7.961325 TTCAAAGAAGTGCAAAGAAAAAGTT 57.039 28.000 0.00 0.00 0.00 2.66
232 233 8.552083 AATTCAAAGAAGTGCAAAGAAAAAGT 57.448 26.923 0.00 0.00 0.00 2.66
233 234 9.481800 GAAATTCAAAGAAGTGCAAAGAAAAAG 57.518 29.630 0.00 0.00 0.00 2.27
234 235 8.997323 TGAAATTCAAAGAAGTGCAAAGAAAAA 58.003 25.926 0.00 0.00 0.00 1.94
235 236 8.545229 TGAAATTCAAAGAAGTGCAAAGAAAA 57.455 26.923 0.00 0.00 0.00 2.29
236 237 8.034215 TCTGAAATTCAAAGAAGTGCAAAGAAA 58.966 29.630 0.00 0.00 0.00 2.52
237 238 7.546358 TCTGAAATTCAAAGAAGTGCAAAGAA 58.454 30.769 0.00 0.00 0.00 2.52
238 239 7.099266 TCTGAAATTCAAAGAAGTGCAAAGA 57.901 32.000 0.00 0.00 0.00 2.52
239 240 7.760131 TTCTGAAATTCAAAGAAGTGCAAAG 57.240 32.000 0.00 0.00 0.00 2.77
240 241 7.818930 ACTTTCTGAAATTCAAAGAAGTGCAAA 59.181 29.630 12.74 0.00 31.89 3.68
241 242 7.322664 ACTTTCTGAAATTCAAAGAAGTGCAA 58.677 30.769 12.74 0.00 31.89 4.08
242 243 6.866480 ACTTTCTGAAATTCAAAGAAGTGCA 58.134 32.000 12.74 0.00 31.89 4.57
243 244 8.856490 TTACTTTCTGAAATTCAAAGAAGTGC 57.144 30.769 19.48 0.00 31.89 4.40
267 268 9.369904 GGACATTTCAAATGTAGTGCATATTTT 57.630 29.630 15.91 0.00 36.67 1.82
268 269 7.701924 CGGACATTTCAAATGTAGTGCATATTT 59.298 33.333 15.91 0.00 36.67 1.40
269 270 7.195646 CGGACATTTCAAATGTAGTGCATATT 58.804 34.615 15.91 0.00 36.67 1.28
270 271 6.728200 CGGACATTTCAAATGTAGTGCATAT 58.272 36.000 15.91 0.00 36.67 1.78
271 272 5.448496 GCGGACATTTCAAATGTAGTGCATA 60.448 40.000 15.91 0.00 36.67 3.14
272 273 4.675146 GCGGACATTTCAAATGTAGTGCAT 60.675 41.667 15.91 0.00 40.03 3.96
273 274 3.365868 GCGGACATTTCAAATGTAGTGCA 60.366 43.478 15.91 0.00 31.52 4.57
274 275 3.119849 AGCGGACATTTCAAATGTAGTGC 60.120 43.478 15.91 17.83 31.52 4.40
275 276 4.685169 AGCGGACATTTCAAATGTAGTG 57.315 40.909 15.91 9.61 31.52 2.74
276 277 4.082787 CCAAGCGGACATTTCAAATGTAGT 60.083 41.667 15.91 0.00 31.52 2.73
277 278 4.414852 CCAAGCGGACATTTCAAATGTAG 58.585 43.478 15.91 13.51 31.52 2.74
278 279 3.192422 CCCAAGCGGACATTTCAAATGTA 59.808 43.478 15.91 0.00 31.52 2.29
279 280 2.029110 CCCAAGCGGACATTTCAAATGT 60.029 45.455 15.88 15.88 34.52 2.71
280 281 2.230992 TCCCAAGCGGACATTTCAAATG 59.769 45.455 8.67 8.67 34.86 2.32
281 282 2.524306 TCCCAAGCGGACATTTCAAAT 58.476 42.857 0.00 0.00 34.86 2.32
282 283 1.988293 TCCCAAGCGGACATTTCAAA 58.012 45.000 0.00 0.00 34.86 2.69
283 284 3.735704 TCCCAAGCGGACATTTCAA 57.264 47.368 0.00 0.00 34.86 2.69
311 312 4.314440 TGAGTCCGTGTGCAGCCC 62.314 66.667 0.00 0.00 0.00 5.19
312 313 3.044305 GTGAGTCCGTGTGCAGCC 61.044 66.667 0.00 0.00 0.00 4.85
313 314 2.024319 GAGTGAGTCCGTGTGCAGC 61.024 63.158 0.00 0.00 0.00 5.25
314 315 1.730902 CGAGTGAGTCCGTGTGCAG 60.731 63.158 0.00 0.00 0.00 4.41
315 316 2.190841 TCGAGTGAGTCCGTGTGCA 61.191 57.895 0.00 0.00 0.00 4.57
316 317 1.729838 GTCGAGTGAGTCCGTGTGC 60.730 63.158 0.00 0.00 0.00 4.57
317 318 1.440518 CGTCGAGTGAGTCCGTGTG 60.441 63.158 0.00 0.00 0.00 3.82
318 319 2.614446 CCGTCGAGTGAGTCCGTGT 61.614 63.158 0.00 0.00 0.00 4.49
319 320 2.176055 CCGTCGAGTGAGTCCGTG 59.824 66.667 0.00 0.00 0.00 4.94
320 321 2.281345 ACCGTCGAGTGAGTCCGT 60.281 61.111 0.00 0.00 0.00 4.69
321 322 2.176055 CACCGTCGAGTGAGTCCG 59.824 66.667 7.78 0.00 40.34 4.79
322 323 2.126424 GCACCGTCGAGTGAGTCC 60.126 66.667 15.29 0.00 40.34 3.85
323 324 1.004277 CTTGCACCGTCGAGTGAGTC 61.004 60.000 15.29 0.00 40.34 3.36
324 325 1.007271 CTTGCACCGTCGAGTGAGT 60.007 57.895 15.29 0.00 40.34 3.41
325 326 0.318699 TTCTTGCACCGTCGAGTGAG 60.319 55.000 15.29 6.98 40.34 3.51
326 327 0.317160 ATTCTTGCACCGTCGAGTGA 59.683 50.000 15.29 1.74 40.34 3.41
327 328 1.148310 AATTCTTGCACCGTCGAGTG 58.852 50.000 8.85 8.85 40.88 3.51
328 329 1.531149 CAAATTCTTGCACCGTCGAGT 59.469 47.619 0.00 0.00 0.00 4.18
329 330 1.531149 ACAAATTCTTGCACCGTCGAG 59.469 47.619 0.00 0.00 35.84 4.04
330 331 1.529438 GACAAATTCTTGCACCGTCGA 59.471 47.619 0.00 0.00 35.84 4.20
331 332 1.399727 GGACAAATTCTTGCACCGTCG 60.400 52.381 0.00 0.00 35.84 5.12
332 333 1.606668 TGGACAAATTCTTGCACCGTC 59.393 47.619 0.00 0.00 36.00 4.79
333 334 1.336755 GTGGACAAATTCTTGCACCGT 59.663 47.619 0.00 0.00 36.00 4.83
334 335 1.662876 CGTGGACAAATTCTTGCACCG 60.663 52.381 5.62 0.00 36.00 4.94
335 336 1.335872 CCGTGGACAAATTCTTGCACC 60.336 52.381 5.62 0.00 35.84 5.01
336 337 1.606668 TCCGTGGACAAATTCTTGCAC 59.393 47.619 0.00 1.95 35.84 4.57
337 338 1.974265 TCCGTGGACAAATTCTTGCA 58.026 45.000 0.00 0.00 35.84 4.08
338 339 2.034053 TGTTCCGTGGACAAATTCTTGC 59.966 45.455 0.00 0.00 35.84 4.01
339 340 3.315191 ACTGTTCCGTGGACAAATTCTTG 59.685 43.478 0.00 0.00 38.61 3.02
340 341 3.551846 ACTGTTCCGTGGACAAATTCTT 58.448 40.909 0.00 0.00 0.00 2.52
341 342 3.208747 ACTGTTCCGTGGACAAATTCT 57.791 42.857 0.00 0.00 0.00 2.40
342 343 5.622770 ATTACTGTTCCGTGGACAAATTC 57.377 39.130 0.00 0.00 0.00 2.17
343 344 7.308951 CCTTTATTACTGTTCCGTGGACAAATT 60.309 37.037 0.00 0.00 0.00 1.82
344 345 6.150474 CCTTTATTACTGTTCCGTGGACAAAT 59.850 38.462 0.00 0.00 0.00 2.32
345 346 5.470777 CCTTTATTACTGTTCCGTGGACAAA 59.529 40.000 0.00 0.00 0.00 2.83
346 347 4.998672 CCTTTATTACTGTTCCGTGGACAA 59.001 41.667 0.00 0.00 0.00 3.18
347 348 4.283978 TCCTTTATTACTGTTCCGTGGACA 59.716 41.667 0.00 0.00 0.00 4.02
348 349 4.824289 TCCTTTATTACTGTTCCGTGGAC 58.176 43.478 0.00 0.00 0.00 4.02
349 350 5.240121 GTTCCTTTATTACTGTTCCGTGGA 58.760 41.667 0.00 0.00 0.00 4.02
350 351 4.092383 CGTTCCTTTATTACTGTTCCGTGG 59.908 45.833 0.00 0.00 0.00 4.94
351 352 4.092383 CCGTTCCTTTATTACTGTTCCGTG 59.908 45.833 0.00 0.00 0.00 4.94
352 353 4.021192 TCCGTTCCTTTATTACTGTTCCGT 60.021 41.667 0.00 0.00 0.00 4.69
353 354 4.497300 TCCGTTCCTTTATTACTGTTCCG 58.503 43.478 0.00 0.00 0.00 4.30
354 355 6.605849 GTTTCCGTTCCTTTATTACTGTTCC 58.394 40.000 0.00 0.00 0.00 3.62
355 356 6.146021 TCGTTTCCGTTCCTTTATTACTGTTC 59.854 38.462 0.00 0.00 35.01 3.18
356 357 5.990996 TCGTTTCCGTTCCTTTATTACTGTT 59.009 36.000 0.00 0.00 35.01 3.16
357 358 5.540911 TCGTTTCCGTTCCTTTATTACTGT 58.459 37.500 0.00 0.00 35.01 3.55
358 359 6.470557 TTCGTTTCCGTTCCTTTATTACTG 57.529 37.500 0.00 0.00 35.01 2.74
359 360 7.010830 GCTATTCGTTTCCGTTCCTTTATTACT 59.989 37.037 0.00 0.00 35.01 2.24
360 361 7.010830 AGCTATTCGTTTCCGTTCCTTTATTAC 59.989 37.037 0.00 0.00 35.01 1.89
361 362 7.010738 CAGCTATTCGTTTCCGTTCCTTTATTA 59.989 37.037 0.00 0.00 35.01 0.98
362 363 5.878669 AGCTATTCGTTTCCGTTCCTTTATT 59.121 36.000 0.00 0.00 35.01 1.40
363 364 5.293569 CAGCTATTCGTTTCCGTTCCTTTAT 59.706 40.000 0.00 0.00 35.01 1.40
364 365 4.628333 CAGCTATTCGTTTCCGTTCCTTTA 59.372 41.667 0.00 0.00 35.01 1.85
365 366 3.435671 CAGCTATTCGTTTCCGTTCCTTT 59.564 43.478 0.00 0.00 35.01 3.11
366 367 3.000727 CAGCTATTCGTTTCCGTTCCTT 58.999 45.455 0.00 0.00 35.01 3.36
367 368 2.232941 TCAGCTATTCGTTTCCGTTCCT 59.767 45.455 0.00 0.00 35.01 3.36
368 369 2.347755 GTCAGCTATTCGTTTCCGTTCC 59.652 50.000 0.00 0.00 35.01 3.62
369 370 2.027688 CGTCAGCTATTCGTTTCCGTTC 59.972 50.000 0.00 0.00 35.01 3.95
370 371 1.990563 CGTCAGCTATTCGTTTCCGTT 59.009 47.619 0.00 0.00 35.01 4.44
371 372 1.625616 CGTCAGCTATTCGTTTCCGT 58.374 50.000 0.00 0.00 35.01 4.69
372 373 0.921347 CCGTCAGCTATTCGTTTCCG 59.079 55.000 0.00 0.00 0.00 4.30
373 374 2.288961 TCCGTCAGCTATTCGTTTCC 57.711 50.000 0.00 0.00 0.00 3.13
374 375 3.245519 GGAATCCGTCAGCTATTCGTTTC 59.754 47.826 0.00 0.00 31.70 2.78
375 376 3.195661 GGAATCCGTCAGCTATTCGTTT 58.804 45.455 0.00 0.00 31.70 3.60
376 377 2.798499 CGGAATCCGTCAGCTATTCGTT 60.798 50.000 14.46 0.00 42.73 3.85
377 378 1.269102 CGGAATCCGTCAGCTATTCGT 60.269 52.381 14.46 0.00 42.73 3.85
378 379 1.409412 CGGAATCCGTCAGCTATTCG 58.591 55.000 14.46 0.00 42.73 3.34
390 391 2.762535 TCTTGTTGGAGACGGAATCC 57.237 50.000 0.00 0.00 37.35 3.01
391 392 3.926616 TCTTCTTGTTGGAGACGGAATC 58.073 45.455 0.00 0.00 0.00 2.52
392 393 4.256920 CATCTTCTTGTTGGAGACGGAAT 58.743 43.478 0.00 0.00 0.00 3.01
393 394 3.557054 CCATCTTCTTGTTGGAGACGGAA 60.557 47.826 0.00 0.00 37.65 4.30
394 395 2.028112 CCATCTTCTTGTTGGAGACGGA 60.028 50.000 0.00 0.00 37.65 4.69
395 396 2.350522 CCATCTTCTTGTTGGAGACGG 58.649 52.381 0.00 0.00 37.65 4.79
396 397 1.734465 GCCATCTTCTTGTTGGAGACG 59.266 52.381 0.00 0.00 37.65 4.18
397 398 2.087646 GGCCATCTTCTTGTTGGAGAC 58.912 52.381 0.00 0.00 37.65 3.36
398 399 1.704628 TGGCCATCTTCTTGTTGGAGA 59.295 47.619 0.00 0.00 37.65 3.71
399 400 1.815003 GTGGCCATCTTCTTGTTGGAG 59.185 52.381 9.72 0.00 37.65 3.86
400 401 1.144708 TGTGGCCATCTTCTTGTTGGA 59.855 47.619 9.72 0.00 37.65 3.53
401 402 1.619654 TGTGGCCATCTTCTTGTTGG 58.380 50.000 9.72 0.00 38.30 3.77
402 403 2.159476 CGATGTGGCCATCTTCTTGTTG 60.159 50.000 9.72 0.00 44.45 3.33
403 404 2.086869 CGATGTGGCCATCTTCTTGTT 58.913 47.619 9.72 0.00 44.45 2.83
404 405 1.278985 TCGATGTGGCCATCTTCTTGT 59.721 47.619 9.72 0.00 44.45 3.16
405 406 2.028420 TCGATGTGGCCATCTTCTTG 57.972 50.000 9.72 0.00 44.45 3.02
406 407 2.486191 GGATCGATGTGGCCATCTTCTT 60.486 50.000 9.72 0.00 44.45 2.52
407 408 1.071385 GGATCGATGTGGCCATCTTCT 59.929 52.381 9.72 0.00 44.45 2.85
408 409 1.202687 TGGATCGATGTGGCCATCTTC 60.203 52.381 9.72 9.68 44.45 2.87
409 410 0.839277 TGGATCGATGTGGCCATCTT 59.161 50.000 9.72 0.53 44.45 2.40
410 411 1.062364 ATGGATCGATGTGGCCATCT 58.938 50.000 9.72 0.00 44.45 2.90
411 412 1.162698 CATGGATCGATGTGGCCATC 58.837 55.000 9.72 1.45 43.41 3.51
412 413 0.475475 ACATGGATCGATGTGGCCAT 59.525 50.000 20.99 6.59 41.61 4.40
413 414 1.127343 TACATGGATCGATGTGGCCA 58.873 50.000 27.73 0.00 37.16 5.36
414 415 2.479566 ATACATGGATCGATGTGGCC 57.520 50.000 27.73 0.00 37.16 5.36
415 416 6.144563 CGATTATATACATGGATCGATGTGGC 59.855 42.308 27.73 11.37 41.37 5.01
416 417 6.144563 GCGATTATATACATGGATCGATGTGG 59.855 42.308 27.73 11.09 41.37 4.17
417 418 6.920210 AGCGATTATATACATGGATCGATGTG 59.080 38.462 27.73 13.01 41.37 3.21
418 419 7.043961 AGCGATTATATACATGGATCGATGT 57.956 36.000 24.22 24.22 41.37 3.06
419 420 7.936950 AAGCGATTATATACATGGATCGATG 57.063 36.000 15.40 15.40 41.37 3.84
420 421 7.653713 GGAAAGCGATTATATACATGGATCGAT 59.346 37.037 14.86 0.00 41.37 3.59
421 422 6.978659 GGAAAGCGATTATATACATGGATCGA 59.021 38.462 14.86 0.00 41.37 3.59
422 423 6.201044 GGGAAAGCGATTATATACATGGATCG 59.799 42.308 0.00 8.69 41.67 3.69
423 424 7.047891 TGGGAAAGCGATTATATACATGGATC 58.952 38.462 0.00 0.00 0.00 3.36
424 425 6.957631 TGGGAAAGCGATTATATACATGGAT 58.042 36.000 0.00 0.00 0.00 3.41
425 426 6.367374 TGGGAAAGCGATTATATACATGGA 57.633 37.500 0.00 0.00 0.00 3.41
426 427 5.065218 GCTGGGAAAGCGATTATATACATGG 59.935 44.000 0.00 0.00 43.45 3.66
427 428 6.111768 GCTGGGAAAGCGATTATATACATG 57.888 41.667 0.00 0.00 43.45 3.21
441 442 1.283793 CTTGCGTGTGCTGGGAAAG 59.716 57.895 0.00 0.00 43.34 2.62
442 443 2.844451 GCTTGCGTGTGCTGGGAAA 61.844 57.895 0.00 0.00 43.34 3.13
443 444 3.286751 GCTTGCGTGTGCTGGGAA 61.287 61.111 0.00 0.00 43.34 3.97
444 445 4.254709 AGCTTGCGTGTGCTGGGA 62.255 61.111 0.00 0.00 43.34 4.37
445 446 3.730761 GAGCTTGCGTGTGCTGGG 61.731 66.667 3.19 0.00 43.34 4.45
446 447 4.081030 CGAGCTTGCGTGTGCTGG 62.081 66.667 3.19 0.00 43.34 4.85
447 448 1.949015 CTACGAGCTTGCGTGTGCTG 61.949 60.000 10.46 0.25 45.23 4.41
448 449 1.734477 CTACGAGCTTGCGTGTGCT 60.734 57.895 10.46 0.00 45.23 4.40
449 450 0.731514 TACTACGAGCTTGCGTGTGC 60.732 55.000 10.46 0.00 45.23 4.57
450 451 0.982673 GTACTACGAGCTTGCGTGTG 59.017 55.000 10.46 6.10 45.23 3.82
451 452 0.879765 AGTACTACGAGCTTGCGTGT 59.120 50.000 10.46 8.82 45.23 4.49
452 453 2.819422 TAGTACTACGAGCTTGCGTG 57.181 50.000 10.46 3.89 45.23 5.34
454 455 3.002451 AGACATAGTACTACGAGCTTGCG 59.998 47.826 4.31 0.00 37.29 4.85
455 456 4.555348 AGACATAGTACTACGAGCTTGC 57.445 45.455 4.31 0.00 0.00 4.01
456 457 5.236695 TGCTAGACATAGTACTACGAGCTTG 59.763 44.000 18.38 0.00 0.00 4.01
457 458 5.236911 GTGCTAGACATAGTACTACGAGCTT 59.763 44.000 18.38 0.00 40.39 3.74
458 459 4.751098 GTGCTAGACATAGTACTACGAGCT 59.249 45.833 18.38 11.23 40.39 4.09
459 460 4.376210 CGTGCTAGACATAGTACTACGAGC 60.376 50.000 4.31 10.38 41.12 5.03
460 461 4.376210 GCGTGCTAGACATAGTACTACGAG 60.376 50.000 4.31 1.11 41.12 4.18
461 462 3.492383 GCGTGCTAGACATAGTACTACGA 59.508 47.826 4.31 0.00 41.12 3.43
462 463 3.246936 TGCGTGCTAGACATAGTACTACG 59.753 47.826 4.31 4.72 41.12 3.51
463 464 4.525686 GTGCGTGCTAGACATAGTACTAC 58.474 47.826 4.31 0.00 41.12 2.73
464 465 3.246936 CGTGCGTGCTAGACATAGTACTA 59.753 47.826 4.77 4.77 41.12 1.82
465 466 2.031807 CGTGCGTGCTAGACATAGTACT 59.968 50.000 0.00 0.00 41.12 2.73
466 467 2.031314 TCGTGCGTGCTAGACATAGTAC 59.969 50.000 0.00 0.00 40.21 2.73
467 468 2.282407 TCGTGCGTGCTAGACATAGTA 58.718 47.619 0.00 0.00 0.00 1.82
468 469 1.092348 TCGTGCGTGCTAGACATAGT 58.908 50.000 0.00 0.00 0.00 2.12
469 470 2.407521 ATCGTGCGTGCTAGACATAG 57.592 50.000 0.00 0.00 0.00 2.23
470 471 2.876550 ACTATCGTGCGTGCTAGACATA 59.123 45.455 0.00 0.00 0.00 2.29
471 472 1.676529 ACTATCGTGCGTGCTAGACAT 59.323 47.619 0.00 0.00 0.00 3.06
472 473 1.092348 ACTATCGTGCGTGCTAGACA 58.908 50.000 0.00 0.00 0.00 3.41
473 474 2.190325 AACTATCGTGCGTGCTAGAC 57.810 50.000 0.00 0.00 0.00 2.59
474 475 2.933495 AAACTATCGTGCGTGCTAGA 57.067 45.000 0.00 0.00 0.00 2.43
475 476 3.991605 AAAAACTATCGTGCGTGCTAG 57.008 42.857 0.00 0.00 0.00 3.42
492 493 6.816134 TGGACGATTGATGATTCTCAAAAA 57.184 33.333 0.00 0.00 38.55 1.94
493 494 6.183360 CCATGGACGATTGATGATTCTCAAAA 60.183 38.462 5.56 0.00 38.55 2.44
494 495 5.297527 CCATGGACGATTGATGATTCTCAAA 59.702 40.000 5.56 0.00 38.55 2.69
495 496 4.818005 CCATGGACGATTGATGATTCTCAA 59.182 41.667 5.56 0.00 39.35 3.02
496 497 4.383173 CCATGGACGATTGATGATTCTCA 58.617 43.478 5.56 0.00 0.00 3.27
497 498 3.188048 GCCATGGACGATTGATGATTCTC 59.812 47.826 18.40 0.00 0.00 2.87
498 499 3.144506 GCCATGGACGATTGATGATTCT 58.855 45.455 18.40 0.00 0.00 2.40
499 500 2.096069 CGCCATGGACGATTGATGATTC 60.096 50.000 18.40 0.00 0.00 2.52
500 501 1.875514 CGCCATGGACGATTGATGATT 59.124 47.619 18.40 0.00 0.00 2.57
501 502 1.202687 ACGCCATGGACGATTGATGAT 60.203 47.619 27.68 6.84 0.00 2.45
502 503 0.177836 ACGCCATGGACGATTGATGA 59.822 50.000 27.68 0.00 0.00 2.92
503 504 0.583438 GACGCCATGGACGATTGATG 59.417 55.000 27.68 5.11 0.00 3.07
504 505 0.875908 CGACGCCATGGACGATTGAT 60.876 55.000 27.68 10.78 0.00 2.57
505 506 1.518352 CGACGCCATGGACGATTGA 60.518 57.895 27.68 0.00 0.00 2.57
506 507 1.752501 GACGACGCCATGGACGATTG 61.753 60.000 27.68 19.57 0.00 2.67
507 508 1.518572 GACGACGCCATGGACGATT 60.519 57.895 27.68 14.81 0.00 3.34
508 509 1.945354 AAGACGACGCCATGGACGAT 61.945 55.000 27.68 15.70 0.00 3.73
509 510 2.632544 AAGACGACGCCATGGACGA 61.633 57.895 27.68 0.00 0.00 4.20
510 511 2.126071 AAGACGACGCCATGGACG 60.126 61.111 18.40 20.56 0.00 4.79
511 512 2.100631 CCAAGACGACGCCATGGAC 61.101 63.158 18.40 5.97 32.82 4.02
512 513 2.264480 CCAAGACGACGCCATGGA 59.736 61.111 18.40 0.00 32.82 3.41
513 514 2.047274 ACCAAGACGACGCCATGG 60.047 61.111 7.63 7.63 37.19 3.66
514 515 2.100631 GGACCAAGACGACGCCATG 61.101 63.158 0.00 0.00 0.00 3.66
515 516 2.264794 GGACCAAGACGACGCCAT 59.735 61.111 0.00 0.00 0.00 4.40
516 517 3.998672 GGGACCAAGACGACGCCA 61.999 66.667 0.00 0.00 0.00 5.69
517 518 3.524648 TTGGGACCAAGACGACGCC 62.525 63.158 0.00 0.00 0.00 5.68
518 519 2.029964 TTGGGACCAAGACGACGC 59.970 61.111 0.00 0.00 0.00 5.19
519 520 0.666577 GAGTTGGGACCAAGACGACG 60.667 60.000 3.57 0.00 36.52 5.12
520 521 0.320508 GGAGTTGGGACCAAGACGAC 60.321 60.000 3.57 0.00 36.52 4.34
521 522 1.477685 GGGAGTTGGGACCAAGACGA 61.478 60.000 3.57 0.00 36.52 4.20
522 523 1.003718 GGGAGTTGGGACCAAGACG 60.004 63.158 3.57 0.00 36.52 4.18
523 524 0.250770 GTGGGAGTTGGGACCAAGAC 60.251 60.000 3.57 1.81 36.52 3.01
524 525 1.764571 CGTGGGAGTTGGGACCAAGA 61.765 60.000 3.57 0.00 36.09 3.02
525 526 1.302511 CGTGGGAGTTGGGACCAAG 60.303 63.158 3.57 0.00 36.52 3.61
526 527 1.766864 TCGTGGGAGTTGGGACCAA 60.767 57.895 0.00 0.00 35.77 3.67
527 528 2.122769 TCGTGGGAGTTGGGACCA 60.123 61.111 0.00 0.00 0.00 4.02
528 529 2.047213 TTGTCGTGGGAGTTGGGACC 62.047 60.000 0.00 0.00 0.00 4.46
529 530 0.883370 GTTGTCGTGGGAGTTGGGAC 60.883 60.000 0.00 0.00 0.00 4.46
530 531 1.052124 AGTTGTCGTGGGAGTTGGGA 61.052 55.000 0.00 0.00 0.00 4.37
531 532 0.602905 GAGTTGTCGTGGGAGTTGGG 60.603 60.000 0.00 0.00 0.00 4.12
532 533 0.393077 AGAGTTGTCGTGGGAGTTGG 59.607 55.000 0.00 0.00 0.00 3.77
533 534 1.867233 CAAGAGTTGTCGTGGGAGTTG 59.133 52.381 0.00 0.00 0.00 3.16
534 535 1.202651 CCAAGAGTTGTCGTGGGAGTT 60.203 52.381 0.00 0.00 45.79 3.01
535 536 0.393077 CCAAGAGTTGTCGTGGGAGT 59.607 55.000 0.00 0.00 45.79 3.85
536 537 3.217242 CCAAGAGTTGTCGTGGGAG 57.783 57.895 0.00 0.00 45.79 4.30
540 541 1.966451 GGCCCCAAGAGTTGTCGTG 60.966 63.158 0.00 0.00 32.40 4.35
541 542 2.430367 GGCCCCAAGAGTTGTCGT 59.570 61.111 0.00 0.00 0.00 4.34
542 543 2.742372 CGGCCCCAAGAGTTGTCG 60.742 66.667 0.00 0.00 0.00 4.35
543 544 1.228154 AACGGCCCCAAGAGTTGTC 60.228 57.895 0.00 0.00 0.00 3.18
544 545 1.228154 GAACGGCCCCAAGAGTTGT 60.228 57.895 0.00 0.00 0.00 3.32
545 546 1.228124 TGAACGGCCCCAAGAGTTG 60.228 57.895 0.00 0.00 0.00 3.16
546 547 1.228154 GTGAACGGCCCCAAGAGTT 60.228 57.895 0.00 0.00 0.00 3.01
547 548 2.430367 GTGAACGGCCCCAAGAGT 59.570 61.111 0.00 0.00 0.00 3.24
548 549 2.359975 GGTGAACGGCCCCAAGAG 60.360 66.667 0.00 0.00 0.00 2.85
549 550 4.323477 CGGTGAACGGCCCCAAGA 62.323 66.667 0.00 0.00 39.42 3.02
557 558 3.499737 GAGGCATGCGGTGAACGG 61.500 66.667 12.44 0.00 44.51 4.44
559 560 3.134127 GGGAGGCATGCGGTGAAC 61.134 66.667 12.44 0.00 0.00 3.18
560 561 2.424842 AAAGGGAGGCATGCGGTGAA 62.425 55.000 12.44 0.00 0.00 3.18
561 562 2.819984 GAAAGGGAGGCATGCGGTGA 62.820 60.000 12.44 0.00 0.00 4.02
562 563 2.361610 AAAGGGAGGCATGCGGTG 60.362 61.111 12.44 0.00 0.00 4.94
563 564 2.044946 GAAAGGGAGGCATGCGGT 60.045 61.111 12.44 0.26 0.00 5.68
564 565 1.379044 AAGAAAGGGAGGCATGCGG 60.379 57.895 12.44 0.00 0.00 5.69
565 566 1.379642 GGAAGAAAGGGAGGCATGCG 61.380 60.000 12.44 0.00 0.00 4.73
566 567 0.323725 TGGAAGAAAGGGAGGCATGC 60.324 55.000 9.90 9.90 0.00 4.06
567 568 1.684248 CCTGGAAGAAAGGGAGGCATG 60.684 57.143 0.00 0.00 34.07 4.06
568 569 0.627986 CCTGGAAGAAAGGGAGGCAT 59.372 55.000 0.00 0.00 34.07 4.40
569 570 2.078452 CCTGGAAGAAAGGGAGGCA 58.922 57.895 0.00 0.00 34.07 4.75
570 571 1.379176 GCCTGGAAGAAAGGGAGGC 60.379 63.158 0.00 0.00 42.37 4.70
571 572 0.034670 CTGCCTGGAAGAAAGGGAGG 60.035 60.000 0.00 0.00 46.51 4.30
572 573 3.566130 CTGCCTGGAAGAAAGGGAG 57.434 57.895 0.00 0.00 45.38 4.30
573 574 0.401738 CACTGCCTGGAAGAAAGGGA 59.598 55.000 9.21 0.00 34.07 4.20
574 575 0.111253 ACACTGCCTGGAAGAAAGGG 59.889 55.000 9.21 0.00 34.07 3.95
575 576 1.242076 CACACTGCCTGGAAGAAAGG 58.758 55.000 9.21 0.00 34.07 3.11
576 577 0.595095 GCACACTGCCTGGAAGAAAG 59.405 55.000 9.21 0.25 37.42 2.62
577 578 2.719376 GCACACTGCCTGGAAGAAA 58.281 52.632 9.21 0.00 37.42 2.52
578 579 4.481195 GCACACTGCCTGGAAGAA 57.519 55.556 9.21 0.00 37.42 2.52
619 620 4.704833 CCCTGCAGACCGTGGTGG 62.705 72.222 17.39 0.38 46.41 4.61
620 621 4.704833 CCCCTGCAGACCGTGGTG 62.705 72.222 17.39 0.00 0.00 4.17
640 641 3.530910 AACCAACTGTCCGGCCTCG 62.531 63.158 0.00 0.00 0.00 4.63
641 642 1.966451 CAACCAACTGTCCGGCCTC 60.966 63.158 0.00 0.00 0.00 4.70
642 643 2.113139 CAACCAACTGTCCGGCCT 59.887 61.111 0.00 0.00 0.00 5.19
643 644 2.203294 ACAACCAACTGTCCGGCC 60.203 61.111 0.00 0.00 0.00 6.13
644 645 3.340789 GACAACCAACTGTCCGGC 58.659 61.111 0.00 0.00 39.93 6.13
648 649 1.145803 GCGTAGGACAACCAACTGTC 58.854 55.000 0.00 0.00 44.21 3.51
649 650 0.599204 CGCGTAGGACAACCAACTGT 60.599 55.000 0.00 0.00 38.94 3.55
650 651 0.319211 TCGCGTAGGACAACCAACTG 60.319 55.000 5.77 0.00 38.94 3.16
651 652 0.390124 TTCGCGTAGGACAACCAACT 59.610 50.000 5.77 0.00 38.94 3.16
652 653 0.788391 CTTCGCGTAGGACAACCAAC 59.212 55.000 5.77 0.00 38.94 3.77
653 654 0.320073 CCTTCGCGTAGGACAACCAA 60.320 55.000 25.94 0.00 37.50 3.67
654 655 1.290955 CCTTCGCGTAGGACAACCA 59.709 57.895 25.94 0.00 37.50 3.67
655 656 2.098831 GCCTTCGCGTAGGACAACC 61.099 63.158 32.85 12.72 37.50 3.77
656 657 1.080025 AGCCTTCGCGTAGGACAAC 60.080 57.895 32.85 16.22 41.18 3.32
657 658 1.080093 CAGCCTTCGCGTAGGACAA 60.080 57.895 32.85 5.69 41.18 3.18
658 659 2.571757 CAGCCTTCGCGTAGGACA 59.428 61.111 32.85 0.00 41.18 4.02
659 660 1.660560 TACCAGCCTTCGCGTAGGAC 61.661 60.000 32.85 23.00 41.18 3.85
660 661 1.378911 TACCAGCCTTCGCGTAGGA 60.379 57.895 32.85 10.85 41.18 2.94
661 662 1.226888 GTACCAGCCTTCGCGTAGG 60.227 63.158 25.77 25.77 41.18 3.18
662 663 0.102481 ATGTACCAGCCTTCGCGTAG 59.898 55.000 5.77 5.72 41.18 3.51
663 664 1.391577 TATGTACCAGCCTTCGCGTA 58.608 50.000 5.77 0.00 41.18 4.42
664 665 0.533491 TTATGTACCAGCCTTCGCGT 59.467 50.000 5.77 0.00 41.18 6.01
665 666 0.928229 GTTATGTACCAGCCTTCGCG 59.072 55.000 0.00 0.00 41.18 5.87
666 667 1.296727 GGTTATGTACCAGCCTTCGC 58.703 55.000 0.00 0.00 46.92 4.70
675 676 3.149196 TCGTCGGATAGGGTTATGTACC 58.851 50.000 0.00 0.00 46.99 3.34
676 677 4.276926 ACTTCGTCGGATAGGGTTATGTAC 59.723 45.833 0.00 0.00 0.00 2.90
677 678 4.464008 ACTTCGTCGGATAGGGTTATGTA 58.536 43.478 0.00 0.00 0.00 2.29
678 679 3.294214 ACTTCGTCGGATAGGGTTATGT 58.706 45.455 0.00 0.00 0.00 2.29
679 680 5.640189 ATACTTCGTCGGATAGGGTTATG 57.360 43.478 0.00 0.00 0.00 1.90
680 681 6.661304 AAATACTTCGTCGGATAGGGTTAT 57.339 37.500 0.00 0.00 0.00 1.89
681 682 6.096705 TCAAAATACTTCGTCGGATAGGGTTA 59.903 38.462 0.00 0.00 0.00 2.85
682 683 5.105228 TCAAAATACTTCGTCGGATAGGGTT 60.105 40.000 0.00 0.00 0.00 4.11
683 684 4.403432 TCAAAATACTTCGTCGGATAGGGT 59.597 41.667 0.00 0.00 0.00 4.34
684 685 4.743644 GTCAAAATACTTCGTCGGATAGGG 59.256 45.833 0.00 0.00 0.00 3.53
685 686 5.345702 TGTCAAAATACTTCGTCGGATAGG 58.654 41.667 0.00 0.00 0.00 2.57
686 687 6.880822 TTGTCAAAATACTTCGTCGGATAG 57.119 37.500 0.00 0.00 0.00 2.08
687 688 7.655236 TTTTGTCAAAATACTTCGTCGGATA 57.345 32.000 6.65 0.00 0.00 2.59
688 689 6.548441 TTTTGTCAAAATACTTCGTCGGAT 57.452 33.333 6.65 0.00 0.00 4.18
689 690 5.987777 TTTTGTCAAAATACTTCGTCGGA 57.012 34.783 6.65 0.00 0.00 4.55
721 722 2.704719 TGGGACAGATACCCCCAAC 58.295 57.895 0.00 0.00 46.40 3.77
724 725 4.492232 TGTGGGACAGATACCCCC 57.508 61.111 0.00 0.00 46.21 5.40
733 734 4.141367 TGAAAATGGTAGTTCTGTGGGACA 60.141 41.667 0.00 0.00 0.00 4.02
774 775 8.934507 TGTCACAAAATTAGAAATTTTCGGTT 57.065 26.923 7.25 0.00 34.02 4.44
808 809 1.629013 GACGCATCAACACGATCTGA 58.371 50.000 0.00 0.00 29.21 3.27
811 812 1.290203 ATGGACGCATCAACACGATC 58.710 50.000 0.00 0.00 29.21 3.69
812 813 1.737838 AATGGACGCATCAACACGAT 58.262 45.000 0.00 0.00 33.27 3.73
823 824 3.165890 GTTAAAACGGCTAAATGGACGC 58.834 45.455 0.00 0.00 42.13 5.19
891 892 2.739671 GGCGTCCGTTAGCCGTTT 60.740 61.111 0.00 0.00 44.22 3.60
1024 1032 3.815962 GGAGGTGAGAAACAAAGGAAGAC 59.184 47.826 0.00 0.00 0.00 3.01
1114 1126 2.354821 CTCGTCCATGTACTCGTCATCA 59.645 50.000 0.00 0.00 0.00 3.07
1142 1154 3.065786 ACAAAATACTCCATCTGCATGCG 59.934 43.478 14.09 8.20 0.00 4.73
1379 1398 2.365293 GTCCCTTCAAATGCCACAAACT 59.635 45.455 0.00 0.00 0.00 2.66
1576 1706 8.178313 GCTGACTAAATCCAGTAAAATTCAGTC 58.822 37.037 0.00 0.00 33.19 3.51
1599 1729 9.089601 TGAAAATGCAGTGAAATATTAATGCTG 57.910 29.630 10.89 8.00 34.80 4.41
1892 2057 5.569355 TCTCCTTAAGTTCATTGATTGCCA 58.431 37.500 0.97 0.00 0.00 4.92
2016 2181 3.161866 GGCCTTCCTGGTGTTTTGAATA 58.838 45.455 0.00 0.00 38.35 1.75
2502 2693 6.964370 TCTGTGAAATGTTACAACAAACTTCG 59.036 34.615 0.00 0.00 43.03 3.79
2805 3043 4.198028 TCCCATCATCATCATCATCGAC 57.802 45.455 0.00 0.00 0.00 4.20
2813 3051 2.366590 CGTCCTCTTCCCATCATCATCA 59.633 50.000 0.00 0.00 0.00 3.07
2814 3052 2.289320 CCGTCCTCTTCCCATCATCATC 60.289 54.545 0.00 0.00 0.00 2.92
2815 3053 1.696336 CCGTCCTCTTCCCATCATCAT 59.304 52.381 0.00 0.00 0.00 2.45
2868 3106 1.396301 GAAGACGACGACGACCTACAT 59.604 52.381 15.32 0.00 42.66 2.29
2897 3138 1.125384 CATCAAATGCAAACGCAGCAC 59.875 47.619 0.00 0.00 45.95 4.40
2930 3171 1.153628 GACCACCGCTATGTCGCTT 60.154 57.895 0.00 0.00 0.00 4.68
3012 3253 1.149174 GGTGGTCATGCCCATCGAT 59.851 57.895 0.00 0.00 36.74 3.59
3053 3294 1.449246 GAGAAGCAGCGCATGGAGT 60.449 57.895 11.47 0.00 0.00 3.85
3144 3385 4.341487 TCTTCCTCGACTACATGAAGGAA 58.659 43.478 0.00 6.94 34.58 3.36
3145 3386 3.948473 CTCTTCCTCGACTACATGAAGGA 59.052 47.826 0.00 0.00 34.58 3.36
3208 3449 1.691219 TCCCAACTGGCAAGGGATC 59.309 57.895 15.73 0.00 46.42 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.