Multiple sequence alignment - TraesCS2D01G084300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G084300 chr2D 100.000 8072 0 0 1 8072 36545668 36537597 0.000000e+00 14907
1 TraesCS2D01G084300 chr2B 91.394 7274 408 107 402 7586 62556712 62549568 0.000000e+00 9764
2 TraesCS2D01G084300 chr2B 86.765 204 12 5 88 285 62556961 62556767 6.350000e-51 213
3 TraesCS2D01G084300 chr2B 76.596 376 38 23 7707 8072 62549453 62549118 2.330000e-35 161
4 TraesCS2D01G084300 chr2A 95.710 4709 122 39 1143 5804 40546806 40542131 0.000000e+00 7504
5 TraesCS2D01G084300 chr2A 90.061 1318 95 25 5810 7112 40542000 40540704 0.000000e+00 1676
6 TraesCS2D01G084300 chr2A 88.477 512 44 12 630 1133 40547693 40547189 8.960000e-169 604
7 TraesCS2D01G084300 chr2A 81.229 293 20 18 7242 7534 40540618 40540361 3.820000e-48 204
8 TraesCS2D01G084300 chr2A 76.883 385 33 25 7707 8072 40540233 40539886 5.010000e-37 167
9 TraesCS2D01G084300 chr1B 86.280 1137 111 17 1109 2209 200412731 200413858 0.000000e+00 1194
10 TraesCS2D01G084300 chr3D 88.148 270 15 7 7803 8072 560080232 560079980 1.020000e-78 305
11 TraesCS2D01G084300 chr1D 86.164 159 22 0 5496 5654 314707071 314707229 1.080000e-38 172
12 TraesCS2D01G084300 chr1A 86.164 159 22 0 5496 5654 395178747 395178905 1.080000e-38 172


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G084300 chr2D 36537597 36545668 8071 True 14907.000000 14907 100.000000 1 8072 1 chr2D.!!$R1 8071
1 TraesCS2D01G084300 chr2B 62549118 62556961 7843 True 3379.333333 9764 84.918333 88 8072 3 chr2B.!!$R1 7984
2 TraesCS2D01G084300 chr2A 40539886 40547693 7807 True 2031.000000 7504 86.472000 630 8072 5 chr2A.!!$R1 7442
3 TraesCS2D01G084300 chr1B 200412731 200413858 1127 False 1194.000000 1194 86.280000 1109 2209 1 chr1B.!!$F1 1100

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 0.037697 TGGCGCTTATCACACGTTCT 60.038 50.000 7.64 0.00 0.00 3.01 F
876 896 0.314302 CCGAGGTGGACGATGGATAC 59.686 60.000 0.00 0.00 42.00 2.24 F
1553 1979 0.828022 AGTTCGTCAGTGGTGGTGAA 59.172 50.000 0.00 0.00 0.00 3.18 F
1911 2363 0.896923 GCAAGCAATTCCCCATGACA 59.103 50.000 0.00 0.00 0.00 3.58 F
2849 3308 0.901114 AGTGCATGCCATCTTTGCCA 60.901 50.000 16.68 0.00 35.51 4.92 F
3484 3943 0.758734 CTGCTGGGGATATCCGAACA 59.241 55.000 15.69 12.83 36.71 3.18 F
4408 4884 3.055094 AGAATCACCGCCAACATAGACTT 60.055 43.478 0.00 0.00 0.00 3.01 F
5369 5852 0.106918 AAAAACCACCGGTCAGCAGA 60.107 50.000 2.59 0.00 33.12 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1562 1988 0.037232 GCTAACACCGCTCTTGGTCT 60.037 55.000 0.00 0.00 41.38 3.85 R
2106 2562 0.525761 CCCCATTTGTGCCAACGTAG 59.474 55.000 0.00 0.00 0.00 3.51 R
2631 3090 1.221523 AGCTGGATCCCATGGAGACTA 59.778 52.381 15.22 0.58 34.05 2.59 R
3256 3715 3.641437 ACAACACCATCAACCATTTCG 57.359 42.857 0.00 0.00 0.00 3.46 R
3906 4365 4.211164 CGTGAGACAACAGCAACAATTAGA 59.789 41.667 0.00 0.00 0.00 2.10 R
5352 5835 0.110486 ATTCTGCTGACCGGTGGTTT 59.890 50.000 14.63 0.00 35.25 3.27 R
6294 6914 0.948678 TGCCAAAAGTAACAGCCGAC 59.051 50.000 0.00 0.00 0.00 4.79 R
7233 7895 0.250124 CCGACACCAAACCTACAGCA 60.250 55.000 0.00 0.00 0.00 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.869187 TGTGGCGCTTATCACACG 58.131 55.556 12.35 0.00 38.75 4.49
19 20 1.005512 TGTGGCGCTTATCACACGT 60.006 52.632 12.35 0.00 38.75 4.49
20 21 0.601576 TGTGGCGCTTATCACACGTT 60.602 50.000 12.35 0.00 38.75 3.99
21 22 0.094730 GTGGCGCTTATCACACGTTC 59.905 55.000 7.64 0.00 34.32 3.95
22 23 0.037697 TGGCGCTTATCACACGTTCT 60.038 50.000 7.64 0.00 0.00 3.01
23 24 0.645868 GGCGCTTATCACACGTTCTC 59.354 55.000 7.64 0.00 0.00 2.87
24 25 1.630148 GCGCTTATCACACGTTCTCT 58.370 50.000 0.00 0.00 0.00 3.10
25 26 1.584308 GCGCTTATCACACGTTCTCTC 59.416 52.381 0.00 0.00 0.00 3.20
26 27 2.863739 CGCTTATCACACGTTCTCTCA 58.136 47.619 0.00 0.00 0.00 3.27
27 28 3.439293 CGCTTATCACACGTTCTCTCAT 58.561 45.455 0.00 0.00 0.00 2.90
28 29 3.859961 CGCTTATCACACGTTCTCTCATT 59.140 43.478 0.00 0.00 0.00 2.57
29 30 5.034797 CGCTTATCACACGTTCTCTCATTA 58.965 41.667 0.00 0.00 0.00 1.90
30 31 5.515270 CGCTTATCACACGTTCTCTCATTAA 59.485 40.000 0.00 0.00 0.00 1.40
31 32 6.034577 CGCTTATCACACGTTCTCTCATTAAA 59.965 38.462 0.00 0.00 0.00 1.52
32 33 7.394872 GCTTATCACACGTTCTCTCATTAAAG 58.605 38.462 0.00 0.00 0.00 1.85
33 34 5.786401 ATCACACGTTCTCTCATTAAAGC 57.214 39.130 0.00 0.00 0.00 3.51
34 35 3.673338 TCACACGTTCTCTCATTAAAGCG 59.327 43.478 0.00 0.00 0.00 4.68
35 36 2.412089 ACACGTTCTCTCATTAAAGCGC 59.588 45.455 0.00 0.00 0.00 5.92
36 37 2.411748 CACGTTCTCTCATTAAAGCGCA 59.588 45.455 11.47 0.00 0.00 6.09
37 38 3.062639 CACGTTCTCTCATTAAAGCGCAT 59.937 43.478 11.47 0.00 0.00 4.73
38 39 3.684788 ACGTTCTCTCATTAAAGCGCATT 59.315 39.130 11.47 6.65 0.00 3.56
39 40 4.201724 ACGTTCTCTCATTAAAGCGCATTC 60.202 41.667 11.47 0.00 0.00 2.67
40 41 4.033358 CGTTCTCTCATTAAAGCGCATTCT 59.967 41.667 11.47 0.00 0.00 2.40
41 42 5.232202 CGTTCTCTCATTAAAGCGCATTCTA 59.768 40.000 11.47 0.00 0.00 2.10
42 43 6.074088 CGTTCTCTCATTAAAGCGCATTCTAT 60.074 38.462 11.47 0.00 0.00 1.98
43 44 7.287229 GTTCTCTCATTAAAGCGCATTCTATC 58.713 38.462 11.47 0.00 0.00 2.08
44 45 5.928839 TCTCTCATTAAAGCGCATTCTATCC 59.071 40.000 11.47 0.00 0.00 2.59
45 46 4.997395 TCTCATTAAAGCGCATTCTATCCC 59.003 41.667 11.47 0.00 0.00 3.85
46 47 4.713553 TCATTAAAGCGCATTCTATCCCA 58.286 39.130 11.47 0.00 0.00 4.37
47 48 5.316167 TCATTAAAGCGCATTCTATCCCAT 58.684 37.500 11.47 0.00 0.00 4.00
48 49 5.769662 TCATTAAAGCGCATTCTATCCCATT 59.230 36.000 11.47 0.00 0.00 3.16
49 50 3.996150 AAAGCGCATTCTATCCCATTG 57.004 42.857 11.47 0.00 0.00 2.82
50 51 2.645838 AGCGCATTCTATCCCATTGT 57.354 45.000 11.47 0.00 0.00 2.71
51 52 3.769739 AGCGCATTCTATCCCATTGTA 57.230 42.857 11.47 0.00 0.00 2.41
52 53 4.292186 AGCGCATTCTATCCCATTGTAT 57.708 40.909 11.47 0.00 0.00 2.29
53 54 4.005650 AGCGCATTCTATCCCATTGTATG 58.994 43.478 11.47 0.00 0.00 2.39
71 72 9.396022 CATTGTATGGATCTGGTAAAAGTTAGT 57.604 33.333 0.00 0.00 0.00 2.24
72 73 8.786826 TTGTATGGATCTGGTAAAAGTTAGTG 57.213 34.615 0.00 0.00 0.00 2.74
73 74 6.821665 TGTATGGATCTGGTAAAAGTTAGTGC 59.178 38.462 0.00 0.00 0.00 4.40
74 75 5.499004 TGGATCTGGTAAAAGTTAGTGCT 57.501 39.130 0.00 0.00 0.00 4.40
75 76 5.245531 TGGATCTGGTAAAAGTTAGTGCTG 58.754 41.667 0.00 0.00 0.00 4.41
76 77 4.636206 GGATCTGGTAAAAGTTAGTGCTGG 59.364 45.833 0.00 0.00 0.00 4.85
77 78 3.408634 TCTGGTAAAAGTTAGTGCTGGC 58.591 45.455 0.00 0.00 0.00 4.85
78 79 2.488153 CTGGTAAAAGTTAGTGCTGGCC 59.512 50.000 0.00 0.00 0.00 5.36
79 80 1.467342 GGTAAAAGTTAGTGCTGGCCG 59.533 52.381 0.00 0.00 0.00 6.13
80 81 1.135774 GTAAAAGTTAGTGCTGGCCGC 60.136 52.381 11.92 11.92 39.77 6.53
94 95 1.953138 GCCGCATGATCTGTCTCCG 60.953 63.158 0.00 0.00 0.00 4.63
100 101 2.801342 GCATGATCTGTCTCCGTTCCTC 60.801 54.545 0.00 0.00 0.00 3.71
137 142 0.737715 GCTCACATGTGTCGTCCTCC 60.738 60.000 24.63 3.06 0.00 4.30
139 144 2.092323 CTCACATGTGTCGTCCTCCTA 58.908 52.381 24.63 1.15 0.00 2.94
159 164 1.340248 AGTCACGTTTCATCGTCCACT 59.660 47.619 0.00 0.00 42.27 4.00
173 178 3.496884 TCGTCCACTATGCTTTGTTTGTC 59.503 43.478 0.00 0.00 0.00 3.18
174 179 3.249799 CGTCCACTATGCTTTGTTTGTCA 59.750 43.478 0.00 0.00 0.00 3.58
175 180 4.611355 CGTCCACTATGCTTTGTTTGTCAG 60.611 45.833 0.00 0.00 0.00 3.51
176 181 4.275936 GTCCACTATGCTTTGTTTGTCAGT 59.724 41.667 0.00 0.00 0.00 3.41
177 182 4.887071 TCCACTATGCTTTGTTTGTCAGTT 59.113 37.500 0.00 0.00 0.00 3.16
178 183 5.359576 TCCACTATGCTTTGTTTGTCAGTTT 59.640 36.000 0.00 0.00 0.00 2.66
179 184 5.459762 CCACTATGCTTTGTTTGTCAGTTTG 59.540 40.000 0.00 0.00 0.00 2.93
180 185 6.035843 CACTATGCTTTGTTTGTCAGTTTGT 58.964 36.000 0.00 0.00 0.00 2.83
190 195 5.241949 TGTTTGTCAGTTTGTGTACCACTTT 59.758 36.000 0.00 0.00 35.11 2.66
210 216 1.330213 TCGACACACGTACGAGTTTGA 59.670 47.619 24.41 15.81 43.13 2.69
228 234 5.936956 AGTTTGATGGACTGAAATCTGAGTC 59.063 40.000 0.00 0.00 38.32 3.36
229 235 4.115401 TGATGGACTGAAATCTGAGTCG 57.885 45.455 0.00 0.00 39.69 4.18
267 274 5.178061 CAAAGCAAAGTTTCCCCCAATATC 58.822 41.667 0.00 0.00 0.00 1.63
272 279 4.965283 AAGTTTCCCCCAATATCTTCCA 57.035 40.909 0.00 0.00 0.00 3.53
273 280 5.487861 AAGTTTCCCCCAATATCTTCCAT 57.512 39.130 0.00 0.00 0.00 3.41
276 283 5.899547 AGTTTCCCCCAATATCTTCCATTTC 59.100 40.000 0.00 0.00 0.00 2.17
302 309 2.905075 TCTGTGCATACTGATTTCCCG 58.095 47.619 0.00 0.00 30.90 5.14
303 310 1.331756 CTGTGCATACTGATTTCCCGC 59.668 52.381 0.00 0.00 0.00 6.13
304 311 1.339535 TGTGCATACTGATTTCCCGCA 60.340 47.619 0.00 0.00 0.00 5.69
305 312 1.949525 GTGCATACTGATTTCCCGCAT 59.050 47.619 0.00 0.00 0.00 4.73
306 313 1.948834 TGCATACTGATTTCCCGCATG 59.051 47.619 0.00 0.00 0.00 4.06
307 314 2.221169 GCATACTGATTTCCCGCATGA 58.779 47.619 0.00 0.00 0.00 3.07
308 315 2.031682 GCATACTGATTTCCCGCATGAC 60.032 50.000 0.00 0.00 0.00 3.06
309 316 3.205338 CATACTGATTTCCCGCATGACA 58.795 45.455 0.00 0.00 0.00 3.58
310 317 2.198827 ACTGATTTCCCGCATGACAA 57.801 45.000 0.00 0.00 0.00 3.18
311 318 2.086869 ACTGATTTCCCGCATGACAAG 58.913 47.619 0.00 0.00 0.00 3.16
312 319 0.810648 TGATTTCCCGCATGACAAGC 59.189 50.000 0.00 0.00 0.00 4.01
313 320 0.810648 GATTTCCCGCATGACAAGCA 59.189 50.000 3.27 0.00 0.00 3.91
314 321 1.406539 GATTTCCCGCATGACAAGCAT 59.593 47.619 3.27 0.00 37.85 3.79
315 322 1.255882 TTTCCCGCATGACAAGCATT 58.744 45.000 3.27 0.00 34.15 3.56
316 323 1.255882 TTCCCGCATGACAAGCATTT 58.744 45.000 3.27 0.00 34.15 2.32
317 324 1.255882 TCCCGCATGACAAGCATTTT 58.744 45.000 3.27 0.00 34.15 1.82
318 325 1.617850 TCCCGCATGACAAGCATTTTT 59.382 42.857 3.27 0.00 34.15 1.94
339 346 7.403312 TTTTTCTCAAACAGATTCCAGTTGA 57.597 32.000 0.00 0.00 0.00 3.18
340 347 7.587037 TTTTCTCAAACAGATTCCAGTTGAT 57.413 32.000 0.00 0.00 0.00 2.57
341 348 7.587037 TTTCTCAAACAGATTCCAGTTGATT 57.413 32.000 0.00 0.00 0.00 2.57
342 349 7.587037 TTCTCAAACAGATTCCAGTTGATTT 57.413 32.000 0.00 0.00 0.00 2.17
343 350 7.206981 TCTCAAACAGATTCCAGTTGATTTC 57.793 36.000 0.00 0.00 0.00 2.17
344 351 6.000891 TCAAACAGATTCCAGTTGATTTCG 57.999 37.500 0.00 0.00 0.00 3.46
345 352 5.048782 TCAAACAGATTCCAGTTGATTTCGG 60.049 40.000 0.00 0.00 0.00 4.30
373 380 0.523519 TGCGCAAACAACACTGAACA 59.476 45.000 8.16 0.00 0.00 3.18
374 381 1.133982 TGCGCAAACAACACTGAACAT 59.866 42.857 8.16 0.00 0.00 2.71
375 382 1.780860 GCGCAAACAACACTGAACATC 59.219 47.619 0.30 0.00 0.00 3.06
376 383 2.541588 GCGCAAACAACACTGAACATCT 60.542 45.455 0.30 0.00 0.00 2.90
377 384 3.303725 GCGCAAACAACACTGAACATCTA 60.304 43.478 0.30 0.00 0.00 1.98
379 386 4.211389 GCAAACAACACTGAACATCTACG 58.789 43.478 0.00 0.00 0.00 3.51
380 387 4.260620 GCAAACAACACTGAACATCTACGT 60.261 41.667 0.00 0.00 0.00 3.57
381 388 5.432157 CAAACAACACTGAACATCTACGTC 58.568 41.667 0.00 0.00 0.00 4.34
382 389 4.316205 ACAACACTGAACATCTACGTCA 57.684 40.909 0.00 0.00 0.00 4.35
383 390 4.299155 ACAACACTGAACATCTACGTCAG 58.701 43.478 0.00 0.00 34.85 3.51
384 391 4.202121 ACAACACTGAACATCTACGTCAGT 60.202 41.667 0.00 0.00 41.67 3.41
385 392 5.009310 ACAACACTGAACATCTACGTCAGTA 59.991 40.000 5.30 0.00 39.33 2.74
386 393 5.899120 ACACTGAACATCTACGTCAGTAT 57.101 39.130 5.30 0.00 39.33 2.12
387 394 6.997239 ACACTGAACATCTACGTCAGTATA 57.003 37.500 5.30 0.00 39.33 1.47
388 395 7.387119 ACACTGAACATCTACGTCAGTATAA 57.613 36.000 5.30 0.00 39.33 0.98
389 396 7.997482 ACACTGAACATCTACGTCAGTATAAT 58.003 34.615 5.30 0.00 39.33 1.28
390 397 7.915923 ACACTGAACATCTACGTCAGTATAATG 59.084 37.037 5.30 0.00 39.33 1.90
391 398 7.915923 CACTGAACATCTACGTCAGTATAATGT 59.084 37.037 5.30 0.00 39.33 2.71
392 399 7.915923 ACTGAACATCTACGTCAGTATAATGTG 59.084 37.037 3.80 0.00 39.53 3.21
393 400 7.768240 TGAACATCTACGTCAGTATAATGTGT 58.232 34.615 0.00 3.47 38.26 3.72
394 401 8.895737 TGAACATCTACGTCAGTATAATGTGTA 58.104 33.333 0.00 4.39 38.26 2.90
395 402 9.894783 GAACATCTACGTCAGTATAATGTGTAT 57.105 33.333 0.00 0.00 38.26 2.29
437 444 8.076178 GCATATTTGTTTCTATTTGGCGAGTAT 58.924 33.333 0.00 0.00 0.00 2.12
441 448 9.950680 ATTTGTTTCTATTTGGCGAGTATAATG 57.049 29.630 0.00 0.00 0.00 1.90
444 451 7.551262 TGTTTCTATTTGGCGAGTATAATGTGT 59.449 33.333 0.00 0.00 0.00 3.72
445 452 9.037737 GTTTCTATTTGGCGAGTATAATGTGTA 57.962 33.333 0.00 0.00 0.00 2.90
446 453 9.772973 TTTCTATTTGGCGAGTATAATGTGTAT 57.227 29.630 0.00 0.00 0.00 2.29
452 459 9.811995 TTTGGCGAGTATAATGTGTATATATCC 57.188 33.333 0.00 0.00 0.00 2.59
453 460 8.528044 TGGCGAGTATAATGTGTATATATCCA 57.472 34.615 0.00 0.00 0.00 3.41
454 461 9.143155 TGGCGAGTATAATGTGTATATATCCAT 57.857 33.333 0.00 0.00 0.00 3.41
471 478 3.884895 TCCATGTACATTTGCTACTGGG 58.115 45.455 5.37 1.07 0.00 4.45
501 517 2.088674 GAGCATCTACGGCCGGTCAT 62.089 60.000 31.76 14.70 0.00 3.06
506 522 0.968901 TCTACGGCCGGTCATTGTCT 60.969 55.000 31.76 7.29 0.00 3.41
512 528 1.153369 CCGGTCATTGTCTGCGGAT 60.153 57.895 0.00 0.00 33.71 4.18
531 547 0.377905 TGCATCCAATCATGTTCGCG 59.622 50.000 0.00 0.00 0.00 5.87
534 550 0.819259 ATCCAATCATGTTCGCGGGG 60.819 55.000 6.13 0.00 0.00 5.73
543 559 3.243053 TTCGCGGGGGTTTGAGGA 61.243 61.111 6.13 0.00 0.00 3.71
547 563 2.593956 GCGGGGGTTTGAGGAGTCT 61.594 63.158 0.00 0.00 0.00 3.24
553 569 3.500471 GGGGGTTTGAGGAGTCTGATTTT 60.500 47.826 0.00 0.00 0.00 1.82
565 582 5.163814 GGAGTCTGATTTTCAAGTCCGATTG 60.164 44.000 0.00 0.00 0.00 2.67
568 585 6.934645 AGTCTGATTTTCAAGTCCGATTGTAA 59.065 34.615 0.00 0.00 0.00 2.41
603 620 8.804912 TTTACACCCAACTAACAAAGTTTCTA 57.195 30.769 0.00 0.00 46.61 2.10
615 632 2.517650 AGTTTCTATGCGCTAGGCTC 57.482 50.000 9.73 2.83 44.05 4.70
623 640 2.417339 TGCGCTAGGCTCGTATAAAG 57.583 50.000 9.73 0.00 44.05 1.85
638 655 4.393990 CGTATAAAGGCCGGAGAAGTTTTT 59.606 41.667 5.05 0.00 0.00 1.94
666 683 0.899717 TGAAGCAAAGTGATGGGGGC 60.900 55.000 0.00 0.00 0.00 5.80
673 690 2.149973 AAGTGATGGGGGCAGATTTC 57.850 50.000 0.00 0.00 0.00 2.17
690 707 7.329471 GGCAGATTTCAAAAATACTCCAAACTC 59.671 37.037 0.00 0.00 0.00 3.01
704 721 1.002366 AAACTCATCTCGCATGCGTC 58.998 50.000 36.50 0.00 40.74 5.19
716 733 2.541346 CGCATGCGTCAGATACAAATCT 59.459 45.455 31.33 0.00 37.53 2.40
837 857 6.129053 AGTAGTAGCAGTAATACAACCGAC 57.871 41.667 0.00 0.00 33.05 4.79
876 896 0.314302 CCGAGGTGGACGATGGATAC 59.686 60.000 0.00 0.00 42.00 2.24
893 913 1.592400 TACACTCCAAGGCGTCTCCG 61.592 60.000 0.00 0.00 40.77 4.63
1112 1145 4.129737 TCCTACGCGCTGCACCTC 62.130 66.667 5.73 0.00 0.00 3.85
1295 1701 2.428085 GGAGGAAGGCGAGGAGGAC 61.428 68.421 0.00 0.00 0.00 3.85
1528 1952 2.631418 TCAGTAGTTCAGTGCGCTAC 57.369 50.000 9.73 5.32 36.33 3.58
1553 1979 0.828022 AGTTCGTCAGTGGTGGTGAA 59.172 50.000 0.00 0.00 0.00 3.18
1620 2048 2.042639 ATCCCATTGTGGCCCAGC 60.043 61.111 0.00 0.00 35.79 4.85
1658 2095 2.975410 TCCTATTCGCATACCGTACG 57.025 50.000 8.69 8.69 38.35 3.67
1739 2177 1.457346 GGGAAATGTGTCCAGCTCAG 58.543 55.000 0.00 0.00 39.70 3.35
1861 2302 1.408702 GGCCTCACTTGCAGTTTTGAA 59.591 47.619 0.00 0.00 0.00 2.69
1874 2315 4.677779 GCAGTTTTGAACACTGAACACCAT 60.678 41.667 15.07 0.00 43.90 3.55
1902 2354 5.865552 ACATGTTGTAATCTGCAAGCAATTC 59.134 36.000 0.00 0.00 0.00 2.17
1911 2363 0.896923 GCAAGCAATTCCCCATGACA 59.103 50.000 0.00 0.00 0.00 3.58
2106 2562 6.475727 CAGATTCCAAAAATGATGATGCTGTC 59.524 38.462 0.00 0.00 0.00 3.51
2276 2732 6.295462 AAGTGGATCTTTGAATGGAAACATGG 60.295 38.462 0.00 0.00 41.35 3.66
2533 2992 7.759886 TGTCTGTACTTGATAGACTAACATTGC 59.240 37.037 10.58 0.00 44.49 3.56
2754 3213 5.734855 TGCTTTTTCGCCTTATATCTGTC 57.265 39.130 0.00 0.00 0.00 3.51
2849 3308 0.901114 AGTGCATGCCATCTTTGCCA 60.901 50.000 16.68 0.00 35.51 4.92
2939 3398 7.751047 TTATAGCTAGTGTTCTTTGCTTACG 57.249 36.000 0.00 0.00 35.31 3.18
2974 3433 7.526608 TCTTGTACTTATTCTTGATTTTGCCG 58.473 34.615 0.00 0.00 0.00 5.69
3180 3639 7.425224 AGTAAGTGCATTTCTCTAGGTATGT 57.575 36.000 0.00 0.00 0.00 2.29
3218 3677 7.229506 GGCTACACATATATCTGCTTTCCTTTT 59.770 37.037 0.00 0.00 0.00 2.27
3256 3715 3.679389 TCCCTTCTTTCAGCATCACTTC 58.321 45.455 0.00 0.00 0.00 3.01
3484 3943 0.758734 CTGCTGGGGATATCCGAACA 59.241 55.000 15.69 12.83 36.71 3.18
3694 4153 5.069516 ACATTGACCTCTGTTTTCATGCTTT 59.930 36.000 0.00 0.00 0.00 3.51
3906 4365 3.910627 AGGTACATCCACTTCCTTCTTGT 59.089 43.478 0.00 0.00 39.02 3.16
4082 4544 7.699878 ACTGGGTAACTGAAATCCTTTATCTT 58.300 34.615 0.00 0.00 0.00 2.40
4330 4806 4.672587 TGCCTGAATGTGTATACTCTCC 57.327 45.455 4.17 0.00 0.00 3.71
4408 4884 3.055094 AGAATCACCGCCAACATAGACTT 60.055 43.478 0.00 0.00 0.00 3.01
4696 5174 6.944862 ACTCCAATTATCTTTATCAGATGGCC 59.055 38.462 0.00 0.00 42.76 5.36
4768 5246 7.230108 CAGATGGCAAGTTGGATAGTGAATAAT 59.770 37.037 4.75 0.00 0.00 1.28
4833 5311 4.180057 GCTCTATGTTGTCCTCTTCAGTG 58.820 47.826 0.00 0.00 0.00 3.66
5060 5540 3.907474 TCCAGAACCTCCTTGACAACATA 59.093 43.478 0.00 0.00 0.00 2.29
5155 5635 9.555727 GGTCAGTGGAAGCACTTTATATATTTA 57.444 33.333 0.00 0.00 32.26 1.40
5338 5821 5.763204 GTGGACAATCTTGAGAAAGTTACCA 59.237 40.000 0.00 0.00 0.00 3.25
5352 5835 4.837093 AGTTACCAGCCTGCAGTATAAA 57.163 40.909 13.81 0.00 0.00 1.40
5358 5841 3.119495 CCAGCCTGCAGTATAAAAACCAC 60.119 47.826 13.81 0.00 0.00 4.16
5360 5843 2.159435 GCCTGCAGTATAAAAACCACCG 60.159 50.000 13.81 0.00 0.00 4.94
5369 5852 0.106918 AAAAACCACCGGTCAGCAGA 60.107 50.000 2.59 0.00 33.12 4.26
5372 5855 0.981183 AACCACCGGTCAGCAGAATA 59.019 50.000 2.59 0.00 33.12 1.75
5401 5884 2.797177 ATTTCTTCCACTGAGAGGGC 57.203 50.000 0.00 0.00 0.00 5.19
5414 5897 4.361429 AGGGCCCCTCCAAGCTCT 62.361 66.667 21.43 0.00 34.05 4.09
5426 5909 1.610038 CCAAGCTCTGTGCATTGACAA 59.390 47.619 4.39 0.00 45.94 3.18
5482 5965 2.353889 CTCCAGCCATCATTGTTTCTCG 59.646 50.000 0.00 0.00 0.00 4.04
5664 6147 9.180678 CACACTGAACAAGGTAATAACATTTTC 57.819 33.333 0.00 0.00 0.00 2.29
5665 6148 8.357402 ACACTGAACAAGGTAATAACATTTTCC 58.643 33.333 0.00 0.00 0.00 3.13
5671 6154 3.951680 AGGTAATAACATTTTCCGCCCAG 59.048 43.478 0.00 0.00 0.00 4.45
5695 6187 9.626045 CAGATCTCCTGGTGTTTTTATTAAAAC 57.374 33.333 12.07 12.07 43.84 2.43
5715 6207 6.436843 AAACTGAAAAGTAACACACAGAGG 57.563 37.500 0.00 0.00 0.00 3.69
5716 6208 4.451900 ACTGAAAAGTAACACACAGAGGG 58.548 43.478 0.00 0.00 0.00 4.30
5717 6209 4.163458 ACTGAAAAGTAACACACAGAGGGA 59.837 41.667 0.00 0.00 0.00 4.20
5718 6210 5.163195 ACTGAAAAGTAACACACAGAGGGAT 60.163 40.000 0.00 0.00 0.00 3.85
5741 6233 4.395854 TCATTTTGTATGCAGCTTCGTGAT 59.604 37.500 0.00 0.00 0.00 3.06
5804 6296 4.081420 GGAGAGGTATACCCATACTGCATG 60.081 50.000 18.65 0.00 37.70 4.06
5805 6297 4.752063 AGAGGTATACCCATACTGCATGA 58.248 43.478 18.65 0.00 37.70 3.07
5807 6299 5.423610 AGAGGTATACCCATACTGCATGATC 59.576 44.000 18.65 4.70 37.70 2.92
5809 6301 5.188555 AGGTATACCCATACTGCATGATCTG 59.811 44.000 18.65 0.00 37.70 2.90
5813 6305 3.711190 ACCCATACTGCATGATCTGTACA 59.289 43.478 0.00 0.00 36.69 2.90
5819 6436 7.874528 CCATACTGCATGATCTGTACATTTCTA 59.125 37.037 0.00 0.00 36.69 2.10
5824 6441 7.922837 TGCATGATCTGTACATTTCTACATTG 58.077 34.615 0.00 0.00 0.00 2.82
5836 6453 6.545666 ACATTTCTACATTGGACTTGAACACA 59.454 34.615 0.00 0.00 0.00 3.72
5929 6546 2.799126 TATTGCTCACGGGGTGAATT 57.201 45.000 0.00 0.00 42.26 2.17
5940 6557 4.760204 CACGGGGTGAATTTAAAGAAGTCT 59.240 41.667 0.00 0.00 35.23 3.24
5993 6610 7.315890 GCTCAGGTTAGCATTGTTATTTTCTT 58.684 34.615 0.00 0.00 42.30 2.52
6004 6621 9.249844 GCATTGTTATTTTCTTTGTATTTTCGC 57.750 29.630 0.00 0.00 0.00 4.70
6013 6630 7.795431 TTCTTTGTATTTTCGCATGACATTC 57.205 32.000 0.00 0.00 0.00 2.67
6016 6633 8.081633 TCTTTGTATTTTCGCATGACATTCTTT 58.918 29.630 0.00 0.00 0.00 2.52
6017 6634 7.565450 TTGTATTTTCGCATGACATTCTTTG 57.435 32.000 0.00 0.00 0.00 2.77
6018 6635 6.907741 TGTATTTTCGCATGACATTCTTTGA 58.092 32.000 0.00 0.00 0.00 2.69
6163 6780 6.171921 CCTGAATGTTTCTCTCTCAACTGAT 58.828 40.000 0.00 0.00 0.00 2.90
6231 6848 1.806542 CAGTGTTGCTGCTTCGGTAAT 59.193 47.619 0.00 0.00 38.52 1.89
6250 6868 1.084018 TTTCCTTTGCTCCCTCCCAT 58.916 50.000 0.00 0.00 0.00 4.00
6289 6909 1.410004 CCACTCGGACCTGCCTAATA 58.590 55.000 0.00 0.00 0.00 0.98
6290 6910 1.971357 CCACTCGGACCTGCCTAATAT 59.029 52.381 0.00 0.00 0.00 1.28
6294 6914 3.181454 ACTCGGACCTGCCTAATATTTGG 60.181 47.826 11.17 11.17 0.00 3.28
6298 6918 3.139077 GACCTGCCTAATATTTGGTCGG 58.861 50.000 15.94 16.79 35.34 4.79
6308 6928 6.317893 CCTAATATTTGGTCGGCTGTTACTTT 59.682 38.462 7.69 0.00 0.00 2.66
6483 7103 1.916506 AGCTCTGGCCTTTCTTTTCC 58.083 50.000 3.32 0.00 39.73 3.13
6522 7142 6.812160 CACACTGGATTGGTAGAAACTACTAC 59.188 42.308 8.48 0.00 41.13 2.73
6531 7151 6.461640 TGGTAGAAACTACTACAAAAGAGGC 58.538 40.000 0.00 0.00 42.91 4.70
6567 7187 2.286365 TCCACCAGACAAATGTTCCC 57.714 50.000 0.00 0.00 0.00 3.97
6588 7208 3.569701 CCCACATTAGGATTGAATTCCGG 59.430 47.826 2.27 0.00 40.94 5.14
6689 7315 4.624882 TGTTCCGTTGATAATTGCATTTGC 59.375 37.500 4.11 0.00 42.50 3.68
6771 7397 3.045601 ACCAGAAGAAACCGACAGATG 57.954 47.619 0.00 0.00 0.00 2.90
6772 7398 2.632996 ACCAGAAGAAACCGACAGATGA 59.367 45.455 0.00 0.00 0.00 2.92
6773 7399 3.071023 ACCAGAAGAAACCGACAGATGAA 59.929 43.478 0.00 0.00 0.00 2.57
6799 7425 1.208259 GTTGCGGCAGTTTTCAAAGG 58.792 50.000 1.67 0.00 0.00 3.11
6800 7426 1.107114 TTGCGGCAGTTTTCAAAGGA 58.893 45.000 1.67 0.00 0.00 3.36
6812 7438 2.668550 AAAGGAGCCCACGCGTTC 60.669 61.111 10.22 4.12 41.18 3.95
6820 7446 3.499737 CCACGCGTTCCAGGCATC 61.500 66.667 10.22 0.00 0.00 3.91
6872 7498 5.302823 AGGAAGCAAACCTATTATGCAATCC 59.697 40.000 11.53 11.53 43.21 3.01
6960 7586 4.365723 GCAAATGTTAGCATGGAAGGATG 58.634 43.478 0.00 0.00 35.15 3.51
6962 7588 5.735354 GCAAATGTTAGCATGGAAGGATGAG 60.735 44.000 0.00 0.00 35.15 2.90
6963 7589 3.565764 TGTTAGCATGGAAGGATGAGG 57.434 47.619 0.00 0.00 0.00 3.86
6964 7590 3.114606 TGTTAGCATGGAAGGATGAGGA 58.885 45.455 0.00 0.00 0.00 3.71
7009 7636 6.922407 CAGTGGAACATAGTACATCAGATCTG 59.078 42.308 17.07 17.07 44.52 2.90
7019 7646 0.306228 ATCAGATCTGTCGTCGCTCG 59.694 55.000 21.92 0.00 41.41 5.03
7049 7676 7.517417 GCTCGATACATCAAATTAGTGACCTTG 60.517 40.741 0.00 0.00 0.00 3.61
7070 7700 8.515414 ACCTTGAGAATAAACTTGTATCTTTGC 58.485 33.333 0.00 0.00 0.00 3.68
7071 7701 8.734386 CCTTGAGAATAAACTTGTATCTTTGCT 58.266 33.333 0.00 0.00 0.00 3.91
7081 7711 8.635765 AACTTGTATCTTTGCTTTTATCCAGA 57.364 30.769 0.00 0.00 0.00 3.86
7082 7712 8.814038 ACTTGTATCTTTGCTTTTATCCAGAT 57.186 30.769 0.00 0.00 0.00 2.90
7184 7816 9.623000 TTGGATTGATATCATGCAGGATATTAG 57.377 33.333 28.91 0.00 39.85 1.73
7185 7817 8.775151 TGGATTGATATCATGCAGGATATTAGT 58.225 33.333 28.91 22.89 39.85 2.24
7186 7818 9.624373 GGATTGATATCATGCAGGATATTAGTT 57.376 33.333 28.91 18.21 39.85 2.24
7188 7820 7.854557 TGATATCATGCAGGATATTAGTTGC 57.145 36.000 28.91 17.91 39.85 4.17
7192 7824 3.643199 TGCAGGATATTAGTTGCACCA 57.357 42.857 0.00 0.00 41.23 4.17
7193 7825 3.961849 TGCAGGATATTAGTTGCACCAA 58.038 40.909 0.00 0.00 41.23 3.67
7201 7863 8.761689 AGGATATTAGTTGCACCAATTTTTGAT 58.238 29.630 0.00 0.00 0.00 2.57
7202 7864 8.819974 GGATATTAGTTGCACCAATTTTTGATG 58.180 33.333 0.00 0.00 0.00 3.07
7212 7874 8.415553 TGCACCAATTTTTGATGAGATATTAGG 58.584 33.333 0.00 0.00 0.00 2.69
7213 7875 8.416329 GCACCAATTTTTGATGAGATATTAGGT 58.584 33.333 0.00 0.00 0.00 3.08
7214 7876 9.740239 CACCAATTTTTGATGAGATATTAGGTG 57.260 33.333 0.00 0.00 34.15 4.00
7215 7877 9.479549 ACCAATTTTTGATGAGATATTAGGTGT 57.520 29.630 0.00 0.00 0.00 4.16
7223 7885 9.440773 TTGATGAGATATTAGGTGTATGATTGC 57.559 33.333 0.00 0.00 0.00 3.56
7224 7886 8.043113 TGATGAGATATTAGGTGTATGATTGCC 58.957 37.037 0.00 0.00 0.00 4.52
7225 7887 7.315066 TGAGATATTAGGTGTATGATTGCCA 57.685 36.000 0.00 0.00 0.00 4.92
7226 7888 7.921304 TGAGATATTAGGTGTATGATTGCCAT 58.079 34.615 0.00 0.00 39.25 4.40
7227 7889 7.825761 TGAGATATTAGGTGTATGATTGCCATG 59.174 37.037 0.00 0.00 36.71 3.66
7228 7890 6.600822 AGATATTAGGTGTATGATTGCCATGC 59.399 38.462 0.00 0.00 38.21 4.06
7229 7891 2.440517 AGGTGTATGATTGCCATGCA 57.559 45.000 0.00 0.00 43.95 3.96
7230 7892 2.304092 AGGTGTATGATTGCCATGCAG 58.696 47.619 0.00 0.00 46.14 4.41
7231 7893 1.338973 GGTGTATGATTGCCATGCAGG 59.661 52.381 0.00 0.00 46.14 4.85
7232 7894 2.300433 GTGTATGATTGCCATGCAGGA 58.700 47.619 0.00 0.00 46.14 3.86
7233 7895 2.889045 GTGTATGATTGCCATGCAGGAT 59.111 45.455 0.00 0.00 46.14 3.24
7234 7896 2.888414 TGTATGATTGCCATGCAGGATG 59.112 45.455 0.00 0.00 41.84 3.51
7260 7922 0.509929 GTTTGGTGTCGGTTAGCGTC 59.490 55.000 3.21 0.00 0.00 5.19
7380 8042 3.053917 TGGAACAGGCCCCTCTTAATTAC 60.054 47.826 0.00 0.00 0.00 1.89
7411 8073 3.818787 GTGATGCAAGCTGGCCGG 61.819 66.667 11.50 7.41 0.00 6.13
7417 8079 4.431131 CAAGCTGGCCGGTCCCAT 62.431 66.667 14.55 0.00 33.64 4.00
7473 8151 2.378634 CCCCCACCCCTCACTCATC 61.379 68.421 0.00 0.00 0.00 2.92
7479 8157 1.757118 CACCCCTCACTCATCATACGT 59.243 52.381 0.00 0.00 0.00 3.57
7537 8215 3.128068 GGTTGGTGTCTCGAACAAAACTT 59.872 43.478 17.16 0.00 40.31 2.66
7538 8216 4.095610 GTTGGTGTCTCGAACAAAACTTG 58.904 43.478 13.86 0.00 40.31 3.16
7550 8228 5.050634 CGAACAAAACTTGATGGAAGTACGA 60.051 40.000 0.00 0.00 44.68 3.43
7561 8239 3.872696 TGGAAGTACGATGATGTTGCAT 58.127 40.909 0.00 0.00 0.00 3.96
7584 8262 3.270027 CATGACGCTGGTTAGGAAATGA 58.730 45.455 0.00 0.00 0.00 2.57
7585 8263 3.627395 TGACGCTGGTTAGGAAATGAT 57.373 42.857 0.00 0.00 0.00 2.45
7586 8264 3.531538 TGACGCTGGTTAGGAAATGATC 58.468 45.455 0.00 0.00 0.00 2.92
7587 8265 2.540101 GACGCTGGTTAGGAAATGATCG 59.460 50.000 0.00 0.00 0.00 3.69
7588 8266 2.167693 ACGCTGGTTAGGAAATGATCGA 59.832 45.455 0.00 0.00 0.00 3.59
7589 8267 2.797156 CGCTGGTTAGGAAATGATCGAG 59.203 50.000 0.00 0.00 0.00 4.04
7590 8268 3.490933 CGCTGGTTAGGAAATGATCGAGA 60.491 47.826 0.00 0.00 0.00 4.04
7591 8269 4.442706 GCTGGTTAGGAAATGATCGAGAA 58.557 43.478 0.00 0.00 0.00 2.87
7592 8270 4.876107 GCTGGTTAGGAAATGATCGAGAAA 59.124 41.667 0.00 0.00 0.00 2.52
7593 8271 5.529060 GCTGGTTAGGAAATGATCGAGAAAT 59.471 40.000 0.00 0.00 0.00 2.17
7594 8272 6.038714 GCTGGTTAGGAAATGATCGAGAAATT 59.961 38.462 0.00 0.00 0.00 1.82
7595 8273 7.320443 TGGTTAGGAAATGATCGAGAAATTG 57.680 36.000 0.00 0.00 0.00 2.32
7596 8274 6.318648 TGGTTAGGAAATGATCGAGAAATTGG 59.681 38.462 0.00 0.00 0.00 3.16
7597 8275 6.318900 GGTTAGGAAATGATCGAGAAATTGGT 59.681 38.462 0.00 0.00 0.00 3.67
7598 8276 7.148069 GGTTAGGAAATGATCGAGAAATTGGTT 60.148 37.037 0.00 0.00 0.00 3.67
7599 8277 6.199937 AGGAAATGATCGAGAAATTGGTTG 57.800 37.500 0.00 0.00 0.00 3.77
7600 8278 5.126061 AGGAAATGATCGAGAAATTGGTTGG 59.874 40.000 0.00 0.00 0.00 3.77
7601 8279 5.125417 GGAAATGATCGAGAAATTGGTTGGA 59.875 40.000 0.00 0.00 0.00 3.53
7602 8280 6.350110 GGAAATGATCGAGAAATTGGTTGGAA 60.350 38.462 0.00 0.00 0.00 3.53
7603 8281 6.588719 AATGATCGAGAAATTGGTTGGAAA 57.411 33.333 0.00 0.00 0.00 3.13
7604 8282 6.588719 ATGATCGAGAAATTGGTTGGAAAA 57.411 33.333 0.00 0.00 0.00 2.29
7605 8283 6.588719 TGATCGAGAAATTGGTTGGAAAAT 57.411 33.333 0.00 0.00 0.00 1.82
7606 8284 6.389091 TGATCGAGAAATTGGTTGGAAAATG 58.611 36.000 0.00 0.00 0.00 2.32
7611 8289 6.308766 CGAGAAATTGGTTGGAAAATGATGAC 59.691 38.462 0.00 0.00 0.00 3.06
7643 8321 3.550431 ATGATGGGGACTCGCCGG 61.550 66.667 0.00 0.00 39.47 6.13
7644 8322 4.770362 TGATGGGGACTCGCCGGA 62.770 66.667 5.05 0.00 39.47 5.14
7645 8323 3.917760 GATGGGGACTCGCCGGAG 61.918 72.222 5.05 0.00 46.13 4.63
7646 8324 4.458829 ATGGGGACTCGCCGGAGA 62.459 66.667 5.05 6.70 43.27 3.71
7647 8325 3.976490 ATGGGGACTCGCCGGAGAA 62.976 63.158 9.83 0.00 43.27 2.87
7648 8326 3.387947 GGGGACTCGCCGGAGAAA 61.388 66.667 9.83 0.00 43.27 2.52
7649 8327 2.125633 GGGACTCGCCGGAGAAAC 60.126 66.667 9.83 6.06 43.27 2.78
7650 8328 2.647158 GGGACTCGCCGGAGAAACT 61.647 63.158 9.83 0.00 43.27 2.66
7680 8358 2.795175 TCACGTCACCTGTCTTCTTC 57.205 50.000 0.00 0.00 0.00 2.87
7681 8359 1.001706 TCACGTCACCTGTCTTCTTCG 60.002 52.381 0.00 0.00 0.00 3.79
7683 8361 1.269102 ACGTCACCTGTCTTCTTCGTG 60.269 52.381 0.00 0.00 0.00 4.35
7684 8362 1.784525 GTCACCTGTCTTCTTCGTGG 58.215 55.000 0.00 0.00 0.00 4.94
7685 8363 0.679505 TCACCTGTCTTCTTCGTGGG 59.320 55.000 0.00 0.00 0.00 4.61
7686 8364 0.320771 CACCTGTCTTCTTCGTGGGG 60.321 60.000 0.00 0.00 0.00 4.96
7687 8365 0.763223 ACCTGTCTTCTTCGTGGGGT 60.763 55.000 0.00 0.00 0.00 4.95
7688 8366 1.263356 CCTGTCTTCTTCGTGGGGTA 58.737 55.000 0.00 0.00 0.00 3.69
7689 8367 1.831736 CCTGTCTTCTTCGTGGGGTAT 59.168 52.381 0.00 0.00 0.00 2.73
7690 8368 2.159085 CCTGTCTTCTTCGTGGGGTATC 60.159 54.545 0.00 0.00 0.00 2.24
7691 8369 1.829222 TGTCTTCTTCGTGGGGTATCC 59.171 52.381 0.00 0.00 0.00 2.59
7692 8370 1.108776 TCTTCTTCGTGGGGTATCCG 58.891 55.000 0.00 0.00 38.76 4.18
7694 8372 1.206371 CTTCTTCGTGGGGTATCCGTT 59.794 52.381 0.00 0.00 38.76 4.44
7695 8373 0.819582 TCTTCGTGGGGTATCCGTTC 59.180 55.000 0.00 0.00 38.76 3.95
7697 8375 0.819582 TTCGTGGGGTATCCGTTCTC 59.180 55.000 0.00 0.00 38.76 2.87
7698 8376 1.039233 TCGTGGGGTATCCGTTCTCC 61.039 60.000 0.00 0.00 38.76 3.71
7699 8377 1.324740 CGTGGGGTATCCGTTCTCCA 61.325 60.000 0.00 0.00 38.76 3.86
7700 8378 1.129058 GTGGGGTATCCGTTCTCCAT 58.871 55.000 0.00 0.00 38.76 3.41
7701 8379 2.322658 GTGGGGTATCCGTTCTCCATA 58.677 52.381 0.00 0.00 38.76 2.74
7702 8380 2.904434 GTGGGGTATCCGTTCTCCATAT 59.096 50.000 0.00 0.00 38.76 1.78
7703 8381 4.091549 GTGGGGTATCCGTTCTCCATATA 58.908 47.826 0.00 0.00 38.76 0.86
7704 8382 4.081807 GTGGGGTATCCGTTCTCCATATAC 60.082 50.000 0.00 0.00 38.76 1.47
7705 8383 4.202749 TGGGGTATCCGTTCTCCATATACT 60.203 45.833 0.00 0.00 38.76 2.12
7714 8413 8.595362 TCCGTTCTCCATATACTATCATTGAT 57.405 34.615 4.28 4.28 0.00 2.57
7719 8418 8.899887 TCTCCATATACTATCATTGATCCACA 57.100 34.615 1.55 0.00 0.00 4.17
7747 8452 5.738619 AAAACAGGAATAATGACCCAACC 57.261 39.130 0.00 0.00 0.00 3.77
7754 8459 5.968167 AGGAATAATGACCCAACCACTAGTA 59.032 40.000 0.00 0.00 0.00 1.82
7755 8460 6.099845 AGGAATAATGACCCAACCACTAGTAG 59.900 42.308 0.00 0.00 0.00 2.57
7756 8461 6.126854 GGAATAATGACCCAACCACTAGTAGT 60.127 42.308 0.00 0.00 0.00 2.73
7760 8469 2.097825 ACCCAACCACTAGTAGTAGCG 58.902 52.381 1.57 0.00 0.00 4.26
7765 8474 0.384669 CCACTAGTAGTAGCGGTGGC 59.615 60.000 1.57 0.00 40.44 5.01
7768 8477 1.456331 TAGTAGTAGCGGTGGCCCC 60.456 63.158 0.00 0.00 41.24 5.80
7772 8481 0.779358 TAGTAGCGGTGGCCCCTATA 59.221 55.000 0.00 0.00 41.24 1.31
7776 8485 3.148084 CGGTGGCCCCTATACCTG 58.852 66.667 0.00 0.00 32.28 4.00
7777 8486 2.836888 GGTGGCCCCTATACCTGC 59.163 66.667 0.00 0.00 0.00 4.85
7795 8504 3.005554 CTGCTTCACCTTTCATCATCGT 58.994 45.455 0.00 0.00 0.00 3.73
7796 8505 2.743664 TGCTTCACCTTTCATCATCGTG 59.256 45.455 0.00 0.00 0.00 4.35
7797 8506 2.476854 GCTTCACCTTTCATCATCGTGC 60.477 50.000 0.00 0.00 0.00 5.34
7798 8507 2.768253 TCACCTTTCATCATCGTGCT 57.232 45.000 0.00 0.00 0.00 4.40
7799 8508 2.621338 TCACCTTTCATCATCGTGCTC 58.379 47.619 0.00 0.00 0.00 4.26
7800 8509 1.325640 CACCTTTCATCATCGTGCTCG 59.674 52.381 0.81 0.81 38.55 5.03
7805 8514 2.583319 ATCATCGTGCTCGTGCCG 60.583 61.111 7.05 10.11 38.71 5.69
7822 8531 1.497278 CGCTCCATCCAAACACACG 59.503 57.895 0.00 0.00 0.00 4.49
7834 8544 1.772063 AACACACGTTTGCGAGCCTC 61.772 55.000 0.61 0.00 42.00 4.70
7902 8612 4.448537 TGGTTGGTCACACAAAGAAAAG 57.551 40.909 0.00 0.00 31.17 2.27
7904 8614 4.524714 TGGTTGGTCACACAAAGAAAAGAA 59.475 37.500 0.00 0.00 31.17 2.52
7906 8616 5.929415 GGTTGGTCACACAAAGAAAAGAAAA 59.071 36.000 0.00 0.00 31.17 2.29
7930 8640 7.718334 AAAAGAGAAAACCCAGAAGAAAAGA 57.282 32.000 0.00 0.00 0.00 2.52
7931 8641 7.718334 AAAGAGAAAACCCAGAAGAAAAGAA 57.282 32.000 0.00 0.00 0.00 2.52
7932 8642 7.718334 AAGAGAAAACCCAGAAGAAAAGAAA 57.282 32.000 0.00 0.00 0.00 2.52
7933 8643 7.340122 AGAGAAAACCCAGAAGAAAAGAAAG 57.660 36.000 0.00 0.00 0.00 2.62
7934 8644 7.119387 AGAGAAAACCCAGAAGAAAAGAAAGA 58.881 34.615 0.00 0.00 0.00 2.52
7935 8645 7.615757 AGAGAAAACCCAGAAGAAAAGAAAGAA 59.384 33.333 0.00 0.00 0.00 2.52
7936 8646 8.134202 AGAAAACCCAGAAGAAAAGAAAGAAA 57.866 30.769 0.00 0.00 0.00 2.52
7937 8647 8.035394 AGAAAACCCAGAAGAAAAGAAAGAAAC 58.965 33.333 0.00 0.00 0.00 2.78
7941 8651 7.323420 ACCCAGAAGAAAAGAAAGAAACAAAG 58.677 34.615 0.00 0.00 0.00 2.77
7942 8652 7.178451 ACCCAGAAGAAAAGAAAGAAACAAAGA 59.822 33.333 0.00 0.00 0.00 2.52
7944 8654 9.080915 CCAGAAGAAAAGAAAGAAACAAAGAAG 57.919 33.333 0.00 0.00 0.00 2.85
7958 8670 8.432805 AGAAACAAAGAAGGAAGATCAGTAGAA 58.567 33.333 0.00 0.00 0.00 2.10
7965 8677 4.810790 AGGAAGATCAGTAGAACACAACG 58.189 43.478 0.00 0.00 0.00 4.10
7966 8678 3.927142 GGAAGATCAGTAGAACACAACGG 59.073 47.826 0.00 0.00 0.00 4.44
7968 8680 2.299013 AGATCAGTAGAACACAACGGCA 59.701 45.455 0.00 0.00 0.00 5.69
7970 8682 3.120321 TCAGTAGAACACAACGGCAAT 57.880 42.857 0.00 0.00 0.00 3.56
7971 8683 2.805671 TCAGTAGAACACAACGGCAATG 59.194 45.455 0.00 0.00 0.00 2.82
7972 8684 2.095768 CAGTAGAACACAACGGCAATGG 60.096 50.000 0.00 0.00 0.00 3.16
7973 8685 0.878416 TAGAACACAACGGCAATGGC 59.122 50.000 0.00 0.00 40.13 4.40
7974 8686 0.823356 AGAACACAACGGCAATGGCT 60.823 50.000 5.02 0.00 40.87 4.75
7975 8687 0.878416 GAACACAACGGCAATGGCTA 59.122 50.000 5.02 0.00 40.87 3.93
7979 8691 2.080693 CACAACGGCAATGGCTACTAA 58.919 47.619 5.02 0.00 40.87 2.24
7980 8692 2.682856 CACAACGGCAATGGCTACTAAT 59.317 45.455 5.02 0.00 40.87 1.73
7981 8693 3.874543 CACAACGGCAATGGCTACTAATA 59.125 43.478 5.02 0.00 40.87 0.98
7982 8694 4.334203 CACAACGGCAATGGCTACTAATAA 59.666 41.667 5.02 0.00 40.87 1.40
7983 8695 5.008613 CACAACGGCAATGGCTACTAATAAT 59.991 40.000 5.02 0.00 40.87 1.28
7984 8696 5.238650 ACAACGGCAATGGCTACTAATAATC 59.761 40.000 5.02 0.00 40.87 1.75
7985 8697 4.968259 ACGGCAATGGCTACTAATAATCA 58.032 39.130 5.02 0.00 40.87 2.57
7986 8698 4.997395 ACGGCAATGGCTACTAATAATCAG 59.003 41.667 5.02 0.00 40.87 2.90
7987 8699 4.393062 CGGCAATGGCTACTAATAATCAGG 59.607 45.833 5.02 0.00 40.87 3.86
7988 8700 4.156739 GGCAATGGCTACTAATAATCAGGC 59.843 45.833 0.00 0.00 40.87 4.85
7989 8701 5.006386 GCAATGGCTACTAATAATCAGGCT 58.994 41.667 0.00 0.00 36.96 4.58
7990 8702 6.173339 GCAATGGCTACTAATAATCAGGCTA 58.827 40.000 0.00 0.00 36.96 3.93
7991 8703 6.825721 GCAATGGCTACTAATAATCAGGCTAT 59.174 38.462 0.00 0.00 36.96 2.97
7992 8704 7.201679 GCAATGGCTACTAATAATCAGGCTATG 60.202 40.741 0.00 0.00 36.96 2.23
7993 8705 5.734720 TGGCTACTAATAATCAGGCTATGC 58.265 41.667 0.00 0.00 34.84 3.14
7994 8706 5.485353 TGGCTACTAATAATCAGGCTATGCT 59.515 40.000 0.00 0.00 34.84 3.79
7995 8707 6.667848 TGGCTACTAATAATCAGGCTATGCTA 59.332 38.462 0.00 0.00 34.84 3.49
7996 8708 6.981559 GGCTACTAATAATCAGGCTATGCTAC 59.018 42.308 0.00 0.00 0.00 3.58
7997 8709 7.363880 GGCTACTAATAATCAGGCTATGCTACA 60.364 40.741 0.00 0.00 0.00 2.74
8018 8736 4.714555 ACGACGACGACGACTGCG 62.715 66.667 25.15 13.36 42.66 5.18
8020 8738 4.081030 GACGACGACGACTGCGGA 62.081 66.667 15.32 0.00 43.17 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.601576 AACGTGTGATAAGCGCCACA 60.602 50.000 12.35 12.35 40.56 4.17
2 3 0.094730 GAACGTGTGATAAGCGCCAC 59.905 55.000 2.29 5.55 0.00 5.01
3 4 0.037697 AGAACGTGTGATAAGCGCCA 60.038 50.000 2.29 0.00 0.00 5.69
4 5 0.645868 GAGAACGTGTGATAAGCGCC 59.354 55.000 2.29 0.00 0.00 6.53
5 6 1.584308 GAGAGAACGTGTGATAAGCGC 59.416 52.381 0.00 0.00 0.00 5.92
6 7 2.863739 TGAGAGAACGTGTGATAAGCG 58.136 47.619 0.00 0.00 0.00 4.68
7 8 6.887376 TTAATGAGAGAACGTGTGATAAGC 57.113 37.500 0.00 0.00 0.00 3.09
8 9 7.394872 GCTTTAATGAGAGAACGTGTGATAAG 58.605 38.462 0.00 0.00 0.00 1.73
9 10 6.034577 CGCTTTAATGAGAGAACGTGTGATAA 59.965 38.462 0.00 0.00 0.00 1.75
10 11 5.515270 CGCTTTAATGAGAGAACGTGTGATA 59.485 40.000 0.00 0.00 0.00 2.15
11 12 4.327357 CGCTTTAATGAGAGAACGTGTGAT 59.673 41.667 0.00 0.00 0.00 3.06
12 13 3.673338 CGCTTTAATGAGAGAACGTGTGA 59.327 43.478 0.00 0.00 0.00 3.58
13 14 3.722082 GCGCTTTAATGAGAGAACGTGTG 60.722 47.826 0.00 0.00 0.00 3.82
14 15 2.412089 GCGCTTTAATGAGAGAACGTGT 59.588 45.455 0.00 0.00 0.00 4.49
15 16 2.411748 TGCGCTTTAATGAGAGAACGTG 59.588 45.455 9.73 0.00 0.00 4.49
16 17 2.683968 TGCGCTTTAATGAGAGAACGT 58.316 42.857 9.73 0.00 0.00 3.99
17 18 3.933155 ATGCGCTTTAATGAGAGAACG 57.067 42.857 9.73 0.00 0.00 3.95
18 19 5.476752 AGAATGCGCTTTAATGAGAGAAC 57.523 39.130 9.73 0.00 0.00 3.01
19 20 6.425114 GGATAGAATGCGCTTTAATGAGAGAA 59.575 38.462 9.73 0.00 0.00 2.87
20 21 5.928839 GGATAGAATGCGCTTTAATGAGAGA 59.071 40.000 9.73 0.00 0.00 3.10
21 22 5.121454 GGGATAGAATGCGCTTTAATGAGAG 59.879 44.000 9.73 0.00 0.00 3.20
22 23 4.997395 GGGATAGAATGCGCTTTAATGAGA 59.003 41.667 9.73 0.00 0.00 3.27
23 24 4.756642 TGGGATAGAATGCGCTTTAATGAG 59.243 41.667 9.73 0.00 0.00 2.90
24 25 4.713553 TGGGATAGAATGCGCTTTAATGA 58.286 39.130 9.73 0.00 0.00 2.57
25 26 5.633830 ATGGGATAGAATGCGCTTTAATG 57.366 39.130 9.73 0.00 0.00 1.90
26 27 5.536161 ACAATGGGATAGAATGCGCTTTAAT 59.464 36.000 9.73 6.01 0.00 1.40
27 28 4.887071 ACAATGGGATAGAATGCGCTTTAA 59.113 37.500 9.73 0.64 0.00 1.52
28 29 4.460263 ACAATGGGATAGAATGCGCTTTA 58.540 39.130 9.73 0.00 0.00 1.85
29 30 3.290710 ACAATGGGATAGAATGCGCTTT 58.709 40.909 9.73 9.03 0.00 3.51
30 31 2.936202 ACAATGGGATAGAATGCGCTT 58.064 42.857 9.73 0.00 0.00 4.68
31 32 2.645838 ACAATGGGATAGAATGCGCT 57.354 45.000 9.73 0.00 0.00 5.92
32 33 3.127548 CCATACAATGGGATAGAATGCGC 59.872 47.826 0.00 0.00 46.86 6.09
33 34 4.952262 CCATACAATGGGATAGAATGCG 57.048 45.455 0.00 0.00 46.86 4.73
45 46 9.396022 ACTAACTTTTACCAGATCCATACAATG 57.604 33.333 0.00 0.00 0.00 2.82
46 47 9.396022 CACTAACTTTTACCAGATCCATACAAT 57.604 33.333 0.00 0.00 0.00 2.71
47 48 7.335924 GCACTAACTTTTACCAGATCCATACAA 59.664 37.037 0.00 0.00 0.00 2.41
48 49 6.821665 GCACTAACTTTTACCAGATCCATACA 59.178 38.462 0.00 0.00 0.00 2.29
49 50 7.011482 CAGCACTAACTTTTACCAGATCCATAC 59.989 40.741 0.00 0.00 0.00 2.39
50 51 7.047891 CAGCACTAACTTTTACCAGATCCATA 58.952 38.462 0.00 0.00 0.00 2.74
51 52 5.882557 CAGCACTAACTTTTACCAGATCCAT 59.117 40.000 0.00 0.00 0.00 3.41
52 53 5.245531 CAGCACTAACTTTTACCAGATCCA 58.754 41.667 0.00 0.00 0.00 3.41
53 54 4.636206 CCAGCACTAACTTTTACCAGATCC 59.364 45.833 0.00 0.00 0.00 3.36
54 55 4.095036 GCCAGCACTAACTTTTACCAGATC 59.905 45.833 0.00 0.00 0.00 2.75
55 56 4.010349 GCCAGCACTAACTTTTACCAGAT 58.990 43.478 0.00 0.00 0.00 2.90
56 57 3.408634 GCCAGCACTAACTTTTACCAGA 58.591 45.455 0.00 0.00 0.00 3.86
57 58 2.488153 GGCCAGCACTAACTTTTACCAG 59.512 50.000 0.00 0.00 0.00 4.00
58 59 2.510613 GGCCAGCACTAACTTTTACCA 58.489 47.619 0.00 0.00 0.00 3.25
59 60 1.467342 CGGCCAGCACTAACTTTTACC 59.533 52.381 2.24 0.00 0.00 2.85
60 61 2.894307 CGGCCAGCACTAACTTTTAC 57.106 50.000 2.24 0.00 0.00 2.01
73 74 0.879400 GAGACAGATCATGCGGCCAG 60.879 60.000 2.24 0.00 0.00 4.85
74 75 1.144716 GAGACAGATCATGCGGCCA 59.855 57.895 2.24 0.00 0.00 5.36
75 76 1.596477 GGAGACAGATCATGCGGCC 60.596 63.158 0.00 0.00 0.00 6.13
76 77 1.953138 CGGAGACAGATCATGCGGC 60.953 63.158 0.00 0.00 0.00 6.53
77 78 0.179100 AACGGAGACAGATCATGCGG 60.179 55.000 0.00 0.00 0.00 5.69
78 79 1.203928 GAACGGAGACAGATCATGCG 58.796 55.000 0.00 0.00 0.00 4.73
79 80 1.137872 AGGAACGGAGACAGATCATGC 59.862 52.381 0.00 0.00 0.00 4.06
80 81 2.692557 AGAGGAACGGAGACAGATCATG 59.307 50.000 0.00 0.00 0.00 3.07
81 82 2.955660 GAGAGGAACGGAGACAGATCAT 59.044 50.000 0.00 0.00 0.00 2.45
82 83 2.025793 AGAGAGGAACGGAGACAGATCA 60.026 50.000 0.00 0.00 0.00 2.92
83 84 2.357637 CAGAGAGGAACGGAGACAGATC 59.642 54.545 0.00 0.00 0.00 2.75
84 85 2.025793 TCAGAGAGGAACGGAGACAGAT 60.026 50.000 0.00 0.00 0.00 2.90
85 86 1.351350 TCAGAGAGGAACGGAGACAGA 59.649 52.381 0.00 0.00 0.00 3.41
86 87 1.827681 TCAGAGAGGAACGGAGACAG 58.172 55.000 0.00 0.00 0.00 3.51
94 95 2.678324 CGGTCAGTTTCAGAGAGGAAC 58.322 52.381 0.00 0.00 0.00 3.62
100 101 0.514691 GCAAGCGGTCAGTTTCAGAG 59.485 55.000 0.00 0.00 0.00 3.35
137 142 2.915463 GTGGACGATGAAACGTGACTAG 59.085 50.000 0.00 0.00 46.52 2.57
139 144 1.340248 AGTGGACGATGAAACGTGACT 59.660 47.619 0.00 0.00 46.52 3.41
159 164 5.960113 ACACAAACTGACAAACAAAGCATA 58.040 33.333 0.00 0.00 0.00 3.14
180 185 1.134753 ACGTGTGTCGAAAGTGGTACA 59.865 47.619 0.00 0.00 42.86 2.90
190 195 1.330213 TCAAACTCGTACGTGTGTCGA 59.670 47.619 22.20 15.64 42.86 4.20
210 216 3.259374 ACACGACTCAGATTTCAGTCCAT 59.741 43.478 0.00 0.00 36.44 3.41
229 235 1.429463 CTTTGCTCGTGGAGGTACAC 58.571 55.000 0.00 0.00 37.99 2.90
285 292 1.378531 TGCGGGAAATCAGTATGCAC 58.621 50.000 0.00 0.00 34.76 4.57
287 294 2.031682 GTCATGCGGGAAATCAGTATGC 60.032 50.000 0.00 0.00 34.76 3.14
288 295 3.205338 TGTCATGCGGGAAATCAGTATG 58.795 45.455 0.00 0.00 37.54 2.39
291 298 2.086869 CTTGTCATGCGGGAAATCAGT 58.913 47.619 0.00 0.00 0.00 3.41
293 300 0.810648 GCTTGTCATGCGGGAAATCA 59.189 50.000 0.00 0.00 0.00 2.57
294 301 0.810648 TGCTTGTCATGCGGGAAATC 59.189 50.000 6.26 0.00 0.00 2.17
296 303 1.255882 AATGCTTGTCATGCGGGAAA 58.744 45.000 6.26 0.00 35.13 3.13
297 304 1.255882 AAATGCTTGTCATGCGGGAA 58.744 45.000 6.26 0.00 35.13 3.97
315 322 7.403312 TCAACTGGAATCTGTTTGAGAAAAA 57.597 32.000 0.00 0.00 33.65 1.94
316 323 7.587037 ATCAACTGGAATCTGTTTGAGAAAA 57.413 32.000 0.00 0.00 33.65 2.29
317 324 7.587037 AATCAACTGGAATCTGTTTGAGAAA 57.413 32.000 0.00 0.00 33.65 2.52
318 325 7.520453 CGAAATCAACTGGAATCTGTTTGAGAA 60.520 37.037 0.00 0.00 33.65 2.87
319 326 6.073058 CGAAATCAACTGGAATCTGTTTGAGA 60.073 38.462 0.00 0.00 33.65 3.27
320 327 6.082338 CGAAATCAACTGGAATCTGTTTGAG 58.918 40.000 0.00 0.00 33.65 3.02
321 328 5.048782 CCGAAATCAACTGGAATCTGTTTGA 60.049 40.000 0.00 0.00 33.65 2.69
322 329 5.156355 CCGAAATCAACTGGAATCTGTTTG 58.844 41.667 0.00 0.00 33.65 2.93
323 330 4.321230 GCCGAAATCAACTGGAATCTGTTT 60.321 41.667 0.00 0.00 33.65 2.83
324 331 3.191371 GCCGAAATCAACTGGAATCTGTT 59.809 43.478 0.00 0.00 35.81 3.16
325 332 2.749621 GCCGAAATCAACTGGAATCTGT 59.250 45.455 0.00 0.00 0.00 3.41
326 333 2.223112 CGCCGAAATCAACTGGAATCTG 60.223 50.000 0.00 0.00 0.00 2.90
327 334 2.009774 CGCCGAAATCAACTGGAATCT 58.990 47.619 0.00 0.00 0.00 2.40
328 335 1.531883 GCGCCGAAATCAACTGGAATC 60.532 52.381 0.00 0.00 0.00 2.52
329 336 0.451783 GCGCCGAAATCAACTGGAAT 59.548 50.000 0.00 0.00 0.00 3.01
330 337 0.605319 AGCGCCGAAATCAACTGGAA 60.605 50.000 2.29 0.00 0.00 3.53
331 338 0.605319 AAGCGCCGAAATCAACTGGA 60.605 50.000 2.29 0.00 0.00 3.86
332 339 0.179189 GAAGCGCCGAAATCAACTGG 60.179 55.000 2.29 0.00 0.00 4.00
333 340 0.516877 TGAAGCGCCGAAATCAACTG 59.483 50.000 2.29 0.00 0.00 3.16
334 341 0.517316 GTGAAGCGCCGAAATCAACT 59.483 50.000 2.29 0.00 0.00 3.16
335 342 0.517316 AGTGAAGCGCCGAAATCAAC 59.483 50.000 2.29 0.00 0.00 3.18
336 343 0.516877 CAGTGAAGCGCCGAAATCAA 59.483 50.000 2.29 0.00 0.00 2.57
337 344 1.911293 GCAGTGAAGCGCCGAAATCA 61.911 55.000 2.29 0.00 0.00 2.57
338 345 1.226128 GCAGTGAAGCGCCGAAATC 60.226 57.895 2.29 0.00 0.00 2.17
339 346 2.870372 GCAGTGAAGCGCCGAAAT 59.130 55.556 2.29 0.00 0.00 2.17
387 394 9.737844 TGCACATTACATGGATATATACACATT 57.262 29.630 0.00 0.00 33.60 2.71
388 395 9.910267 ATGCACATTACATGGATATATACACAT 57.090 29.630 0.00 0.00 33.60 3.21
397 404 9.964303 GAAACAAATATGCACATTACATGGATA 57.036 29.630 0.00 0.00 35.22 2.59
398 405 8.698210 AGAAACAAATATGCACATTACATGGAT 58.302 29.630 0.00 0.00 33.60 3.41
399 406 8.065473 AGAAACAAATATGCACATTACATGGA 57.935 30.769 0.00 0.00 33.60 3.41
400 407 9.970395 ATAGAAACAAATATGCACATTACATGG 57.030 29.630 0.00 0.00 33.60 3.66
416 423 8.952278 ACATTATACTCGCCAAATAGAAACAAA 58.048 29.630 0.00 0.00 0.00 2.83
417 424 8.394877 CACATTATACTCGCCAAATAGAAACAA 58.605 33.333 0.00 0.00 0.00 2.83
418 425 7.551262 ACACATTATACTCGCCAAATAGAAACA 59.449 33.333 0.00 0.00 0.00 2.83
445 452 8.049117 CCCAGTAGCAAATGTACATGGATATAT 58.951 37.037 9.63 0.00 0.00 0.86
446 453 7.394016 CCCAGTAGCAAATGTACATGGATATA 58.606 38.462 9.63 0.00 0.00 0.86
447 454 6.240894 CCCAGTAGCAAATGTACATGGATAT 58.759 40.000 9.63 0.00 0.00 1.63
448 455 5.620206 CCCAGTAGCAAATGTACATGGATA 58.380 41.667 9.63 5.43 0.00 2.59
449 456 4.464008 CCCAGTAGCAAATGTACATGGAT 58.536 43.478 9.63 6.45 0.00 3.41
450 457 3.884895 CCCAGTAGCAAATGTACATGGA 58.115 45.455 9.63 0.00 0.00 3.41
451 458 2.358898 GCCCAGTAGCAAATGTACATGG 59.641 50.000 9.63 4.98 0.00 3.66
452 459 2.032054 CGCCCAGTAGCAAATGTACATG 59.968 50.000 9.63 0.00 0.00 3.21
453 460 2.288666 CGCCCAGTAGCAAATGTACAT 58.711 47.619 1.41 1.41 0.00 2.29
454 461 1.732941 CGCCCAGTAGCAAATGTACA 58.267 50.000 0.00 0.00 0.00 2.90
468 475 2.124736 GCTCTAACCATGCGCCCA 60.125 61.111 4.18 0.00 0.00 5.36
469 476 1.510480 GATGCTCTAACCATGCGCCC 61.510 60.000 4.18 0.00 0.00 6.13
470 477 0.533755 AGATGCTCTAACCATGCGCC 60.534 55.000 4.18 0.00 0.00 6.53
471 478 1.795286 GTAGATGCTCTAACCATGCGC 59.205 52.381 0.00 0.00 29.58 6.09
489 505 1.216977 CAGACAATGACCGGCCGTA 59.783 57.895 26.12 10.65 0.00 4.02
491 507 3.499737 GCAGACAATGACCGGCCG 61.500 66.667 21.04 21.04 0.00 6.13
492 508 3.499737 CGCAGACAATGACCGGCC 61.500 66.667 0.00 0.00 0.00 6.13
493 509 3.499737 CCGCAGACAATGACCGGC 61.500 66.667 0.00 0.00 29.53 6.13
512 528 0.377905 CGCGAACATGATTGGATGCA 59.622 50.000 0.00 0.00 0.00 3.96
515 531 0.819259 CCCCGCGAACATGATTGGAT 60.819 55.000 8.23 0.00 0.00 3.41
517 533 2.480610 CCCCCGCGAACATGATTGG 61.481 63.158 8.23 0.00 0.00 3.16
519 535 0.610785 AAACCCCCGCGAACATGATT 60.611 50.000 8.23 0.00 0.00 2.57
520 536 1.001393 AAACCCCCGCGAACATGAT 60.001 52.632 8.23 0.00 0.00 2.45
524 540 2.281208 CTCAAACCCCCGCGAACA 60.281 61.111 8.23 0.00 0.00 3.18
527 543 3.702048 CTCCTCAAACCCCCGCGA 61.702 66.667 8.23 0.00 0.00 5.87
528 544 3.952628 GACTCCTCAAACCCCCGCG 62.953 68.421 0.00 0.00 0.00 6.46
531 547 1.290134 ATCAGACTCCTCAAACCCCC 58.710 55.000 0.00 0.00 0.00 5.40
534 550 5.532779 ACTTGAAAATCAGACTCCTCAAACC 59.467 40.000 0.00 0.00 0.00 3.27
543 559 5.308825 ACAATCGGACTTGAAAATCAGACT 58.691 37.500 7.02 0.00 0.00 3.24
547 563 6.806249 GCATTTACAATCGGACTTGAAAATCA 59.194 34.615 7.02 0.00 0.00 2.57
553 569 4.832248 AGAGCATTTACAATCGGACTTGA 58.168 39.130 7.02 0.00 0.00 3.02
565 582 8.051901 AGTTGGGTGTAAATAAGAGCATTTAC 57.948 34.615 10.40 10.40 45.45 2.01
568 585 7.668052 TGTTAGTTGGGTGTAAATAAGAGCATT 59.332 33.333 0.00 0.00 0.00 3.56
586 603 5.689819 AGCGCATAGAAACTTTGTTAGTTG 58.310 37.500 11.47 0.00 46.34 3.16
603 620 2.352814 CCTTTATACGAGCCTAGCGCAT 60.353 50.000 11.47 0.00 41.38 4.73
615 632 2.884894 ACTTCTCCGGCCTTTATACG 57.115 50.000 0.00 0.00 0.00 3.06
638 655 4.120792 TCACTTTGCTTCACATTTGCAA 57.879 36.364 0.00 0.00 43.69 4.08
666 683 9.918630 ATGAGTTTGGAGTATTTTTGAAATCTG 57.081 29.630 0.00 0.00 0.00 2.90
673 690 6.024049 GCGAGATGAGTTTGGAGTATTTTTG 58.976 40.000 0.00 0.00 0.00 2.44
690 707 1.718178 GTATCTGACGCATGCGAGATG 59.282 52.381 43.72 27.89 42.83 2.90
733 750 4.745125 GTGATGATGATGTATCCGTCGTTT 59.255 41.667 0.00 0.00 34.77 3.60
774 794 6.779117 AGTGTTTGATCATTTTCTATGCTCG 58.221 36.000 0.00 0.00 0.00 5.03
780 800 8.690203 TTCTTGGAGTGTTTGATCATTTTCTA 57.310 30.769 0.00 0.00 0.00 2.10
809 829 7.330208 CGGTTGTATTACTGCTACTACTTTGTT 59.670 37.037 0.00 0.00 0.00 2.83
815 835 4.966366 CGTCGGTTGTATTACTGCTACTAC 59.034 45.833 0.00 0.00 0.00 2.73
820 840 1.820519 TCCGTCGGTTGTATTACTGCT 59.179 47.619 11.88 0.00 0.00 4.24
822 842 4.384846 GCATATCCGTCGGTTGTATTACTG 59.615 45.833 11.88 0.74 0.00 2.74
837 857 6.810833 CTCGGAGAAAAATGGAGCATATCCG 61.811 48.000 0.00 3.51 45.04 4.18
946 967 4.400961 GAAGGGCGCTGGCTGACT 62.401 66.667 7.64 0.00 39.81 3.41
1283 1689 4.405671 TCGTCGTCCTCCTCGCCT 62.406 66.667 0.00 0.00 0.00 5.52
1285 1691 4.517703 CGTCGTCGTCCTCCTCGC 62.518 72.222 0.00 0.00 0.00 5.03
1286 1692 3.862402 CCGTCGTCGTCCTCCTCG 61.862 72.222 0.71 0.00 35.01 4.63
1562 1988 0.037232 GCTAACACCGCTCTTGGTCT 60.037 55.000 0.00 0.00 41.38 3.85
1620 2048 3.833070 AGGAACTAGGTAAGTGGTGAGTG 59.167 47.826 0.00 0.00 38.88 3.51
1658 2095 6.458888 GCTGAAACCCTACATAAATCTGAAGC 60.459 42.308 0.00 0.00 0.00 3.86
1739 2177 7.015877 CACCGAAAAGAGCTCATTTAAGTTAC 58.984 38.462 16.36 3.17 0.00 2.50
1784 2225 9.208022 TCTGTTTCTATTGTTTCATCACTACAG 57.792 33.333 0.00 0.00 0.00 2.74
1861 2302 3.953612 ACATGTTTCATGGTGTTCAGTGT 59.046 39.130 13.15 0.00 0.00 3.55
1874 2315 5.221204 TGCTTGCAGATTACAACATGTTTCA 60.221 36.000 8.77 0.00 0.00 2.69
1902 2354 6.409524 ACATTAGCATAAAATGTCATGGGG 57.590 37.500 0.00 0.00 42.45 4.96
1911 2363 5.937975 ACAGGCCAACATTAGCATAAAAT 57.062 34.783 5.01 0.00 0.00 1.82
2106 2562 0.525761 CCCCATTTGTGCCAACGTAG 59.474 55.000 0.00 0.00 0.00 3.51
2202 2658 6.432783 TCCTTACAAACCCAACATATTGTCAG 59.567 38.462 0.00 0.00 37.25 3.51
2209 2665 6.657541 GTGAAGATCCTTACAAACCCAACATA 59.342 38.462 0.00 0.00 0.00 2.29
2247 2703 8.306038 TGTTTCCATTCAAAGATCCACTTAATG 58.694 33.333 0.00 0.00 37.93 1.90
2276 2732 4.760204 ACCTCATAAAGTTGTGTTGGTAGC 59.240 41.667 6.50 0.00 30.84 3.58
2533 2992 6.127619 GGGTCTGATCCCTGTGAAATTTAAAG 60.128 42.308 0.00 0.00 43.85 1.85
2596 3055 4.053983 TGAGATCTAATCATGCTCGTTGC 58.946 43.478 0.00 0.00 43.25 4.17
2631 3090 1.221523 AGCTGGATCCCATGGAGACTA 59.778 52.381 15.22 0.58 34.05 2.59
2754 3213 5.939296 ACATTGGCCCAAAATTATTGAACAG 59.061 36.000 0.00 0.00 0.00 3.16
2909 3368 9.703892 AGCAAAGAACACTAGCTATAATAGATG 57.296 33.333 0.00 0.00 33.06 2.90
2939 3398 8.436200 CAAGAATAAGTACAAGAGTAGCAACAC 58.564 37.037 0.00 0.00 0.00 3.32
2974 3433 4.511527 TCATCATGAGAAGGAGTTTCTGC 58.488 43.478 0.09 0.00 46.12 4.26
3218 3677 6.140377 AGAAGGGAAAACAATGTTTTAGGGA 58.860 36.000 22.18 0.00 0.00 4.20
3256 3715 3.641437 ACAACACCATCAACCATTTCG 57.359 42.857 0.00 0.00 0.00 3.46
3484 3943 5.794894 AGATTTAAACGGTGATGACAGACT 58.205 37.500 0.00 0.00 0.00 3.24
3536 3995 4.907879 AGAGCAAGTGTTTGAAAGGAAG 57.092 40.909 0.00 0.00 36.36 3.46
3906 4365 4.211164 CGTGAGACAACAGCAACAATTAGA 59.789 41.667 0.00 0.00 0.00 2.10
4082 4544 9.461312 AACAAGAAGATAAATAACAGCACCATA 57.539 29.630 0.00 0.00 0.00 2.74
4330 4806 9.688592 AACAGCTGAAATAAGAGAAATGAAAAG 57.311 29.630 23.35 0.00 0.00 2.27
4408 4884 9.438228 TGATAGTTAACAAAATCATCCGTGTAA 57.562 29.630 8.61 0.00 0.00 2.41
4433 4909 5.241949 AGCGACCTAGTAATAAGACAGGATG 59.758 44.000 0.00 0.00 46.00 3.51
4696 5174 9.885934 CTCCCATAAATAGATATTCGATACTCG 57.114 37.037 0.00 0.00 42.10 4.18
4768 5246 4.754618 ACAACATTCTCGCTGTACAATTCA 59.245 37.500 0.00 0.00 0.00 2.57
4833 5311 5.921962 ATAGAAATTGGAAGGCCAGAAAC 57.078 39.130 5.01 0.00 46.91 2.78
5060 5540 8.749354 ACAGTTACTTCAAAAAGTGGAAGAAAT 58.251 29.630 8.25 0.00 45.37 2.17
5155 5635 4.503910 TCAACATAGCGCAGACAAGTAAT 58.496 39.130 11.47 0.00 0.00 1.89
5338 5821 3.089284 GGTGGTTTTTATACTGCAGGCT 58.911 45.455 19.93 7.11 0.00 4.58
5352 5835 0.110486 ATTCTGCTGACCGGTGGTTT 59.890 50.000 14.63 0.00 35.25 3.27
5358 5841 3.694072 TGGAAAAATATTCTGCTGACCGG 59.306 43.478 0.00 0.00 0.00 5.28
5360 5843 8.552083 AAATTTGGAAAAATATTCTGCTGACC 57.448 30.769 0.00 0.00 0.00 4.02
5372 5855 8.021898 TCTCAGTGGAAGAAATTTGGAAAAAT 57.978 30.769 0.00 0.00 0.00 1.82
5401 5884 2.045536 GCACAGAGCTTGGAGGGG 60.046 66.667 0.00 0.00 41.15 4.79
5407 5890 3.570926 ATTGTCAATGCACAGAGCTTG 57.429 42.857 0.00 0.00 45.94 4.01
5414 5897 8.959548 ACAAGAGAATAATATTGTCAATGCACA 58.040 29.630 11.87 0.00 30.25 4.57
5449 5932 5.508567 TGATGGCTGGAGAAAAATGTCATA 58.491 37.500 0.00 0.00 0.00 2.15
5482 5965 5.648092 ACCAACAACCTGAAGATAATAGCAC 59.352 40.000 0.00 0.00 0.00 4.40
5633 6116 7.769507 TGTTATTACCTTGTTCAGTGTGTACAA 59.230 33.333 0.00 7.59 35.72 2.41
5635 6118 7.718272 TGTTATTACCTTGTTCAGTGTGTAC 57.282 36.000 0.00 0.00 0.00 2.90
5694 6186 4.163458 TCCCTCTGTGTGTTACTTTTCAGT 59.837 41.667 0.00 0.00 36.99 3.41
5695 6187 4.703897 TCCCTCTGTGTGTTACTTTTCAG 58.296 43.478 0.00 0.00 0.00 3.02
5702 6194 5.473504 ACAAAATGATCCCTCTGTGTGTTAC 59.526 40.000 0.00 0.00 0.00 2.50
5710 6202 4.261489 GCTGCATACAAAATGATCCCTCTG 60.261 45.833 0.00 0.00 0.00 3.35
5715 6207 4.201950 ACGAAGCTGCATACAAAATGATCC 60.202 41.667 1.02 0.00 0.00 3.36
5716 6208 4.731961 CACGAAGCTGCATACAAAATGATC 59.268 41.667 1.02 0.00 0.00 2.92
5717 6209 4.395854 TCACGAAGCTGCATACAAAATGAT 59.604 37.500 1.02 0.00 0.00 2.45
5718 6210 3.750652 TCACGAAGCTGCATACAAAATGA 59.249 39.130 1.02 0.00 0.00 2.57
5741 6233 2.079170 TTGTTGTCATGCCCTTGGAA 57.921 45.000 0.00 0.00 0.00 3.53
5804 6296 8.607459 CAAGTCCAATGTAGAAATGTACAGATC 58.393 37.037 0.33 2.01 36.36 2.75
5805 6297 8.321353 TCAAGTCCAATGTAGAAATGTACAGAT 58.679 33.333 0.33 0.00 36.36 2.90
5807 6299 7.905604 TCAAGTCCAATGTAGAAATGTACAG 57.094 36.000 0.33 0.00 36.36 2.74
5809 6301 8.015658 GTGTTCAAGTCCAATGTAGAAATGTAC 58.984 37.037 0.00 0.00 0.00 2.90
5813 6305 7.765695 ATGTGTTCAAGTCCAATGTAGAAAT 57.234 32.000 0.00 0.00 0.00 2.17
5819 6436 4.889409 AGACAATGTGTTCAAGTCCAATGT 59.111 37.500 0.00 0.00 35.05 2.71
5824 6441 7.202016 TCATTAAGACAATGTGTTCAAGTCC 57.798 36.000 0.00 0.00 35.05 3.85
5929 6546 4.489737 TGGAGGACAGGAGACTTCTTTAA 58.510 43.478 0.00 0.00 40.21 1.52
5984 6601 9.684448 TGTCATGCGAAAATACAAAGAAAATAA 57.316 25.926 0.00 0.00 0.00 1.40
5985 6602 9.853555 ATGTCATGCGAAAATACAAAGAAAATA 57.146 25.926 0.00 0.00 0.00 1.40
5993 6610 7.366513 TCAAAGAATGTCATGCGAAAATACAA 58.633 30.769 0.00 0.00 0.00 2.41
5999 6616 6.070897 TCTTTCAAAGAATGTCATGCGAAA 57.929 33.333 0.00 0.00 33.83 3.46
6002 6619 5.916883 AGTTTCTTTCAAAGAATGTCATGCG 59.083 36.000 13.43 0.00 46.15 4.73
6003 6620 8.801715 TTAGTTTCTTTCAAAGAATGTCATGC 57.198 30.769 13.43 0.00 46.15 4.06
6033 6650 3.648339 TCTGATTGCAGGCAAAGAAAC 57.352 42.857 11.10 2.04 42.53 2.78
6163 6780 2.676748 AGGTGAATTTGCAAAGGGTCA 58.323 42.857 18.19 16.50 0.00 4.02
6231 6848 1.084018 ATGGGAGGGAGCAAAGGAAA 58.916 50.000 0.00 0.00 0.00 3.13
6289 6909 3.005367 CCAAAAGTAACAGCCGACCAAAT 59.995 43.478 0.00 0.00 0.00 2.32
6290 6910 2.359531 CCAAAAGTAACAGCCGACCAAA 59.640 45.455 0.00 0.00 0.00 3.28
6294 6914 0.948678 TGCCAAAAGTAACAGCCGAC 59.051 50.000 0.00 0.00 0.00 4.79
6522 7142 2.746277 CCGTCGGGGCCTCTTTTG 60.746 66.667 0.00 0.00 0.00 2.44
6531 7151 2.124736 ATGTCATTGCCGTCGGGG 60.125 61.111 14.38 0.00 39.58 5.73
6567 7187 3.004734 GCCGGAATTCAATCCTAATGTGG 59.995 47.826 5.05 0.00 37.34 4.17
6588 7208 3.120786 GGTGTGAAGTACATACGTTGTGC 60.121 47.826 11.90 10.74 42.24 4.57
6642 7268 2.480073 CCAAACACACAAGCACAAGGAG 60.480 50.000 0.00 0.00 0.00 3.69
6655 7281 2.557056 TCAACGGAACAAACCAAACACA 59.443 40.909 0.00 0.00 0.00 3.72
6689 7315 1.202177 CCAAATCTGCGGGTCAAATCG 60.202 52.381 0.00 0.00 0.00 3.34
6771 7397 1.160137 ACTGCCGCAACATCTTCTTC 58.840 50.000 0.00 0.00 0.00 2.87
6772 7398 1.609208 AACTGCCGCAACATCTTCTT 58.391 45.000 0.00 0.00 0.00 2.52
6773 7399 1.609208 AAACTGCCGCAACATCTTCT 58.391 45.000 0.00 0.00 0.00 2.85
6812 7438 4.511246 ATGGGGTGCGATGCCTGG 62.511 66.667 0.00 0.00 0.00 4.45
6828 7454 2.999185 TCTCCCAAAGCCCAGAAAAT 57.001 45.000 0.00 0.00 0.00 1.82
6872 7498 3.304057 GGGCACTTTTCTTCTCTTTCACG 60.304 47.826 0.00 0.00 0.00 4.35
6960 7586 1.134037 TCCTAGAGCGTCTTCCTCCTC 60.134 57.143 0.00 0.00 0.00 3.71
6962 7588 1.989706 ATCCTAGAGCGTCTTCCTCC 58.010 55.000 0.00 0.00 0.00 4.30
6963 7589 3.381908 TGAAATCCTAGAGCGTCTTCCTC 59.618 47.826 0.00 0.00 0.00 3.71
6964 7590 3.366396 TGAAATCCTAGAGCGTCTTCCT 58.634 45.455 0.00 0.00 0.00 3.36
7019 7646 4.681942 ACTAATTTGATGTATCGAGCGAGC 59.318 41.667 0.00 0.00 0.00 5.03
7024 7651 7.706607 TCAAGGTCACTAATTTGATGTATCGAG 59.293 37.037 0.00 0.00 0.00 4.04
7025 7652 7.552459 TCAAGGTCACTAATTTGATGTATCGA 58.448 34.615 0.00 0.00 0.00 3.59
7026 7653 7.706607 TCTCAAGGTCACTAATTTGATGTATCG 59.293 37.037 0.00 0.00 0.00 2.92
7027 7654 8.948631 TCTCAAGGTCACTAATTTGATGTATC 57.051 34.615 0.00 0.00 0.00 2.24
7069 7699 8.840321 TGCTGTAAAAGATATCTGGATAAAAGC 58.160 33.333 5.86 10.30 0.00 3.51
7075 7705 9.851686 TTAACATGCTGTAAAAGATATCTGGAT 57.148 29.630 5.86 0.00 0.00 3.41
7115 7747 9.036980 ACTGGTGAATCTCTAACAAATAGTACT 57.963 33.333 0.00 0.00 33.08 2.73
7116 7748 9.654663 AACTGGTGAATCTCTAACAAATAGTAC 57.345 33.333 0.00 0.00 33.08 2.73
7122 7754 9.793259 AGAAATAACTGGTGAATCTCTAACAAA 57.207 29.630 0.00 0.00 0.00 2.83
7160 7792 9.624373 AACTAATATCCTGCATGATATCAATCC 57.376 33.333 20.55 1.81 37.03 3.01
7163 7795 7.884354 TGCAACTAATATCCTGCATGATATCAA 59.116 33.333 20.55 13.02 39.77 2.57
7164 7796 7.335171 GTGCAACTAATATCCTGCATGATATCA 59.665 37.037 20.55 8.10 45.77 2.15
7165 7797 7.201679 GGTGCAACTAATATCCTGCATGATATC 60.202 40.741 20.55 10.52 45.77 1.63
7170 7802 3.884693 TGGTGCAACTAATATCCTGCATG 59.115 43.478 2.04 0.00 45.77 4.06
7171 7803 4.169059 TGGTGCAACTAATATCCTGCAT 57.831 40.909 2.04 0.00 45.77 3.96
7172 7804 3.643199 TGGTGCAACTAATATCCTGCA 57.357 42.857 2.04 0.00 42.28 4.41
7181 7813 7.048629 TCTCATCAAAAATTGGTGCAACTAA 57.951 32.000 2.04 0.00 43.10 2.24
7184 7816 8.483307 AATATCTCATCAAAAATTGGTGCAAC 57.517 30.769 0.00 0.00 41.55 4.17
7185 7817 9.806203 CTAATATCTCATCAAAAATTGGTGCAA 57.194 29.630 0.00 0.00 41.55 4.08
7186 7818 8.415553 CCTAATATCTCATCAAAAATTGGTGCA 58.584 33.333 0.00 0.00 41.55 4.57
7188 7820 9.740239 CACCTAATATCTCATCAAAAATTGGTG 57.260 33.333 0.00 0.00 43.15 4.17
7189 7821 9.479549 ACACCTAATATCTCATCAAAAATTGGT 57.520 29.630 0.00 0.00 0.00 3.67
7201 7863 7.315066 TGGCAATCATACACCTAATATCTCA 57.685 36.000 0.00 0.00 0.00 3.27
7202 7864 7.201679 GCATGGCAATCATACACCTAATATCTC 60.202 40.741 0.00 0.00 34.12 2.75
7212 7874 2.300433 TCCTGCATGGCAATCATACAC 58.700 47.619 0.00 0.00 38.41 2.90
7213 7875 2.732844 TCCTGCATGGCAATCATACA 57.267 45.000 0.00 0.00 38.41 2.29
7214 7876 2.352421 GCATCCTGCATGGCAATCATAC 60.352 50.000 0.00 0.00 44.26 2.39
7215 7877 1.890489 GCATCCTGCATGGCAATCATA 59.110 47.619 0.00 0.00 44.26 2.15
7216 7878 0.679505 GCATCCTGCATGGCAATCAT 59.320 50.000 0.00 0.00 44.26 2.45
7217 7879 2.120765 GCATCCTGCATGGCAATCA 58.879 52.632 0.00 0.00 44.26 2.57
7227 7889 1.098050 CCAAACCTACAGCATCCTGC 58.902 55.000 0.00 0.00 45.46 4.85
7228 7890 2.086869 CACCAAACCTACAGCATCCTG 58.913 52.381 0.00 0.00 44.80 3.86
7229 7891 1.705186 ACACCAAACCTACAGCATCCT 59.295 47.619 0.00 0.00 0.00 3.24
7230 7892 2.084546 GACACCAAACCTACAGCATCC 58.915 52.381 0.00 0.00 0.00 3.51
7231 7893 1.732259 CGACACCAAACCTACAGCATC 59.268 52.381 0.00 0.00 0.00 3.91
7232 7894 1.610624 CCGACACCAAACCTACAGCAT 60.611 52.381 0.00 0.00 0.00 3.79
7233 7895 0.250124 CCGACACCAAACCTACAGCA 60.250 55.000 0.00 0.00 0.00 4.41
7234 7896 0.250166 ACCGACACCAAACCTACAGC 60.250 55.000 0.00 0.00 0.00 4.40
7235 7897 2.249844 AACCGACACCAAACCTACAG 57.750 50.000 0.00 0.00 0.00 2.74
7240 7902 0.881600 ACGCTAACCGACACCAAACC 60.882 55.000 0.00 0.00 41.02 3.27
7260 7922 2.070783 GCACATGCACCAAAGGAAATG 58.929 47.619 0.00 0.00 41.59 2.32
7331 7993 1.467920 CAGTTGAATCTTCTGCCCCC 58.532 55.000 0.00 0.00 0.00 5.40
7334 7996 2.087646 GGTCCAGTTGAATCTTCTGCC 58.912 52.381 0.00 0.00 0.00 4.85
7380 8042 0.105593 CATCACCCCACAGATCCTCG 59.894 60.000 0.00 0.00 0.00 4.63
7411 8073 1.275291 TGTGAGTTCTCGGAATGGGAC 59.725 52.381 0.00 0.00 0.00 4.46
7417 8079 2.151202 GGCATTTGTGAGTTCTCGGAA 58.849 47.619 0.00 0.00 0.00 4.30
7473 8151 2.510691 GGCCCGTCACCACGTATG 60.511 66.667 0.00 0.00 45.17 2.39
7510 8188 2.358737 CGAGACACCAACCTGGGC 60.359 66.667 0.00 0.00 43.37 5.36
7537 8215 3.871006 GCAACATCATCGTACTTCCATCA 59.129 43.478 0.00 0.00 0.00 3.07
7538 8216 3.871006 TGCAACATCATCGTACTTCCATC 59.129 43.478 0.00 0.00 0.00 3.51
7550 8228 1.335810 GCGTCATGGATGCAACATCAT 59.664 47.619 9.60 0.00 43.32 2.45
7561 8239 1.271856 TTCCTAACCAGCGTCATGGA 58.728 50.000 9.95 0.00 43.57 3.41
7584 8262 6.588719 TCATTTTCCAACCAATTTCTCGAT 57.411 33.333 0.00 0.00 0.00 3.59
7585 8263 6.208402 TCATCATTTTCCAACCAATTTCTCGA 59.792 34.615 0.00 0.00 0.00 4.04
7586 8264 6.308766 GTCATCATTTTCCAACCAATTTCTCG 59.691 38.462 0.00 0.00 0.00 4.04
7587 8265 6.308766 CGTCATCATTTTCCAACCAATTTCTC 59.691 38.462 0.00 0.00 0.00 2.87
7588 8266 6.015519 TCGTCATCATTTTCCAACCAATTTCT 60.016 34.615 0.00 0.00 0.00 2.52
7589 8267 6.155827 TCGTCATCATTTTCCAACCAATTTC 58.844 36.000 0.00 0.00 0.00 2.17
7590 8268 6.095432 TCGTCATCATTTTCCAACCAATTT 57.905 33.333 0.00 0.00 0.00 1.82
7591 8269 5.720371 TCGTCATCATTTTCCAACCAATT 57.280 34.783 0.00 0.00 0.00 2.32
7592 8270 5.920193 ATCGTCATCATTTTCCAACCAAT 57.080 34.783 0.00 0.00 0.00 3.16
7593 8271 5.468592 CAATCGTCATCATTTTCCAACCAA 58.531 37.500 0.00 0.00 0.00 3.67
7594 8272 4.617995 GCAATCGTCATCATTTTCCAACCA 60.618 41.667 0.00 0.00 0.00 3.67
7595 8273 3.859386 GCAATCGTCATCATTTTCCAACC 59.141 43.478 0.00 0.00 0.00 3.77
7596 8274 3.543494 CGCAATCGTCATCATTTTCCAAC 59.457 43.478 0.00 0.00 0.00 3.77
7597 8275 3.757184 CGCAATCGTCATCATTTTCCAA 58.243 40.909 0.00 0.00 0.00 3.53
7598 8276 3.403613 CGCAATCGTCATCATTTTCCA 57.596 42.857 0.00 0.00 0.00 3.53
7611 8289 4.034394 CCCCATCATGAATATACGCAATCG 59.966 45.833 0.00 0.00 42.43 3.34
7643 8321 4.567159 ACGTGAAGTCAGTTTCAGTTTCTC 59.433 41.667 0.00 0.00 37.72 2.87
7644 8322 4.504858 ACGTGAAGTCAGTTTCAGTTTCT 58.495 39.130 0.00 0.00 37.72 2.52
7645 8323 4.859629 ACGTGAAGTCAGTTTCAGTTTC 57.140 40.909 0.00 0.00 37.72 2.78
7674 8352 0.822164 ACGGATACCCCACGAAGAAG 59.178 55.000 0.00 0.00 34.14 2.85
7680 8358 1.324740 TGGAGAACGGATACCCCACG 61.325 60.000 0.00 0.00 34.14 4.94
7681 8359 1.129058 ATGGAGAACGGATACCCCAC 58.871 55.000 0.00 0.00 34.14 4.61
7683 8361 4.351127 AGTATATGGAGAACGGATACCCC 58.649 47.826 0.00 0.00 0.00 4.95
7684 8362 6.832384 TGATAGTATATGGAGAACGGATACCC 59.168 42.308 0.00 0.00 0.00 3.69
7685 8363 7.876936 TGATAGTATATGGAGAACGGATACC 57.123 40.000 0.00 0.00 0.00 2.73
7686 8364 9.737427 CAATGATAGTATATGGAGAACGGATAC 57.263 37.037 0.00 0.00 0.00 2.24
7687 8365 9.695155 TCAATGATAGTATATGGAGAACGGATA 57.305 33.333 0.00 0.00 0.00 2.59
7688 8366 8.595362 TCAATGATAGTATATGGAGAACGGAT 57.405 34.615 0.00 0.00 0.00 4.18
7689 8367 8.595362 ATCAATGATAGTATATGGAGAACGGA 57.405 34.615 0.00 0.00 0.00 4.69
7690 8368 7.923344 GGATCAATGATAGTATATGGAGAACGG 59.077 40.741 0.00 0.00 0.00 4.44
7691 8369 8.470002 TGGATCAATGATAGTATATGGAGAACG 58.530 37.037 0.00 0.00 0.00 3.95
7692 8370 9.593134 GTGGATCAATGATAGTATATGGAGAAC 57.407 37.037 0.00 0.00 0.00 3.01
7694 8372 8.899887 TGTGGATCAATGATAGTATATGGAGA 57.100 34.615 0.00 0.00 0.00 3.71
7695 8373 8.975295 TCTGTGGATCAATGATAGTATATGGAG 58.025 37.037 0.00 0.00 0.00 3.86
7697 8375 9.543783 CATCTGTGGATCAATGATAGTATATGG 57.456 37.037 0.00 0.00 0.00 2.74
7702 8380 9.904198 TTTTTCATCTGTGGATCAATGATAGTA 57.096 29.630 0.00 0.00 0.00 1.82
7703 8381 8.680903 GTTTTTCATCTGTGGATCAATGATAGT 58.319 33.333 0.00 0.00 0.00 2.12
7704 8382 8.680001 TGTTTTTCATCTGTGGATCAATGATAG 58.320 33.333 0.00 0.00 0.00 2.08
7705 8383 8.578448 TGTTTTTCATCTGTGGATCAATGATA 57.422 30.769 0.00 0.00 0.00 2.15
7714 8413 7.669304 TCATTATTCCTGTTTTTCATCTGTGGA 59.331 33.333 0.00 0.00 0.00 4.02
7719 8418 6.953520 TGGGTCATTATTCCTGTTTTTCATCT 59.046 34.615 0.00 0.00 0.00 2.90
7747 8452 0.384669 GGCCACCGCTACTACTAGTG 59.615 60.000 5.39 0.00 34.44 2.74
7760 8469 1.353394 AAGCAGGTATAGGGGCCACC 61.353 60.000 0.00 0.00 40.67 4.61
7765 8474 1.807814 AGGTGAAGCAGGTATAGGGG 58.192 55.000 0.00 0.00 0.00 4.79
7768 8477 5.674525 TGATGAAAGGTGAAGCAGGTATAG 58.325 41.667 0.00 0.00 0.00 1.31
7772 8481 2.957402 TGATGAAAGGTGAAGCAGGT 57.043 45.000 0.00 0.00 0.00 4.00
7776 8485 2.476854 GCACGATGATGAAAGGTGAAGC 60.477 50.000 0.00 0.00 0.00 3.86
7777 8486 3.005554 AGCACGATGATGAAAGGTGAAG 58.994 45.455 0.00 0.00 0.00 3.02
7800 8509 1.971167 TGTTTGGATGGAGCGGCAC 60.971 57.895 1.45 0.00 0.00 5.01
7805 8514 0.951558 AACGTGTGTTTGGATGGAGC 59.048 50.000 0.00 0.00 33.53 4.70
7834 8544 7.352719 AGTAATTCTTTTGTAGAAGCACGAG 57.647 36.000 0.00 0.00 45.69 4.18
7868 8578 4.037923 GTGACCAACCAATCTGTTGTCAAT 59.962 41.667 3.54 0.00 43.22 2.57
7906 8616 7.718334 TCTTTTCTTCTGGGTTTTCTCTTTT 57.282 32.000 0.00 0.00 0.00 2.27
7908 8618 7.615757 TCTTTCTTTTCTTCTGGGTTTTCTCTT 59.384 33.333 0.00 0.00 0.00 2.85
7910 8620 7.334844 TCTTTCTTTTCTTCTGGGTTTTCTC 57.665 36.000 0.00 0.00 0.00 2.87
7912 8622 7.817478 TGTTTCTTTCTTTTCTTCTGGGTTTTC 59.183 33.333 0.00 0.00 0.00 2.29
7913 8623 7.676004 TGTTTCTTTCTTTTCTTCTGGGTTTT 58.324 30.769 0.00 0.00 0.00 2.43
7914 8624 7.239763 TGTTTCTTTCTTTTCTTCTGGGTTT 57.760 32.000 0.00 0.00 0.00 3.27
7915 8625 6.850752 TGTTTCTTTCTTTTCTTCTGGGTT 57.149 33.333 0.00 0.00 0.00 4.11
7916 8626 6.850752 TTGTTTCTTTCTTTTCTTCTGGGT 57.149 33.333 0.00 0.00 0.00 4.51
7917 8627 7.547227 TCTTTGTTTCTTTCTTTTCTTCTGGG 58.453 34.615 0.00 0.00 0.00 4.45
7918 8628 8.986477 TTCTTTGTTTCTTTCTTTTCTTCTGG 57.014 30.769 0.00 0.00 0.00 3.86
7919 8629 9.080915 CCTTCTTTGTTTCTTTCTTTTCTTCTG 57.919 33.333 0.00 0.00 0.00 3.02
7923 8633 9.025041 TCTTCCTTCTTTGTTTCTTTCTTTTCT 57.975 29.630 0.00 0.00 0.00 2.52
7924 8634 9.809096 ATCTTCCTTCTTTGTTTCTTTCTTTTC 57.191 29.630 0.00 0.00 0.00 2.29
7925 8635 9.809096 GATCTTCCTTCTTTGTTTCTTTCTTTT 57.191 29.630 0.00 0.00 0.00 2.27
7926 8636 8.971073 TGATCTTCCTTCTTTGTTTCTTTCTTT 58.029 29.630 0.00 0.00 0.00 2.52
7927 8637 8.525290 TGATCTTCCTTCTTTGTTTCTTTCTT 57.475 30.769 0.00 0.00 0.00 2.52
7928 8638 7.777440 ACTGATCTTCCTTCTTTGTTTCTTTCT 59.223 33.333 0.00 0.00 0.00 2.52
7929 8639 7.935520 ACTGATCTTCCTTCTTTGTTTCTTTC 58.064 34.615 0.00 0.00 0.00 2.62
7930 8640 7.888250 ACTGATCTTCCTTCTTTGTTTCTTT 57.112 32.000 0.00 0.00 0.00 2.52
7931 8641 8.432805 TCTACTGATCTTCCTTCTTTGTTTCTT 58.567 33.333 0.00 0.00 0.00 2.52
7932 8642 7.967908 TCTACTGATCTTCCTTCTTTGTTTCT 58.032 34.615 0.00 0.00 0.00 2.52
7933 8643 8.499967 GTTCTACTGATCTTCCTTCTTTGTTTC 58.500 37.037 0.00 0.00 0.00 2.78
7934 8644 7.993183 TGTTCTACTGATCTTCCTTCTTTGTTT 59.007 33.333 0.00 0.00 0.00 2.83
7935 8645 7.442666 GTGTTCTACTGATCTTCCTTCTTTGTT 59.557 37.037 0.00 0.00 0.00 2.83
7936 8646 6.931840 GTGTTCTACTGATCTTCCTTCTTTGT 59.068 38.462 0.00 0.00 0.00 2.83
7937 8647 6.931281 TGTGTTCTACTGATCTTCCTTCTTTG 59.069 38.462 0.00 0.00 0.00 2.77
7941 8651 5.346281 CGTTGTGTTCTACTGATCTTCCTTC 59.654 44.000 0.00 0.00 0.00 3.46
7942 8652 5.230942 CGTTGTGTTCTACTGATCTTCCTT 58.769 41.667 0.00 0.00 0.00 3.36
7944 8654 3.927142 CCGTTGTGTTCTACTGATCTTCC 59.073 47.826 0.00 0.00 0.00 3.46
7958 8670 0.250727 AGTAGCCATTGCCGTTGTGT 60.251 50.000 0.00 0.00 38.69 3.72
7965 8677 4.156739 GCCTGATTATTAGTAGCCATTGCC 59.843 45.833 0.00 0.00 38.69 4.52
7966 8678 5.006386 AGCCTGATTATTAGTAGCCATTGC 58.994 41.667 0.00 0.00 37.95 3.56
7968 8680 6.825721 GCATAGCCTGATTATTAGTAGCCATT 59.174 38.462 0.00 0.00 0.00 3.16
7970 8682 5.485353 AGCATAGCCTGATTATTAGTAGCCA 59.515 40.000 0.00 0.00 0.00 4.75
7971 8683 5.983540 AGCATAGCCTGATTATTAGTAGCC 58.016 41.667 0.00 0.00 0.00 3.93
7972 8684 7.548097 TGTAGCATAGCCTGATTATTAGTAGC 58.452 38.462 0.00 0.00 0.00 3.58
7973 8685 9.360093 GTTGTAGCATAGCCTGATTATTAGTAG 57.640 37.037 0.00 0.00 0.00 2.57
7974 8686 8.027189 CGTTGTAGCATAGCCTGATTATTAGTA 58.973 37.037 0.00 0.00 0.00 1.82
7975 8687 6.868864 CGTTGTAGCATAGCCTGATTATTAGT 59.131 38.462 0.00 0.00 0.00 2.24
7979 8691 5.230942 GTCGTTGTAGCATAGCCTGATTAT 58.769 41.667 0.00 0.00 0.00 1.28
7980 8692 4.617959 GTCGTTGTAGCATAGCCTGATTA 58.382 43.478 0.00 0.00 0.00 1.75
7981 8693 3.458189 GTCGTTGTAGCATAGCCTGATT 58.542 45.455 0.00 0.00 0.00 2.57
7982 8694 2.543861 CGTCGTTGTAGCATAGCCTGAT 60.544 50.000 0.00 0.00 0.00 2.90
7983 8695 1.202256 CGTCGTTGTAGCATAGCCTGA 60.202 52.381 0.00 0.00 0.00 3.86
7984 8696 1.200483 CGTCGTTGTAGCATAGCCTG 58.800 55.000 0.00 0.00 0.00 4.85
7985 8697 1.100510 TCGTCGTTGTAGCATAGCCT 58.899 50.000 0.00 0.00 0.00 4.58
7986 8698 1.197910 GTCGTCGTTGTAGCATAGCC 58.802 55.000 0.00 0.00 0.00 3.93
7987 8699 0.838229 CGTCGTCGTTGTAGCATAGC 59.162 55.000 0.00 0.00 0.00 2.97
7988 8700 2.099621 GTCGTCGTCGTTGTAGCATAG 58.900 52.381 1.33 0.00 38.33 2.23
7989 8701 1.527591 CGTCGTCGTCGTTGTAGCATA 60.528 52.381 3.67 0.00 38.33 3.14
7990 8702 0.791983 CGTCGTCGTCGTTGTAGCAT 60.792 55.000 3.67 0.00 38.33 3.79
7991 8703 1.439201 CGTCGTCGTCGTTGTAGCA 60.439 57.895 3.67 0.00 38.33 3.49
7992 8704 1.154599 TCGTCGTCGTCGTTGTAGC 60.155 57.895 11.41 0.00 38.33 3.58
7993 8705 1.111168 CGTCGTCGTCGTCGTTGTAG 61.111 60.000 12.51 0.00 41.73 2.74
7994 8706 1.154854 CGTCGTCGTCGTCGTTGTA 60.155 57.895 12.51 0.00 41.73 2.41
7995 8707 2.424157 CGTCGTCGTCGTCGTTGT 60.424 61.111 12.51 0.00 41.73 3.32
7996 8708 2.128017 TCGTCGTCGTCGTCGTTG 60.128 61.111 18.44 5.92 45.27 4.10
7997 8709 2.127980 GTCGTCGTCGTCGTCGTT 60.128 61.111 18.44 0.00 45.27 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.