Multiple sequence alignment - TraesCS2D01G082600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G082600 chr2D 100.000 2723 0 0 1 2723 35676851 35679573 0.000000e+00 5029
1 TraesCS2D01G082600 chr2D 85.634 710 63 22 997 1694 35639073 35639755 0.000000e+00 710
2 TraesCS2D01G082600 chr2D 84.595 753 59 31 995 1731 35564372 35565083 0.000000e+00 695
3 TraesCS2D01G082600 chr2D 83.681 766 77 23 996 1725 35531830 35532583 0.000000e+00 678
4 TraesCS2D01G082600 chr2D 82.783 424 56 11 1316 1728 42075333 42074916 1.990000e-96 363
5 TraesCS2D01G082600 chr2D 83.158 285 18 10 888 1168 605102666 605102408 1.630000e-57 233
6 TraesCS2D01G082600 chr2D 86.538 208 13 7 675 873 35638785 35638986 5.910000e-52 215
7 TraesCS2D01G082600 chr2D 79.565 230 26 13 672 884 35564080 35564305 7.860000e-31 145
8 TraesCS2D01G082600 chr2B 87.538 1300 80 40 996 2250 58826202 58827464 0.000000e+00 1428
9 TraesCS2D01G082600 chr2B 86.395 588 53 16 997 1568 58791520 58792096 3.850000e-173 617
10 TraesCS2D01G082600 chr2B 81.746 756 90 28 996 1725 58689430 58690163 3.020000e-164 588
11 TraesCS2D01G082600 chr2B 93.080 289 15 2 2290 2573 58827471 58827759 4.190000e-113 418
12 TraesCS2D01G082600 chr2B 84.576 389 36 13 1000 1374 58773405 58773783 5.540000e-97 364
13 TraesCS2D01G082600 chr2B 86.217 341 41 4 1388 1725 58773830 58774167 5.540000e-97 364
14 TraesCS2D01G082600 chr2B 85.876 354 25 14 1505 1847 58834989 58835328 1.200000e-93 353
15 TraesCS2D01G082600 chr2B 91.089 202 18 0 6 207 58809089 58809290 9.610000e-70 274
16 TraesCS2D01G082600 chr2B 89.623 212 12 6 675 882 58825967 58826172 7.480000e-66 261
17 TraesCS2D01G082600 chr2B 84.146 164 8 7 498 660 58825522 58825668 2.830000e-30 143
18 TraesCS2D01G082600 chr2B 74.541 436 48 26 492 887 58791036 58791448 6.120000e-27 132
19 TraesCS2D01G082600 chr2A 86.811 1016 79 28 996 1977 38908632 38909626 0.000000e+00 1083
20 TraesCS2D01G082600 chr2A 84.501 742 85 20 996 1731 38755036 38755753 0.000000e+00 706
21 TraesCS2D01G082600 chr2A 84.078 716 91 14 996 1708 38812154 38812849 0.000000e+00 669
22 TraesCS2D01G082600 chr2A 88.174 575 43 11 996 1568 38878964 38879515 0.000000e+00 662
23 TraesCS2D01G082600 chr2A 83.683 429 39 14 2176 2573 38909992 38910420 2.560000e-100 375
24 TraesCS2D01G082600 chr2A 93.720 207 13 0 1 207 38878127 38878333 7.320000e-81 311
25 TraesCS2D01G082600 chr2A 88.532 218 15 6 662 873 38878707 38878920 3.480000e-64 255
26 TraesCS2D01G082600 chr2A 92.614 176 12 1 496 670 38878503 38878678 4.500000e-63 252
27 TraesCS2D01G082600 chr2A 82.807 285 19 10 888 1168 736295678 736295420 7.590000e-56 228
28 TraesCS2D01G082600 chr2A 84.472 161 19 3 492 646 38754583 38754743 1.310000e-33 154
29 TraesCS2D01G082600 chr2A 83.030 165 18 6 492 646 38811671 38811835 1.020000e-29 141
30 TraesCS2D01G082600 chr5A 85.207 338 32 9 2375 2699 666922357 666922025 5.620000e-87 331
31 TraesCS2D01G082600 chr1D 96.859 191 6 0 299 489 176952965 176953155 1.220000e-83 320
32 TraesCS2D01G082600 chr5D 96.859 191 5 1 302 492 311354516 311354327 4.380000e-83 318
33 TraesCS2D01G082600 chr5D 96.373 193 6 1 304 496 121102476 121102667 1.570000e-82 316
34 TraesCS2D01G082600 chr5D 96.825 189 6 0 301 489 350380484 350380296 1.570000e-82 316
35 TraesCS2D01G082600 chr5B 96.825 189 6 0 301 489 447830659 447830847 1.570000e-82 316
36 TraesCS2D01G082600 chr5B 81.159 138 23 3 1001 1138 357998787 357998921 1.030000e-19 108
37 TraesCS2D01G082600 chr4D 97.312 186 5 0 304 489 503922209 503922024 1.570000e-82 316
38 TraesCS2D01G082600 chr3D 96.842 190 5 1 304 493 23551506 23551318 1.570000e-82 316
39 TraesCS2D01G082600 chr6D 95.876 194 8 0 296 489 472381286 472381479 5.660000e-82 315
40 TraesCS2D01G082600 chr7D 95.855 193 7 1 300 492 555214010 555213819 7.320000e-81 311


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G082600 chr2D 35676851 35679573 2722 False 5029.0 5029 100.00000 1 2723 1 chr2D.!!$F2 2722
1 TraesCS2D01G082600 chr2D 35531830 35532583 753 False 678.0 678 83.68100 996 1725 1 chr2D.!!$F1 729
2 TraesCS2D01G082600 chr2D 35638785 35639755 970 False 462.5 710 86.08600 675 1694 2 chr2D.!!$F4 1019
3 TraesCS2D01G082600 chr2D 35564080 35565083 1003 False 420.0 695 82.08000 672 1731 2 chr2D.!!$F3 1059
4 TraesCS2D01G082600 chr2B 58689430 58690163 733 False 588.0 588 81.74600 996 1725 1 chr2B.!!$F1 729
5 TraesCS2D01G082600 chr2B 58825522 58827759 2237 False 562.5 1428 88.59675 498 2573 4 chr2B.!!$F6 2075
6 TraesCS2D01G082600 chr2B 58791036 58792096 1060 False 374.5 617 80.46800 492 1568 2 chr2B.!!$F5 1076
7 TraesCS2D01G082600 chr2B 58773405 58774167 762 False 364.0 364 85.39650 1000 1725 2 chr2B.!!$F4 725
8 TraesCS2D01G082600 chr2A 38908632 38910420 1788 False 729.0 1083 85.24700 996 2573 2 chr2A.!!$F4 1577
9 TraesCS2D01G082600 chr2A 38754583 38755753 1170 False 430.0 706 84.48650 492 1731 2 chr2A.!!$F1 1239
10 TraesCS2D01G082600 chr2A 38811671 38812849 1178 False 405.0 669 83.55400 492 1708 2 chr2A.!!$F2 1216
11 TraesCS2D01G082600 chr2A 38878127 38879515 1388 False 370.0 662 90.76000 1 1568 4 chr2A.!!$F3 1567

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 345 0.033504 GAAACTCTGCGACCCACAGA 59.966 55.0 0.0 0.0 41.78 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2204 3003 0.38852 GTGCCCGCCACTTTGAAATC 60.389 55.0 0.0 0.0 41.35 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
220 264 9.990868 AAATAATTAGTGTTGTTAGGGGAATCT 57.009 29.630 0.00 0.00 0.00 2.40
227 271 6.265422 AGTGTTGTTAGGGGAATCTCTTTTTG 59.735 38.462 0.00 0.00 0.00 2.44
230 274 7.780745 TGTTGTTAGGGGAATCTCTTTTTGTTA 59.219 33.333 0.00 0.00 0.00 2.41
231 275 8.635328 GTTGTTAGGGGAATCTCTTTTTGTTAA 58.365 33.333 0.00 0.00 0.00 2.01
289 335 9.463443 AAAAAGTACATGTTTATGAAACTCTGC 57.537 29.630 2.30 0.00 41.90 4.26
290 336 6.408858 AGTACATGTTTATGAAACTCTGCG 57.591 37.500 2.30 0.00 41.90 5.18
292 338 5.283060 ACATGTTTATGAAACTCTGCGAC 57.717 39.130 0.00 0.00 41.90 5.19
293 339 4.154195 ACATGTTTATGAAACTCTGCGACC 59.846 41.667 0.00 0.00 41.90 4.79
294 340 3.071479 TGTTTATGAAACTCTGCGACCC 58.929 45.455 3.92 0.00 41.90 4.46
296 342 2.380084 TATGAAACTCTGCGACCCAC 57.620 50.000 0.00 0.00 0.00 4.61
297 343 0.396435 ATGAAACTCTGCGACCCACA 59.604 50.000 0.00 0.00 0.00 4.17
298 344 0.249868 TGAAACTCTGCGACCCACAG 60.250 55.000 0.00 0.00 36.44 3.66
299 345 0.033504 GAAACTCTGCGACCCACAGA 59.966 55.000 0.00 0.00 41.78 3.41
302 348 4.442038 TCTGCGACCCACAGAGAT 57.558 55.556 0.00 0.00 39.21 2.75
303 349 2.671145 TCTGCGACCCACAGAGATT 58.329 52.632 0.00 0.00 39.21 2.40
304 350 1.847328 TCTGCGACCCACAGAGATTA 58.153 50.000 0.00 0.00 39.21 1.75
305 351 2.176045 TCTGCGACCCACAGAGATTAA 58.824 47.619 0.00 0.00 39.21 1.40
306 352 2.166459 TCTGCGACCCACAGAGATTAAG 59.834 50.000 0.00 0.00 39.21 1.85
307 353 2.166459 CTGCGACCCACAGAGATTAAGA 59.834 50.000 0.00 0.00 37.32 2.10
308 354 2.166459 TGCGACCCACAGAGATTAAGAG 59.834 50.000 0.00 0.00 0.00 2.85
309 355 2.482142 GCGACCCACAGAGATTAAGAGG 60.482 54.545 0.00 0.00 0.00 3.69
310 356 2.101582 CGACCCACAGAGATTAAGAGGG 59.898 54.545 0.00 0.00 38.86 4.30
311 357 3.108376 GACCCACAGAGATTAAGAGGGT 58.892 50.000 0.00 0.00 46.94 4.34
312 358 2.840651 ACCCACAGAGATTAAGAGGGTG 59.159 50.000 0.00 0.00 43.44 4.61
313 359 2.840651 CCCACAGAGATTAAGAGGGTGT 59.159 50.000 0.00 0.00 0.00 4.16
314 360 3.264450 CCCACAGAGATTAAGAGGGTGTT 59.736 47.826 0.00 0.00 0.00 3.32
315 361 4.263506 CCCACAGAGATTAAGAGGGTGTTT 60.264 45.833 0.00 0.00 0.00 2.83
316 362 4.697352 CCACAGAGATTAAGAGGGTGTTTG 59.303 45.833 0.00 0.00 0.00 2.93
317 363 4.697352 CACAGAGATTAAGAGGGTGTTTGG 59.303 45.833 0.00 0.00 0.00 3.28
318 364 4.351111 ACAGAGATTAAGAGGGTGTTTGGT 59.649 41.667 0.00 0.00 0.00 3.67
321 367 5.073144 AGAGATTAAGAGGGTGTTTGGTTCA 59.927 40.000 0.00 0.00 0.00 3.18
322 368 5.316987 AGATTAAGAGGGTGTTTGGTTCAG 58.683 41.667 0.00 0.00 0.00 3.02
324 370 0.478507 AGAGGGTGTTTGGTTCAGGG 59.521 55.000 0.00 0.00 0.00 4.45
327 373 0.185175 GGGTGTTTGGTTCAGGGACT 59.815 55.000 0.00 0.00 43.88 3.85
330 376 2.764010 GGTGTTTGGTTCAGGGACTTTT 59.236 45.455 0.00 0.00 34.60 2.27
332 378 4.403113 GGTGTTTGGTTCAGGGACTTTTTA 59.597 41.667 0.00 0.00 34.60 1.52
333 379 5.451381 GGTGTTTGGTTCAGGGACTTTTTAG 60.451 44.000 0.00 0.00 34.60 1.85
372 418 6.730001 AAAATCCCTAAAAAGTCCCTAGGA 57.270 37.500 11.48 0.00 35.17 2.94
373 419 6.730001 AAATCCCTAAAAAGTCCCTAGGAA 57.270 37.500 11.48 0.00 35.17 3.36
374 420 5.712084 ATCCCTAAAAAGTCCCTAGGAAC 57.288 43.478 11.48 0.00 35.17 3.62
375 421 3.848377 TCCCTAAAAAGTCCCTAGGAACC 59.152 47.826 11.48 0.00 35.17 3.62
376 422 3.590182 CCCTAAAAAGTCCCTAGGAACCA 59.410 47.826 11.48 0.00 35.17 3.67
377 423 4.043686 CCCTAAAAAGTCCCTAGGAACCAA 59.956 45.833 11.48 0.00 35.17 3.67
378 424 5.458508 CCCTAAAAAGTCCCTAGGAACCAAA 60.459 44.000 11.48 0.00 35.17 3.28
379 425 5.475909 CCTAAAAAGTCCCTAGGAACCAAAC 59.524 44.000 11.48 0.00 35.17 2.93
380 426 2.853235 AAGTCCCTAGGAACCAAACG 57.147 50.000 11.48 0.00 31.38 3.60
381 427 0.981943 AGTCCCTAGGAACCAAACGG 59.018 55.000 11.48 0.00 31.38 4.44
382 428 0.035725 GTCCCTAGGAACCAAACGGG 60.036 60.000 11.48 0.00 44.81 5.28
383 429 0.178897 TCCCTAGGAACCAAACGGGA 60.179 55.000 11.48 0.00 41.15 5.14
384 430 0.252197 CCCTAGGAACCAAACGGGAG 59.748 60.000 11.48 0.00 41.15 4.30
385 431 0.252197 CCTAGGAACCAAACGGGAGG 59.748 60.000 1.05 0.00 41.15 4.30
386 432 0.252197 CTAGGAACCAAACGGGAGGG 59.748 60.000 0.00 0.00 41.15 4.30
387 433 0.178897 TAGGAACCAAACGGGAGGGA 60.179 55.000 0.00 0.00 41.15 4.20
388 434 1.303074 GGAACCAAACGGGAGGGAC 60.303 63.158 0.00 0.00 41.15 4.46
390 436 0.109913 GAACCAAACGGGAGGGACTT 59.890 55.000 0.00 0.00 41.55 3.01
391 437 0.554305 AACCAAACGGGAGGGACTTT 59.446 50.000 0.00 0.00 41.55 2.66
392 438 0.554305 ACCAAACGGGAGGGACTTTT 59.446 50.000 0.00 0.00 41.55 2.27
393 439 1.063492 ACCAAACGGGAGGGACTTTTT 60.063 47.619 0.00 0.00 41.55 1.94
394 440 1.611977 CCAAACGGGAGGGACTTTTTC 59.388 52.381 0.00 0.00 41.55 2.29
395 441 2.583143 CAAACGGGAGGGACTTTTTCT 58.417 47.619 0.00 0.00 41.55 2.52
396 442 3.497227 CCAAACGGGAGGGACTTTTTCTA 60.497 47.826 0.00 0.00 41.55 2.10
397 443 3.413846 AACGGGAGGGACTTTTTCTAC 57.586 47.619 0.00 0.00 41.55 2.59
398 444 2.332117 ACGGGAGGGACTTTTTCTACA 58.668 47.619 0.00 0.00 41.55 2.74
399 445 2.302157 ACGGGAGGGACTTTTTCTACAG 59.698 50.000 0.00 0.00 41.55 2.74
400 446 2.354805 CGGGAGGGACTTTTTCTACAGG 60.355 54.545 0.00 0.00 41.55 4.00
401 447 2.026169 GGGAGGGACTTTTTCTACAGGG 60.026 54.545 0.00 0.00 41.55 4.45
402 448 2.910977 GGAGGGACTTTTTCTACAGGGA 59.089 50.000 0.00 0.00 41.55 4.20
403 449 3.307550 GGAGGGACTTTTTCTACAGGGAC 60.308 52.174 0.00 0.00 41.55 4.46
404 450 3.583526 GAGGGACTTTTTCTACAGGGACT 59.416 47.826 0.00 0.00 41.55 3.85
405 451 4.759953 AGGGACTTTTTCTACAGGGACTA 58.240 43.478 0.00 0.00 28.08 2.59
406 452 4.778427 AGGGACTTTTTCTACAGGGACTAG 59.222 45.833 0.00 0.00 28.08 2.57
407 453 4.776308 GGGACTTTTTCTACAGGGACTAGA 59.224 45.833 0.00 0.00 36.02 2.43
408 454 5.247792 GGGACTTTTTCTACAGGGACTAGAA 59.752 44.000 0.00 0.00 36.02 2.10
409 455 6.239800 GGGACTTTTTCTACAGGGACTAGAAA 60.240 42.308 0.00 0.00 38.08 2.52
410 456 7.222161 GGACTTTTTCTACAGGGACTAGAAAA 58.778 38.462 0.00 8.58 43.60 2.29
414 460 8.672823 TTTTTCTACAGGGACTAGAAAAAGAC 57.327 34.615 16.61 0.00 46.05 3.01
415 461 7.613551 TTTCTACAGGGACTAGAAAAAGACT 57.386 36.000 0.00 0.00 37.31 3.24
416 462 6.837471 TCTACAGGGACTAGAAAAAGACTC 57.163 41.667 0.00 0.00 36.02 3.36
417 463 6.553857 TCTACAGGGACTAGAAAAAGACTCT 58.446 40.000 0.00 0.00 36.02 3.24
418 464 7.696981 TCTACAGGGACTAGAAAAAGACTCTA 58.303 38.462 0.00 0.00 36.02 2.43
419 465 6.593268 ACAGGGACTAGAAAAAGACTCTAC 57.407 41.667 0.00 0.00 36.02 2.59
420 466 6.316513 ACAGGGACTAGAAAAAGACTCTACT 58.683 40.000 0.00 0.00 36.02 2.57
421 467 7.468496 ACAGGGACTAGAAAAAGACTCTACTA 58.532 38.462 0.00 0.00 36.02 1.82
422 468 7.949006 ACAGGGACTAGAAAAAGACTCTACTAA 59.051 37.037 0.00 0.00 36.02 2.24
423 469 8.804204 CAGGGACTAGAAAAAGACTCTACTAAA 58.196 37.037 0.00 0.00 36.02 1.85
424 470 9.027202 AGGGACTAGAAAAAGACTCTACTAAAG 57.973 37.037 0.00 0.00 36.02 1.85
425 471 9.022884 GGGACTAGAAAAAGACTCTACTAAAGA 57.977 37.037 0.00 0.00 0.00 2.52
474 520 9.930693 GACTAGAAAAAGTCCTAGAAATTCTGA 57.069 33.333 5.64 0.00 40.06 3.27
477 523 8.397575 AGAAAAAGTCCTAGAAATTCTGAACC 57.602 34.615 5.64 0.00 0.00 3.62
478 524 7.998964 AGAAAAAGTCCTAGAAATTCTGAACCA 59.001 33.333 5.64 0.00 0.00 3.67
479 525 8.533569 AAAAAGTCCTAGAAATTCTGAACCAA 57.466 30.769 5.64 0.00 0.00 3.67
480 526 8.533569 AAAAGTCCTAGAAATTCTGAACCAAA 57.466 30.769 5.64 0.00 0.00 3.28
481 527 7.511959 AAGTCCTAGAAATTCTGAACCAAAC 57.488 36.000 5.64 0.00 0.00 2.93
482 528 6.601332 AGTCCTAGAAATTCTGAACCAAACA 58.399 36.000 5.64 0.00 0.00 2.83
483 529 6.486993 AGTCCTAGAAATTCTGAACCAAACAC 59.513 38.462 5.64 0.00 0.00 3.32
484 530 5.768164 TCCTAGAAATTCTGAACCAAACACC 59.232 40.000 5.64 0.00 0.00 4.16
485 531 4.937201 AGAAATTCTGAACCAAACACCC 57.063 40.909 0.00 0.00 0.00 4.61
486 532 3.641436 AGAAATTCTGAACCAAACACCCC 59.359 43.478 0.00 0.00 0.00 4.95
487 533 2.009681 ATTCTGAACCAAACACCCCC 57.990 50.000 0.00 0.00 0.00 5.40
488 534 0.930726 TTCTGAACCAAACACCCCCT 59.069 50.000 0.00 0.00 0.00 4.79
489 535 0.184933 TCTGAACCAAACACCCCCTG 59.815 55.000 0.00 0.00 0.00 4.45
490 536 0.184933 CTGAACCAAACACCCCCTGA 59.815 55.000 0.00 0.00 0.00 3.86
509 555 5.583854 CCCTGAACAGAGACATGTTTATGAG 59.416 44.000 16.99 4.90 43.32 2.90
522 571 2.936498 GTTTATGAGACACATGGACCCG 59.064 50.000 0.00 0.00 39.77 5.28
531 580 2.169769 ACACATGGACCCGGTACTTATG 59.830 50.000 0.00 0.00 0.00 1.90
599 654 1.338200 ACGACTCTTTCATGGTCCAGC 60.338 52.381 0.00 0.00 0.00 4.85
655 714 2.541762 GACATATGGCGCAAGAAGAGAC 59.458 50.000 10.83 0.00 43.02 3.36
661 720 3.674997 TGGCGCAAGAAGAGACTAAATT 58.325 40.909 10.83 0.00 43.02 1.82
666 725 6.455780 GGCGCAAGAAGAGACTAAATTTACTC 60.456 42.308 10.83 7.45 43.02 2.59
670 729 8.652463 GCAAGAAGAGACTAAATTTACTCTGTC 58.348 37.037 15.43 11.35 39.27 3.51
671 730 9.145865 CAAGAAGAGACTAAATTTACTCTGTCC 57.854 37.037 15.43 10.01 39.27 4.02
695 1039 1.466866 GGCCGGCAAATTTTCTACGAC 60.467 52.381 30.85 0.45 0.00 4.34
786 1162 7.533900 CACACGTCCACAAGTAGATTAAAAATG 59.466 37.037 0.00 0.00 0.00 2.32
787 1163 7.021196 CACGTCCACAAGTAGATTAAAAATGG 58.979 38.462 0.00 0.00 0.00 3.16
788 1164 6.027749 CGTCCACAAGTAGATTAAAAATGGC 58.972 40.000 0.00 0.00 0.00 4.40
789 1165 6.348950 CGTCCACAAGTAGATTAAAAATGGCA 60.349 38.462 0.00 0.00 0.00 4.92
818 1199 3.520290 TTACCACCTCGCTAATCACAG 57.480 47.619 0.00 0.00 0.00 3.66
824 1205 2.688958 ACCTCGCTAATCACAGTACTCC 59.311 50.000 0.00 0.00 0.00 3.85
825 1206 2.952978 CCTCGCTAATCACAGTACTCCT 59.047 50.000 0.00 0.00 0.00 3.69
827 1208 3.880490 CTCGCTAATCACAGTACTCCTCT 59.120 47.826 0.00 0.00 0.00 3.69
828 1209 3.878103 TCGCTAATCACAGTACTCCTCTC 59.122 47.826 0.00 0.00 0.00 3.20
830 1211 3.319689 GCTAATCACAGTACTCCTCTCCC 59.680 52.174 0.00 0.00 0.00 4.30
884 1281 2.094700 CGTCCTTCTCGTCAGAATCCAA 60.095 50.000 0.00 0.00 38.02 3.53
886 1283 4.508662 GTCCTTCTCGTCAGAATCCAAAT 58.491 43.478 0.00 0.00 38.02 2.32
888 1285 6.106673 GTCCTTCTCGTCAGAATCCAAATTA 58.893 40.000 0.00 0.00 38.02 1.40
889 1286 6.256757 GTCCTTCTCGTCAGAATCCAAATTAG 59.743 42.308 0.00 0.00 38.02 1.73
890 1287 6.070767 TCCTTCTCGTCAGAATCCAAATTAGT 60.071 38.462 0.00 0.00 38.02 2.24
898 1295 3.617263 AGAATCCAAATTAGTCACGCGAC 59.383 43.478 15.93 0.00 42.95 5.19
901 1298 3.132160 TCCAAATTAGTCACGCGACAAA 58.868 40.909 15.93 0.00 45.23 2.83
903 1300 3.059188 CCAAATTAGTCACGCGACAAACT 60.059 43.478 15.93 12.60 45.23 2.66
904 1301 4.141680 CAAATTAGTCACGCGACAAACTC 58.858 43.478 15.93 0.00 45.23 3.01
906 1303 0.386352 TAGTCACGCGACAAACTCCG 60.386 55.000 15.93 0.00 45.23 4.63
907 1304 2.355363 TCACGCGACAAACTCCGG 60.355 61.111 15.93 0.00 0.00 5.14
908 1305 4.072088 CACGCGACAAACTCCGGC 62.072 66.667 15.93 0.00 0.00 6.13
946 1343 2.202824 CGAGCAACGGGCCGATAA 60.203 61.111 35.78 0.00 46.50 1.75
947 1344 2.237751 CGAGCAACGGGCCGATAAG 61.238 63.158 35.78 19.07 46.50 1.73
948 1345 2.513897 AGCAACGGGCCGATAAGC 60.514 61.111 35.78 27.17 46.50 3.09
949 1346 2.513897 GCAACGGGCCGATAAGCT 60.514 61.111 35.78 5.60 36.11 3.74
950 1347 1.227438 GCAACGGGCCGATAAGCTA 60.227 57.895 35.78 0.00 36.11 3.32
951 1348 1.222115 GCAACGGGCCGATAAGCTAG 61.222 60.000 35.78 8.92 36.11 3.42
952 1349 1.069258 AACGGGCCGATAAGCTAGC 59.931 57.895 35.78 6.62 0.00 3.42
953 1350 1.400530 AACGGGCCGATAAGCTAGCT 61.401 55.000 35.78 12.68 0.00 3.32
982 1379 3.766691 GCCTCCGCGGTACAGGAA 61.767 66.667 30.04 7.90 34.53 3.36
983 1380 3.090219 GCCTCCGCGGTACAGGAAT 62.090 63.158 30.04 0.00 34.53 3.01
984 1381 1.067582 CCTCCGCGGTACAGGAATC 59.932 63.158 27.15 0.00 34.53 2.52
985 1382 1.672854 CCTCCGCGGTACAGGAATCA 61.673 60.000 27.15 0.00 34.53 2.57
986 1383 0.174845 CTCCGCGGTACAGGAATCAA 59.825 55.000 27.15 0.00 34.53 2.57
987 1384 0.108520 TCCGCGGTACAGGAATCAAC 60.109 55.000 27.15 0.00 32.00 3.18
989 1386 1.713830 GCGGTACAGGAATCAACGC 59.286 57.895 0.00 0.00 38.70 4.84
991 1388 1.713830 GGTACAGGAATCAACGCGC 59.286 57.895 5.73 0.00 0.00 6.86
992 1389 1.343821 GTACAGGAATCAACGCGCG 59.656 57.895 30.96 30.96 0.00 6.86
993 1390 1.080366 TACAGGAATCAACGCGCGT 60.080 52.632 32.73 32.73 0.00 6.01
1053 1497 3.717294 GTGATCCAGCACCCGGGT 61.717 66.667 24.16 24.16 32.68 5.28
1239 1692 3.474570 CTCCTCAAGCCCCGGGAG 61.475 72.222 26.32 13.96 39.22 4.30
1299 1752 1.002888 CAAGGTCAGTCAGTGCCTGAT 59.997 52.381 7.21 0.00 42.73 2.90
1324 1815 4.605064 ATCCGCCATTGGATTGGG 57.395 55.556 6.95 1.58 46.74 4.12
1340 1833 1.892209 TGGGTTCCTTTCGCTTCTTC 58.108 50.000 0.00 0.00 0.00 2.87
1354 1847 1.903183 CTTCTTCTCCGGTTCCCTCTT 59.097 52.381 0.00 0.00 0.00 2.85
1372 1905 8.380742 TCCCTCTTTTACTCACAGAGATTAAT 57.619 34.615 0.31 0.00 36.88 1.40
1375 1908 9.311916 CCTCTTTTACTCACAGAGATTAATCAG 57.688 37.037 17.56 9.18 36.88 2.90
1436 1980 1.827789 CGAGGAGGCAGGAGAGGAG 60.828 68.421 0.00 0.00 0.00 3.69
1740 2305 3.350219 TGAACCAGAAATGGTAGGAGC 57.650 47.619 0.00 0.00 42.20 4.70
1748 2313 2.366640 AATGGTAGGAGCGAGCTAGA 57.633 50.000 0.00 0.00 0.00 2.43
1777 2342 0.321919 ATTTTGCGAGAGGAGCAGCA 60.322 50.000 0.00 0.00 46.01 4.41
1855 2428 3.006940 ACGTGCGTGAAAATACATCCAT 58.993 40.909 0.00 0.00 0.00 3.41
1859 2432 2.612212 GCGTGAAAATACATCCATCGGT 59.388 45.455 0.00 0.00 0.00 4.69
1865 2438 3.393089 AATACATCCATCGGTCTCTGC 57.607 47.619 0.00 0.00 0.00 4.26
1960 2542 1.929836 GGCTAGTTGCTGTTGAGATCG 59.070 52.381 0.00 0.00 42.39 3.69
1961 2543 2.417379 GGCTAGTTGCTGTTGAGATCGA 60.417 50.000 0.00 0.00 42.39 3.59
1962 2544 3.254060 GCTAGTTGCTGTTGAGATCGAA 58.746 45.455 0.00 0.00 38.95 3.71
1963 2545 3.868077 GCTAGTTGCTGTTGAGATCGAAT 59.132 43.478 0.00 0.00 38.95 3.34
1964 2546 4.260132 GCTAGTTGCTGTTGAGATCGAATG 60.260 45.833 0.00 0.00 38.95 2.67
1965 2547 3.005554 AGTTGCTGTTGAGATCGAATGG 58.994 45.455 0.00 0.00 0.00 3.16
1966 2548 2.744202 GTTGCTGTTGAGATCGAATGGT 59.256 45.455 0.00 0.00 0.00 3.55
1967 2549 3.057969 TGCTGTTGAGATCGAATGGTT 57.942 42.857 0.00 0.00 0.00 3.67
1968 2550 3.411446 TGCTGTTGAGATCGAATGGTTT 58.589 40.909 0.00 0.00 0.00 3.27
1969 2551 4.574892 TGCTGTTGAGATCGAATGGTTTA 58.425 39.130 0.00 0.00 0.00 2.01
1970 2552 5.185454 TGCTGTTGAGATCGAATGGTTTAT 58.815 37.500 0.00 0.00 0.00 1.40
1971 2553 5.294306 TGCTGTTGAGATCGAATGGTTTATC 59.706 40.000 0.00 0.00 0.00 1.75
1972 2554 5.277538 GCTGTTGAGATCGAATGGTTTATCC 60.278 44.000 0.00 0.00 0.00 2.59
1984 2566 4.137116 TGGTTTATCCAGGTTGAGATCG 57.863 45.455 0.00 0.00 41.93 3.69
1987 2569 5.104527 TGGTTTATCCAGGTTGAGATCGAAT 60.105 40.000 0.00 0.00 41.93 3.34
2006 2588 2.522638 GGTTTATCCAGGTCGCGCG 61.523 63.158 26.76 26.76 35.97 6.86
2035 2620 1.803922 CGCGCTATTCGTGGTCACA 60.804 57.895 5.56 0.00 44.36 3.58
2060 2656 4.564821 GGAGCCTCATTGTGTTACCTTACA 60.565 45.833 0.00 0.00 0.00 2.41
2061 2657 5.179452 AGCCTCATTGTGTTACCTTACAT 57.821 39.130 0.00 0.00 0.00 2.29
2062 2658 5.570320 AGCCTCATTGTGTTACCTTACATT 58.430 37.500 0.00 0.00 0.00 2.71
2064 2660 5.183140 GCCTCATTGTGTTACCTTACATTGT 59.817 40.000 0.00 0.00 32.76 2.71
2066 2662 6.206634 CCTCATTGTGTTACCTTACATTGTGT 59.793 38.462 0.00 0.00 32.76 3.72
2067 2663 7.197071 TCATTGTGTTACCTTACATTGTGTC 57.803 36.000 0.00 0.00 32.76 3.67
2068 2664 6.768381 TCATTGTGTTACCTTACATTGTGTCA 59.232 34.615 0.00 0.00 32.76 3.58
2069 2665 5.994887 TGTGTTACCTTACATTGTGTCAC 57.005 39.130 0.00 0.00 0.00 3.67
2070 2666 5.676552 TGTGTTACCTTACATTGTGTCACT 58.323 37.500 4.27 0.00 0.00 3.41
2072 2668 6.702723 TGTGTTACCTTACATTGTGTCACTAC 59.297 38.462 4.27 0.00 0.00 2.73
2073 2669 6.702723 GTGTTACCTTACATTGTGTCACTACA 59.297 38.462 4.27 0.00 0.00 2.74
2085 2681 8.621532 ATTGTGTCACTACAATGTGTCTTTAT 57.378 30.769 4.27 0.00 46.44 1.40
2095 2701 6.985117 ACAATGTGTCTTTATTGTGCTCATT 58.015 32.000 0.00 0.00 43.66 2.57
2097 2703 5.375417 TGTGTCTTTATTGTGCTCATTGG 57.625 39.130 0.00 0.00 0.00 3.16
2098 2704 4.218200 TGTGTCTTTATTGTGCTCATTGGG 59.782 41.667 0.00 0.00 0.00 4.12
2099 2705 3.763360 TGTCTTTATTGTGCTCATTGGGG 59.237 43.478 0.00 0.00 0.00 4.96
2101 2707 4.646492 GTCTTTATTGTGCTCATTGGGGAT 59.354 41.667 0.00 0.00 0.00 3.85
2102 2708 5.827797 GTCTTTATTGTGCTCATTGGGGATA 59.172 40.000 0.00 0.00 0.00 2.59
2103 2709 6.491403 GTCTTTATTGTGCTCATTGGGGATAT 59.509 38.462 0.00 0.00 0.00 1.63
2108 2718 4.910195 TGTGCTCATTGGGGATATACATC 58.090 43.478 0.00 0.00 0.00 3.06
2169 2779 2.288025 ACTGAACCCCGCGGTACAT 61.288 57.895 26.12 7.08 43.71 2.29
2170 2780 1.520787 CTGAACCCCGCGGTACATC 60.521 63.158 26.12 16.53 43.71 3.06
2171 2781 2.233605 CTGAACCCCGCGGTACATCA 62.234 60.000 26.12 20.04 43.71 3.07
2172 2782 1.812507 GAACCCCGCGGTACATCAC 60.813 63.158 26.12 4.79 43.71 3.06
2173 2783 3.319441 AACCCCGCGGTACATCACC 62.319 63.158 26.12 0.00 43.71 4.02
2204 3003 7.762382 ACTTAAGTTTCAGTTTTCAGTTCAGG 58.238 34.615 1.12 0.00 0.00 3.86
2205 3004 7.610305 ACTTAAGTTTCAGTTTTCAGTTCAGGA 59.390 33.333 1.12 0.00 0.00 3.86
2206 3005 8.519799 TTAAGTTTCAGTTTTCAGTTCAGGAT 57.480 30.769 0.00 0.00 0.00 3.24
2207 3006 7.410120 AAGTTTCAGTTTTCAGTTCAGGATT 57.590 32.000 0.00 0.00 0.00 3.01
2209 3008 7.484140 AGTTTCAGTTTTCAGTTCAGGATTTC 58.516 34.615 0.00 0.00 0.00 2.17
2217 3020 3.569701 TCAGTTCAGGATTTCAAAGTGGC 59.430 43.478 0.00 0.00 0.00 5.01
2218 3021 2.554032 AGTTCAGGATTTCAAAGTGGCG 59.446 45.455 0.00 0.00 0.00 5.69
2227 3034 2.831284 AAAGTGGCGGGCACGTTT 60.831 55.556 25.37 21.76 43.45 3.60
2231 3038 4.243008 TGGCGGGCACGTTTCTCA 62.243 61.111 11.45 0.00 43.45 3.27
2255 3066 1.153369 ATGAATGGTCAGACCGCCG 60.153 57.895 15.24 0.00 42.58 6.46
2266 3077 3.407967 ACCGCCGGGTCAATGGAT 61.408 61.111 8.57 0.00 46.01 3.41
2268 3079 2.480610 CCGCCGGGTCAATGGATTG 61.481 63.158 2.18 0.00 39.10 2.67
2269 3080 1.451207 CGCCGGGTCAATGGATTGA 60.451 57.895 2.18 0.00 43.94 2.57
2288 3116 7.772757 TGGATTGAAAAACTTTAAAAGTGCCAT 59.227 29.630 0.00 0.00 41.91 4.40
2293 3121 5.799827 AAACTTTAAAAGTGCCATGCCTA 57.200 34.783 0.00 0.00 41.91 3.93
2309 3137 2.290641 TGCCTAAGAATTCGCTTTCCCA 60.291 45.455 0.00 0.00 0.00 4.37
2310 3138 2.952310 GCCTAAGAATTCGCTTTCCCAT 59.048 45.455 0.00 0.00 0.00 4.00
2311 3139 3.381590 GCCTAAGAATTCGCTTTCCCATT 59.618 43.478 0.00 0.00 0.00 3.16
2441 3272 4.089239 TGATGGGCACGCCGCTAA 62.089 61.111 1.14 0.00 41.91 3.09
2550 3383 2.177977 CGAGTACGTTGACATGAGCTC 58.822 52.381 6.82 6.82 34.56 4.09
2573 3406 1.678970 GGATGGGCCACCTTGACAC 60.679 63.158 9.28 0.00 37.76 3.67
2574 3407 1.074775 GATGGGCCACCTTGACACA 59.925 57.895 9.28 0.00 37.76 3.72
2575 3408 0.323725 GATGGGCCACCTTGACACAT 60.324 55.000 9.28 0.00 37.76 3.21
2576 3409 0.612732 ATGGGCCACCTTGACACATG 60.613 55.000 9.28 0.00 37.76 3.21
2577 3410 1.978617 GGGCCACCTTGACACATGG 60.979 63.158 4.39 0.00 35.21 3.66
2579 3412 3.266964 CCACCTTGACACATGGCG 58.733 61.111 0.00 0.00 32.73 5.69
2580 3413 2.562912 CACCTTGACACATGGCGC 59.437 61.111 0.00 0.00 32.73 6.53
2581 3414 2.672996 ACCTTGACACATGGCGCC 60.673 61.111 22.73 22.73 32.73 6.53
2582 3415 2.672651 CCTTGACACATGGCGCCA 60.673 61.111 34.80 34.80 0.00 5.69
2583 3416 2.562912 CTTGACACATGGCGCCAC 59.437 61.111 35.50 19.90 0.00 5.01
2584 3417 1.968017 CTTGACACATGGCGCCACT 60.968 57.895 35.50 18.02 0.00 4.00
2585 3418 1.518056 CTTGACACATGGCGCCACTT 61.518 55.000 35.50 19.67 0.00 3.16
2586 3419 1.794151 TTGACACATGGCGCCACTTG 61.794 55.000 35.50 31.58 0.00 3.16
2587 3420 2.981560 GACACATGGCGCCACTTGG 61.982 63.158 35.50 23.38 38.53 3.61
2588 3421 2.985282 CACATGGCGCCACTTGGT 60.985 61.111 35.50 24.08 37.57 3.67
2589 3422 2.672996 ACATGGCGCCACTTGGTC 60.673 61.111 35.50 0.00 37.57 4.02
2590 3423 3.443045 CATGGCGCCACTTGGTCC 61.443 66.667 35.50 0.00 37.57 4.46
2591 3424 3.650950 ATGGCGCCACTTGGTCCT 61.651 61.111 35.50 10.89 37.57 3.85
2592 3425 3.628646 ATGGCGCCACTTGGTCCTC 62.629 63.158 35.50 0.00 37.57 3.71
2593 3426 4.329545 GGCGCCACTTGGTCCTCA 62.330 66.667 24.80 0.00 37.57 3.86
2594 3427 2.281484 GCGCCACTTGGTCCTCAA 60.281 61.111 0.00 0.00 37.57 3.02
2595 3428 1.675641 GCGCCACTTGGTCCTCAAT 60.676 57.895 0.00 0.00 37.57 2.57
2596 3429 1.244019 GCGCCACTTGGTCCTCAATT 61.244 55.000 0.00 0.00 37.57 2.32
2597 3430 1.247567 CGCCACTTGGTCCTCAATTT 58.752 50.000 0.00 0.00 37.57 1.82
2598 3431 1.068333 CGCCACTTGGTCCTCAATTTG 60.068 52.381 0.00 0.00 37.57 2.32
2599 3432 1.273327 GCCACTTGGTCCTCAATTTGG 59.727 52.381 0.00 0.00 39.56 3.28
2600 3433 1.895131 CCACTTGGTCCTCAATTTGGG 59.105 52.381 0.00 0.00 35.96 4.12
2601 3434 1.273327 CACTTGGTCCTCAATTTGGGC 59.727 52.381 0.00 0.00 34.45 5.36
2602 3435 1.133199 ACTTGGTCCTCAATTTGGGCA 60.133 47.619 0.00 0.00 34.45 5.36
2603 3436 1.969923 CTTGGTCCTCAATTTGGGCAA 59.030 47.619 0.00 0.00 34.45 4.52
2604 3437 2.094100 TGGTCCTCAATTTGGGCAAA 57.906 45.000 0.00 0.00 34.46 3.68
2605 3438 2.402564 TGGTCCTCAATTTGGGCAAAA 58.597 42.857 0.00 0.00 33.56 2.44
2606 3439 2.103941 TGGTCCTCAATTTGGGCAAAAC 59.896 45.455 0.00 0.00 33.56 2.43
2607 3440 2.549992 GGTCCTCAATTTGGGCAAAACC 60.550 50.000 0.00 0.00 33.56 3.27
2617 3450 3.884226 GGCAAAACCCAAAACCCAA 57.116 47.368 0.00 0.00 0.00 4.12
2618 3451 1.384525 GGCAAAACCCAAAACCCAAC 58.615 50.000 0.00 0.00 0.00 3.77
2619 3452 1.010580 GCAAAACCCAAAACCCAACG 58.989 50.000 0.00 0.00 0.00 4.10
2620 3453 1.010580 CAAAACCCAAAACCCAACGC 58.989 50.000 0.00 0.00 0.00 4.84
2621 3454 0.906066 AAAACCCAAAACCCAACGCT 59.094 45.000 0.00 0.00 0.00 5.07
2622 3455 0.906066 AAACCCAAAACCCAACGCTT 59.094 45.000 0.00 0.00 0.00 4.68
2623 3456 1.777941 AACCCAAAACCCAACGCTTA 58.222 45.000 0.00 0.00 0.00 3.09
2624 3457 2.003937 ACCCAAAACCCAACGCTTAT 57.996 45.000 0.00 0.00 0.00 1.73
2625 3458 1.616374 ACCCAAAACCCAACGCTTATG 59.384 47.619 0.00 0.00 0.00 1.90
2626 3459 1.067213 CCCAAAACCCAACGCTTATGG 60.067 52.381 0.00 0.00 37.71 2.74
2627 3460 1.671556 CCAAAACCCAACGCTTATGGC 60.672 52.381 0.00 0.00 36.58 4.40
2628 3461 0.606096 AAAACCCAACGCTTATGGCC 59.394 50.000 0.00 0.00 36.58 5.36
2629 3462 1.254975 AAACCCAACGCTTATGGCCC 61.255 55.000 0.00 0.00 36.58 5.80
2630 3463 2.044451 CCCAACGCTTATGGCCCA 60.044 61.111 0.00 0.00 36.58 5.36
2631 3464 2.414785 CCCAACGCTTATGGCCCAC 61.415 63.158 0.00 0.00 36.58 4.61
2632 3465 2.414785 CCAACGCTTATGGCCCACC 61.415 63.158 0.00 0.00 37.74 4.61
2641 3474 3.146182 TGGCCCACCAAATTGTGC 58.854 55.556 0.00 0.00 45.37 4.57
2642 3475 1.459158 TGGCCCACCAAATTGTGCT 60.459 52.632 0.00 0.00 45.37 4.40
2643 3476 1.004679 GGCCCACCAAATTGTGCTG 60.005 57.895 0.00 0.00 34.85 4.41
2644 3477 1.668793 GCCCACCAAATTGTGCTGC 60.669 57.895 0.00 0.00 34.85 5.25
2645 3478 2.051941 CCCACCAAATTGTGCTGCT 58.948 52.632 0.00 0.00 34.85 4.24
2646 3479 1.255882 CCCACCAAATTGTGCTGCTA 58.744 50.000 0.00 0.00 34.85 3.49
2647 3480 1.617850 CCCACCAAATTGTGCTGCTAA 59.382 47.619 0.00 0.00 34.85 3.09
2648 3481 2.610232 CCCACCAAATTGTGCTGCTAAC 60.610 50.000 0.00 0.00 34.85 2.34
2649 3482 2.610232 CCACCAAATTGTGCTGCTAACC 60.610 50.000 0.00 0.00 34.85 2.85
2650 3483 2.035704 CACCAAATTGTGCTGCTAACCA 59.964 45.455 0.00 0.00 0.00 3.67
2651 3484 2.297033 ACCAAATTGTGCTGCTAACCAG 59.703 45.455 0.00 0.00 44.67 4.00
2652 3485 2.297033 CCAAATTGTGCTGCTAACCAGT 59.703 45.455 0.00 0.00 43.71 4.00
2653 3486 3.505680 CCAAATTGTGCTGCTAACCAGTA 59.494 43.478 0.00 0.00 43.71 2.74
2654 3487 4.022416 CCAAATTGTGCTGCTAACCAGTAA 60.022 41.667 0.00 0.00 43.71 2.24
2655 3488 5.508825 CCAAATTGTGCTGCTAACCAGTAAA 60.509 40.000 0.00 0.00 43.71 2.01
2656 3489 5.782893 AATTGTGCTGCTAACCAGTAAAA 57.217 34.783 0.00 0.00 43.71 1.52
2657 3490 4.561735 TTGTGCTGCTAACCAGTAAAAC 57.438 40.909 0.00 0.00 43.71 2.43
2658 3491 3.815809 TGTGCTGCTAACCAGTAAAACT 58.184 40.909 0.00 0.00 43.71 2.66
2659 3492 4.204012 TGTGCTGCTAACCAGTAAAACTT 58.796 39.130 0.00 0.00 43.71 2.66
2660 3493 4.274950 TGTGCTGCTAACCAGTAAAACTTC 59.725 41.667 0.00 0.00 43.71 3.01
2661 3494 4.274950 GTGCTGCTAACCAGTAAAACTTCA 59.725 41.667 0.00 0.00 43.71 3.02
2662 3495 4.515191 TGCTGCTAACCAGTAAAACTTCAG 59.485 41.667 0.00 0.00 43.71 3.02
2663 3496 4.083271 GCTGCTAACCAGTAAAACTTCAGG 60.083 45.833 0.00 0.00 43.71 3.86
2664 3497 3.818773 TGCTAACCAGTAAAACTTCAGGC 59.181 43.478 0.00 0.00 0.00 4.85
2665 3498 3.190744 GCTAACCAGTAAAACTTCAGGCC 59.809 47.826 0.00 0.00 0.00 5.19
2666 3499 3.595190 AACCAGTAAAACTTCAGGCCT 57.405 42.857 0.00 0.00 0.00 5.19
2667 3500 3.141767 ACCAGTAAAACTTCAGGCCTC 57.858 47.619 0.00 0.00 0.00 4.70
2668 3501 2.711547 ACCAGTAAAACTTCAGGCCTCT 59.288 45.455 0.00 0.00 0.00 3.69
2669 3502 3.244596 ACCAGTAAAACTTCAGGCCTCTC 60.245 47.826 0.00 0.00 0.00 3.20
2670 3503 3.008485 CCAGTAAAACTTCAGGCCTCTCT 59.992 47.826 0.00 0.00 0.00 3.10
2671 3504 4.249661 CAGTAAAACTTCAGGCCTCTCTC 58.750 47.826 0.00 0.00 0.00 3.20
2672 3505 4.020662 CAGTAAAACTTCAGGCCTCTCTCT 60.021 45.833 0.00 0.00 0.00 3.10
2673 3506 4.595350 AGTAAAACTTCAGGCCTCTCTCTT 59.405 41.667 0.00 0.00 0.00 2.85
2674 3507 4.445557 AAAACTTCAGGCCTCTCTCTTT 57.554 40.909 0.00 0.00 0.00 2.52
2675 3508 3.694043 AACTTCAGGCCTCTCTCTTTC 57.306 47.619 0.00 0.00 0.00 2.62
2676 3509 2.614259 ACTTCAGGCCTCTCTCTTTCA 58.386 47.619 0.00 0.00 0.00 2.69
2677 3510 2.301583 ACTTCAGGCCTCTCTCTTTCAC 59.698 50.000 0.00 0.00 0.00 3.18
2678 3511 0.891373 TCAGGCCTCTCTCTTTCACG 59.109 55.000 0.00 0.00 0.00 4.35
2679 3512 0.605589 CAGGCCTCTCTCTTTCACGT 59.394 55.000 0.00 0.00 0.00 4.49
2680 3513 0.605589 AGGCCTCTCTCTTTCACGTG 59.394 55.000 9.94 9.94 0.00 4.49
2681 3514 0.603569 GGCCTCTCTCTTTCACGTGA 59.396 55.000 15.76 15.76 0.00 4.35
2682 3515 1.670380 GGCCTCTCTCTTTCACGTGAC 60.670 57.143 19.90 2.06 0.00 3.67
2683 3516 1.000163 GCCTCTCTCTTTCACGTGACA 60.000 52.381 19.90 11.56 0.00 3.58
2684 3517 2.545952 GCCTCTCTCTTTCACGTGACAA 60.546 50.000 19.90 14.33 0.00 3.18
2685 3518 3.717707 CCTCTCTCTTTCACGTGACAAA 58.282 45.455 19.90 10.25 0.00 2.83
2686 3519 4.119862 CCTCTCTCTTTCACGTGACAAAA 58.880 43.478 19.90 9.45 0.00 2.44
2687 3520 4.570772 CCTCTCTCTTTCACGTGACAAAAA 59.429 41.667 19.90 9.06 0.00 1.94
2688 3521 5.277058 CCTCTCTCTTTCACGTGACAAAAAG 60.277 44.000 19.90 18.57 0.00 2.27
2689 3522 4.570772 TCTCTCTTTCACGTGACAAAAAGG 59.429 41.667 19.90 12.48 31.24 3.11
2690 3523 4.509616 TCTCTTTCACGTGACAAAAAGGA 58.490 39.130 19.90 14.36 31.24 3.36
2691 3524 4.938832 TCTCTTTCACGTGACAAAAAGGAA 59.061 37.500 19.90 6.30 31.24 3.36
2692 3525 5.413213 TCTCTTTCACGTGACAAAAAGGAAA 59.587 36.000 19.90 5.53 31.24 3.13
2693 3526 6.015027 TCTTTCACGTGACAAAAAGGAAAA 57.985 33.333 19.90 4.76 31.24 2.29
2694 3527 6.448006 TCTTTCACGTGACAAAAAGGAAAAA 58.552 32.000 19.90 4.21 31.24 1.94
2695 3528 6.363896 TCTTTCACGTGACAAAAAGGAAAAAC 59.636 34.615 19.90 0.00 31.24 2.43
2696 3529 5.122512 TCACGTGACAAAAAGGAAAAACA 57.877 34.783 15.76 0.00 0.00 2.83
2697 3530 5.715070 TCACGTGACAAAAAGGAAAAACAT 58.285 33.333 15.76 0.00 0.00 2.71
2698 3531 6.853720 TCACGTGACAAAAAGGAAAAACATA 58.146 32.000 15.76 0.00 0.00 2.29
2699 3532 6.748198 TCACGTGACAAAAAGGAAAAACATAC 59.252 34.615 15.76 0.00 0.00 2.39
2700 3533 6.750039 CACGTGACAAAAAGGAAAAACATACT 59.250 34.615 10.90 0.00 0.00 2.12
2701 3534 6.970613 ACGTGACAAAAAGGAAAAACATACTC 59.029 34.615 0.00 0.00 0.00 2.59
2702 3535 6.416750 CGTGACAAAAAGGAAAAACATACTCC 59.583 38.462 0.00 0.00 0.00 3.85
2703 3536 6.700081 GTGACAAAAAGGAAAAACATACTCCC 59.300 38.462 0.00 0.00 0.00 4.30
2704 3537 6.381420 TGACAAAAAGGAAAAACATACTCCCA 59.619 34.615 0.00 0.00 0.00 4.37
2705 3538 7.070571 TGACAAAAAGGAAAAACATACTCCCAT 59.929 33.333 0.00 0.00 0.00 4.00
2706 3539 8.485578 ACAAAAAGGAAAAACATACTCCCATA 57.514 30.769 0.00 0.00 0.00 2.74
2707 3540 8.585018 ACAAAAAGGAAAAACATACTCCCATAG 58.415 33.333 0.00 0.00 0.00 2.23
2708 3541 7.718334 AAAAGGAAAAACATACTCCCATAGG 57.282 36.000 0.00 0.00 0.00 2.57
2709 3542 4.793201 AGGAAAAACATACTCCCATAGGC 58.207 43.478 0.00 0.00 0.00 3.93
2710 3543 4.478686 AGGAAAAACATACTCCCATAGGCT 59.521 41.667 0.00 0.00 0.00 4.58
2711 3544 5.044105 AGGAAAAACATACTCCCATAGGCTT 60.044 40.000 0.00 0.00 0.00 4.35
2712 3545 5.656859 GGAAAAACATACTCCCATAGGCTTT 59.343 40.000 0.00 0.00 0.00 3.51
2713 3546 6.154534 GGAAAAACATACTCCCATAGGCTTTT 59.845 38.462 0.00 0.00 0.00 2.27
2714 3547 7.340999 GGAAAAACATACTCCCATAGGCTTTTA 59.659 37.037 0.00 0.00 0.00 1.52
2715 3548 8.838649 AAAAACATACTCCCATAGGCTTTTAT 57.161 30.769 0.00 0.00 0.00 1.40
2716 3549 8.838649 AAAACATACTCCCATAGGCTTTTATT 57.161 30.769 0.00 0.00 0.00 1.40
2717 3550 8.838649 AAACATACTCCCATAGGCTTTTATTT 57.161 30.769 0.00 0.00 0.00 1.40
2718 3551 9.930158 AAACATACTCCCATAGGCTTTTATTTA 57.070 29.630 0.00 0.00 0.00 1.40
2720 3553 9.520515 ACATACTCCCATAGGCTTTTATTTATG 57.479 33.333 0.00 0.00 0.00 1.90
2721 3554 9.739276 CATACTCCCATAGGCTTTTATTTATGA 57.261 33.333 0.00 0.00 0.00 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.683069 AATATTCTTTCAACAAACATGTCAGAC 57.317 29.630 0.00 0.00 0.00 3.51
199 200 6.893020 AGAGATTCCCCTAACAACACTAAT 57.107 37.500 0.00 0.00 0.00 1.73
264 310 7.803189 CGCAGAGTTTCATAAACATGTACTTTT 59.197 33.333 0.00 0.00 43.79 2.27
268 314 6.241385 GTCGCAGAGTTTCATAAACATGTAC 58.759 40.000 0.00 0.00 43.79 2.90
273 319 3.071479 GGGTCGCAGAGTTTCATAAACA 58.929 45.455 5.42 0.00 43.79 2.83
275 321 3.071479 GTGGGTCGCAGAGTTTCATAAA 58.929 45.455 0.00 0.00 36.95 1.40
276 322 2.037902 TGTGGGTCGCAGAGTTTCATAA 59.962 45.455 0.00 0.00 36.95 1.90
277 323 1.621317 TGTGGGTCGCAGAGTTTCATA 59.379 47.619 0.00 0.00 36.95 2.15
278 324 0.396435 TGTGGGTCGCAGAGTTTCAT 59.604 50.000 0.00 0.00 36.95 2.57
280 326 0.033504 TCTGTGGGTCGCAGAGTTTC 59.966 55.000 12.93 0.00 44.56 2.78
281 327 2.133195 TCTGTGGGTCGCAGAGTTT 58.867 52.632 12.93 0.00 44.56 2.66
285 331 1.847328 TAATCTCTGTGGGTCGCAGA 58.153 50.000 10.23 10.23 46.76 4.26
286 332 2.166459 TCTTAATCTCTGTGGGTCGCAG 59.834 50.000 2.38 2.38 42.60 5.18
288 334 2.482142 CCTCTTAATCTCTGTGGGTCGC 60.482 54.545 0.00 0.00 0.00 5.19
289 335 2.101582 CCCTCTTAATCTCTGTGGGTCG 59.898 54.545 0.00 0.00 31.84 4.79
290 336 3.108376 ACCCTCTTAATCTCTGTGGGTC 58.892 50.000 0.00 0.00 42.07 4.46
292 338 2.840651 ACACCCTCTTAATCTCTGTGGG 59.159 50.000 0.00 0.00 39.59 4.61
293 339 4.559862 AACACCCTCTTAATCTCTGTGG 57.440 45.455 0.00 0.00 0.00 4.17
294 340 4.697352 CCAAACACCCTCTTAATCTCTGTG 59.303 45.833 0.00 0.00 0.00 3.66
296 342 4.911390 ACCAAACACCCTCTTAATCTCTG 58.089 43.478 0.00 0.00 0.00 3.35
297 343 5.073144 TGAACCAAACACCCTCTTAATCTCT 59.927 40.000 0.00 0.00 0.00 3.10
298 344 5.313712 TGAACCAAACACCCTCTTAATCTC 58.686 41.667 0.00 0.00 0.00 2.75
299 345 5.316987 CTGAACCAAACACCCTCTTAATCT 58.683 41.667 0.00 0.00 0.00 2.40
300 346 4.459337 CCTGAACCAAACACCCTCTTAATC 59.541 45.833 0.00 0.00 0.00 1.75
301 347 4.407365 CCTGAACCAAACACCCTCTTAAT 58.593 43.478 0.00 0.00 0.00 1.40
302 348 3.435890 CCCTGAACCAAACACCCTCTTAA 60.436 47.826 0.00 0.00 0.00 1.85
303 349 2.107552 CCCTGAACCAAACACCCTCTTA 59.892 50.000 0.00 0.00 0.00 2.10
304 350 1.133482 CCCTGAACCAAACACCCTCTT 60.133 52.381 0.00 0.00 0.00 2.85
305 351 0.478507 CCCTGAACCAAACACCCTCT 59.521 55.000 0.00 0.00 0.00 3.69
306 352 0.476771 TCCCTGAACCAAACACCCTC 59.523 55.000 0.00 0.00 0.00 4.30
307 353 0.185175 GTCCCTGAACCAAACACCCT 59.815 55.000 0.00 0.00 0.00 4.34
308 354 0.185175 AGTCCCTGAACCAAACACCC 59.815 55.000 0.00 0.00 0.00 4.61
309 355 2.067365 AAGTCCCTGAACCAAACACC 57.933 50.000 0.00 0.00 0.00 4.16
310 356 4.465632 AAAAAGTCCCTGAACCAAACAC 57.534 40.909 0.00 0.00 0.00 3.32
311 357 5.265989 ACTAAAAAGTCCCTGAACCAAACA 58.734 37.500 0.00 0.00 0.00 2.83
312 358 5.828747 GACTAAAAAGTCCCTGAACCAAAC 58.171 41.667 0.00 0.00 32.97 2.93
348 394 7.111136 TCCTAGGGACTTTTTAGGGATTTTT 57.889 36.000 9.46 0.00 41.75 1.94
349 395 6.730001 TCCTAGGGACTTTTTAGGGATTTT 57.270 37.500 9.46 0.00 41.75 1.82
350 396 6.491383 GTTCCTAGGGACTTTTTAGGGATTT 58.509 40.000 13.55 0.00 41.75 2.17
351 397 5.044328 GGTTCCTAGGGACTTTTTAGGGATT 60.044 44.000 20.08 0.00 41.75 3.01
352 398 4.477581 GGTTCCTAGGGACTTTTTAGGGAT 59.522 45.833 20.08 0.00 41.75 3.85
353 399 3.848377 GGTTCCTAGGGACTTTTTAGGGA 59.152 47.826 20.08 0.00 41.75 4.20
354 400 3.590182 TGGTTCCTAGGGACTTTTTAGGG 59.410 47.826 20.08 0.00 41.75 3.53
355 401 4.921644 TGGTTCCTAGGGACTTTTTAGG 57.078 45.455 20.08 0.00 41.75 2.69
356 402 5.180680 CGTTTGGTTCCTAGGGACTTTTTAG 59.819 44.000 20.08 4.22 41.75 1.85
357 403 5.065235 CGTTTGGTTCCTAGGGACTTTTTA 58.935 41.667 20.08 0.00 41.75 1.52
358 404 3.887110 CGTTTGGTTCCTAGGGACTTTTT 59.113 43.478 20.08 0.00 41.75 1.94
359 405 3.483421 CGTTTGGTTCCTAGGGACTTTT 58.517 45.455 20.08 0.00 41.75 2.27
360 406 2.224695 CCGTTTGGTTCCTAGGGACTTT 60.225 50.000 20.08 0.00 41.75 2.66
361 407 1.350019 CCGTTTGGTTCCTAGGGACTT 59.650 52.381 20.08 0.00 41.75 3.01
362 408 0.981943 CCGTTTGGTTCCTAGGGACT 59.018 55.000 20.08 0.00 46.37 3.85
363 409 0.035725 CCCGTTTGGTTCCTAGGGAC 60.036 60.000 12.35 12.35 41.26 4.46
364 410 0.178897 TCCCGTTTGGTTCCTAGGGA 60.179 55.000 9.46 0.00 44.85 4.20
365 411 0.252197 CTCCCGTTTGGTTCCTAGGG 59.748 60.000 9.46 0.00 40.16 3.53
366 412 0.252197 CCTCCCGTTTGGTTCCTAGG 59.748 60.000 0.82 0.82 34.77 3.02
367 413 0.252197 CCCTCCCGTTTGGTTCCTAG 59.748 60.000 0.00 0.00 34.77 3.02
368 414 0.178897 TCCCTCCCGTTTGGTTCCTA 60.179 55.000 0.00 0.00 34.77 2.94
369 415 1.462627 TCCCTCCCGTTTGGTTCCT 60.463 57.895 0.00 0.00 34.77 3.36
370 416 1.303074 GTCCCTCCCGTTTGGTTCC 60.303 63.158 0.00 0.00 34.77 3.62
371 417 0.109913 AAGTCCCTCCCGTTTGGTTC 59.890 55.000 0.00 0.00 34.77 3.62
372 418 0.554305 AAAGTCCCTCCCGTTTGGTT 59.446 50.000 0.00 0.00 34.77 3.67
373 419 0.554305 AAAAGTCCCTCCCGTTTGGT 59.446 50.000 0.00 0.00 34.77 3.67
374 420 1.611977 GAAAAAGTCCCTCCCGTTTGG 59.388 52.381 0.00 0.00 0.00 3.28
375 421 2.583143 AGAAAAAGTCCCTCCCGTTTG 58.417 47.619 0.00 0.00 0.00 2.93
376 422 3.136992 TGTAGAAAAAGTCCCTCCCGTTT 59.863 43.478 0.00 0.00 0.00 3.60
377 423 2.707257 TGTAGAAAAAGTCCCTCCCGTT 59.293 45.455 0.00 0.00 0.00 4.44
378 424 2.302157 CTGTAGAAAAAGTCCCTCCCGT 59.698 50.000 0.00 0.00 0.00 5.28
379 425 2.354805 CCTGTAGAAAAAGTCCCTCCCG 60.355 54.545 0.00 0.00 0.00 5.14
380 426 2.026169 CCCTGTAGAAAAAGTCCCTCCC 60.026 54.545 0.00 0.00 0.00 4.30
381 427 2.910977 TCCCTGTAGAAAAAGTCCCTCC 59.089 50.000 0.00 0.00 0.00 4.30
382 428 3.583526 AGTCCCTGTAGAAAAAGTCCCTC 59.416 47.826 0.00 0.00 0.00 4.30
383 429 3.599348 AGTCCCTGTAGAAAAAGTCCCT 58.401 45.455 0.00 0.00 0.00 4.20
384 430 4.776308 TCTAGTCCCTGTAGAAAAAGTCCC 59.224 45.833 0.00 0.00 0.00 4.46
385 431 5.997384 TCTAGTCCCTGTAGAAAAAGTCC 57.003 43.478 0.00 0.00 0.00 3.85
391 437 7.509659 AGAGTCTTTTTCTAGTCCCTGTAGAAA 59.490 37.037 1.96 1.96 42.24 2.52
392 438 7.011382 AGAGTCTTTTTCTAGTCCCTGTAGAA 58.989 38.462 0.00 0.00 35.21 2.10
393 439 6.553857 AGAGTCTTTTTCTAGTCCCTGTAGA 58.446 40.000 0.00 0.00 0.00 2.59
394 440 6.844097 AGAGTCTTTTTCTAGTCCCTGTAG 57.156 41.667 0.00 0.00 0.00 2.74
395 441 7.468496 AGTAGAGTCTTTTTCTAGTCCCTGTA 58.532 38.462 0.00 0.00 0.00 2.74
396 442 6.316513 AGTAGAGTCTTTTTCTAGTCCCTGT 58.683 40.000 0.00 0.00 0.00 4.00
397 443 6.844097 AGTAGAGTCTTTTTCTAGTCCCTG 57.156 41.667 0.00 0.00 0.00 4.45
398 444 8.953223 TTTAGTAGAGTCTTTTTCTAGTCCCT 57.047 34.615 0.00 0.00 33.84 4.20
399 445 9.022884 TCTTTAGTAGAGTCTTTTTCTAGTCCC 57.977 37.037 0.00 0.00 33.84 4.46
448 494 9.930693 TCAGAATTTCTAGGACTTTTTCTAGTC 57.069 33.333 0.00 0.00 43.05 2.59
451 497 9.503399 GGTTCAGAATTTCTAGGACTTTTTCTA 57.497 33.333 0.00 0.00 0.00 2.10
452 498 7.998964 TGGTTCAGAATTTCTAGGACTTTTTCT 59.001 33.333 0.00 0.00 0.00 2.52
453 499 8.166422 TGGTTCAGAATTTCTAGGACTTTTTC 57.834 34.615 0.00 0.00 0.00 2.29
454 500 8.533569 TTGGTTCAGAATTTCTAGGACTTTTT 57.466 30.769 0.00 0.00 0.00 1.94
455 501 8.414003 GTTTGGTTCAGAATTTCTAGGACTTTT 58.586 33.333 0.00 0.00 0.00 2.27
456 502 7.559897 TGTTTGGTTCAGAATTTCTAGGACTTT 59.440 33.333 0.00 0.00 0.00 2.66
457 503 7.013369 GTGTTTGGTTCAGAATTTCTAGGACTT 59.987 37.037 0.00 0.00 0.00 3.01
458 504 6.486993 GTGTTTGGTTCAGAATTTCTAGGACT 59.513 38.462 0.00 0.00 0.00 3.85
459 505 6.294010 GGTGTTTGGTTCAGAATTTCTAGGAC 60.294 42.308 0.00 0.00 0.00 3.85
460 506 5.768164 GGTGTTTGGTTCAGAATTTCTAGGA 59.232 40.000 0.00 0.00 0.00 2.94
461 507 5.048013 GGGTGTTTGGTTCAGAATTTCTAGG 60.048 44.000 0.00 0.00 0.00 3.02
462 508 5.048013 GGGGTGTTTGGTTCAGAATTTCTAG 60.048 44.000 0.00 0.00 0.00 2.43
463 509 4.830600 GGGGTGTTTGGTTCAGAATTTCTA 59.169 41.667 0.00 0.00 0.00 2.10
464 510 3.641436 GGGGTGTTTGGTTCAGAATTTCT 59.359 43.478 0.00 0.00 0.00 2.52
465 511 3.244078 GGGGGTGTTTGGTTCAGAATTTC 60.244 47.826 0.00 0.00 0.00 2.17
466 512 2.703536 GGGGGTGTTTGGTTCAGAATTT 59.296 45.455 0.00 0.00 0.00 1.82
467 513 2.090775 AGGGGGTGTTTGGTTCAGAATT 60.091 45.455 0.00 0.00 0.00 2.17
468 514 1.503347 AGGGGGTGTTTGGTTCAGAAT 59.497 47.619 0.00 0.00 0.00 2.40
469 515 0.930726 AGGGGGTGTTTGGTTCAGAA 59.069 50.000 0.00 0.00 0.00 3.02
470 516 0.184933 CAGGGGGTGTTTGGTTCAGA 59.815 55.000 0.00 0.00 0.00 3.27
471 517 0.184933 TCAGGGGGTGTTTGGTTCAG 59.815 55.000 0.00 0.00 0.00 3.02
472 518 0.631753 TTCAGGGGGTGTTTGGTTCA 59.368 50.000 0.00 0.00 0.00 3.18
473 519 1.037493 GTTCAGGGGGTGTTTGGTTC 58.963 55.000 0.00 0.00 0.00 3.62
474 520 0.336737 TGTTCAGGGGGTGTTTGGTT 59.663 50.000 0.00 0.00 0.00 3.67
475 521 0.106217 CTGTTCAGGGGGTGTTTGGT 60.106 55.000 0.00 0.00 0.00 3.67
476 522 0.184933 TCTGTTCAGGGGGTGTTTGG 59.815 55.000 0.00 0.00 0.00 3.28
477 523 1.142870 TCTCTGTTCAGGGGGTGTTTG 59.857 52.381 0.00 0.00 0.00 2.93
478 524 1.143073 GTCTCTGTTCAGGGGGTGTTT 59.857 52.381 0.00 0.00 0.00 2.83
479 525 0.765510 GTCTCTGTTCAGGGGGTGTT 59.234 55.000 0.00 0.00 0.00 3.32
480 526 0.399949 TGTCTCTGTTCAGGGGGTGT 60.400 55.000 0.00 0.00 0.00 4.16
481 527 0.987294 ATGTCTCTGTTCAGGGGGTG 59.013 55.000 0.00 0.00 0.00 4.61
482 528 0.987294 CATGTCTCTGTTCAGGGGGT 59.013 55.000 0.00 0.00 0.00 4.95
483 529 0.987294 ACATGTCTCTGTTCAGGGGG 59.013 55.000 0.00 0.00 0.00 5.40
484 530 2.867109 AACATGTCTCTGTTCAGGGG 57.133 50.000 0.00 0.00 34.26 4.79
485 531 5.491070 TCATAAACATGTCTCTGTTCAGGG 58.509 41.667 0.00 0.00 38.38 4.45
486 532 6.312426 GTCTCATAAACATGTCTCTGTTCAGG 59.688 42.308 0.00 0.00 38.38 3.86
487 533 6.870439 TGTCTCATAAACATGTCTCTGTTCAG 59.130 38.462 0.00 0.00 38.38 3.02
488 534 6.646653 GTGTCTCATAAACATGTCTCTGTTCA 59.353 38.462 0.00 0.00 38.38 3.18
489 535 6.646653 TGTGTCTCATAAACATGTCTCTGTTC 59.353 38.462 0.00 0.00 38.38 3.18
490 536 6.524734 TGTGTCTCATAAACATGTCTCTGTT 58.475 36.000 0.00 0.00 41.01 3.16
509 555 0.611714 AAGTACCGGGTCCATGTGTC 59.388 55.000 6.32 0.00 0.00 3.67
541 595 0.704076 TATTTGAGGGCAGCTTGGGT 59.296 50.000 0.00 0.00 0.00 4.51
599 654 1.160329 GCTGCGGGCAGTTATACCAG 61.160 60.000 20.66 0.00 45.24 4.00
655 714 3.621715 GCCGTGGGACAGAGTAAATTTAG 59.378 47.826 0.00 0.00 41.80 1.85
661 720 2.642254 CGGCCGTGGGACAGAGTAA 61.642 63.158 19.50 0.00 41.80 2.24
670 729 3.233259 AAAATTTGCCGGCCGTGGG 62.233 57.895 26.77 10.30 0.00 4.61
671 730 1.736282 GAAAATTTGCCGGCCGTGG 60.736 57.895 26.77 11.15 0.00 4.94
695 1039 7.186021 ACGCTCGTTGATTAATTTATTAGGG 57.814 36.000 0.00 0.00 0.00 3.53
786 1162 1.583495 GGTGGTAAACGAAGCCTGCC 61.583 60.000 0.00 0.00 0.00 4.85
787 1163 0.605589 AGGTGGTAAACGAAGCCTGC 60.606 55.000 0.00 0.00 0.00 4.85
788 1164 1.439679 GAGGTGGTAAACGAAGCCTG 58.560 55.000 0.00 0.00 0.00 4.85
789 1165 0.037605 CGAGGTGGTAAACGAAGCCT 60.038 55.000 0.00 0.00 0.00 4.58
830 1211 1.938585 TTATATGGGGGAGCCGAGAG 58.061 55.000 0.00 0.00 0.00 3.20
873 1270 4.492570 CGCGTGACTAATTTGGATTCTGAC 60.493 45.833 0.00 0.00 0.00 3.51
884 1281 2.735134 GGAGTTTGTCGCGTGACTAATT 59.265 45.455 27.76 22.63 45.70 1.40
886 1283 1.774639 GGAGTTTGTCGCGTGACTAA 58.225 50.000 27.76 23.58 45.70 2.24
888 1285 1.660575 CGGAGTTTGTCGCGTGACT 60.661 57.895 27.76 9.45 45.70 3.41
889 1286 2.654912 CCGGAGTTTGTCGCGTGAC 61.655 63.158 22.00 22.00 45.71 3.67
890 1287 2.355363 CCGGAGTTTGTCGCGTGA 60.355 61.111 5.77 0.00 0.00 4.35
929 1326 2.202824 TTATCGGCCCGTTGCTCG 60.203 61.111 1.63 0.00 40.92 5.03
930 1327 2.534903 GCTTATCGGCCCGTTGCTC 61.535 63.158 1.63 0.00 40.92 4.26
931 1328 1.682451 TAGCTTATCGGCCCGTTGCT 61.682 55.000 1.63 11.14 40.92 3.91
932 1329 1.222115 CTAGCTTATCGGCCCGTTGC 61.222 60.000 1.63 3.67 40.16 4.17
933 1330 1.222115 GCTAGCTTATCGGCCCGTTG 61.222 60.000 7.70 0.00 0.00 4.10
934 1331 1.069258 GCTAGCTTATCGGCCCGTT 59.931 57.895 7.70 0.00 0.00 4.44
935 1332 0.538977 TAGCTAGCTTATCGGCCCGT 60.539 55.000 24.88 0.00 0.00 5.28
936 1333 0.171455 CTAGCTAGCTTATCGGCCCG 59.829 60.000 24.88 0.00 0.00 6.13
937 1334 0.108567 GCTAGCTAGCTTATCGGCCC 60.109 60.000 33.71 5.30 45.62 5.80
938 1335 3.427309 GCTAGCTAGCTTATCGGCC 57.573 57.895 33.71 6.02 45.62 6.13
965 1362 2.973180 GATTCCTGTACCGCGGAGGC 62.973 65.000 35.90 20.84 46.52 4.70
970 1367 1.995991 CGTTGATTCCTGTACCGCG 59.004 57.895 0.00 0.00 0.00 6.46
972 1369 1.995991 CGCGTTGATTCCTGTACCG 59.004 57.895 0.00 0.00 0.00 4.02
992 1389 3.728373 AGTTCCCCATGCCCGGAC 61.728 66.667 0.73 0.00 0.00 4.79
993 1390 3.727258 CAGTTCCCCATGCCCGGA 61.727 66.667 0.73 0.00 0.00 5.14
1053 1497 4.717629 CGCTCGACCTTGCCGTCA 62.718 66.667 0.00 0.00 32.74 4.35
1182 1635 0.612174 CACCTCCTCCTTCTCCGACA 60.612 60.000 0.00 0.00 0.00 4.35
1184 1637 1.682684 GCACCTCCTCCTTCTCCGA 60.683 63.158 0.00 0.00 0.00 4.55
1299 1752 3.855255 TCCAATGGCGGATTCAGAATA 57.145 42.857 0.00 0.00 0.00 1.75
1324 1815 1.727335 CGGAGAAGAAGCGAAAGGAAC 59.273 52.381 0.00 0.00 0.00 3.62
1354 1847 8.051901 TCGACTGATTAATCTCTGTGAGTAAA 57.948 34.615 16.24 0.51 38.48 2.01
1372 1905 2.157474 CACGCACAAATTGATCGACTGA 59.843 45.455 15.32 0.00 0.00 3.41
1375 1908 1.250476 GCACGCACAAATTGATCGAC 58.750 50.000 15.32 6.30 0.00 4.20
1762 2327 1.375140 CTTTGCTGCTCCTCTCGCA 60.375 57.895 0.00 0.00 35.80 5.10
1855 2428 2.172483 GAAAGCAGGGCAGAGACCGA 62.172 60.000 0.00 0.00 34.63 4.69
1859 2432 1.059098 TTCAGAAAGCAGGGCAGAGA 58.941 50.000 0.00 0.00 0.00 3.10
1865 2438 2.026449 AGACCAGATTCAGAAAGCAGGG 60.026 50.000 0.00 0.00 32.16 4.45
1964 2546 4.402056 TCGATCTCAACCTGGATAAACC 57.598 45.455 0.00 0.00 39.54 3.27
1965 2547 5.237344 CCATTCGATCTCAACCTGGATAAAC 59.763 44.000 0.00 0.00 0.00 2.01
1966 2548 5.104527 ACCATTCGATCTCAACCTGGATAAA 60.105 40.000 0.00 0.00 0.00 1.40
1967 2549 4.408921 ACCATTCGATCTCAACCTGGATAA 59.591 41.667 0.00 0.00 0.00 1.75
1968 2550 3.967326 ACCATTCGATCTCAACCTGGATA 59.033 43.478 0.00 0.00 0.00 2.59
1969 2551 2.774234 ACCATTCGATCTCAACCTGGAT 59.226 45.455 0.00 0.00 0.00 3.41
1970 2552 2.187958 ACCATTCGATCTCAACCTGGA 58.812 47.619 0.00 0.00 0.00 3.86
1971 2553 2.698855 ACCATTCGATCTCAACCTGG 57.301 50.000 0.00 0.00 0.00 4.45
1972 2554 5.237344 GGATAAACCATTCGATCTCAACCTG 59.763 44.000 0.00 0.00 38.79 4.00
1973 2555 5.104527 TGGATAAACCATTCGATCTCAACCT 60.105 40.000 0.00 0.00 44.64 3.50
1974 2556 5.123227 TGGATAAACCATTCGATCTCAACC 58.877 41.667 0.00 0.00 44.64 3.77
2035 2620 1.338769 GGTAACACAATGAGGCTCCGT 60.339 52.381 12.86 3.68 0.00 4.69
2038 2624 4.575885 TGTAAGGTAACACAATGAGGCTC 58.424 43.478 7.79 7.79 41.41 4.70
2039 2625 4.634012 TGTAAGGTAACACAATGAGGCT 57.366 40.909 0.00 0.00 41.41 4.58
2061 2657 8.341903 CAATAAAGACACATTGTAGTGACACAA 58.658 33.333 8.59 3.75 42.05 3.33
2062 2658 7.497579 ACAATAAAGACACATTGTAGTGACACA 59.502 33.333 8.59 0.00 42.17 3.72
2064 2660 7.519809 GCACAATAAAGACACATTGTAGTGACA 60.520 37.037 0.57 0.00 42.09 3.58
2066 2662 6.710295 AGCACAATAAAGACACATTGTAGTGA 59.290 34.615 0.57 0.00 42.09 3.41
2067 2663 6.902341 AGCACAATAAAGACACATTGTAGTG 58.098 36.000 0.04 0.00 42.09 2.74
2068 2664 6.710295 TGAGCACAATAAAGACACATTGTAGT 59.290 34.615 0.04 0.00 42.09 2.73
2069 2665 7.132694 TGAGCACAATAAAGACACATTGTAG 57.867 36.000 0.04 0.00 42.09 2.74
2070 2666 7.686438 ATGAGCACAATAAAGACACATTGTA 57.314 32.000 0.04 0.00 42.09 2.41
2072 2668 6.309494 CCAATGAGCACAATAAAGACACATTG 59.691 38.462 0.00 0.00 40.52 2.82
2073 2669 6.392354 CCAATGAGCACAATAAAGACACATT 58.608 36.000 0.00 0.00 0.00 2.71
2076 2672 4.380867 CCCCAATGAGCACAATAAAGACAC 60.381 45.833 0.00 0.00 0.00 3.67
2078 2674 4.016444 TCCCCAATGAGCACAATAAAGAC 58.984 43.478 0.00 0.00 0.00 3.01
2079 2675 4.314522 TCCCCAATGAGCACAATAAAGA 57.685 40.909 0.00 0.00 0.00 2.52
2080 2676 6.906157 ATATCCCCAATGAGCACAATAAAG 57.094 37.500 0.00 0.00 0.00 1.85
2084 2680 5.323382 TGTATATCCCCAATGAGCACAAT 57.677 39.130 0.00 0.00 0.00 2.71
2085 2681 4.787135 TGTATATCCCCAATGAGCACAA 57.213 40.909 0.00 0.00 0.00 3.33
2095 2701 3.440127 TCTGCATCGATGTATATCCCCA 58.560 45.455 25.47 11.76 0.00 4.96
2097 2703 5.877012 ACATTTCTGCATCGATGTATATCCC 59.123 40.000 25.47 8.46 31.41 3.85
2098 2704 6.591448 TGACATTTCTGCATCGATGTATATCC 59.409 38.462 25.47 9.16 33.21 2.59
2099 2705 7.586714 TGACATTTCTGCATCGATGTATATC 57.413 36.000 25.47 9.86 33.21 1.63
2101 2707 7.967890 AATGACATTTCTGCATCGATGTATA 57.032 32.000 25.47 12.15 33.21 1.47
2102 2708 6.872628 AATGACATTTCTGCATCGATGTAT 57.127 33.333 25.47 6.01 33.21 2.29
2103 2709 6.760770 TGTAATGACATTTCTGCATCGATGTA 59.239 34.615 25.47 20.68 33.21 2.29
2169 2779 7.639113 AACTGAAACTTAAGTTGAATGGTGA 57.361 32.000 21.22 0.00 38.44 4.02
2170 2780 8.702163 AAAACTGAAACTTAAGTTGAATGGTG 57.298 30.769 21.22 9.95 38.44 4.17
2171 2781 8.527810 TGAAAACTGAAACTTAAGTTGAATGGT 58.472 29.630 21.22 12.57 38.44 3.55
2172 2782 8.925161 TGAAAACTGAAACTTAAGTTGAATGG 57.075 30.769 21.22 12.02 38.44 3.16
2173 2783 9.573133 ACTGAAAACTGAAACTTAAGTTGAATG 57.427 29.630 21.22 13.60 38.44 2.67
2175 2785 9.620660 GAACTGAAAACTGAAACTTAAGTTGAA 57.379 29.630 21.22 11.55 38.44 2.69
2176 2786 8.788806 TGAACTGAAAACTGAAACTTAAGTTGA 58.211 29.630 21.22 10.35 38.44 3.18
2204 3003 0.388520 GTGCCCGCCACTTTGAAATC 60.389 55.000 0.00 0.00 41.35 2.17
2205 3004 1.665442 GTGCCCGCCACTTTGAAAT 59.335 52.632 0.00 0.00 41.35 2.17
2206 3005 2.840066 CGTGCCCGCCACTTTGAAA 61.840 57.895 3.49 0.00 42.42 2.69
2207 3006 3.283684 CGTGCCCGCCACTTTGAA 61.284 61.111 3.49 0.00 42.42 2.69
2209 3008 2.999363 GAAACGTGCCCGCCACTTTG 62.999 60.000 0.00 0.00 42.42 2.77
2217 3020 1.068474 CTTAGTGAGAAACGTGCCCG 58.932 55.000 0.00 0.00 40.83 6.13
2218 3021 2.450609 TCTTAGTGAGAAACGTGCCC 57.549 50.000 0.00 0.00 0.00 5.36
2227 3034 5.127845 GGTCTGACCATTCATCTTAGTGAGA 59.872 44.000 21.70 0.00 38.42 3.27
2231 3038 3.430929 GCGGTCTGACCATTCATCTTAGT 60.431 47.826 25.42 0.00 38.47 2.24
2255 3066 8.669946 TTTAAAGTTTTTCAATCCATTGACCC 57.330 30.769 1.28 0.00 45.63 4.46
2265 3076 7.416817 GCATGGCACTTTTAAAGTTTTTCAAT 58.583 30.769 7.71 0.00 40.46 2.57
2266 3077 6.183360 GGCATGGCACTTTTAAAGTTTTTCAA 60.183 34.615 15.47 0.00 40.46 2.69
2268 3079 5.527214 AGGCATGGCACTTTTAAAGTTTTTC 59.473 36.000 22.64 0.00 40.46 2.29
2269 3080 5.436175 AGGCATGGCACTTTTAAAGTTTTT 58.564 33.333 22.64 0.00 40.46 1.94
2274 3085 5.643379 TCTTAGGCATGGCACTTTTAAAG 57.357 39.130 22.64 11.88 0.00 1.85
2278 3106 4.380867 CGAATTCTTAGGCATGGCACTTTT 60.381 41.667 22.64 6.94 0.00 2.27
2283 3111 1.024271 GCGAATTCTTAGGCATGGCA 58.976 50.000 22.64 4.62 0.00 4.92
2288 3116 2.290641 TGGGAAAGCGAATTCTTAGGCA 60.291 45.455 3.52 0.00 0.00 4.75
2293 3121 5.467035 TTTGAATGGGAAAGCGAATTCTT 57.533 34.783 3.52 0.00 31.66 2.52
2349 3177 5.908562 TGGAGCTAGTAGTAGTACTCCAT 57.091 43.478 21.30 1.32 46.56 3.41
2530 3363 2.177977 GAGCTCATGTCAACGTACTCG 58.822 52.381 9.40 0.00 43.34 4.18
2550 3383 3.583882 AAGGTGGCCCATCCGGTTG 62.584 63.158 0.00 2.69 37.80 3.77
2562 3395 2.981560 GCGCCATGTGTCAAGGTGG 61.982 63.158 0.00 0.00 33.93 4.61
2573 3406 3.443045 GGACCAAGTGGCGCCATG 61.443 66.667 35.23 27.18 39.32 3.66
2574 3407 3.628646 GAGGACCAAGTGGCGCCAT 62.629 63.158 35.23 17.32 39.32 4.40
2575 3408 4.329545 GAGGACCAAGTGGCGCCA 62.330 66.667 29.03 29.03 39.32 5.69
2576 3409 3.842925 TTGAGGACCAAGTGGCGCC 62.843 63.158 22.73 22.73 39.32 6.53
2577 3410 1.244019 AATTGAGGACCAAGTGGCGC 61.244 55.000 0.00 0.00 38.31 6.53
2578 3411 1.068333 CAAATTGAGGACCAAGTGGCG 60.068 52.381 0.00 0.00 38.31 5.69
2579 3412 1.273327 CCAAATTGAGGACCAAGTGGC 59.727 52.381 0.00 0.00 37.19 5.01
2580 3413 1.895131 CCCAAATTGAGGACCAAGTGG 59.105 52.381 0.00 0.00 40.74 4.00
2581 3414 1.273327 GCCCAAATTGAGGACCAAGTG 59.727 52.381 0.00 0.00 38.31 3.16
2582 3415 1.133199 TGCCCAAATTGAGGACCAAGT 60.133 47.619 0.00 0.00 38.31 3.16
2583 3416 1.631405 TGCCCAAATTGAGGACCAAG 58.369 50.000 0.00 0.00 38.31 3.61
2584 3417 2.094100 TTGCCCAAATTGAGGACCAA 57.906 45.000 0.00 0.28 39.41 3.67
2585 3418 2.094100 TTTGCCCAAATTGAGGACCA 57.906 45.000 0.00 0.00 0.00 4.02
2586 3419 2.549992 GGTTTTGCCCAAATTGAGGACC 60.550 50.000 0.00 0.00 0.00 4.46
2587 3420 2.766313 GGTTTTGCCCAAATTGAGGAC 58.234 47.619 0.00 0.00 0.00 3.85
2599 3432 1.384525 GTTGGGTTTTGGGTTTTGCC 58.615 50.000 0.00 0.00 0.00 4.52
2600 3433 1.010580 CGTTGGGTTTTGGGTTTTGC 58.989 50.000 0.00 0.00 0.00 3.68
2601 3434 1.010580 GCGTTGGGTTTTGGGTTTTG 58.989 50.000 0.00 0.00 0.00 2.44
2602 3435 0.906066 AGCGTTGGGTTTTGGGTTTT 59.094 45.000 0.00 0.00 0.00 2.43
2603 3436 0.906066 AAGCGTTGGGTTTTGGGTTT 59.094 45.000 0.00 0.00 0.00 3.27
2604 3437 1.777941 TAAGCGTTGGGTTTTGGGTT 58.222 45.000 0.00 0.00 35.15 4.11
2605 3438 1.616374 CATAAGCGTTGGGTTTTGGGT 59.384 47.619 0.00 0.00 35.15 4.51
2606 3439 1.067213 CCATAAGCGTTGGGTTTTGGG 60.067 52.381 7.37 0.00 44.19 4.12
2607 3440 2.362169 CCATAAGCGTTGGGTTTTGG 57.638 50.000 2.11 2.11 43.12 3.28
2608 3441 1.671556 GGCCATAAGCGTTGGGTTTTG 60.672 52.381 0.00 0.00 45.17 2.44
2609 3442 0.606096 GGCCATAAGCGTTGGGTTTT 59.394 50.000 0.00 0.00 45.17 2.43
2610 3443 1.254975 GGGCCATAAGCGTTGGGTTT 61.255 55.000 4.39 0.00 45.17 3.27
2611 3444 1.680989 GGGCCATAAGCGTTGGGTT 60.681 57.895 4.39 0.00 45.17 4.11
2612 3445 2.044352 GGGCCATAAGCGTTGGGT 60.044 61.111 4.39 0.00 45.17 4.51
2613 3446 2.044451 TGGGCCATAAGCGTTGGG 60.044 61.111 0.00 0.00 45.17 4.12
2614 3447 2.414785 GGTGGGCCATAAGCGTTGG 61.415 63.158 10.70 0.00 45.17 3.77
2615 3448 1.247419 TTGGTGGGCCATAAGCGTTG 61.247 55.000 10.70 0.00 45.56 4.10
2616 3449 0.540830 TTTGGTGGGCCATAAGCGTT 60.541 50.000 10.70 0.00 45.56 4.84
2617 3450 0.324275 ATTTGGTGGGCCATAAGCGT 60.324 50.000 10.70 0.00 45.56 5.07
2618 3451 0.823460 AATTTGGTGGGCCATAAGCG 59.177 50.000 10.70 0.00 45.56 4.68
2619 3452 1.554617 ACAATTTGGTGGGCCATAAGC 59.445 47.619 10.70 0.00 45.56 3.09
2620 3453 2.677613 GCACAATTTGGTGGGCCATAAG 60.678 50.000 10.70 0.00 45.56 1.73
2621 3454 1.277557 GCACAATTTGGTGGGCCATAA 59.722 47.619 10.70 5.70 45.56 1.90
2622 3455 0.901124 GCACAATTTGGTGGGCCATA 59.099 50.000 10.70 0.00 45.56 2.74
2623 3456 1.678724 GCACAATTTGGTGGGCCAT 59.321 52.632 10.70 0.00 45.56 4.40
2624 3457 3.146182 GCACAATTTGGTGGGCCA 58.854 55.556 0.00 0.00 42.41 5.36
2630 3463 2.297033 CTGGTTAGCAGCACAATTTGGT 59.703 45.455 0.00 0.00 35.87 3.67
2631 3464 2.297033 ACTGGTTAGCAGCACAATTTGG 59.703 45.455 11.64 0.00 0.00 3.28
2632 3465 3.648339 ACTGGTTAGCAGCACAATTTG 57.352 42.857 11.64 0.00 0.00 2.32
2633 3466 5.782893 TTTACTGGTTAGCAGCACAATTT 57.217 34.783 11.64 0.00 0.00 1.82
2634 3467 5.301805 AGTTTTACTGGTTAGCAGCACAATT 59.698 36.000 11.64 0.00 0.00 2.32
2635 3468 4.827284 AGTTTTACTGGTTAGCAGCACAAT 59.173 37.500 11.64 0.00 0.00 2.71
2636 3469 4.204012 AGTTTTACTGGTTAGCAGCACAA 58.796 39.130 11.64 0.76 0.00 3.33
2637 3470 3.815809 AGTTTTACTGGTTAGCAGCACA 58.184 40.909 11.64 0.00 0.00 4.57
2638 3471 4.274950 TGAAGTTTTACTGGTTAGCAGCAC 59.725 41.667 11.64 3.76 0.00 4.40
2639 3472 4.456535 TGAAGTTTTACTGGTTAGCAGCA 58.543 39.130 11.64 0.00 0.00 4.41
2640 3473 4.083271 CCTGAAGTTTTACTGGTTAGCAGC 60.083 45.833 11.64 0.00 0.00 5.25
2641 3474 4.083271 GCCTGAAGTTTTACTGGTTAGCAG 60.083 45.833 10.09 10.09 0.00 4.24
2642 3475 3.818773 GCCTGAAGTTTTACTGGTTAGCA 59.181 43.478 0.00 0.00 0.00 3.49
2643 3476 3.190744 GGCCTGAAGTTTTACTGGTTAGC 59.809 47.826 0.00 0.00 0.00 3.09
2644 3477 4.652822 AGGCCTGAAGTTTTACTGGTTAG 58.347 43.478 3.11 0.00 0.00 2.34
2645 3478 4.349930 AGAGGCCTGAAGTTTTACTGGTTA 59.650 41.667 12.00 0.00 0.00 2.85
2646 3479 3.138468 AGAGGCCTGAAGTTTTACTGGTT 59.862 43.478 12.00 0.00 0.00 3.67
2647 3480 2.711547 AGAGGCCTGAAGTTTTACTGGT 59.288 45.455 12.00 0.00 0.00 4.00
2648 3481 3.008485 AGAGAGGCCTGAAGTTTTACTGG 59.992 47.826 12.00 0.00 0.00 4.00
2649 3482 4.020662 AGAGAGAGGCCTGAAGTTTTACTG 60.021 45.833 12.00 0.00 0.00 2.74
2650 3483 4.164204 AGAGAGAGGCCTGAAGTTTTACT 58.836 43.478 12.00 0.00 0.00 2.24
2651 3484 4.545208 AGAGAGAGGCCTGAAGTTTTAC 57.455 45.455 12.00 0.00 0.00 2.01
2652 3485 5.071788 TGAAAGAGAGAGGCCTGAAGTTTTA 59.928 40.000 12.00 0.00 0.00 1.52
2653 3486 4.141390 TGAAAGAGAGAGGCCTGAAGTTTT 60.141 41.667 12.00 5.32 0.00 2.43
2654 3487 3.392616 TGAAAGAGAGAGGCCTGAAGTTT 59.607 43.478 12.00 2.82 0.00 2.66
2655 3488 2.975489 TGAAAGAGAGAGGCCTGAAGTT 59.025 45.455 12.00 0.00 0.00 2.66
2656 3489 2.301583 GTGAAAGAGAGAGGCCTGAAGT 59.698 50.000 12.00 0.00 0.00 3.01
2657 3490 2.673610 CGTGAAAGAGAGAGGCCTGAAG 60.674 54.545 12.00 0.00 0.00 3.02
2658 3491 1.273606 CGTGAAAGAGAGAGGCCTGAA 59.726 52.381 12.00 0.00 0.00 3.02
2659 3492 0.891373 CGTGAAAGAGAGAGGCCTGA 59.109 55.000 12.00 0.00 0.00 3.86
2660 3493 0.605589 ACGTGAAAGAGAGAGGCCTG 59.394 55.000 12.00 0.00 0.00 4.85
2661 3494 0.605589 CACGTGAAAGAGAGAGGCCT 59.394 55.000 10.90 3.86 0.00 5.19
2662 3495 0.603569 TCACGTGAAAGAGAGAGGCC 59.396 55.000 17.62 0.00 0.00 5.19
2663 3496 1.000163 TGTCACGTGAAAGAGAGAGGC 60.000 52.381 21.95 4.08 0.00 4.70
2664 3497 3.371102 TTGTCACGTGAAAGAGAGAGG 57.629 47.619 21.95 0.00 0.00 3.69
2665 3498 5.277058 CCTTTTTGTCACGTGAAAGAGAGAG 60.277 44.000 21.95 11.89 32.29 3.20
2666 3499 4.570772 CCTTTTTGTCACGTGAAAGAGAGA 59.429 41.667 21.95 0.00 32.29 3.10
2667 3500 4.570772 TCCTTTTTGTCACGTGAAAGAGAG 59.429 41.667 21.95 14.50 32.29 3.20
2668 3501 4.509616 TCCTTTTTGTCACGTGAAAGAGA 58.490 39.130 21.95 15.11 32.29 3.10
2669 3502 4.875544 TCCTTTTTGTCACGTGAAAGAG 57.124 40.909 21.95 15.61 32.29 2.85
2670 3503 5.630661 TTTCCTTTTTGTCACGTGAAAGA 57.369 34.783 21.95 7.48 32.29 2.52
2671 3504 6.144724 TGTTTTTCCTTTTTGTCACGTGAAAG 59.855 34.615 21.95 19.01 0.00 2.62
2672 3505 5.983720 TGTTTTTCCTTTTTGTCACGTGAAA 59.016 32.000 21.95 13.24 0.00 2.69
2673 3506 5.529791 TGTTTTTCCTTTTTGTCACGTGAA 58.470 33.333 21.95 8.09 0.00 3.18
2674 3507 5.122512 TGTTTTTCCTTTTTGTCACGTGA 57.877 34.783 15.76 15.76 0.00 4.35
2675 3508 6.750039 AGTATGTTTTTCCTTTTTGTCACGTG 59.250 34.615 9.94 9.94 0.00 4.49
2676 3509 6.859017 AGTATGTTTTTCCTTTTTGTCACGT 58.141 32.000 0.00 0.00 0.00 4.49
2677 3510 6.416750 GGAGTATGTTTTTCCTTTTTGTCACG 59.583 38.462 0.00 0.00 0.00 4.35
2678 3511 6.700081 GGGAGTATGTTTTTCCTTTTTGTCAC 59.300 38.462 0.00 0.00 0.00 3.67
2679 3512 6.381420 TGGGAGTATGTTTTTCCTTTTTGTCA 59.619 34.615 0.00 0.00 0.00 3.58
2680 3513 6.811954 TGGGAGTATGTTTTTCCTTTTTGTC 58.188 36.000 0.00 0.00 0.00 3.18
2681 3514 6.800072 TGGGAGTATGTTTTTCCTTTTTGT 57.200 33.333 0.00 0.00 0.00 2.83
2682 3515 8.034804 CCTATGGGAGTATGTTTTTCCTTTTTG 58.965 37.037 0.00 0.00 33.58 2.44
2683 3516 7.310423 GCCTATGGGAGTATGTTTTTCCTTTTT 60.310 37.037 0.00 0.00 33.58 1.94
2684 3517 6.154534 GCCTATGGGAGTATGTTTTTCCTTTT 59.845 38.462 0.00 0.00 33.58 2.27
2685 3518 5.656859 GCCTATGGGAGTATGTTTTTCCTTT 59.343 40.000 0.00 0.00 33.58 3.11
2686 3519 5.044105 AGCCTATGGGAGTATGTTTTTCCTT 60.044 40.000 0.00 0.00 33.58 3.36
2687 3520 4.478686 AGCCTATGGGAGTATGTTTTTCCT 59.521 41.667 0.00 0.00 33.58 3.36
2688 3521 4.793201 AGCCTATGGGAGTATGTTTTTCC 58.207 43.478 0.00 0.00 33.58 3.13
2689 3522 6.775594 AAAGCCTATGGGAGTATGTTTTTC 57.224 37.500 0.00 0.00 33.58 2.29
2690 3523 8.838649 ATAAAAGCCTATGGGAGTATGTTTTT 57.161 30.769 0.00 0.00 33.58 1.94
2691 3524 8.838649 AATAAAAGCCTATGGGAGTATGTTTT 57.161 30.769 0.00 0.00 33.58 2.43
2692 3525 8.838649 AAATAAAAGCCTATGGGAGTATGTTT 57.161 30.769 0.00 0.00 33.58 2.83
2694 3527 9.520515 CATAAATAAAAGCCTATGGGAGTATGT 57.479 33.333 0.00 0.00 33.58 2.29
2695 3528 9.739276 TCATAAATAAAAGCCTATGGGAGTATG 57.261 33.333 0.00 0.00 33.58 2.39


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.