Multiple sequence alignment - TraesCS2D01G076600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G076600 chr2D 100.000 3441 0 0 1 3441 32762076 32765516 0.000000e+00 6355.0
1 TraesCS2D01G076600 chr2D 100.000 29 0 0 322 350 559899205 559899233 2.000000e-03 54.7
2 TraesCS2D01G076600 chr2D 80.488 82 5 8 322 394 501939502 501939423 6.000000e-03 52.8
3 TraesCS2D01G076600 chr2B 93.375 2098 90 21 566 2628 54439691 54441774 0.000000e+00 3059.0
4 TraesCS2D01G076600 chr2B 83.956 455 45 15 2997 3441 54442427 54442863 8.890000e-111 411.0
5 TraesCS2D01G076600 chr2A 90.949 2066 80 39 604 2589 35975359 35977397 0.000000e+00 2680.0
6 TraesCS2D01G076600 chr2A 83.559 888 97 30 2581 3433 35977592 35978465 0.000000e+00 785.0
7 TraesCS2D01G076600 chr2A 77.528 178 28 9 300 473 632432625 632432456 2.830000e-16 97.1
8 TraesCS2D01G076600 chr6A 83.140 344 42 13 3108 3441 32602594 32602257 2.010000e-77 300.0
9 TraesCS2D01G076600 chr6A 90.909 176 16 0 1178 1353 520355727 520355552 1.600000e-58 237.0
10 TraesCS2D01G076600 chr6A 91.176 170 15 0 1194 1363 500083777 500083608 7.430000e-57 231.0
11 TraesCS2D01G076600 chr3D 82.779 331 37 15 3106 3420 476476448 476476122 9.410000e-71 278.0
12 TraesCS2D01G076600 chr3D 84.211 95 14 1 1 94 61019095 61019001 1.320000e-14 91.6
13 TraesCS2D01G076600 chr7A 81.503 346 52 11 3107 3441 35679261 35678917 1.220000e-69 274.0
14 TraesCS2D01G076600 chr7A 89.888 178 18 0 1175 1352 177136144 177136321 2.670000e-56 230.0
15 TraesCS2D01G076600 chrUn 81.609 348 46 14 3107 3441 403841551 403841209 4.380000e-69 272.0
16 TraesCS2D01G076600 chrUn 80.403 347 51 11 3106 3441 38777527 38777187 7.370000e-62 248.0
17 TraesCS2D01G076600 chr1D 82.209 326 40 11 3107 3420 469547201 469546882 7.320000e-67 265.0
18 TraesCS2D01G076600 chr4B 80.802 349 49 14 3107 3441 667883224 667882880 1.230000e-64 257.0
19 TraesCS2D01G076600 chr4B 81.982 111 19 1 246 356 99264494 99264603 3.660000e-15 93.5
20 TraesCS2D01G076600 chr6D 88.265 196 22 1 1169 1363 358326184 358325989 2.060000e-57 233.0
21 TraesCS2D01G076600 chr6D 90.341 176 17 0 1178 1353 378379457 378379282 7.430000e-57 231.0
22 TraesCS2D01G076600 chr6D 92.593 81 5 1 2 81 147733906 147733986 7.800000e-22 115.0
23 TraesCS2D01G076600 chr6D 82.301 113 16 4 246 354 267726923 267726811 1.020000e-15 95.3
24 TraesCS2D01G076600 chr7D 85.153 229 30 3 1127 1352 174992544 174992771 7.430000e-57 231.0
25 TraesCS2D01G076600 chr7D 93.671 79 4 1 3 80 282738283 282738361 2.170000e-22 117.0
26 TraesCS2D01G076600 chr7D 81.739 115 18 3 246 357 619071343 619071457 3.660000e-15 93.5
27 TraesCS2D01G076600 chr6B 90.588 170 16 0 1194 1363 539727702 539727533 3.460000e-55 226.0
28 TraesCS2D01G076600 chr4D 82.192 219 34 5 6 221 298935655 298935871 2.110000e-42 183.0
29 TraesCS2D01G076600 chr4D 80.159 126 21 4 246 367 343063056 343063181 1.320000e-14 91.6
30 TraesCS2D01G076600 chr1B 81.223 229 38 5 16 241 310393008 310392782 2.730000e-41 180.0
31 TraesCS2D01G076600 chr1B 75.532 188 35 8 15 198 297329907 297330087 7.910000e-12 82.4
32 TraesCS2D01G076600 chr7B 79.186 221 44 2 14 232 706075316 706075096 5.950000e-33 152.0
33 TraesCS2D01G076600 chr7B 77.966 236 49 3 7 240 618543696 618543462 9.950000e-31 145.0
34 TraesCS2D01G076600 chr3A 92.683 82 5 1 6 86 386871622 386871703 2.170000e-22 117.0
35 TraesCS2D01G076600 chr3A 78.616 159 28 6 240 393 426867997 426867840 2.190000e-17 100.0
36 TraesCS2D01G076600 chr3B 82.171 129 20 2 268 394 75975115 75974988 1.310000e-19 108.0
37 TraesCS2D01G076600 chr3B 90.909 44 1 3 170 211 462886148 462886190 4.800000e-04 56.5
38 TraesCS2D01G076600 chr1A 84.375 96 14 1 1 95 220731442 220731537 3.660000e-15 93.5
39 TraesCS2D01G076600 chr4A 78.289 152 23 9 246 391 715328916 715329063 4.730000e-14 89.8
40 TraesCS2D01G076600 chr5D 78.417 139 25 5 246 379 357081543 357081405 6.120000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G076600 chr2D 32762076 32765516 3440 False 6355.0 6355 100.0000 1 3441 1 chr2D.!!$F1 3440
1 TraesCS2D01G076600 chr2B 54439691 54442863 3172 False 1735.0 3059 88.6655 566 3441 2 chr2B.!!$F1 2875
2 TraesCS2D01G076600 chr2A 35975359 35978465 3106 False 1732.5 2680 87.2540 604 3433 2 chr2A.!!$F1 2829

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
438 439 0.109735 GGACGCCTGTAAAGCAAAGC 60.110 55.0 0.0 0.0 0.0 3.51 F
439 440 0.109735 GACGCCTGTAAAGCAAAGCC 60.110 55.0 0.0 0.0 0.0 4.35 F
556 557 0.178990 GGTGCTCAAGGGTCCAAGTT 60.179 55.0 0.0 0.0 0.0 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1787 1865 2.106332 GCTGGCATGCCATTGCTC 59.894 61.111 38.47 20.65 46.15 4.26 R
1889 1967 3.369471 CGTAGGAGTTGTCCATGAACCAT 60.369 47.826 0.00 0.00 46.80 3.55 R
2472 2557 0.605589 GTGTGGGAAAGGAGAACCCG 60.606 60.000 0.00 0.00 45.91 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.636231 CCTGGGCGGTGACCTTCA 61.636 66.667 0.00 0.00 0.00 3.02
24 25 2.671070 CTGGGCGGTGACCTTCAT 59.329 61.111 0.00 0.00 0.00 2.57
25 26 1.746615 CTGGGCGGTGACCTTCATG 60.747 63.158 0.00 0.00 0.00 3.07
26 27 2.438434 GGGCGGTGACCTTCATGG 60.438 66.667 0.00 0.00 42.93 3.66
27 28 2.438434 GGCGGTGACCTTCATGGG 60.438 66.667 0.00 0.00 41.11 4.00
28 29 2.668632 GCGGTGACCTTCATGGGA 59.331 61.111 0.00 0.00 41.11 4.37
29 30 1.745489 GCGGTGACCTTCATGGGAC 60.745 63.158 0.00 0.00 41.11 4.46
30 31 1.078426 CGGTGACCTTCATGGGACC 60.078 63.158 0.00 0.00 41.11 4.46
31 32 1.303282 GGTGACCTTCATGGGACCC 59.697 63.158 2.45 2.45 41.11 4.46
32 33 1.497309 GGTGACCTTCATGGGACCCA 61.497 60.000 17.73 17.73 41.11 4.51
33 34 0.404040 GTGACCTTCATGGGACCCAA 59.596 55.000 19.58 0.00 41.11 4.12
34 35 0.698238 TGACCTTCATGGGACCCAAG 59.302 55.000 19.58 14.31 41.11 3.61
35 36 0.991920 GACCTTCATGGGACCCAAGA 59.008 55.000 19.58 16.87 41.11 3.02
36 37 0.995024 ACCTTCATGGGACCCAAGAG 59.005 55.000 19.58 14.92 41.11 2.85
37 38 0.257039 CCTTCATGGGACCCAAGAGG 59.743 60.000 19.58 18.93 36.95 3.69
38 39 0.394899 CTTCATGGGACCCAAGAGGC 60.395 60.000 19.58 0.00 40.58 4.70
39 40 2.124570 CATGGGACCCAAGAGGCG 60.125 66.667 19.58 0.00 40.58 5.52
40 41 3.411517 ATGGGACCCAAGAGGCGG 61.412 66.667 19.58 0.00 40.58 6.13
41 42 4.974438 TGGGACCCAAGAGGCGGT 62.974 66.667 12.05 0.00 40.58 5.68
42 43 4.410400 GGGACCCAAGAGGCGGTG 62.410 72.222 5.33 0.00 40.58 4.94
43 44 4.410400 GGACCCAAGAGGCGGTGG 62.410 72.222 0.00 0.00 40.58 4.61
54 55 4.740822 GCGGTGGCCTCCCATGTT 62.741 66.667 18.19 0.00 44.51 2.71
55 56 2.035626 CGGTGGCCTCCCATGTTT 59.964 61.111 18.19 0.00 44.51 2.83
56 57 1.301623 CGGTGGCCTCCCATGTTTA 59.698 57.895 18.19 0.00 44.51 2.01
57 58 1.029947 CGGTGGCCTCCCATGTTTAC 61.030 60.000 18.19 0.00 44.51 2.01
58 59 0.331616 GGTGGCCTCCCATGTTTACT 59.668 55.000 13.20 0.00 44.51 2.24
59 60 1.272480 GGTGGCCTCCCATGTTTACTT 60.272 52.381 13.20 0.00 44.51 2.24
60 61 2.092323 GTGGCCTCCCATGTTTACTTC 58.908 52.381 3.32 0.00 44.51 3.01
61 62 1.992557 TGGCCTCCCATGTTTACTTCT 59.007 47.619 3.32 0.00 35.79 2.85
62 63 2.026262 TGGCCTCCCATGTTTACTTCTC 60.026 50.000 3.32 0.00 35.79 2.87
63 64 2.644676 GCCTCCCATGTTTACTTCTCC 58.355 52.381 0.00 0.00 0.00 3.71
64 65 2.239907 GCCTCCCATGTTTACTTCTCCT 59.760 50.000 0.00 0.00 0.00 3.69
65 66 3.682999 GCCTCCCATGTTTACTTCTCCTC 60.683 52.174 0.00 0.00 0.00 3.71
66 67 3.430929 CCTCCCATGTTTACTTCTCCTCG 60.431 52.174 0.00 0.00 0.00 4.63
67 68 3.437213 TCCCATGTTTACTTCTCCTCGA 58.563 45.455 0.00 0.00 0.00 4.04
68 69 4.030913 TCCCATGTTTACTTCTCCTCGAT 58.969 43.478 0.00 0.00 0.00 3.59
69 70 4.122776 CCCATGTTTACTTCTCCTCGATG 58.877 47.826 0.00 0.00 0.00 3.84
70 71 4.141937 CCCATGTTTACTTCTCCTCGATGA 60.142 45.833 0.00 0.00 0.00 2.92
71 72 5.453903 CCCATGTTTACTTCTCCTCGATGAT 60.454 44.000 0.00 0.00 0.00 2.45
72 73 5.464722 CCATGTTTACTTCTCCTCGATGATG 59.535 44.000 0.00 0.00 0.00 3.07
73 74 5.011090 TGTTTACTTCTCCTCGATGATGG 57.989 43.478 0.00 0.00 0.00 3.51
74 75 3.735237 TTACTTCTCCTCGATGATGGC 57.265 47.619 0.00 0.00 0.00 4.40
75 76 0.387202 ACTTCTCCTCGATGATGGCG 59.613 55.000 0.00 0.00 0.00 5.69
76 77 0.319383 CTTCTCCTCGATGATGGCGG 60.319 60.000 0.00 0.00 0.00 6.13
77 78 2.356793 CTCCTCGATGATGGCGGC 60.357 66.667 0.00 0.00 0.00 6.53
78 79 4.284860 TCCTCGATGATGGCGGCG 62.285 66.667 0.51 0.51 0.00 6.46
82 83 4.293648 CGATGATGGCGGCGGGTA 62.294 66.667 9.78 0.00 0.00 3.69
83 84 2.665185 GATGATGGCGGCGGGTAC 60.665 66.667 9.78 0.00 0.00 3.34
84 85 4.602259 ATGATGGCGGCGGGTACG 62.602 66.667 9.78 0.00 44.63 3.67
104 105 2.821366 CGTGCTGGGTGATGCCTC 60.821 66.667 0.00 0.00 37.43 4.70
105 106 2.821366 GTGCTGGGTGATGCCTCG 60.821 66.667 0.00 0.00 37.43 4.63
106 107 3.321648 TGCTGGGTGATGCCTCGT 61.322 61.111 0.00 0.00 37.43 4.18
107 108 2.512515 GCTGGGTGATGCCTCGTC 60.513 66.667 0.00 0.00 37.43 4.20
108 109 2.981302 CTGGGTGATGCCTCGTCA 59.019 61.111 0.00 0.00 37.43 4.35
109 110 1.296392 CTGGGTGATGCCTCGTCAA 59.704 57.895 0.00 0.00 37.43 3.18
110 111 1.003839 TGGGTGATGCCTCGTCAAC 60.004 57.895 0.00 0.00 36.45 3.18
111 112 1.296715 GGGTGATGCCTCGTCAACT 59.703 57.895 4.35 0.00 37.27 3.16
112 113 0.741221 GGGTGATGCCTCGTCAACTC 60.741 60.000 4.35 0.00 37.27 3.01
113 114 0.741221 GGTGATGCCTCGTCAACTCC 60.741 60.000 0.00 0.00 34.57 3.85
114 115 1.078759 GTGATGCCTCGTCAACTCCG 61.079 60.000 0.00 0.00 30.77 4.63
115 116 2.125512 ATGCCTCGTCAACTCCGC 60.126 61.111 0.00 0.00 0.00 5.54
116 117 2.835701 GATGCCTCGTCAACTCCGCA 62.836 60.000 0.00 0.00 0.00 5.69
117 118 2.357034 GCCTCGTCAACTCCGCAA 60.357 61.111 0.00 0.00 0.00 4.85
118 119 1.959226 GCCTCGTCAACTCCGCAAA 60.959 57.895 0.00 0.00 0.00 3.68
119 120 1.901650 GCCTCGTCAACTCCGCAAAG 61.902 60.000 0.00 0.00 0.00 2.77
120 121 1.493311 CTCGTCAACTCCGCAAAGC 59.507 57.895 0.00 0.00 0.00 3.51
121 122 1.901650 CTCGTCAACTCCGCAAAGCC 61.902 60.000 0.00 0.00 0.00 4.35
122 123 2.954611 GTCAACTCCGCAAAGCCC 59.045 61.111 0.00 0.00 0.00 5.19
123 124 2.668212 TCAACTCCGCAAAGCCCG 60.668 61.111 0.00 0.00 0.00 6.13
124 125 4.404654 CAACTCCGCAAAGCCCGC 62.405 66.667 0.00 0.00 0.00 6.13
125 126 4.643387 AACTCCGCAAAGCCCGCT 62.643 61.111 0.00 0.00 0.00 5.52
153 154 3.419759 CCGGCAGCGTGTGGTTAC 61.420 66.667 0.00 0.00 0.00 2.50
154 155 3.773630 CGGCAGCGTGTGGTTACG 61.774 66.667 0.00 0.00 46.28 3.18
172 173 2.202440 CGAACGTCGACTGCGGAT 60.202 61.111 14.70 0.00 43.74 4.18
173 174 2.497092 CGAACGTCGACTGCGGATG 61.497 63.158 14.70 0.00 43.74 3.51
174 175 2.126071 AACGTCGACTGCGGATGG 60.126 61.111 14.70 0.00 38.28 3.51
175 176 4.796231 ACGTCGACTGCGGATGGC 62.796 66.667 14.70 0.00 43.96 4.40
194 195 4.742201 CGGTCACAGGCACGGGAG 62.742 72.222 0.00 0.00 0.00 4.30
195 196 4.394712 GGTCACAGGCACGGGAGG 62.395 72.222 0.00 0.00 0.00 4.30
196 197 3.311110 GTCACAGGCACGGGAGGA 61.311 66.667 0.00 0.00 0.00 3.71
197 198 2.997315 TCACAGGCACGGGAGGAG 60.997 66.667 0.00 0.00 0.00 3.69
198 199 4.767255 CACAGGCACGGGAGGAGC 62.767 72.222 0.00 0.00 0.00 4.70
203 204 4.509737 GCACGGGAGGAGCGGTAC 62.510 72.222 0.00 0.00 0.00 3.34
228 229 4.953868 CGTCGTCCACGGCAACCA 62.954 66.667 4.37 0.00 45.47 3.67
229 230 3.343421 GTCGTCCACGGCAACCAC 61.343 66.667 0.00 0.00 44.43 4.16
230 231 4.953868 TCGTCCACGGCAACCACG 62.954 66.667 0.00 0.00 40.29 4.94
231 232 4.953868 CGTCCACGGCAACCACGA 62.954 66.667 0.00 0.00 35.37 4.35
232 233 2.358247 GTCCACGGCAACCACGAT 60.358 61.111 0.00 0.00 34.93 3.73
233 234 2.358125 TCCACGGCAACCACGATG 60.358 61.111 0.00 0.00 34.93 3.84
234 235 4.101790 CCACGGCAACCACGATGC 62.102 66.667 0.00 0.00 43.08 3.91
269 270 3.423154 GCTTCAACGCCGGGAGTG 61.423 66.667 3.56 0.00 0.00 3.51
270 271 2.342279 CTTCAACGCCGGGAGTGA 59.658 61.111 3.56 1.68 0.00 3.41
271 272 1.738099 CTTCAACGCCGGGAGTGAG 60.738 63.158 3.56 0.54 0.00 3.51
272 273 2.154798 CTTCAACGCCGGGAGTGAGA 62.155 60.000 3.56 3.16 0.00 3.27
273 274 2.125912 CAACGCCGGGAGTGAGAG 60.126 66.667 3.56 0.00 0.00 3.20
274 275 3.382832 AACGCCGGGAGTGAGAGG 61.383 66.667 3.56 0.00 0.00 3.69
275 276 4.680537 ACGCCGGGAGTGAGAGGT 62.681 66.667 2.18 0.00 0.00 3.85
276 277 3.827898 CGCCGGGAGTGAGAGGTC 61.828 72.222 2.18 0.00 0.00 3.85
277 278 3.827898 GCCGGGAGTGAGAGGTCG 61.828 72.222 2.18 0.00 0.00 4.79
278 279 3.827898 CCGGGAGTGAGAGGTCGC 61.828 72.222 0.00 0.00 0.00 5.19
279 280 3.062466 CGGGAGTGAGAGGTCGCA 61.062 66.667 0.00 0.00 35.46 5.10
280 281 2.418910 CGGGAGTGAGAGGTCGCAT 61.419 63.158 0.00 0.00 35.46 4.73
281 282 1.439644 GGGAGTGAGAGGTCGCATC 59.560 63.158 0.00 0.00 35.46 3.91
282 283 1.439644 GGAGTGAGAGGTCGCATCC 59.560 63.158 0.00 0.00 35.46 3.51
283 284 1.064946 GAGTGAGAGGTCGCATCCG 59.935 63.158 0.00 0.00 35.46 4.18
284 285 1.658686 GAGTGAGAGGTCGCATCCGT 61.659 60.000 0.00 0.00 35.46 4.69
285 286 1.215647 GTGAGAGGTCGCATCCGTT 59.784 57.895 0.00 0.00 35.54 4.44
286 287 0.802607 GTGAGAGGTCGCATCCGTTC 60.803 60.000 0.00 0.00 35.54 3.95
287 288 0.965866 TGAGAGGTCGCATCCGTTCT 60.966 55.000 0.00 0.00 35.54 3.01
288 289 1.022735 GAGAGGTCGCATCCGTTCTA 58.977 55.000 0.00 0.00 35.54 2.10
289 290 0.739561 AGAGGTCGCATCCGTTCTAC 59.260 55.000 0.00 0.00 35.54 2.59
290 291 0.591741 GAGGTCGCATCCGTTCTACG 60.592 60.000 0.00 0.00 42.11 3.51
291 292 2.228914 GGTCGCATCCGTTCTACGC 61.229 63.158 0.00 0.00 40.91 4.42
292 293 2.103538 TCGCATCCGTTCTACGCC 59.896 61.111 0.00 0.00 40.91 5.68
293 294 3.320078 CGCATCCGTTCTACGCCG 61.320 66.667 0.00 0.00 40.91 6.46
294 295 2.960129 GCATCCGTTCTACGCCGG 60.960 66.667 0.00 0.00 45.55 6.13
295 296 2.493030 CATCCGTTCTACGCCGGT 59.507 61.111 1.90 0.00 44.51 5.28
296 297 1.876714 CATCCGTTCTACGCCGGTG 60.877 63.158 14.93 14.93 44.51 4.94
297 298 2.345760 ATCCGTTCTACGCCGGTGT 61.346 57.895 26.18 26.18 44.51 4.16
298 299 2.552585 ATCCGTTCTACGCCGGTGTG 62.553 60.000 30.54 19.25 44.51 3.82
299 300 2.256158 CGTTCTACGCCGGTGTGA 59.744 61.111 30.54 21.14 33.65 3.58
300 301 1.372004 CGTTCTACGCCGGTGTGAA 60.372 57.895 30.54 25.06 33.65 3.18
301 302 0.734942 CGTTCTACGCCGGTGTGAAT 60.735 55.000 30.54 5.94 33.65 2.57
302 303 0.719465 GTTCTACGCCGGTGTGAATG 59.281 55.000 30.54 16.65 0.00 2.67
303 304 1.017177 TTCTACGCCGGTGTGAATGC 61.017 55.000 30.54 0.00 0.00 3.56
307 308 3.499737 GCCGGTGTGAATGCGGAG 61.500 66.667 1.90 0.00 0.00 4.63
321 322 2.263540 GGAGCGGCCGTTCTACAA 59.736 61.111 35.83 0.00 0.00 2.41
322 323 2.098831 GGAGCGGCCGTTCTACAAC 61.099 63.158 35.83 18.88 0.00 3.32
360 361 2.509786 GCGCCGGACGGAAACATA 60.510 61.111 15.99 0.00 43.93 2.29
361 362 2.805807 GCGCCGGACGGAAACATAC 61.806 63.158 15.99 0.00 43.93 2.39
362 363 2.510594 CGCCGGACGGAAACATACG 61.511 63.158 15.99 2.54 38.44 3.06
363 364 2.805807 GCCGGACGGAAACATACGC 61.806 63.158 15.99 0.00 37.50 4.42
364 365 2.510594 CCGGACGGAAACATACGCG 61.511 63.158 3.53 3.53 37.50 6.01
365 366 2.510594 CGGACGGAAACATACGCGG 61.511 63.158 12.47 0.00 0.00 6.46
366 367 2.169146 GGACGGAAACATACGCGGG 61.169 63.158 12.47 1.38 0.00 6.13
367 368 2.805807 GACGGAAACATACGCGGGC 61.806 63.158 12.47 0.00 0.00 6.13
368 369 3.920553 CGGAAACATACGCGGGCG 61.921 66.667 12.47 12.04 46.03 6.13
369 370 4.232248 GGAAACATACGCGGGCGC 62.232 66.667 12.47 0.00 44.19 6.53
383 384 4.807631 GCGCGGGTGGGGGTTAAT 62.808 66.667 8.83 0.00 0.00 1.40
384 385 2.826738 CGCGGGTGGGGGTTAATG 60.827 66.667 0.00 0.00 0.00 1.90
385 386 2.441348 GCGGGTGGGGGTTAATGG 60.441 66.667 0.00 0.00 0.00 3.16
386 387 3.092624 CGGGTGGGGGTTAATGGT 58.907 61.111 0.00 0.00 0.00 3.55
387 388 1.379309 CGGGTGGGGGTTAATGGTG 60.379 63.158 0.00 0.00 0.00 4.17
388 389 1.001120 GGGTGGGGGTTAATGGTGG 59.999 63.158 0.00 0.00 0.00 4.61
389 390 1.001120 GGTGGGGGTTAATGGTGGG 59.999 63.158 0.00 0.00 0.00 4.61
390 391 1.684391 GTGGGGGTTAATGGTGGGC 60.684 63.158 0.00 0.00 0.00 5.36
391 392 2.042333 GGGGGTTAATGGTGGGCC 60.042 66.667 0.00 0.00 0.00 5.80
400 401 2.836154 TGGTGGGCCAGTCAGAAC 59.164 61.111 6.40 0.00 40.46 3.01
401 402 2.034221 GGTGGGCCAGTCAGAACC 59.966 66.667 6.40 0.00 34.09 3.62
402 403 2.358737 GTGGGCCAGTCAGAACCG 60.359 66.667 6.40 0.00 0.00 4.44
403 404 3.636231 TGGGCCAGTCAGAACCGG 61.636 66.667 0.00 0.00 0.00 5.28
404 405 3.319198 GGGCCAGTCAGAACCGGA 61.319 66.667 9.46 0.00 0.00 5.14
405 406 2.670148 GGGCCAGTCAGAACCGGAT 61.670 63.158 9.46 0.00 0.00 4.18
406 407 1.450312 GGCCAGTCAGAACCGGATG 60.450 63.158 9.46 3.77 0.00 3.51
407 408 1.296715 GCCAGTCAGAACCGGATGT 59.703 57.895 9.46 0.00 0.00 3.06
408 409 1.021390 GCCAGTCAGAACCGGATGTG 61.021 60.000 9.46 5.15 0.00 3.21
409 410 0.608130 CCAGTCAGAACCGGATGTGA 59.392 55.000 9.46 8.32 0.00 3.58
410 411 1.404717 CCAGTCAGAACCGGATGTGAG 60.405 57.143 12.07 1.66 0.00 3.51
411 412 1.546029 CAGTCAGAACCGGATGTGAGA 59.454 52.381 12.07 0.00 0.00 3.27
412 413 1.821753 AGTCAGAACCGGATGTGAGAG 59.178 52.381 12.07 0.00 0.00 3.20
413 414 1.546476 GTCAGAACCGGATGTGAGAGT 59.454 52.381 12.07 0.00 0.00 3.24
414 415 1.546029 TCAGAACCGGATGTGAGAGTG 59.454 52.381 9.46 0.00 0.00 3.51
415 416 0.898320 AGAACCGGATGTGAGAGTGG 59.102 55.000 9.46 0.00 0.00 4.00
416 417 0.608640 GAACCGGATGTGAGAGTGGT 59.391 55.000 9.46 0.00 0.00 4.16
417 418 1.002087 GAACCGGATGTGAGAGTGGTT 59.998 52.381 9.46 0.00 42.08 3.67
418 419 0.608640 ACCGGATGTGAGAGTGGTTC 59.391 55.000 9.46 0.00 0.00 3.62
419 420 0.458543 CCGGATGTGAGAGTGGTTCG 60.459 60.000 0.00 0.00 0.00 3.95
420 421 0.458543 CGGATGTGAGAGTGGTTCGG 60.459 60.000 0.00 0.00 0.00 4.30
421 422 0.895530 GGATGTGAGAGTGGTTCGGA 59.104 55.000 0.00 0.00 0.00 4.55
422 423 1.404315 GGATGTGAGAGTGGTTCGGAC 60.404 57.143 0.00 0.00 0.00 4.79
423 424 0.243907 ATGTGAGAGTGGTTCGGACG 59.756 55.000 0.00 0.00 0.00 4.79
424 425 1.733399 GTGAGAGTGGTTCGGACGC 60.733 63.158 0.00 0.00 0.00 5.19
425 426 2.126031 GAGAGTGGTTCGGACGCC 60.126 66.667 0.00 0.00 0.00 5.68
426 427 2.600769 AGAGTGGTTCGGACGCCT 60.601 61.111 0.00 0.00 0.00 5.52
427 428 2.432628 GAGTGGTTCGGACGCCTG 60.433 66.667 0.00 0.00 0.00 4.85
428 429 3.222354 GAGTGGTTCGGACGCCTGT 62.222 63.158 0.00 0.00 0.00 4.00
429 430 1.870055 GAGTGGTTCGGACGCCTGTA 61.870 60.000 0.00 0.00 0.00 2.74
430 431 1.005867 GTGGTTCGGACGCCTGTAA 60.006 57.895 0.00 0.00 0.00 2.41
431 432 0.600782 GTGGTTCGGACGCCTGTAAA 60.601 55.000 0.00 0.00 0.00 2.01
432 433 0.320073 TGGTTCGGACGCCTGTAAAG 60.320 55.000 0.00 0.00 0.00 1.85
433 434 1.632948 GGTTCGGACGCCTGTAAAGC 61.633 60.000 0.00 0.00 0.00 3.51
434 435 0.947180 GTTCGGACGCCTGTAAAGCA 60.947 55.000 0.00 0.00 0.00 3.91
435 436 0.249953 TTCGGACGCCTGTAAAGCAA 60.250 50.000 0.00 0.00 0.00 3.91
436 437 0.249953 TCGGACGCCTGTAAAGCAAA 60.250 50.000 0.00 0.00 0.00 3.68
437 438 0.165944 CGGACGCCTGTAAAGCAAAG 59.834 55.000 0.00 0.00 0.00 2.77
438 439 0.109735 GGACGCCTGTAAAGCAAAGC 60.110 55.000 0.00 0.00 0.00 3.51
439 440 0.109735 GACGCCTGTAAAGCAAAGCC 60.110 55.000 0.00 0.00 0.00 4.35
440 441 1.212751 CGCCTGTAAAGCAAAGCCC 59.787 57.895 0.00 0.00 0.00 5.19
441 442 1.244019 CGCCTGTAAAGCAAAGCCCT 61.244 55.000 0.00 0.00 0.00 5.19
442 443 0.528017 GCCTGTAAAGCAAAGCCCTC 59.472 55.000 0.00 0.00 0.00 4.30
443 444 1.177401 CCTGTAAAGCAAAGCCCTCC 58.823 55.000 0.00 0.00 0.00 4.30
444 445 1.272147 CCTGTAAAGCAAAGCCCTCCT 60.272 52.381 0.00 0.00 0.00 3.69
445 446 2.026262 CCTGTAAAGCAAAGCCCTCCTA 60.026 50.000 0.00 0.00 0.00 2.94
446 447 3.274288 CTGTAAAGCAAAGCCCTCCTAG 58.726 50.000 0.00 0.00 0.00 3.02
447 448 2.642807 TGTAAAGCAAAGCCCTCCTAGT 59.357 45.455 0.00 0.00 0.00 2.57
448 449 2.980246 AAAGCAAAGCCCTCCTAGTT 57.020 45.000 0.00 0.00 0.00 2.24
449 450 2.980246 AAGCAAAGCCCTCCTAGTTT 57.020 45.000 0.00 0.00 0.00 2.66
450 451 4.382386 AAAGCAAAGCCCTCCTAGTTTA 57.618 40.909 0.00 0.00 0.00 2.01
451 452 4.592997 AAGCAAAGCCCTCCTAGTTTAT 57.407 40.909 0.00 0.00 0.00 1.40
452 453 4.592997 AGCAAAGCCCTCCTAGTTTATT 57.407 40.909 0.00 0.00 0.00 1.40
453 454 4.527944 AGCAAAGCCCTCCTAGTTTATTC 58.472 43.478 0.00 0.00 0.00 1.75
454 455 3.632604 GCAAAGCCCTCCTAGTTTATTCC 59.367 47.826 0.00 0.00 0.00 3.01
455 456 3.840124 AAGCCCTCCTAGTTTATTCCG 57.160 47.619 0.00 0.00 0.00 4.30
456 457 2.047830 AGCCCTCCTAGTTTATTCCGG 58.952 52.381 0.00 0.00 0.00 5.14
457 458 1.767088 GCCCTCCTAGTTTATTCCGGT 59.233 52.381 0.00 0.00 0.00 5.28
458 459 2.172082 GCCCTCCTAGTTTATTCCGGTT 59.828 50.000 0.00 0.00 0.00 4.44
459 460 3.371273 GCCCTCCTAGTTTATTCCGGTTT 60.371 47.826 0.00 0.00 0.00 3.27
460 461 4.196971 CCCTCCTAGTTTATTCCGGTTTG 58.803 47.826 0.00 0.00 0.00 2.93
461 462 3.626217 CCTCCTAGTTTATTCCGGTTTGC 59.374 47.826 0.00 0.00 0.00 3.68
462 463 3.264104 TCCTAGTTTATTCCGGTTTGCG 58.736 45.455 0.00 0.00 0.00 4.85
463 464 2.353579 CCTAGTTTATTCCGGTTTGCGG 59.646 50.000 0.00 0.00 0.00 5.69
464 465 2.188062 AGTTTATTCCGGTTTGCGGA 57.812 45.000 0.00 0.00 0.00 5.54
466 467 2.885894 AGTTTATTCCGGTTTGCGGAAA 59.114 40.909 1.04 0.00 46.73 3.13
467 468 3.057806 AGTTTATTCCGGTTTGCGGAAAG 60.058 43.478 0.93 0.00 46.73 2.62
468 469 2.476126 TATTCCGGTTTGCGGAAAGA 57.524 45.000 0.93 0.00 46.73 2.52
469 470 1.611519 ATTCCGGTTTGCGGAAAGAA 58.388 45.000 0.93 3.64 46.73 2.52
470 471 1.390565 TTCCGGTTTGCGGAAAGAAA 58.609 45.000 0.93 0.00 41.84 2.52
471 472 1.390565 TCCGGTTTGCGGAAAGAAAA 58.609 45.000 0.93 0.00 31.94 2.29
472 473 1.749634 TCCGGTTTGCGGAAAGAAAAA 59.250 42.857 0.93 0.00 31.94 1.94
473 474 2.362717 TCCGGTTTGCGGAAAGAAAAAT 59.637 40.909 0.93 0.00 31.94 1.82
474 475 3.127589 CCGGTTTGCGGAAAGAAAAATT 58.872 40.909 0.93 0.00 0.00 1.82
475 476 3.183574 CCGGTTTGCGGAAAGAAAAATTC 59.816 43.478 0.93 0.00 0.00 2.17
476 477 3.799420 CGGTTTGCGGAAAGAAAAATTCA 59.201 39.130 0.93 0.00 0.00 2.57
477 478 4.085107 CGGTTTGCGGAAAGAAAAATTCAG 60.085 41.667 0.93 0.00 0.00 3.02
478 479 5.047188 GGTTTGCGGAAAGAAAAATTCAGA 58.953 37.500 0.93 0.00 0.00 3.27
479 480 5.051039 GGTTTGCGGAAAGAAAAATTCAGAC 60.051 40.000 0.93 0.00 0.00 3.51
480 481 4.237349 TGCGGAAAGAAAAATTCAGACC 57.763 40.909 0.00 0.00 0.00 3.85
481 482 3.234386 GCGGAAAGAAAAATTCAGACCG 58.766 45.455 0.00 0.00 40.59 4.79
482 483 3.234386 CGGAAAGAAAAATTCAGACCGC 58.766 45.455 0.00 0.00 35.38 5.68
483 484 3.575630 GGAAAGAAAAATTCAGACCGCC 58.424 45.455 0.00 0.00 0.00 6.13
484 485 3.005367 GGAAAGAAAAATTCAGACCGCCA 59.995 43.478 0.00 0.00 0.00 5.69
485 486 4.500716 GGAAAGAAAAATTCAGACCGCCAA 60.501 41.667 0.00 0.00 0.00 4.52
486 487 4.871933 AAGAAAAATTCAGACCGCCAAT 57.128 36.364 0.00 0.00 0.00 3.16
487 488 4.440839 AGAAAAATTCAGACCGCCAATC 57.559 40.909 0.00 0.00 0.00 2.67
488 489 3.826157 AGAAAAATTCAGACCGCCAATCA 59.174 39.130 0.00 0.00 0.00 2.57
489 490 4.280677 AGAAAAATTCAGACCGCCAATCAA 59.719 37.500 0.00 0.00 0.00 2.57
490 491 4.599047 AAAATTCAGACCGCCAATCAAA 57.401 36.364 0.00 0.00 0.00 2.69
491 492 4.806640 AAATTCAGACCGCCAATCAAAT 57.193 36.364 0.00 0.00 0.00 2.32
492 493 4.376340 AATTCAGACCGCCAATCAAATC 57.624 40.909 0.00 0.00 0.00 2.17
493 494 1.368641 TCAGACCGCCAATCAAATCG 58.631 50.000 0.00 0.00 0.00 3.34
494 495 1.066502 TCAGACCGCCAATCAAATCGA 60.067 47.619 0.00 0.00 0.00 3.59
495 496 1.942657 CAGACCGCCAATCAAATCGAT 59.057 47.619 0.00 0.00 35.12 3.59
496 497 3.130633 CAGACCGCCAATCAAATCGATA 58.869 45.455 0.00 0.00 32.51 2.92
497 498 3.059597 CAGACCGCCAATCAAATCGATAC 60.060 47.826 0.00 0.00 32.51 2.24
498 499 2.869801 GACCGCCAATCAAATCGATACA 59.130 45.455 0.00 0.00 32.51 2.29
499 500 2.872245 ACCGCCAATCAAATCGATACAG 59.128 45.455 0.00 0.00 32.51 2.74
500 501 3.130633 CCGCCAATCAAATCGATACAGA 58.869 45.455 0.00 0.00 32.51 3.41
501 502 3.748048 CCGCCAATCAAATCGATACAGAT 59.252 43.478 0.00 0.00 32.51 2.90
502 503 4.143030 CCGCCAATCAAATCGATACAGATC 60.143 45.833 0.00 0.00 32.51 2.75
503 504 4.143030 CGCCAATCAAATCGATACAGATCC 60.143 45.833 0.00 0.00 32.51 3.36
504 505 4.143030 GCCAATCAAATCGATACAGATCCG 60.143 45.833 0.00 0.00 32.51 4.18
505 506 4.143030 CCAATCAAATCGATACAGATCCGC 60.143 45.833 0.00 0.00 32.51 5.54
506 507 2.661594 TCAAATCGATACAGATCCGCG 58.338 47.619 0.00 0.00 0.00 6.46
507 508 2.034179 TCAAATCGATACAGATCCGCGT 59.966 45.455 4.92 0.00 0.00 6.01
508 509 2.794910 CAAATCGATACAGATCCGCGTT 59.205 45.455 4.92 0.00 0.00 4.84
509 510 2.051879 ATCGATACAGATCCGCGTTG 57.948 50.000 4.92 0.09 0.00 4.10
510 511 1.018910 TCGATACAGATCCGCGTTGA 58.981 50.000 4.92 0.00 0.00 3.18
511 512 1.402613 TCGATACAGATCCGCGTTGAA 59.597 47.619 4.92 0.00 0.00 2.69
512 513 2.034179 TCGATACAGATCCGCGTTGAAT 59.966 45.455 4.92 0.00 0.00 2.57
513 514 2.153817 CGATACAGATCCGCGTTGAATG 59.846 50.000 4.92 2.57 0.00 2.67
514 515 1.934589 TACAGATCCGCGTTGAATGG 58.065 50.000 4.92 0.00 0.00 3.16
515 516 1.353103 CAGATCCGCGTTGAATGGC 59.647 57.895 4.92 0.00 0.00 4.40
516 517 1.078497 AGATCCGCGTTGAATGGCA 60.078 52.632 4.92 0.00 0.00 4.92
517 518 1.062525 GATCCGCGTTGAATGGCAC 59.937 57.895 4.92 0.00 0.00 5.01
518 519 2.631696 GATCCGCGTTGAATGGCACG 62.632 60.000 4.92 0.00 0.00 5.34
519 520 3.418913 CCGCGTTGAATGGCACGA 61.419 61.111 4.92 0.00 0.00 4.35
520 521 2.202171 CGCGTTGAATGGCACGAC 60.202 61.111 0.00 0.00 0.00 4.34
521 522 2.942879 GCGTTGAATGGCACGACA 59.057 55.556 0.00 0.00 0.00 4.35
522 523 1.440353 GCGTTGAATGGCACGACAC 60.440 57.895 0.00 0.00 0.00 3.67
523 524 1.154672 CGTTGAATGGCACGACACG 60.155 57.895 0.00 0.00 0.00 4.49
524 525 1.440353 GTTGAATGGCACGACACGC 60.440 57.895 0.00 0.00 0.00 5.34
542 543 4.988598 CTCGTGGTTGCGGGTGCT 62.989 66.667 0.00 0.00 43.34 4.40
543 544 4.980805 TCGTGGTTGCGGGTGCTC 62.981 66.667 0.00 0.00 43.34 4.26
545 546 2.904866 GTGGTTGCGGGTGCTCAA 60.905 61.111 0.00 0.00 43.34 3.02
546 547 2.594303 TGGTTGCGGGTGCTCAAG 60.594 61.111 0.00 0.00 43.34 3.02
547 548 3.365265 GGTTGCGGGTGCTCAAGG 61.365 66.667 0.00 0.00 43.34 3.61
548 549 3.365265 GTTGCGGGTGCTCAAGGG 61.365 66.667 0.00 0.00 43.34 3.95
549 550 3.884774 TTGCGGGTGCTCAAGGGT 61.885 61.111 0.00 0.00 43.34 4.34
550 551 3.842925 TTGCGGGTGCTCAAGGGTC 62.843 63.158 0.00 0.00 43.34 4.46
552 553 3.636231 CGGGTGCTCAAGGGTCCA 61.636 66.667 0.00 0.00 0.00 4.02
553 554 2.843545 GGGTGCTCAAGGGTCCAA 59.156 61.111 0.00 0.00 0.00 3.53
554 555 1.303643 GGGTGCTCAAGGGTCCAAG 60.304 63.158 0.00 0.00 0.00 3.61
555 556 1.456287 GGTGCTCAAGGGTCCAAGT 59.544 57.895 0.00 0.00 0.00 3.16
556 557 0.178990 GGTGCTCAAGGGTCCAAGTT 60.179 55.000 0.00 0.00 0.00 2.66
557 558 0.954452 GTGCTCAAGGGTCCAAGTTG 59.046 55.000 0.00 0.00 0.00 3.16
558 559 0.550914 TGCTCAAGGGTCCAAGTTGT 59.449 50.000 1.45 0.00 0.00 3.32
559 560 1.064017 TGCTCAAGGGTCCAAGTTGTT 60.064 47.619 1.45 0.00 0.00 2.83
560 561 1.338020 GCTCAAGGGTCCAAGTTGTTG 59.662 52.381 1.45 0.00 0.00 3.33
575 576 0.618458 TGTTGGAGATGGCCTGGTAC 59.382 55.000 3.32 0.00 0.00 3.34
602 603 3.058160 CTGGCCGGCAAAGAGGTG 61.058 66.667 30.85 0.00 0.00 4.00
613 614 1.475280 CAAAGAGGTGTGGATGCATGG 59.525 52.381 2.46 0.00 0.00 3.66
1041 1077 1.602237 CCAATCCACAGCCGTACCT 59.398 57.895 0.00 0.00 0.00 3.08
1083 1155 1.005340 CTCTCGCTTCCTACGTACGT 58.995 55.000 25.98 25.98 0.00 3.57
1374 1449 4.851214 GCTCCGGCTCCTCCTCCT 62.851 72.222 0.00 0.00 35.22 3.69
1433 1508 4.767255 GCCGACCAGGACCAGCAG 62.767 72.222 0.00 0.00 45.00 4.24
1434 1509 4.767255 CCGACCAGGACCAGCAGC 62.767 72.222 0.00 0.00 45.00 5.25
1435 1510 4.007644 CGACCAGGACCAGCAGCA 62.008 66.667 0.00 0.00 0.00 4.41
1914 1992 0.108804 CATGGACAACTCCTACGCGT 60.109 55.000 19.17 19.17 37.48 6.01
2314 2398 9.887406 TCATGTAATTTTCTTTACCGTTTCTTC 57.113 29.630 0.00 0.00 32.24 2.87
2315 2399 8.837059 CATGTAATTTTCTTTACCGTTTCTTCG 58.163 33.333 0.00 0.00 32.24 3.79
2401 2485 2.396590 TAAATGACTTGGGAGCGACC 57.603 50.000 0.00 0.00 38.08 4.79
2404 2488 0.179000 ATGACTTGGGAGCGACCATC 59.821 55.000 3.19 0.57 40.91 3.51
2484 2569 2.025636 TCCTCTTCGGGTTCTCCTTT 57.974 50.000 0.00 0.00 0.00 3.11
2493 2578 1.982958 GGGTTCTCCTTTCCCACACTA 59.017 52.381 0.00 0.00 40.79 2.74
2494 2579 2.290134 GGGTTCTCCTTTCCCACACTAC 60.290 54.545 0.00 0.00 40.79 2.73
2495 2580 2.638363 GGTTCTCCTTTCCCACACTACT 59.362 50.000 0.00 0.00 0.00 2.57
2545 2630 3.512516 GCAGGCGGCACTTCCATC 61.513 66.667 13.08 0.00 43.97 3.51
2546 2631 2.046023 CAGGCGGCACTTCCATCA 60.046 61.111 13.08 0.00 34.01 3.07
2575 2660 3.330720 CCACCCTTCCCTCGCCTT 61.331 66.667 0.00 0.00 0.00 4.35
2604 2892 2.509422 GCCATCCGTCTAACCCCC 59.491 66.667 0.00 0.00 0.00 5.40
2605 2893 2.819550 CCATCCGTCTAACCCCCG 59.180 66.667 0.00 0.00 0.00 5.73
2606 2894 2.108362 CATCCGTCTAACCCCCGC 59.892 66.667 0.00 0.00 0.00 6.13
2608 2896 2.132352 ATCCGTCTAACCCCCGCTC 61.132 63.158 0.00 0.00 0.00 5.03
2609 2897 3.846430 CCGTCTAACCCCCGCTCC 61.846 72.222 0.00 0.00 0.00 4.70
2610 2898 3.846430 CGTCTAACCCCCGCTCCC 61.846 72.222 0.00 0.00 0.00 4.30
2611 2899 3.477346 GTCTAACCCCCGCTCCCC 61.477 72.222 0.00 0.00 0.00 4.81
2612 2900 4.810184 TCTAACCCCCGCTCCCCC 62.810 72.222 0.00 0.00 0.00 5.40
2613 2901 4.817909 CTAACCCCCGCTCCCCCT 62.818 72.222 0.00 0.00 0.00 4.79
2614 2902 4.810184 TAACCCCCGCTCCCCCTC 62.810 72.222 0.00 0.00 0.00 4.30
2639 2938 3.826822 CCCACACCCCACACCCAA 61.827 66.667 0.00 0.00 0.00 4.12
2640 2939 2.280416 CCACACCCCACACCCAAA 59.720 61.111 0.00 0.00 0.00 3.28
2641 2940 2.131067 CCACACCCCACACCCAAAC 61.131 63.158 0.00 0.00 0.00 2.93
2642 2941 1.380515 CACACCCCACACCCAAACA 60.381 57.895 0.00 0.00 0.00 2.83
2643 2942 1.380650 ACACCCCACACCCAAACAC 60.381 57.895 0.00 0.00 0.00 3.32
2644 2943 1.380515 CACCCCACACCCAAACACA 60.381 57.895 0.00 0.00 0.00 3.72
2645 2944 1.380650 ACCCCACACCCAAACACAC 60.381 57.895 0.00 0.00 0.00 3.82
2675 2974 2.738213 CTTCTCCAACACCGGCAGCT 62.738 60.000 0.00 0.00 0.00 4.24
2689 2988 4.715130 AGCTCCACCCCGCACCTA 62.715 66.667 0.00 0.00 0.00 3.08
2691 2990 2.584608 CTCCACCCCGCACCTAAG 59.415 66.667 0.00 0.00 0.00 2.18
2693 2992 0.974010 CTCCACCCCGCACCTAAGTA 60.974 60.000 0.00 0.00 0.00 2.24
2698 2997 1.910671 ACCCCGCACCTAAGTATCAAA 59.089 47.619 0.00 0.00 0.00 2.69
2702 3001 4.058817 CCCGCACCTAAGTATCAAATCTC 58.941 47.826 0.00 0.00 0.00 2.75
2707 3006 5.290386 CACCTAAGTATCAAATCTCCGACC 58.710 45.833 0.00 0.00 0.00 4.79
2714 3013 0.905357 CAAATCTCCGACCCACCTCT 59.095 55.000 0.00 0.00 0.00 3.69
2745 3044 2.434884 CGGCGAGCCATGTCACTT 60.435 61.111 15.03 0.00 35.37 3.16
2775 3074 2.582436 GTTCCCGAATCGGCCTCA 59.418 61.111 17.50 0.00 46.86 3.86
2777 3076 2.287274 TTCCCGAATCGGCCTCACA 61.287 57.895 17.50 0.00 46.86 3.58
2797 3096 3.124921 CGGCCCCGTGTAAAGCAG 61.125 66.667 0.00 0.00 34.35 4.24
2805 3104 1.599797 GTGTAAAGCAGCCACCCGT 60.600 57.895 0.00 0.00 0.00 5.28
2877 3184 6.898041 TCTCACAAGAAATTGAATTACACGG 58.102 36.000 0.00 0.00 0.00 4.94
2893 3200 9.490663 GAATTACACGGAAATTCAGATAACTTG 57.509 33.333 0.00 0.00 41.13 3.16
2904 3211 5.973651 TCAGATAACTTGCAAATAGCTCG 57.026 39.130 0.00 1.50 45.94 5.03
2907 3214 2.619013 AACTTGCAAATAGCTCGTGC 57.381 45.000 0.00 0.07 45.94 5.34
2910 3217 0.721154 TTGCAAATAGCTCGTGCGAG 59.279 50.000 16.29 16.29 45.94 5.03
3009 3636 6.659668 TGAGTTACATGTAAGCTAGACAGACT 59.340 38.462 18.56 8.69 0.00 3.24
3014 3641 5.068460 ACATGTAAGCTAGACAGACTGATCC 59.932 44.000 10.08 0.00 0.00 3.36
3021 3648 4.340666 GCTAGACAGACTGATCCATGAGAA 59.659 45.833 10.08 0.00 0.00 2.87
3034 3661 2.686915 CCATGAGAAATGGGCTCAAGTC 59.313 50.000 0.00 0.00 44.71 3.01
3035 3662 3.349927 CATGAGAAATGGGCTCAAGTCA 58.650 45.455 0.00 0.00 44.71 3.41
3040 3667 3.760684 AGAAATGGGCTCAAGTCATTGAC 59.239 43.478 8.82 8.82 40.54 3.18
3074 3701 9.561069 ACCATCTTTATCATACAAGATTGGTAC 57.439 33.333 11.25 0.00 37.60 3.34
3075 3702 9.784531 CCATCTTTATCATACAAGATTGGTACT 57.215 33.333 0.00 0.00 37.60 2.73
3082 3709 7.905604 TCATACAAGATTGGTACTTCAGTTG 57.094 36.000 0.00 0.00 0.00 3.16
3083 3710 6.371548 TCATACAAGATTGGTACTTCAGTTGC 59.628 38.462 0.00 0.00 0.00 4.17
3085 3712 3.788227 AGATTGGTACTTCAGTTGCCA 57.212 42.857 0.00 0.38 32.67 4.92
3087 3714 5.435686 AGATTGGTACTTCAGTTGCCATA 57.564 39.130 0.00 0.00 33.91 2.74
3093 3720 2.561569 ACTTCAGTTGCCATATACGCC 58.438 47.619 0.00 0.00 0.00 5.68
3095 3722 2.928801 TCAGTTGCCATATACGCCAT 57.071 45.000 0.00 0.00 0.00 4.40
3096 3723 2.766313 TCAGTTGCCATATACGCCATC 58.234 47.619 0.00 0.00 0.00 3.51
3097 3724 2.368548 TCAGTTGCCATATACGCCATCT 59.631 45.455 0.00 0.00 0.00 2.90
3119 3746 3.319405 TCTCTCTCTCGAAAAGTGCAAGT 59.681 43.478 0.00 0.00 0.00 3.16
3129 3756 0.037232 AAGTGCAAGTAGAGGCCGAC 60.037 55.000 0.00 0.00 0.00 4.79
3148 3778 4.695455 CCGACCTTCATTGAGCTCTTTTTA 59.305 41.667 16.19 0.00 0.00 1.52
3163 3793 5.289434 GCTCTTTTTATTCAGGGAAAATGCG 59.711 40.000 0.00 0.00 0.00 4.73
3168 3798 7.793927 TTTTATTCAGGGAAAATGCGTTTTT 57.206 28.000 17.39 7.44 40.25 1.94
3181 3811 4.052159 TGCGTTTTTCACACATCCAAAT 57.948 36.364 0.00 0.00 0.00 2.32
3305 3940 9.476202 AAGTACACAGATTAAAATTGGCTTTTC 57.524 29.630 0.00 0.00 38.09 2.29
3322 3957 4.213270 GCTTTTCCTTTGTTGTATTTGGGC 59.787 41.667 0.00 0.00 0.00 5.36
3332 3967 9.442047 CTTTGTTGTATTTGGGCCAAATATTTA 57.558 29.630 39.75 29.38 44.54 1.40
3336 3971 9.476202 GTTGTATTTGGGCCAAATATTTATCTC 57.524 33.333 39.75 28.92 44.54 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.746615 CATGAAGGTCACCGCCCAG 60.747 63.158 0.00 0.00 0.00 4.45
8 9 2.350895 CATGAAGGTCACCGCCCA 59.649 61.111 0.00 0.00 0.00 5.36
9 10 2.438434 CCATGAAGGTCACCGCCC 60.438 66.667 0.00 0.00 0.00 6.13
10 11 2.438434 CCCATGAAGGTCACCGCC 60.438 66.667 0.00 0.00 34.66 6.13
13 14 1.303282 GGGTCCCATGAAGGTCACC 59.697 63.158 1.78 0.00 37.60 4.02
14 15 0.404040 TTGGGTCCCATGAAGGTCAC 59.596 55.000 12.68 0.00 31.53 3.67
15 16 0.698238 CTTGGGTCCCATGAAGGTCA 59.302 55.000 17.29 0.00 31.53 4.02
16 17 0.991920 TCTTGGGTCCCATGAAGGTC 59.008 55.000 21.45 0.00 35.26 3.85
17 18 0.995024 CTCTTGGGTCCCATGAAGGT 59.005 55.000 23.23 0.00 37.27 3.50
18 19 0.257039 CCTCTTGGGTCCCATGAAGG 59.743 60.000 23.23 20.95 37.27 3.46
19 20 0.394899 GCCTCTTGGGTCCCATGAAG 60.395 60.000 23.23 19.23 37.27 3.02
20 21 1.691219 GCCTCTTGGGTCCCATGAA 59.309 57.895 23.23 4.39 37.27 2.57
21 22 2.669133 CGCCTCTTGGGTCCCATGA 61.669 63.158 22.08 22.08 36.48 3.07
22 23 2.124570 CGCCTCTTGGGTCCCATG 60.125 66.667 12.68 14.79 37.43 3.66
23 24 3.411517 CCGCCTCTTGGGTCCCAT 61.412 66.667 12.68 0.00 37.43 4.00
24 25 4.974438 ACCGCCTCTTGGGTCCCA 62.974 66.667 6.47 6.47 37.43 4.37
25 26 4.410400 CACCGCCTCTTGGGTCCC 62.410 72.222 0.00 0.00 37.43 4.46
26 27 4.410400 CCACCGCCTCTTGGGTCC 62.410 72.222 0.00 0.00 37.43 4.46
37 38 2.830186 TAAACATGGGAGGCCACCGC 62.830 60.000 13.57 9.09 0.00 5.68
38 39 1.029947 GTAAACATGGGAGGCCACCG 61.030 60.000 13.57 1.92 0.00 4.94
39 40 0.331616 AGTAAACATGGGAGGCCACC 59.668 55.000 11.39 11.39 0.00 4.61
40 41 2.092323 GAAGTAAACATGGGAGGCCAC 58.908 52.381 5.01 0.00 0.00 5.01
41 42 1.992557 AGAAGTAAACATGGGAGGCCA 59.007 47.619 5.01 0.00 0.00 5.36
42 43 2.644676 GAGAAGTAAACATGGGAGGCC 58.355 52.381 0.00 0.00 0.00 5.19
43 44 2.239907 AGGAGAAGTAAACATGGGAGGC 59.760 50.000 0.00 0.00 0.00 4.70
44 45 3.430929 CGAGGAGAAGTAAACATGGGAGG 60.431 52.174 0.00 0.00 0.00 4.30
45 46 3.447586 TCGAGGAGAAGTAAACATGGGAG 59.552 47.826 0.00 0.00 0.00 4.30
46 47 3.437213 TCGAGGAGAAGTAAACATGGGA 58.563 45.455 0.00 0.00 0.00 4.37
47 48 3.887621 TCGAGGAGAAGTAAACATGGG 57.112 47.619 0.00 0.00 0.00 4.00
48 49 5.011090 TCATCGAGGAGAAGTAAACATGG 57.989 43.478 0.00 0.00 0.00 3.66
49 50 5.464722 CCATCATCGAGGAGAAGTAAACATG 59.535 44.000 5.80 0.00 0.00 3.21
50 51 5.605534 CCATCATCGAGGAGAAGTAAACAT 58.394 41.667 5.80 0.00 0.00 2.71
51 52 4.680708 GCCATCATCGAGGAGAAGTAAACA 60.681 45.833 5.80 0.00 0.00 2.83
52 53 3.804873 GCCATCATCGAGGAGAAGTAAAC 59.195 47.826 5.80 0.00 0.00 2.01
53 54 3.490933 CGCCATCATCGAGGAGAAGTAAA 60.491 47.826 5.80 0.00 0.00 2.01
54 55 2.034685 CGCCATCATCGAGGAGAAGTAA 59.965 50.000 5.80 0.00 0.00 2.24
55 56 1.609072 CGCCATCATCGAGGAGAAGTA 59.391 52.381 5.80 0.00 0.00 2.24
56 57 0.387202 CGCCATCATCGAGGAGAAGT 59.613 55.000 5.80 0.00 0.00 3.01
57 58 0.319383 CCGCCATCATCGAGGAGAAG 60.319 60.000 5.80 0.00 0.00 2.85
58 59 1.742146 CCGCCATCATCGAGGAGAA 59.258 57.895 5.80 0.00 0.00 2.87
59 60 2.861101 GCCGCCATCATCGAGGAGA 61.861 63.158 5.80 0.00 0.00 3.71
60 61 2.356793 GCCGCCATCATCGAGGAG 60.357 66.667 5.80 0.00 0.00 3.69
61 62 4.284860 CGCCGCCATCATCGAGGA 62.285 66.667 0.65 0.65 0.00 3.71
65 66 4.293648 TACCCGCCGCCATCATCG 62.294 66.667 0.00 0.00 0.00 3.84
66 67 2.665185 GTACCCGCCGCCATCATC 60.665 66.667 0.00 0.00 0.00 2.92
67 68 4.602259 CGTACCCGCCGCCATCAT 62.602 66.667 0.00 0.00 0.00 2.45
87 88 2.821366 GAGGCATCACCCAGCACG 60.821 66.667 0.00 0.00 40.58 5.34
88 89 2.821366 CGAGGCATCACCCAGCAC 60.821 66.667 0.00 0.00 40.58 4.40
89 90 3.315142 GACGAGGCATCACCCAGCA 62.315 63.158 0.00 0.00 40.58 4.41
90 91 2.512515 GACGAGGCATCACCCAGC 60.513 66.667 0.00 0.00 40.58 4.85
91 92 1.021390 GTTGACGAGGCATCACCCAG 61.021 60.000 0.00 0.00 40.58 4.45
92 93 1.003839 GTTGACGAGGCATCACCCA 60.004 57.895 0.00 0.00 40.58 4.51
93 94 0.741221 GAGTTGACGAGGCATCACCC 60.741 60.000 0.00 0.00 40.58 4.61
94 95 0.741221 GGAGTTGACGAGGCATCACC 60.741 60.000 0.00 0.00 39.61 4.02
95 96 1.078759 CGGAGTTGACGAGGCATCAC 61.079 60.000 0.00 0.00 0.00 3.06
96 97 1.215382 CGGAGTTGACGAGGCATCA 59.785 57.895 0.00 0.00 0.00 3.07
97 98 2.167861 GCGGAGTTGACGAGGCATC 61.168 63.158 0.00 0.00 0.00 3.91
98 99 2.125512 GCGGAGTTGACGAGGCAT 60.126 61.111 0.00 0.00 0.00 4.40
99 100 2.652382 TTTGCGGAGTTGACGAGGCA 62.652 55.000 0.00 0.00 0.00 4.75
100 101 1.901650 CTTTGCGGAGTTGACGAGGC 61.902 60.000 0.00 0.00 0.00 4.70
101 102 1.901650 GCTTTGCGGAGTTGACGAGG 61.902 60.000 0.00 0.00 0.00 4.63
102 103 1.493311 GCTTTGCGGAGTTGACGAG 59.507 57.895 0.00 0.00 0.00 4.18
103 104 1.959226 GGCTTTGCGGAGTTGACGA 60.959 57.895 0.00 0.00 0.00 4.20
104 105 2.556287 GGCTTTGCGGAGTTGACG 59.444 61.111 0.00 0.00 0.00 4.35
105 106 2.954611 GGGCTTTGCGGAGTTGAC 59.045 61.111 0.00 0.00 0.00 3.18
106 107 2.668212 CGGGCTTTGCGGAGTTGA 60.668 61.111 0.00 0.00 0.00 3.18
107 108 4.404654 GCGGGCTTTGCGGAGTTG 62.405 66.667 0.00 0.00 0.00 3.16
108 109 4.643387 AGCGGGCTTTGCGGAGTT 62.643 61.111 0.00 0.00 37.44 3.01
136 137 3.419759 GTAACCACACGCTGCCGG 61.420 66.667 0.00 0.00 39.22 6.13
137 138 3.773630 CGTAACCACACGCTGCCG 61.774 66.667 0.00 0.00 41.14 5.69
143 144 2.462468 CGTTCGCGTAACCACACG 59.538 61.111 5.77 0.90 44.71 4.49
155 156 2.202440 ATCCGCAGTCGACGTTCG 60.202 61.111 10.46 14.09 42.10 3.95
156 157 2.158959 CCATCCGCAGTCGACGTTC 61.159 63.158 10.46 2.32 38.10 3.95
157 158 2.126071 CCATCCGCAGTCGACGTT 60.126 61.111 10.46 0.00 38.10 3.99
158 159 4.796231 GCCATCCGCAGTCGACGT 62.796 66.667 10.46 0.00 38.10 4.34
177 178 4.742201 CTCCCGTGCCTGTGACCG 62.742 72.222 0.00 0.00 0.00 4.79
178 179 4.394712 CCTCCCGTGCCTGTGACC 62.395 72.222 0.00 0.00 0.00 4.02
179 180 3.302347 CTCCTCCCGTGCCTGTGAC 62.302 68.421 0.00 0.00 0.00 3.67
180 181 2.997315 CTCCTCCCGTGCCTGTGA 60.997 66.667 0.00 0.00 0.00 3.58
181 182 4.767255 GCTCCTCCCGTGCCTGTG 62.767 72.222 0.00 0.00 0.00 3.66
186 187 4.509737 GTACCGCTCCTCCCGTGC 62.510 72.222 0.00 0.00 0.00 5.34
187 188 4.189188 CGTACCGCTCCTCCCGTG 62.189 72.222 0.00 0.00 0.00 4.94
188 189 4.415150 TCGTACCGCTCCTCCCGT 62.415 66.667 0.00 0.00 0.00 5.28
189 190 3.885521 GTCGTACCGCTCCTCCCG 61.886 72.222 0.00 0.00 0.00 5.14
190 191 2.753043 TGTCGTACCGCTCCTCCC 60.753 66.667 0.00 0.00 0.00 4.30
191 192 2.488820 GTGTCGTACCGCTCCTCC 59.511 66.667 0.00 0.00 0.00 4.30
192 193 2.099831 CGTGTCGTACCGCTCCTC 59.900 66.667 0.00 0.00 0.00 3.71
193 194 3.437795 CCGTGTCGTACCGCTCCT 61.438 66.667 0.00 0.00 0.00 3.69
212 213 3.343421 GTGGTTGCCGTGGACGAC 61.343 66.667 0.00 0.00 43.02 4.34
213 214 4.953868 CGTGGTTGCCGTGGACGA 62.954 66.667 0.00 0.00 43.02 4.20
214 215 4.953868 TCGTGGTTGCCGTGGACG 62.954 66.667 0.00 0.00 39.44 4.79
215 216 2.358247 ATCGTGGTTGCCGTGGAC 60.358 61.111 0.00 0.00 0.00 4.02
216 217 2.358125 CATCGTGGTTGCCGTGGA 60.358 61.111 0.00 0.00 0.00 4.02
217 218 4.101790 GCATCGTGGTTGCCGTGG 62.102 66.667 0.00 0.00 33.95 4.94
252 253 3.423154 CACTCCCGGCGTTGAAGC 61.423 66.667 6.01 0.00 0.00 3.86
253 254 1.738099 CTCACTCCCGGCGTTGAAG 60.738 63.158 6.01 0.00 0.00 3.02
254 255 2.154798 CTCTCACTCCCGGCGTTGAA 62.155 60.000 6.01 0.00 0.00 2.69
255 256 2.599281 TCTCACTCCCGGCGTTGA 60.599 61.111 6.01 0.56 0.00 3.18
256 257 2.125912 CTCTCACTCCCGGCGTTG 60.126 66.667 6.01 0.00 0.00 4.10
257 258 3.382832 CCTCTCACTCCCGGCGTT 61.383 66.667 6.01 0.00 0.00 4.84
258 259 4.680537 ACCTCTCACTCCCGGCGT 62.681 66.667 6.01 0.00 0.00 5.68
259 260 3.827898 GACCTCTCACTCCCGGCG 61.828 72.222 0.00 0.00 0.00 6.46
260 261 3.827898 CGACCTCTCACTCCCGGC 61.828 72.222 0.00 0.00 0.00 6.13
261 262 3.827898 GCGACCTCTCACTCCCGG 61.828 72.222 0.00 0.00 0.00 5.73
262 263 2.343163 GATGCGACCTCTCACTCCCG 62.343 65.000 0.00 0.00 0.00 5.14
263 264 1.439644 GATGCGACCTCTCACTCCC 59.560 63.158 0.00 0.00 0.00 4.30
264 265 1.439644 GGATGCGACCTCTCACTCC 59.560 63.158 0.00 0.00 0.00 3.85
265 266 1.064946 CGGATGCGACCTCTCACTC 59.935 63.158 0.00 0.00 0.00 3.51
266 267 1.251527 AACGGATGCGACCTCTCACT 61.252 55.000 15.49 0.00 0.00 3.41
267 268 0.802607 GAACGGATGCGACCTCTCAC 60.803 60.000 15.49 0.00 0.00 3.51
268 269 0.965866 AGAACGGATGCGACCTCTCA 60.966 55.000 15.49 0.00 0.00 3.27
269 270 1.022735 TAGAACGGATGCGACCTCTC 58.977 55.000 15.49 1.63 0.00 3.20
270 271 0.739561 GTAGAACGGATGCGACCTCT 59.260 55.000 15.49 13.89 0.00 3.69
271 272 0.591741 CGTAGAACGGATGCGACCTC 60.592 60.000 15.49 6.82 38.08 3.85
272 273 1.432251 CGTAGAACGGATGCGACCT 59.568 57.895 15.49 11.91 38.08 3.85
273 274 2.228914 GCGTAGAACGGATGCGACC 61.229 63.158 15.49 4.14 42.82 4.79
274 275 2.228914 GGCGTAGAACGGATGCGAC 61.229 63.158 15.49 7.05 42.82 5.19
275 276 2.103538 GGCGTAGAACGGATGCGA 59.896 61.111 15.49 0.00 42.82 5.10
276 277 3.320078 CGGCGTAGAACGGATGCG 61.320 66.667 4.58 4.58 42.82 4.73
282 283 0.734942 ATTCACACCGGCGTAGAACG 60.735 55.000 6.01 0.00 45.88 3.95
283 284 0.719465 CATTCACACCGGCGTAGAAC 59.281 55.000 6.01 0.00 0.00 3.01
284 285 1.017177 GCATTCACACCGGCGTAGAA 61.017 55.000 6.01 5.65 0.00 2.10
285 286 1.447140 GCATTCACACCGGCGTAGA 60.447 57.895 6.01 0.00 0.00 2.59
286 287 2.798501 CGCATTCACACCGGCGTAG 61.799 63.158 6.01 0.00 44.11 3.51
287 288 2.811747 CGCATTCACACCGGCGTA 60.812 61.111 6.01 0.00 44.11 4.42
290 291 3.499737 CTCCGCATTCACACCGGC 61.500 66.667 0.00 0.00 41.68 6.13
291 292 3.499737 GCTCCGCATTCACACCGG 61.500 66.667 0.00 0.00 43.21 5.28
292 293 3.853330 CGCTCCGCATTCACACCG 61.853 66.667 0.00 0.00 0.00 4.94
293 294 3.499737 CCGCTCCGCATTCACACC 61.500 66.667 0.00 0.00 0.00 4.16
294 295 4.166011 GCCGCTCCGCATTCACAC 62.166 66.667 0.00 0.00 0.00 3.82
304 305 2.098831 GTTGTAGAACGGCCGCTCC 61.099 63.158 28.58 14.82 0.00 4.70
305 306 3.471399 GTTGTAGAACGGCCGCTC 58.529 61.111 28.58 24.43 0.00 5.03
325 326 2.411701 CAGCTGCCCGCATTCATG 59.588 61.111 0.00 0.00 42.61 3.07
326 327 2.831742 CCAGCTGCCCGCATTCAT 60.832 61.111 8.66 0.00 42.61 2.57
343 344 2.509786 TATGTTTCCGTCCGGCGC 60.510 61.111 12.03 0.00 39.71 6.53
344 345 2.510594 CGTATGTTTCCGTCCGGCG 61.511 63.158 10.75 10.75 40.95 6.46
345 346 2.805807 GCGTATGTTTCCGTCCGGC 61.806 63.158 0.00 0.00 34.68 6.13
346 347 2.510594 CGCGTATGTTTCCGTCCGG 61.511 63.158 0.00 0.00 0.00 5.14
347 348 2.510594 CCGCGTATGTTTCCGTCCG 61.511 63.158 4.92 0.00 0.00 4.79
348 349 2.169146 CCCGCGTATGTTTCCGTCC 61.169 63.158 4.92 0.00 0.00 4.79
349 350 2.805807 GCCCGCGTATGTTTCCGTC 61.806 63.158 4.92 0.00 0.00 4.79
350 351 2.816520 GCCCGCGTATGTTTCCGT 60.817 61.111 4.92 0.00 0.00 4.69
351 352 3.920553 CGCCCGCGTATGTTTCCG 61.921 66.667 4.92 0.00 34.35 4.30
352 353 4.232248 GCGCCCGCGTATGTTTCC 62.232 66.667 11.18 0.00 42.09 3.13
366 367 4.807631 ATTAACCCCCACCCGCGC 62.808 66.667 0.00 0.00 0.00 6.86
367 368 2.826738 CATTAACCCCCACCCGCG 60.827 66.667 0.00 0.00 0.00 6.46
368 369 2.441348 CCATTAACCCCCACCCGC 60.441 66.667 0.00 0.00 0.00 6.13
369 370 1.379309 CACCATTAACCCCCACCCG 60.379 63.158 0.00 0.00 0.00 5.28
370 371 1.001120 CCACCATTAACCCCCACCC 59.999 63.158 0.00 0.00 0.00 4.61
371 372 1.001120 CCCACCATTAACCCCCACC 59.999 63.158 0.00 0.00 0.00 4.61
372 373 1.684391 GCCCACCATTAACCCCCAC 60.684 63.158 0.00 0.00 0.00 4.61
373 374 2.774327 GCCCACCATTAACCCCCA 59.226 61.111 0.00 0.00 0.00 4.96
374 375 2.042333 GGCCCACCATTAACCCCC 60.042 66.667 0.00 0.00 35.26 5.40
375 376 2.774327 TGGCCCACCATTAACCCC 59.226 61.111 0.00 0.00 42.67 4.95
383 384 2.829384 GGTTCTGACTGGCCCACCA 61.829 63.158 0.00 0.00 46.51 4.17
384 385 2.034221 GGTTCTGACTGGCCCACC 59.966 66.667 0.00 0.00 0.00 4.61
385 386 2.358737 CGGTTCTGACTGGCCCAC 60.359 66.667 0.00 0.00 0.00 4.61
386 387 3.636231 CCGGTTCTGACTGGCCCA 61.636 66.667 0.00 0.00 45.01 5.36
391 392 1.546029 TCTCACATCCGGTTCTGACTG 59.454 52.381 0.00 0.00 0.00 3.51
392 393 1.821753 CTCTCACATCCGGTTCTGACT 59.178 52.381 0.00 0.00 0.00 3.41
393 394 1.546476 ACTCTCACATCCGGTTCTGAC 59.454 52.381 0.00 0.00 0.00 3.51
394 395 1.546029 CACTCTCACATCCGGTTCTGA 59.454 52.381 0.00 0.00 0.00 3.27
395 396 1.404717 CCACTCTCACATCCGGTTCTG 60.405 57.143 0.00 0.09 0.00 3.02
396 397 0.898320 CCACTCTCACATCCGGTTCT 59.102 55.000 0.00 0.00 0.00 3.01
397 398 0.608640 ACCACTCTCACATCCGGTTC 59.391 55.000 0.00 0.00 0.00 3.62
398 399 1.002087 GAACCACTCTCACATCCGGTT 59.998 52.381 0.00 0.00 39.38 4.44
399 400 0.608640 GAACCACTCTCACATCCGGT 59.391 55.000 0.00 0.00 0.00 5.28
400 401 0.458543 CGAACCACTCTCACATCCGG 60.459 60.000 0.00 0.00 0.00 5.14
401 402 0.458543 CCGAACCACTCTCACATCCG 60.459 60.000 0.00 0.00 0.00 4.18
402 403 0.895530 TCCGAACCACTCTCACATCC 59.104 55.000 0.00 0.00 0.00 3.51
403 404 1.732732 CGTCCGAACCACTCTCACATC 60.733 57.143 0.00 0.00 0.00 3.06
404 405 0.243907 CGTCCGAACCACTCTCACAT 59.756 55.000 0.00 0.00 0.00 3.21
405 406 1.658114 CGTCCGAACCACTCTCACA 59.342 57.895 0.00 0.00 0.00 3.58
406 407 1.733399 GCGTCCGAACCACTCTCAC 60.733 63.158 0.00 0.00 0.00 3.51
407 408 2.649034 GCGTCCGAACCACTCTCA 59.351 61.111 0.00 0.00 0.00 3.27
408 409 2.126031 GGCGTCCGAACCACTCTC 60.126 66.667 0.00 0.00 0.00 3.20
409 410 2.600769 AGGCGTCCGAACCACTCT 60.601 61.111 0.00 0.00 0.00 3.24
410 411 1.870055 TACAGGCGTCCGAACCACTC 61.870 60.000 0.00 0.00 0.00 3.51
411 412 1.466025 TTACAGGCGTCCGAACCACT 61.466 55.000 0.00 0.00 0.00 4.00
412 413 0.600782 TTTACAGGCGTCCGAACCAC 60.601 55.000 0.00 0.00 0.00 4.16
413 414 0.320073 CTTTACAGGCGTCCGAACCA 60.320 55.000 0.00 0.00 0.00 3.67
414 415 1.632948 GCTTTACAGGCGTCCGAACC 61.633 60.000 0.00 0.00 0.00 3.62
415 416 0.947180 TGCTTTACAGGCGTCCGAAC 60.947 55.000 0.00 0.00 0.00 3.95
416 417 0.249953 TTGCTTTACAGGCGTCCGAA 60.250 50.000 0.00 0.00 0.00 4.30
417 418 0.249953 TTTGCTTTACAGGCGTCCGA 60.250 50.000 0.00 0.00 0.00 4.55
418 419 0.165944 CTTTGCTTTACAGGCGTCCG 59.834 55.000 0.00 0.00 0.00 4.79
419 420 0.109735 GCTTTGCTTTACAGGCGTCC 60.110 55.000 0.00 0.00 0.00 4.79
420 421 0.109735 GGCTTTGCTTTACAGGCGTC 60.110 55.000 0.00 0.00 32.03 5.19
421 422 1.524008 GGGCTTTGCTTTACAGGCGT 61.524 55.000 0.00 0.00 33.93 5.68
422 423 1.212751 GGGCTTTGCTTTACAGGCG 59.787 57.895 0.00 0.00 33.93 5.52
423 424 0.528017 GAGGGCTTTGCTTTACAGGC 59.472 55.000 0.00 0.00 0.00 4.85
424 425 1.177401 GGAGGGCTTTGCTTTACAGG 58.823 55.000 0.00 0.00 0.00 4.00
425 426 2.206576 AGGAGGGCTTTGCTTTACAG 57.793 50.000 0.00 0.00 0.00 2.74
426 427 2.642807 ACTAGGAGGGCTTTGCTTTACA 59.357 45.455 0.00 0.00 0.00 2.41
427 428 3.351794 ACTAGGAGGGCTTTGCTTTAC 57.648 47.619 0.00 0.00 0.00 2.01
428 429 4.382386 AAACTAGGAGGGCTTTGCTTTA 57.618 40.909 0.00 0.00 0.00 1.85
429 430 2.980246 AACTAGGAGGGCTTTGCTTT 57.020 45.000 0.00 0.00 0.00 3.51
430 431 2.980246 AAACTAGGAGGGCTTTGCTT 57.020 45.000 0.00 0.00 0.00 3.91
431 432 4.527944 GAATAAACTAGGAGGGCTTTGCT 58.472 43.478 0.00 0.00 0.00 3.91
432 433 3.632604 GGAATAAACTAGGAGGGCTTTGC 59.367 47.826 0.00 0.00 0.00 3.68
433 434 3.877508 CGGAATAAACTAGGAGGGCTTTG 59.122 47.826 0.00 0.00 0.00 2.77
434 435 3.118000 CCGGAATAAACTAGGAGGGCTTT 60.118 47.826 0.00 0.00 0.00 3.51
435 436 2.438392 CCGGAATAAACTAGGAGGGCTT 59.562 50.000 0.00 0.00 0.00 4.35
436 437 2.047830 CCGGAATAAACTAGGAGGGCT 58.952 52.381 0.00 0.00 0.00 5.19
437 438 1.767088 ACCGGAATAAACTAGGAGGGC 59.233 52.381 9.46 0.00 0.00 5.19
438 439 4.196971 CAAACCGGAATAAACTAGGAGGG 58.803 47.826 9.46 0.00 0.00 4.30
439 440 3.626217 GCAAACCGGAATAAACTAGGAGG 59.374 47.826 9.46 0.00 0.00 4.30
440 441 3.308866 CGCAAACCGGAATAAACTAGGAG 59.691 47.826 9.46 0.00 0.00 3.69
441 442 3.264104 CGCAAACCGGAATAAACTAGGA 58.736 45.455 9.46 0.00 0.00 2.94
442 443 3.668596 CGCAAACCGGAATAAACTAGG 57.331 47.619 9.46 0.00 0.00 3.02
454 455 3.799420 TGAATTTTTCTTTCCGCAAACCG 59.201 39.130 0.00 0.00 0.00 4.44
455 456 5.047188 TCTGAATTTTTCTTTCCGCAAACC 58.953 37.500 0.00 0.00 0.00 3.27
456 457 5.051039 GGTCTGAATTTTTCTTTCCGCAAAC 60.051 40.000 0.00 0.00 0.00 2.93
457 458 5.047188 GGTCTGAATTTTTCTTTCCGCAAA 58.953 37.500 0.00 0.00 0.00 3.68
458 459 4.616953 GGTCTGAATTTTTCTTTCCGCAA 58.383 39.130 0.00 0.00 0.00 4.85
459 460 3.304391 CGGTCTGAATTTTTCTTTCCGCA 60.304 43.478 0.00 0.00 33.28 5.69
460 461 3.234386 CGGTCTGAATTTTTCTTTCCGC 58.766 45.455 0.00 0.00 33.28 5.54
461 462 3.234386 GCGGTCTGAATTTTTCTTTCCG 58.766 45.455 0.00 0.00 38.51 4.30
462 463 3.005367 TGGCGGTCTGAATTTTTCTTTCC 59.995 43.478 0.00 0.00 0.00 3.13
463 464 4.237349 TGGCGGTCTGAATTTTTCTTTC 57.763 40.909 0.00 0.00 0.00 2.62
464 465 4.664150 TTGGCGGTCTGAATTTTTCTTT 57.336 36.364 0.00 0.00 0.00 2.52
465 466 4.280677 TGATTGGCGGTCTGAATTTTTCTT 59.719 37.500 0.00 0.00 0.00 2.52
466 467 3.826157 TGATTGGCGGTCTGAATTTTTCT 59.174 39.130 0.00 0.00 0.00 2.52
467 468 4.173036 TGATTGGCGGTCTGAATTTTTC 57.827 40.909 0.00 0.00 0.00 2.29
468 469 4.599047 TTGATTGGCGGTCTGAATTTTT 57.401 36.364 0.00 0.00 0.00 1.94
469 470 4.599047 TTTGATTGGCGGTCTGAATTTT 57.401 36.364 0.00 0.00 0.00 1.82
470 471 4.675146 CGATTTGATTGGCGGTCTGAATTT 60.675 41.667 0.00 0.00 0.00 1.82
471 472 3.181497 CGATTTGATTGGCGGTCTGAATT 60.181 43.478 0.00 0.00 0.00 2.17
472 473 2.355756 CGATTTGATTGGCGGTCTGAAT 59.644 45.455 0.00 0.00 0.00 2.57
473 474 1.737236 CGATTTGATTGGCGGTCTGAA 59.263 47.619 0.00 0.00 0.00 3.02
474 475 1.066502 TCGATTTGATTGGCGGTCTGA 60.067 47.619 0.00 0.00 0.00 3.27
475 476 1.368641 TCGATTTGATTGGCGGTCTG 58.631 50.000 0.00 0.00 0.00 3.51
476 477 2.332063 ATCGATTTGATTGGCGGTCT 57.668 45.000 0.00 0.00 31.57 3.85
477 478 2.869801 TGTATCGATTTGATTGGCGGTC 59.130 45.455 1.71 0.00 38.57 4.79
478 479 2.872245 CTGTATCGATTTGATTGGCGGT 59.128 45.455 1.71 0.00 38.57 5.68
479 480 3.130633 TCTGTATCGATTTGATTGGCGG 58.869 45.455 1.71 0.00 38.57 6.13
480 481 4.143030 GGATCTGTATCGATTTGATTGGCG 60.143 45.833 1.71 0.00 38.57 5.69
481 482 4.143030 CGGATCTGTATCGATTTGATTGGC 60.143 45.833 1.71 0.00 38.57 4.52
482 483 4.143030 GCGGATCTGTATCGATTTGATTGG 60.143 45.833 1.71 3.30 38.57 3.16
483 484 4.433413 CGCGGATCTGTATCGATTTGATTG 60.433 45.833 1.71 4.08 38.57 2.67
484 485 3.675225 CGCGGATCTGTATCGATTTGATT 59.325 43.478 1.71 0.00 38.57 2.57
485 486 3.245797 CGCGGATCTGTATCGATTTGAT 58.754 45.455 1.71 5.23 41.30 2.57
486 487 2.034179 ACGCGGATCTGTATCGATTTGA 59.966 45.455 12.47 0.00 32.44 2.69
487 488 2.394708 ACGCGGATCTGTATCGATTTG 58.605 47.619 12.47 0.00 32.44 2.32
488 489 2.794910 CAACGCGGATCTGTATCGATTT 59.205 45.455 12.47 0.00 32.44 2.17
489 490 2.034179 TCAACGCGGATCTGTATCGATT 59.966 45.455 12.47 0.00 32.44 3.34
490 491 1.607148 TCAACGCGGATCTGTATCGAT 59.393 47.619 12.47 2.16 32.44 3.59
491 492 1.018910 TCAACGCGGATCTGTATCGA 58.981 50.000 12.47 0.00 32.44 3.59
492 493 1.835121 TTCAACGCGGATCTGTATCG 58.165 50.000 12.47 0.86 32.44 2.92
493 494 2.476619 CCATTCAACGCGGATCTGTATC 59.523 50.000 12.47 0.00 0.00 2.24
494 495 2.483876 CCATTCAACGCGGATCTGTAT 58.516 47.619 12.47 0.00 0.00 2.29
495 496 1.934589 CCATTCAACGCGGATCTGTA 58.065 50.000 12.47 0.00 0.00 2.74
496 497 1.369091 GCCATTCAACGCGGATCTGT 61.369 55.000 12.47 0.00 0.00 3.41
497 498 1.353103 GCCATTCAACGCGGATCTG 59.647 57.895 12.47 0.00 0.00 2.90
498 499 1.078497 TGCCATTCAACGCGGATCT 60.078 52.632 12.47 0.00 0.00 2.75
499 500 1.062525 GTGCCATTCAACGCGGATC 59.937 57.895 12.47 0.00 0.00 3.36
500 501 2.749865 CGTGCCATTCAACGCGGAT 61.750 57.895 12.47 0.00 36.21 4.18
501 502 3.418913 CGTGCCATTCAACGCGGA 61.419 61.111 12.47 0.00 36.21 5.54
502 503 3.418913 TCGTGCCATTCAACGCGG 61.419 61.111 12.47 0.00 40.08 6.46
503 504 2.202171 GTCGTGCCATTCAACGCG 60.202 61.111 3.53 3.53 40.97 6.01
504 505 1.440353 GTGTCGTGCCATTCAACGC 60.440 57.895 0.00 0.00 0.00 4.84
505 506 1.154672 CGTGTCGTGCCATTCAACG 60.155 57.895 0.00 0.00 0.00 4.10
506 507 1.440353 GCGTGTCGTGCCATTCAAC 60.440 57.895 0.00 0.00 0.00 3.18
507 508 2.942879 GCGTGTCGTGCCATTCAA 59.057 55.556 0.00 0.00 0.00 2.69
525 526 4.988598 AGCACCCGCAACCACGAG 62.989 66.667 0.00 0.00 42.27 4.18
526 527 4.980805 GAGCACCCGCAACCACGA 62.981 66.667 0.00 0.00 42.27 4.35
528 529 2.904866 TTGAGCACCCGCAACCAC 60.905 61.111 0.00 0.00 42.27 4.16
529 530 2.594303 CTTGAGCACCCGCAACCA 60.594 61.111 0.00 0.00 42.27 3.67
530 531 3.365265 CCTTGAGCACCCGCAACC 61.365 66.667 0.00 0.00 42.27 3.77
531 532 3.365265 CCCTTGAGCACCCGCAAC 61.365 66.667 0.00 0.00 42.27 4.17
532 533 3.842925 GACCCTTGAGCACCCGCAA 62.843 63.158 0.00 0.00 42.27 4.85
533 534 4.329545 GACCCTTGAGCACCCGCA 62.330 66.667 0.00 0.00 42.27 5.69
535 536 3.190738 TTGGACCCTTGAGCACCCG 62.191 63.158 0.00 0.00 0.00 5.28
536 537 1.303643 CTTGGACCCTTGAGCACCC 60.304 63.158 0.00 0.00 0.00 4.61
537 538 0.178990 AACTTGGACCCTTGAGCACC 60.179 55.000 0.00 0.00 0.00 5.01
538 539 0.954452 CAACTTGGACCCTTGAGCAC 59.046 55.000 0.00 0.00 0.00 4.40
539 540 0.550914 ACAACTTGGACCCTTGAGCA 59.449 50.000 0.00 0.00 0.00 4.26
540 541 1.338020 CAACAACTTGGACCCTTGAGC 59.662 52.381 0.00 0.00 0.00 4.26
551 552 1.542915 CAGGCCATCTCCAACAACTTG 59.457 52.381 5.01 0.00 0.00 3.16
552 553 1.548582 CCAGGCCATCTCCAACAACTT 60.549 52.381 5.01 0.00 0.00 2.66
553 554 0.038744 CCAGGCCATCTCCAACAACT 59.961 55.000 5.01 0.00 0.00 3.16
554 555 0.251341 ACCAGGCCATCTCCAACAAC 60.251 55.000 5.01 0.00 0.00 3.32
555 556 1.004277 GTACCAGGCCATCTCCAACAA 59.996 52.381 5.01 0.00 0.00 2.83
556 557 0.618458 GTACCAGGCCATCTCCAACA 59.382 55.000 5.01 0.00 0.00 3.33
557 558 0.462047 CGTACCAGGCCATCTCCAAC 60.462 60.000 5.01 0.00 0.00 3.77
558 559 1.904771 CGTACCAGGCCATCTCCAA 59.095 57.895 5.01 0.00 0.00 3.53
559 560 2.731571 GCGTACCAGGCCATCTCCA 61.732 63.158 5.01 0.00 0.00 3.86
560 561 2.109181 GCGTACCAGGCCATCTCC 59.891 66.667 5.01 0.00 0.00 3.71
561 562 1.227380 CAGCGTACCAGGCCATCTC 60.227 63.158 5.01 0.00 0.00 2.75
562 563 2.735772 CCAGCGTACCAGGCCATCT 61.736 63.158 5.01 0.00 0.00 2.90
563 564 2.203070 CCAGCGTACCAGGCCATC 60.203 66.667 5.01 0.00 0.00 3.51
564 565 4.489771 GCCAGCGTACCAGGCCAT 62.490 66.667 5.01 0.00 42.58 4.40
596 597 0.545171 CTCCATGCATCCACACCTCT 59.455 55.000 0.00 0.00 0.00 3.69
613 614 1.872679 GTACGTACTGCCGCTGCTC 60.873 63.158 18.47 0.00 38.71 4.26
642 643 2.513026 CTTCGGCTGGACCCACTCTG 62.513 65.000 0.00 0.00 33.26 3.35
993 1029 2.269241 GACGCAGGGAAGGAAGGG 59.731 66.667 0.00 0.00 0.00 3.95
1083 1155 1.135939 CCATCTGACGACGTACGCA 59.864 57.895 16.72 4.02 46.94 5.24
1439 1514 2.281345 CCCATGCTCATCCTCGCC 60.281 66.667 0.00 0.00 0.00 5.54
1449 1524 3.661648 AGGAAACCCGCCCATGCT 61.662 61.111 0.00 0.00 34.43 3.79
1452 1527 4.759205 GCCAGGAAACCCGCCCAT 62.759 66.667 0.00 0.00 0.00 4.00
1784 1862 3.908081 GGCATGCCATTGCTCCCG 61.908 66.667 32.08 0.00 42.38 5.14
1787 1865 2.106332 GCTGGCATGCCATTGCTC 59.894 61.111 38.47 20.65 46.15 4.26
1811 1889 4.148825 CCGCCTCCTCCGAACTGG 62.149 72.222 0.00 0.00 40.09 4.00
1889 1967 3.369471 CGTAGGAGTTGTCCATGAACCAT 60.369 47.826 0.00 0.00 46.80 3.55
2314 2398 8.817296 GCGAATGAAAATGAAACAAAATAAACG 58.183 29.630 0.00 0.00 0.00 3.60
2315 2399 9.862585 AGCGAATGAAAATGAAACAAAATAAAC 57.137 25.926 0.00 0.00 0.00 2.01
2472 2557 0.605589 GTGTGGGAAAGGAGAACCCG 60.606 60.000 0.00 0.00 45.91 5.28
2484 2569 2.158871 GGTGACAACAAGTAGTGTGGGA 60.159 50.000 0.00 0.00 40.60 4.37
2493 2578 2.590575 CGGCCGGTGACAACAAGT 60.591 61.111 20.10 0.00 0.00 3.16
2494 2579 1.890041 TTCGGCCGGTGACAACAAG 60.890 57.895 27.83 0.00 0.00 3.16
2495 2580 2.181521 GTTCGGCCGGTGACAACAA 61.182 57.895 27.83 6.40 0.00 2.83
2531 2616 3.512516 GCTGATGGAAGTGCCGCC 61.513 66.667 0.00 0.00 40.66 6.13
2593 2881 3.846430 GGGAGCGGGGGTTAGACG 61.846 72.222 0.00 0.00 0.00 4.18
2594 2882 3.477346 GGGGAGCGGGGGTTAGAC 61.477 72.222 0.00 0.00 0.00 2.59
2636 2935 3.016736 AGAACAGAAGGTGTGTGTTTGG 58.983 45.455 0.00 0.00 43.43 3.28
2637 2936 4.396166 AGAAGAACAGAAGGTGTGTGTTTG 59.604 41.667 0.00 0.00 43.43 2.93
2638 2937 4.589908 AGAAGAACAGAAGGTGTGTGTTT 58.410 39.130 0.00 0.00 43.43 2.83
2639 2938 4.192317 GAGAAGAACAGAAGGTGTGTGTT 58.808 43.478 0.00 0.00 45.91 3.32
2640 2939 3.432326 GGAGAAGAACAGAAGGTGTGTGT 60.432 47.826 0.00 0.00 40.26 3.72
2641 2940 3.134458 GGAGAAGAACAGAAGGTGTGTG 58.866 50.000 0.00 0.00 40.26 3.82
2642 2941 2.771943 TGGAGAAGAACAGAAGGTGTGT 59.228 45.455 0.00 0.00 40.26 3.72
2643 2942 3.475566 TGGAGAAGAACAGAAGGTGTG 57.524 47.619 0.00 0.00 40.26 3.82
2644 2943 3.199946 TGTTGGAGAAGAACAGAAGGTGT 59.800 43.478 0.00 0.00 43.24 4.16
2645 2944 3.561725 GTGTTGGAGAAGAACAGAAGGTG 59.438 47.826 0.00 0.00 34.02 4.00
2675 2974 0.325860 ATACTTAGGTGCGGGGTGGA 60.326 55.000 0.00 0.00 0.00 4.02
2689 2988 3.118371 GGTGGGTCGGAGATTTGATACTT 60.118 47.826 0.00 0.00 40.67 2.24
2691 2990 2.434702 AGGTGGGTCGGAGATTTGATAC 59.565 50.000 0.00 0.00 40.67 2.24
2693 2992 1.486726 GAGGTGGGTCGGAGATTTGAT 59.513 52.381 0.00 0.00 40.67 2.57
2698 2997 2.060980 GCAGAGGTGGGTCGGAGAT 61.061 63.158 0.00 0.00 40.67 2.75
2702 3001 1.961180 CTTAGGCAGAGGTGGGTCGG 61.961 65.000 0.00 0.00 0.00 4.79
2707 3006 1.202463 CGTCATCTTAGGCAGAGGTGG 60.202 57.143 1.33 0.00 34.68 4.61
2714 3013 2.202878 GCCGCGTCATCTTAGGCA 60.203 61.111 4.92 0.00 46.48 4.75
2745 3044 2.187073 GGGAACGAACTAGAGCCGA 58.813 57.895 0.00 0.00 0.00 5.54
2788 3087 1.302192 GACGGGTGGCTGCTTTACA 60.302 57.895 0.00 0.00 0.00 2.41
2834 3133 4.214327 GAGAAGGAGGCGGGCGAG 62.214 72.222 0.00 0.00 0.00 5.03
2840 3139 0.891373 TGTGAGAAGAGAAGGAGGCG 59.109 55.000 0.00 0.00 0.00 5.52
2841 3140 2.564947 TCTTGTGAGAAGAGAAGGAGGC 59.435 50.000 0.00 0.00 0.00 4.70
2842 3141 4.881019 TTCTTGTGAGAAGAGAAGGAGG 57.119 45.455 0.00 0.00 36.99 4.30
2845 3152 7.502120 TTCAATTTCTTGTGAGAAGAGAAGG 57.498 36.000 0.00 0.00 42.55 3.46
2877 3184 9.230932 GAGCTATTTGCAAGTTATCTGAATTTC 57.769 33.333 0.00 0.00 45.94 2.17
2893 3200 1.070975 CATCTCGCACGAGCTATTTGC 60.071 52.381 15.04 4.01 41.71 3.68
2904 3211 5.035443 ACGTTTATCTAAGTCATCTCGCAC 58.965 41.667 0.00 0.00 0.00 5.34
2907 3214 6.076040 CGAACACGTTTATCTAAGTCATCTCG 60.076 42.308 0.00 0.00 0.00 4.04
2910 3217 6.746364 AGTCGAACACGTTTATCTAAGTCATC 59.254 38.462 0.00 0.00 0.00 2.92
2976 3303 7.182817 AGCTTACATGTAACTCAATAGGTGA 57.817 36.000 14.35 0.00 34.17 4.02
2977 3304 8.414003 TCTAGCTTACATGTAACTCAATAGGTG 58.586 37.037 14.35 2.43 0.00 4.00
2978 3305 8.414778 GTCTAGCTTACATGTAACTCAATAGGT 58.585 37.037 14.35 10.64 0.00 3.08
2980 3307 9.457110 CTGTCTAGCTTACATGTAACTCAATAG 57.543 37.037 14.35 11.23 0.00 1.73
2981 3308 9.185680 TCTGTCTAGCTTACATGTAACTCAATA 57.814 33.333 14.35 6.61 0.00 1.90
2983 3310 7.176865 AGTCTGTCTAGCTTACATGTAACTCAA 59.823 37.037 14.35 6.36 0.00 3.02
2984 3311 6.659668 AGTCTGTCTAGCTTACATGTAACTCA 59.340 38.462 14.35 9.79 0.00 3.41
2995 3322 5.449553 TCATGGATCAGTCTGTCTAGCTTA 58.550 41.667 0.00 0.00 0.00 3.09
3009 3636 2.510800 TGAGCCCATTTCTCATGGATCA 59.489 45.455 2.20 4.00 41.64 2.92
3014 3641 3.349927 TGACTTGAGCCCATTTCTCATG 58.650 45.455 0.00 0.00 39.96 3.07
3021 3648 2.086869 CGTCAATGACTTGAGCCCATT 58.913 47.619 11.92 0.00 41.96 3.16
3067 3694 5.758296 CGTATATGGCAACTGAAGTACCAAT 59.242 40.000 8.68 7.04 37.74 3.16
3074 3701 2.560504 TGGCGTATATGGCAACTGAAG 58.439 47.619 18.15 0.00 41.96 3.02
3075 3702 2.700722 TGGCGTATATGGCAACTGAA 57.299 45.000 18.15 0.00 41.96 3.02
3077 3704 2.738846 GAGATGGCGTATATGGCAACTG 59.261 50.000 28.51 0.00 45.40 3.16
3082 3709 2.757868 AGAGAGAGATGGCGTATATGGC 59.242 50.000 11.47 11.47 0.00 4.40
3083 3710 4.269183 AGAGAGAGAGATGGCGTATATGG 58.731 47.826 0.00 0.00 0.00 2.74
3085 3712 4.081365 TCGAGAGAGAGAGATGGCGTATAT 60.081 45.833 0.00 0.00 34.84 0.86
3087 3714 2.037902 TCGAGAGAGAGAGATGGCGTAT 59.962 50.000 0.00 0.00 34.84 3.06
3093 3720 4.104776 GCACTTTTCGAGAGAGAGAGATG 58.895 47.826 5.06 0.00 43.69 2.90
3095 3722 3.149981 TGCACTTTTCGAGAGAGAGAGA 58.850 45.455 5.06 0.00 43.69 3.10
3096 3723 3.567576 TGCACTTTTCGAGAGAGAGAG 57.432 47.619 5.06 0.00 43.69 3.20
3097 3724 3.319405 ACTTGCACTTTTCGAGAGAGAGA 59.681 43.478 5.06 0.00 43.69 3.10
3119 3746 1.757118 CTCAATGAAGGTCGGCCTCTA 59.243 52.381 10.20 0.70 46.33 2.43
3129 3756 7.256286 CCTGAATAAAAAGAGCTCAATGAAGG 58.744 38.462 17.77 6.90 0.00 3.46
3132 3759 6.484288 TCCCTGAATAAAAAGAGCTCAATGA 58.516 36.000 17.77 0.00 0.00 2.57
3163 3793 8.087750 TCCAGATTATTTGGATGTGTGAAAAAC 58.912 33.333 0.00 0.00 39.74 2.43
3168 3798 7.773489 TTTTCCAGATTATTTGGATGTGTGA 57.227 32.000 5.27 0.00 43.87 3.58
3281 3916 8.088365 AGGAAAAGCCAATTTTAATCTGTGTAC 58.912 33.333 0.00 0.00 41.24 2.90
3305 3940 3.760580 TTGGCCCAAATACAACAAAGG 57.239 42.857 0.00 0.00 0.00 3.11
3332 3967 5.726980 TTTGCATGCTACCAAAAAGAGAT 57.273 34.783 20.33 0.00 0.00 2.75
3336 3971 7.830940 TGATTATTTGCATGCTACCAAAAAG 57.169 32.000 20.33 0.00 34.93 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.