Multiple sequence alignment - TraesCS2D01G074900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G074900 chr2D 100.000 2992 0 0 1 2992 32034506 32037497 0.000000e+00 5526.0
1 TraesCS2D01G074900 chr2D 86.863 1020 113 8 761 1771 32071964 32070957 0.000000e+00 1122.0
2 TraesCS2D01G074900 chr2B 92.425 1373 75 13 730 2090 52624980 52626335 0.000000e+00 1932.0
3 TraesCS2D01G074900 chr2B 90.819 1318 86 15 797 2090 52340515 52339209 0.000000e+00 1731.0
4 TraesCS2D01G074900 chr2B 86.391 845 79 18 2092 2920 52626383 52627207 0.000000e+00 891.0
5 TraesCS2D01G074900 chr2B 86.212 631 74 6 1 625 52616724 52617347 0.000000e+00 671.0
6 TraesCS2D01G074900 chr2B 84.932 657 60 20 2289 2920 52338961 52338319 1.960000e-176 628.0
7 TraesCS2D01G074900 chr2B 85.501 469 56 8 752 1216 52683499 52683039 2.090000e-131 479.0
8 TraesCS2D01G074900 chr2B 91.549 71 5 1 730 800 52340695 52340626 2.450000e-16 97.1
9 TraesCS2D01G074900 chr2A 91.364 1378 83 12 730 2090 34096255 34097613 0.000000e+00 1853.0
10 TraesCS2D01G074900 chr2A 86.111 1044 122 12 752 1790 34152400 34151375 0.000000e+00 1103.0
11 TraesCS2D01G074900 chr2A 93.857 407 19 2 2537 2943 34098142 34098542 2.550000e-170 608.0
12 TraesCS2D01G074900 chr2A 83.158 475 52 15 2094 2552 34097663 34098125 2.780000e-110 409.0
13 TraesCS2D01G074900 chr2A 92.000 50 4 0 2943 2992 507164926 507164975 1.490000e-08 71.3
14 TraesCS2D01G074900 chr1B 82.173 359 53 8 1 357 317436653 317437002 6.270000e-77 298.0
15 TraesCS2D01G074900 chr1A 82.173 359 52 10 1 357 286000076 286000424 6.270000e-77 298.0
16 TraesCS2D01G074900 chr1A 88.235 51 5 1 2943 2992 341902612 341902562 3.220000e-05 60.2
17 TraesCS2D01G074900 chr1D 80.278 360 57 11 1 357 221115828 221116176 2.960000e-65 259.0
18 TraesCS2D01G074900 chr1D 90.196 51 4 1 2943 2992 362630566 362630616 6.920000e-07 65.8
19 TraesCS2D01G074900 chr5D 92.157 51 4 0 2942 2992 23669508 23669558 4.140000e-09 73.1
20 TraesCS2D01G074900 chr5D 88.462 52 3 3 2943 2992 439827463 439827413 3.220000e-05 60.2
21 TraesCS2D01G074900 chr3D 90.196 51 4 1 2943 2992 452014900 452014850 6.920000e-07 65.8
22 TraesCS2D01G074900 chr3D 88.235 51 5 1 2943 2992 310313686 310313636 3.220000e-05 60.2
23 TraesCS2D01G074900 chr3B 90.196 51 4 1 2943 2992 273600026 273600076 6.920000e-07 65.8
24 TraesCS2D01G074900 chr4B 88.235 51 5 1 2943 2992 510875845 510875795 3.220000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G074900 chr2D 32034506 32037497 2991 False 5526.000000 5526 100.000000 1 2992 1 chr2D.!!$F1 2991
1 TraesCS2D01G074900 chr2D 32070957 32071964 1007 True 1122.000000 1122 86.863000 761 1771 1 chr2D.!!$R1 1010
2 TraesCS2D01G074900 chr2B 52624980 52627207 2227 False 1411.500000 1932 89.408000 730 2920 2 chr2B.!!$F2 2190
3 TraesCS2D01G074900 chr2B 52338319 52340695 2376 True 818.700000 1731 89.100000 730 2920 3 chr2B.!!$R2 2190
4 TraesCS2D01G074900 chr2B 52616724 52617347 623 False 671.000000 671 86.212000 1 625 1 chr2B.!!$F1 624
5 TraesCS2D01G074900 chr2A 34151375 34152400 1025 True 1103.000000 1103 86.111000 752 1790 1 chr2A.!!$R1 1038
6 TraesCS2D01G074900 chr2A 34096255 34098542 2287 False 956.666667 1853 89.459667 730 2943 3 chr2A.!!$F2 2213

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
289 290 0.029567 CTCATAGTCCGCTGACCGAC 59.970 60.0 4.47 0.00 42.81 4.79 F
629 630 0.032540 GCCCTTTTGCCACTTGAGTG 59.967 55.0 4.15 4.15 45.23 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1886 2120 0.243095 ACTCCTGCGGTTCTAACGTC 59.757 55.0 0.0 0.0 0.0 4.34 R
2324 2665 0.252193 AGGAGAGAAGAGGCAGCACT 60.252 55.0 0.0 0.0 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 3.699038 CCACTTTCCAACTCCTGAACAAA 59.301 43.478 0.00 0.00 0.00 2.83
53 54 4.440112 CCACTTTCCAACTCCTGAACAAAC 60.440 45.833 0.00 0.00 0.00 2.93
69 70 1.071314 AAACCCCAGGTCCATGTCCA 61.071 55.000 6.89 0.00 33.12 4.02
89 90 0.103208 GCCAGATCTGACCTACACCG 59.897 60.000 24.62 4.93 0.00 4.94
117 118 3.721706 CCCCAAAGGCGAGCTCCT 61.722 66.667 8.47 0.00 38.31 3.69
123 124 2.754664 AAAGGCGAGCTCCTTGGTGG 62.755 60.000 8.47 0.00 45.25 4.61
127 128 2.431683 GAGCTCCTTGGTGGCACA 59.568 61.111 20.82 2.61 35.26 4.57
140 141 2.026014 GCACACTGCCACCAAACG 59.974 61.111 0.00 0.00 37.42 3.60
141 142 2.721231 CACACTGCCACCAAACGG 59.279 61.111 0.00 0.00 0.00 4.44
142 143 2.518349 ACACTGCCACCAAACGGG 60.518 61.111 0.00 0.00 44.81 5.28
143 144 2.203280 CACTGCCACCAAACGGGA 60.203 61.111 0.00 0.00 41.15 5.14
144 145 2.113139 ACTGCCACCAAACGGGAG 59.887 61.111 0.00 0.00 46.73 4.30
148 149 2.203422 CCACCAAACGGGAGGCAA 60.203 61.111 0.00 0.00 40.76 4.52
149 150 2.268076 CCACCAAACGGGAGGCAAG 61.268 63.158 0.00 0.00 40.76 4.01
150 151 2.115266 ACCAAACGGGAGGCAAGG 59.885 61.111 0.00 0.00 41.15 3.61
151 152 2.434331 CCAAACGGGAGGCAAGGA 59.566 61.111 0.00 0.00 40.01 3.36
152 153 1.000896 CCAAACGGGAGGCAAGGAT 60.001 57.895 0.00 0.00 40.01 3.24
153 154 1.315257 CCAAACGGGAGGCAAGGATG 61.315 60.000 0.00 0.00 40.01 3.51
171 172 4.742201 CCGTCGTGGCCACTCCTG 62.742 72.222 32.28 17.60 35.26 3.86
172 173 4.742201 CGTCGTGGCCACTCCTGG 62.742 72.222 32.28 17.22 41.13 4.45
196 197 3.890527 GAGCATCCCTCAATGGTGT 57.109 52.632 0.00 0.00 40.45 4.16
198 199 2.565841 GAGCATCCCTCAATGGTGTAC 58.434 52.381 0.00 0.00 40.45 2.90
199 200 1.915489 AGCATCCCTCAATGGTGTACA 59.085 47.619 0.00 0.00 36.09 2.90
200 201 2.092753 AGCATCCCTCAATGGTGTACAG 60.093 50.000 0.00 0.00 36.09 2.74
201 202 2.092968 GCATCCCTCAATGGTGTACAGA 60.093 50.000 0.00 0.00 0.00 3.41
202 203 3.801698 CATCCCTCAATGGTGTACAGAG 58.198 50.000 0.00 0.00 0.00 3.35
203 204 1.555075 TCCCTCAATGGTGTACAGAGC 59.445 52.381 0.00 0.00 0.00 4.09
204 205 1.556911 CCCTCAATGGTGTACAGAGCT 59.443 52.381 0.00 0.00 0.00 4.09
205 206 2.625737 CCTCAATGGTGTACAGAGCTG 58.374 52.381 0.00 0.00 0.00 4.24
206 207 2.625737 CTCAATGGTGTACAGAGCTGG 58.374 52.381 0.00 0.00 34.19 4.85
207 208 1.278985 TCAATGGTGTACAGAGCTGGG 59.721 52.381 0.00 0.00 34.19 4.45
208 209 1.278985 CAATGGTGTACAGAGCTGGGA 59.721 52.381 0.00 0.00 34.19 4.37
209 210 1.656587 ATGGTGTACAGAGCTGGGAA 58.343 50.000 0.00 0.00 34.19 3.97
210 211 1.429930 TGGTGTACAGAGCTGGGAAA 58.570 50.000 0.00 0.00 34.19 3.13
211 212 1.771854 TGGTGTACAGAGCTGGGAAAA 59.228 47.619 0.00 0.00 34.19 2.29
212 213 2.224523 TGGTGTACAGAGCTGGGAAAAG 60.225 50.000 0.00 0.00 34.19 2.27
213 214 2.224548 GGTGTACAGAGCTGGGAAAAGT 60.225 50.000 0.00 0.00 34.19 2.66
214 215 3.007614 GGTGTACAGAGCTGGGAAAAGTA 59.992 47.826 0.00 0.00 34.19 2.24
215 216 4.323562 GGTGTACAGAGCTGGGAAAAGTAT 60.324 45.833 0.00 0.00 34.19 2.12
216 217 5.105064 GGTGTACAGAGCTGGGAAAAGTATA 60.105 44.000 0.00 0.00 34.19 1.47
217 218 6.043411 GTGTACAGAGCTGGGAAAAGTATAG 58.957 44.000 0.00 0.00 34.19 1.31
218 219 4.143986 ACAGAGCTGGGAAAAGTATAGC 57.856 45.455 0.00 0.00 34.19 2.97
219 220 3.118223 ACAGAGCTGGGAAAAGTATAGCC 60.118 47.826 0.00 0.00 35.05 3.93
220 221 2.439880 AGAGCTGGGAAAAGTATAGCCC 59.560 50.000 0.00 0.00 41.08 5.19
221 222 1.495148 AGCTGGGAAAAGTATAGCCCC 59.505 52.381 0.00 0.00 39.93 5.80
222 223 1.495148 GCTGGGAAAAGTATAGCCCCT 59.505 52.381 0.00 0.00 39.93 4.79
223 224 2.487445 GCTGGGAAAAGTATAGCCCCTC 60.487 54.545 0.00 0.00 39.93 4.30
224 225 1.766496 TGGGAAAAGTATAGCCCCTCG 59.234 52.381 0.00 0.00 39.93 4.63
225 226 2.044758 GGGAAAAGTATAGCCCCTCGA 58.955 52.381 0.00 0.00 34.39 4.04
226 227 2.224233 GGGAAAAGTATAGCCCCTCGAC 60.224 54.545 0.00 0.00 34.39 4.20
227 228 2.545322 GGAAAAGTATAGCCCCTCGACG 60.545 54.545 0.00 0.00 0.00 5.12
228 229 1.772836 AAAGTATAGCCCCTCGACGT 58.227 50.000 0.00 0.00 0.00 4.34
229 230 2.645838 AAGTATAGCCCCTCGACGTA 57.354 50.000 0.00 0.00 0.00 3.57
230 231 2.875094 AGTATAGCCCCTCGACGTAT 57.125 50.000 0.00 0.00 0.00 3.06
231 232 2.709213 AGTATAGCCCCTCGACGTATC 58.291 52.381 0.00 0.00 0.00 2.24
232 233 1.742268 GTATAGCCCCTCGACGTATCC 59.258 57.143 0.00 0.00 0.00 2.59
233 234 0.404812 ATAGCCCCTCGACGTATCCT 59.595 55.000 0.00 0.00 0.00 3.24
234 235 0.536687 TAGCCCCTCGACGTATCCTG 60.537 60.000 0.00 0.00 0.00 3.86
235 236 2.728817 CCCCTCGACGTATCCTGC 59.271 66.667 0.00 0.00 0.00 4.85
236 237 2.125326 CCCCTCGACGTATCCTGCA 61.125 63.158 0.00 0.00 0.00 4.41
237 238 1.065928 CCCTCGACGTATCCTGCAC 59.934 63.158 0.00 0.00 0.00 4.57
238 239 1.663379 CCCTCGACGTATCCTGCACA 61.663 60.000 0.00 0.00 0.00 4.57
239 240 0.525668 CCTCGACGTATCCTGCACAC 60.526 60.000 0.00 0.00 0.00 3.82
240 241 0.170339 CTCGACGTATCCTGCACACA 59.830 55.000 0.00 0.00 0.00 3.72
241 242 0.599060 TCGACGTATCCTGCACACAA 59.401 50.000 0.00 0.00 0.00 3.33
242 243 1.000052 TCGACGTATCCTGCACACAAA 60.000 47.619 0.00 0.00 0.00 2.83
243 244 1.999735 CGACGTATCCTGCACACAAAT 59.000 47.619 0.00 0.00 0.00 2.32
244 245 2.029244 CGACGTATCCTGCACACAAATC 59.971 50.000 0.00 0.00 0.00 2.17
245 246 3.262420 GACGTATCCTGCACACAAATCT 58.738 45.455 0.00 0.00 0.00 2.40
246 247 4.430007 GACGTATCCTGCACACAAATCTA 58.570 43.478 0.00 0.00 0.00 1.98
247 248 4.433615 ACGTATCCTGCACACAAATCTAG 58.566 43.478 0.00 0.00 0.00 2.43
248 249 3.246226 CGTATCCTGCACACAAATCTAGC 59.754 47.826 0.00 0.00 0.00 3.42
249 250 3.641434 ATCCTGCACACAAATCTAGCT 57.359 42.857 0.00 0.00 0.00 3.32
250 251 3.423539 TCCTGCACACAAATCTAGCTT 57.576 42.857 0.00 0.00 0.00 3.74
251 252 3.076621 TCCTGCACACAAATCTAGCTTG 58.923 45.455 0.00 0.00 0.00 4.01
252 253 2.163010 CCTGCACACAAATCTAGCTTGG 59.837 50.000 0.00 0.00 0.00 3.61
253 254 3.076621 CTGCACACAAATCTAGCTTGGA 58.923 45.455 0.00 0.00 0.00 3.53
254 255 3.076621 TGCACACAAATCTAGCTTGGAG 58.923 45.455 0.00 0.00 0.00 3.86
255 256 3.244526 TGCACACAAATCTAGCTTGGAGA 60.245 43.478 0.00 0.00 0.00 3.71
256 257 3.373439 GCACACAAATCTAGCTTGGAGAG 59.627 47.826 0.00 0.00 0.00 3.20
257 258 3.937706 CACACAAATCTAGCTTGGAGAGG 59.062 47.826 0.00 0.00 0.00 3.69
258 259 3.054802 ACACAAATCTAGCTTGGAGAGGG 60.055 47.826 0.00 0.00 0.00 4.30
259 260 3.198635 CACAAATCTAGCTTGGAGAGGGA 59.801 47.826 0.00 0.00 0.00 4.20
260 261 3.454082 ACAAATCTAGCTTGGAGAGGGAG 59.546 47.826 0.00 0.00 0.00 4.30
261 262 2.397044 ATCTAGCTTGGAGAGGGAGG 57.603 55.000 0.00 0.00 0.00 4.30
262 263 0.263172 TCTAGCTTGGAGAGGGAGGG 59.737 60.000 0.00 0.00 0.00 4.30
263 264 0.263172 CTAGCTTGGAGAGGGAGGGA 59.737 60.000 0.00 0.00 0.00 4.20
264 265 0.716591 TAGCTTGGAGAGGGAGGGAA 59.283 55.000 0.00 0.00 0.00 3.97
265 266 0.178861 AGCTTGGAGAGGGAGGGAAA 60.179 55.000 0.00 0.00 0.00 3.13
266 267 0.034960 GCTTGGAGAGGGAGGGAAAC 60.035 60.000 0.00 0.00 0.00 2.78
280 281 2.311124 GGAAACCACCTCATAGTCCG 57.689 55.000 0.00 0.00 0.00 4.79
281 282 1.653151 GAAACCACCTCATAGTCCGC 58.347 55.000 0.00 0.00 0.00 5.54
282 283 1.207329 GAAACCACCTCATAGTCCGCT 59.793 52.381 0.00 0.00 0.00 5.52
283 284 0.537188 AACCACCTCATAGTCCGCTG 59.463 55.000 0.00 0.00 0.00 5.18
284 285 0.324368 ACCACCTCATAGTCCGCTGA 60.324 55.000 0.00 0.00 0.00 4.26
285 286 0.103208 CCACCTCATAGTCCGCTGAC 59.897 60.000 0.00 0.00 42.09 3.51
286 287 0.103208 CACCTCATAGTCCGCTGACC 59.897 60.000 4.47 0.00 42.81 4.02
287 288 1.360551 CCTCATAGTCCGCTGACCG 59.639 63.158 4.47 0.00 42.81 4.79
288 289 1.101635 CCTCATAGTCCGCTGACCGA 61.102 60.000 4.47 0.00 42.81 4.69
289 290 0.029567 CTCATAGTCCGCTGACCGAC 59.970 60.000 4.47 0.00 42.81 4.79
290 291 1.298413 CATAGTCCGCTGACCGACG 60.298 63.158 4.47 0.00 42.81 5.12
312 313 4.467084 GACGCCGGAGATGCCCAA 62.467 66.667 13.83 0.00 0.00 4.12
313 314 4.778143 ACGCCGGAGATGCCCAAC 62.778 66.667 13.83 0.00 0.00 3.77
314 315 4.473520 CGCCGGAGATGCCCAACT 62.474 66.667 5.05 0.00 0.00 3.16
315 316 2.825836 GCCGGAGATGCCCAACTG 60.826 66.667 5.05 0.00 0.00 3.16
316 317 2.825836 CCGGAGATGCCCAACTGC 60.826 66.667 0.00 0.00 0.00 4.40
317 318 2.825836 CGGAGATGCCCAACTGCC 60.826 66.667 0.00 0.00 0.00 4.85
318 319 2.825836 GGAGATGCCCAACTGCCG 60.826 66.667 0.00 0.00 0.00 5.69
319 320 2.045926 GAGATGCCCAACTGCCGT 60.046 61.111 0.00 0.00 0.00 5.68
320 321 2.045926 AGATGCCCAACTGCCGTC 60.046 61.111 0.00 0.00 0.00 4.79
321 322 3.499737 GATGCCCAACTGCCGTCG 61.500 66.667 0.00 0.00 0.00 5.12
322 323 4.329545 ATGCCCAACTGCCGTCGT 62.330 61.111 0.00 0.00 0.00 4.34
324 325 4.980805 GCCCAACTGCCGTCGTGA 62.981 66.667 0.00 0.00 0.00 4.35
325 326 3.041940 CCCAACTGCCGTCGTGAC 61.042 66.667 0.00 0.00 0.00 3.67
326 327 2.279851 CCAACTGCCGTCGTGACA 60.280 61.111 0.41 0.00 0.00 3.58
327 328 2.594962 CCAACTGCCGTCGTGACAC 61.595 63.158 0.00 0.00 0.00 3.67
328 329 2.279918 AACTGCCGTCGTGACACC 60.280 61.111 0.00 0.00 0.00 4.16
329 330 3.083848 AACTGCCGTCGTGACACCA 62.084 57.895 0.00 0.00 0.00 4.17
330 331 3.036084 CTGCCGTCGTGACACCAC 61.036 66.667 0.00 0.00 39.86 4.16
331 332 4.595538 TGCCGTCGTGACACCACC 62.596 66.667 0.00 0.00 40.12 4.61
333 334 3.918977 CCGTCGTGACACCACCCA 61.919 66.667 0.00 0.00 40.12 4.51
334 335 2.355837 CGTCGTGACACCACCCAG 60.356 66.667 0.00 0.00 40.12 4.45
335 336 2.852180 CGTCGTGACACCACCCAGA 61.852 63.158 0.00 0.00 40.12 3.86
336 337 1.300697 GTCGTGACACCACCCAGAC 60.301 63.158 0.00 0.00 40.12 3.51
337 338 2.030562 CGTGACACCACCCAGACC 59.969 66.667 0.00 0.00 40.12 3.85
338 339 2.030562 GTGACACCACCCAGACCG 59.969 66.667 0.00 0.00 37.33 4.79
339 340 3.936203 TGACACCACCCAGACCGC 61.936 66.667 0.00 0.00 0.00 5.68
340 341 4.699522 GACACCACCCAGACCGCC 62.700 72.222 0.00 0.00 0.00 6.13
365 366 3.069946 CCGCCACCATGCCACATT 61.070 61.111 0.00 0.00 0.00 2.71
366 367 2.491152 CGCCACCATGCCACATTC 59.509 61.111 0.00 0.00 0.00 2.67
367 368 2.341875 CGCCACCATGCCACATTCA 61.342 57.895 0.00 0.00 0.00 2.57
368 369 1.514087 GCCACCATGCCACATTCAG 59.486 57.895 0.00 0.00 0.00 3.02
369 370 0.966875 GCCACCATGCCACATTCAGA 60.967 55.000 0.00 0.00 0.00 3.27
370 371 1.548081 CCACCATGCCACATTCAGAA 58.452 50.000 0.00 0.00 0.00 3.02
371 372 1.475280 CCACCATGCCACATTCAGAAG 59.525 52.381 0.00 0.00 0.00 2.85
372 373 1.475280 CACCATGCCACATTCAGAAGG 59.525 52.381 0.00 0.00 0.00 3.46
373 374 1.076024 ACCATGCCACATTCAGAAGGT 59.924 47.619 0.00 0.00 0.00 3.50
374 375 1.747355 CCATGCCACATTCAGAAGGTC 59.253 52.381 0.00 0.00 0.00 3.85
375 376 1.747355 CATGCCACATTCAGAAGGTCC 59.253 52.381 0.00 0.00 0.00 4.46
376 377 0.321564 TGCCACATTCAGAAGGTCCG 60.322 55.000 0.00 0.00 0.00 4.79
377 378 0.036388 GCCACATTCAGAAGGTCCGA 60.036 55.000 0.00 0.00 0.00 4.55
378 379 1.407437 GCCACATTCAGAAGGTCCGAT 60.407 52.381 0.00 0.00 0.00 4.18
379 380 2.555199 CCACATTCAGAAGGTCCGATC 58.445 52.381 0.00 0.00 0.00 3.69
380 381 2.093500 CCACATTCAGAAGGTCCGATCA 60.093 50.000 0.00 0.00 0.00 2.92
381 382 3.432749 CCACATTCAGAAGGTCCGATCAT 60.433 47.826 0.00 0.00 0.00 2.45
382 383 3.806521 CACATTCAGAAGGTCCGATCATC 59.193 47.826 0.00 0.00 0.00 2.92
383 384 2.871182 TTCAGAAGGTCCGATCATCG 57.129 50.000 0.00 0.00 40.07 3.84
384 385 1.763968 TCAGAAGGTCCGATCATCGT 58.236 50.000 6.25 0.00 38.40 3.73
385 386 1.405463 TCAGAAGGTCCGATCATCGTG 59.595 52.381 6.25 0.00 38.40 4.35
386 387 0.103208 AGAAGGTCCGATCATCGTGC 59.897 55.000 6.25 0.00 38.40 5.34
387 388 0.179111 GAAGGTCCGATCATCGTGCA 60.179 55.000 6.25 0.00 38.40 4.57
388 389 0.179100 AAGGTCCGATCATCGTGCAG 60.179 55.000 6.25 0.00 38.40 4.41
389 390 1.037579 AGGTCCGATCATCGTGCAGA 61.038 55.000 6.25 0.00 38.40 4.26
390 391 0.872021 GGTCCGATCATCGTGCAGAC 60.872 60.000 6.25 5.99 38.40 3.51
391 392 0.872021 GTCCGATCATCGTGCAGACC 60.872 60.000 6.25 0.00 38.40 3.85
392 393 1.946156 CCGATCATCGTGCAGACCG 60.946 63.158 6.25 0.00 38.40 4.79
393 394 1.064134 CGATCATCGTGCAGACCGA 59.936 57.895 0.00 0.02 38.89 4.69
394 395 0.318191 CGATCATCGTGCAGACCGAT 60.318 55.000 4.98 4.98 45.31 4.18
395 396 1.858091 GATCATCGTGCAGACCGATT 58.142 50.000 7.87 0.00 42.75 3.34
396 397 1.789464 GATCATCGTGCAGACCGATTC 59.211 52.381 7.87 1.89 42.75 2.52
397 398 0.817654 TCATCGTGCAGACCGATTCT 59.182 50.000 7.87 0.00 42.75 2.40
398 399 1.204704 TCATCGTGCAGACCGATTCTT 59.795 47.619 7.87 0.00 42.75 2.52
399 400 1.590238 CATCGTGCAGACCGATTCTTC 59.410 52.381 7.87 0.00 42.75 2.87
400 401 0.601057 TCGTGCAGACCGATTCTTCA 59.399 50.000 0.00 0.00 28.96 3.02
401 402 1.000394 TCGTGCAGACCGATTCTTCAA 60.000 47.619 0.00 0.00 28.36 2.69
402 403 1.126846 CGTGCAGACCGATTCTTCAAC 59.873 52.381 0.00 0.00 28.36 3.18
403 404 2.143122 GTGCAGACCGATTCTTCAACA 58.857 47.619 0.00 0.00 28.36 3.33
404 405 2.548057 GTGCAGACCGATTCTTCAACAA 59.452 45.455 0.00 0.00 28.36 2.83
405 406 2.548057 TGCAGACCGATTCTTCAACAAC 59.452 45.455 0.00 0.00 28.96 3.32
406 407 2.548057 GCAGACCGATTCTTCAACAACA 59.452 45.455 0.00 0.00 28.96 3.33
407 408 3.607078 GCAGACCGATTCTTCAACAACAC 60.607 47.826 0.00 0.00 28.96 3.32
408 409 3.809832 CAGACCGATTCTTCAACAACACT 59.190 43.478 0.00 0.00 28.96 3.55
409 410 4.273480 CAGACCGATTCTTCAACAACACTT 59.727 41.667 0.00 0.00 28.96 3.16
410 411 5.465390 CAGACCGATTCTTCAACAACACTTA 59.535 40.000 0.00 0.00 28.96 2.24
411 412 5.465724 AGACCGATTCTTCAACAACACTTAC 59.534 40.000 0.00 0.00 0.00 2.34
412 413 5.365619 ACCGATTCTTCAACAACACTTACT 58.634 37.500 0.00 0.00 0.00 2.24
413 414 5.820947 ACCGATTCTTCAACAACACTTACTT 59.179 36.000 0.00 0.00 0.00 2.24
414 415 6.018180 ACCGATTCTTCAACAACACTTACTTC 60.018 38.462 0.00 0.00 0.00 3.01
415 416 6.018262 CCGATTCTTCAACAACACTTACTTCA 60.018 38.462 0.00 0.00 0.00 3.02
416 417 6.846283 CGATTCTTCAACAACACTTACTTCAC 59.154 38.462 0.00 0.00 0.00 3.18
417 418 7.254455 CGATTCTTCAACAACACTTACTTCACT 60.254 37.037 0.00 0.00 0.00 3.41
418 419 6.903883 TCTTCAACAACACTTACTTCACTC 57.096 37.500 0.00 0.00 0.00 3.51
419 420 6.403049 TCTTCAACAACACTTACTTCACTCA 58.597 36.000 0.00 0.00 0.00 3.41
420 421 6.312918 TCTTCAACAACACTTACTTCACTCAC 59.687 38.462 0.00 0.00 0.00 3.51
421 422 5.483811 TCAACAACACTTACTTCACTCACA 58.516 37.500 0.00 0.00 0.00 3.58
422 423 5.935206 TCAACAACACTTACTTCACTCACAA 59.065 36.000 0.00 0.00 0.00 3.33
423 424 6.092122 TCAACAACACTTACTTCACTCACAAG 59.908 38.462 0.00 0.00 0.00 3.16
424 425 4.332819 ACAACACTTACTTCACTCACAAGC 59.667 41.667 0.00 0.00 0.00 4.01
425 426 3.123804 ACACTTACTTCACTCACAAGCG 58.876 45.455 0.00 0.00 0.00 4.68
426 427 3.181479 ACACTTACTTCACTCACAAGCGA 60.181 43.478 0.00 0.00 0.00 4.93
427 428 3.990469 CACTTACTTCACTCACAAGCGAT 59.010 43.478 0.00 0.00 0.00 4.58
428 429 5.161358 CACTTACTTCACTCACAAGCGATA 58.839 41.667 0.00 0.00 0.00 2.92
429 430 5.287274 CACTTACTTCACTCACAAGCGATAG 59.713 44.000 0.00 0.00 0.00 2.08
442 443 3.782884 CGATAGCCTGGATCACTCG 57.217 57.895 0.00 0.00 0.00 4.18
443 444 0.242286 CGATAGCCTGGATCACTCGG 59.758 60.000 0.00 0.00 0.00 4.63
444 445 0.037790 GATAGCCTGGATCACTCGGC 60.038 60.000 0.00 0.17 42.79 5.54
445 446 1.810606 ATAGCCTGGATCACTCGGCG 61.811 60.000 0.00 0.00 46.85 6.46
446 447 4.148825 GCCTGGATCACTCGGCGT 62.149 66.667 6.85 0.00 32.22 5.68
447 448 2.782222 GCCTGGATCACTCGGCGTA 61.782 63.158 6.85 0.00 32.22 4.42
448 449 2.041976 CCTGGATCACTCGGCGTAT 58.958 57.895 6.85 0.00 0.00 3.06
449 450 0.319040 CCTGGATCACTCGGCGTATG 60.319 60.000 6.85 6.81 0.00 2.39
450 451 0.319040 CTGGATCACTCGGCGTATGG 60.319 60.000 6.85 0.00 0.00 2.74
451 452 1.040893 TGGATCACTCGGCGTATGGT 61.041 55.000 6.85 2.17 0.00 3.55
452 453 0.318784 GGATCACTCGGCGTATGGTC 60.319 60.000 15.02 15.02 0.00 4.02
453 454 0.384309 GATCACTCGGCGTATGGTCA 59.616 55.000 17.38 0.00 0.00 4.02
454 455 1.000163 GATCACTCGGCGTATGGTCAT 60.000 52.381 17.38 2.34 0.00 3.06
455 456 0.384309 TCACTCGGCGTATGGTCATC 59.616 55.000 6.85 0.00 0.00 2.92
456 457 0.385751 CACTCGGCGTATGGTCATCT 59.614 55.000 6.85 0.00 0.00 2.90
457 458 1.112113 ACTCGGCGTATGGTCATCTT 58.888 50.000 6.85 0.00 0.00 2.40
458 459 1.202417 ACTCGGCGTATGGTCATCTTG 60.202 52.381 6.85 0.00 0.00 3.02
459 460 0.821517 TCGGCGTATGGTCATCTTGT 59.178 50.000 6.85 0.00 0.00 3.16
460 461 1.206132 TCGGCGTATGGTCATCTTGTT 59.794 47.619 6.85 0.00 0.00 2.83
461 462 2.427812 TCGGCGTATGGTCATCTTGTTA 59.572 45.455 6.85 0.00 0.00 2.41
462 463 3.119065 TCGGCGTATGGTCATCTTGTTAA 60.119 43.478 6.85 0.00 0.00 2.01
463 464 3.807622 CGGCGTATGGTCATCTTGTTAAT 59.192 43.478 0.00 0.00 0.00 1.40
464 465 4.318760 CGGCGTATGGTCATCTTGTTAATG 60.319 45.833 0.00 0.00 0.00 1.90
465 466 4.024048 GGCGTATGGTCATCTTGTTAATGG 60.024 45.833 0.00 0.00 0.00 3.16
466 467 4.814234 GCGTATGGTCATCTTGTTAATGGA 59.186 41.667 0.00 0.00 0.00 3.41
467 468 5.295787 GCGTATGGTCATCTTGTTAATGGAA 59.704 40.000 0.00 0.00 0.00 3.53
468 469 6.017109 GCGTATGGTCATCTTGTTAATGGAAT 60.017 38.462 0.00 0.00 0.00 3.01
469 470 7.468631 GCGTATGGTCATCTTGTTAATGGAATT 60.469 37.037 0.00 0.00 41.28 2.17
470 471 9.051679 CGTATGGTCATCTTGTTAATGGAATTA 57.948 33.333 0.00 0.00 37.87 1.40
492 493 9.753674 AATTAAACACTTGATGAAAGATAGGGA 57.246 29.630 0.00 0.00 39.38 4.20
493 494 8.792830 TTAAACACTTGATGAAAGATAGGGAG 57.207 34.615 0.00 0.00 39.38 4.30
494 495 6.380079 AACACTTGATGAAAGATAGGGAGT 57.620 37.500 0.00 0.00 39.38 3.85
495 496 6.380079 ACACTTGATGAAAGATAGGGAGTT 57.620 37.500 0.00 0.00 39.38 3.01
496 497 6.784031 ACACTTGATGAAAGATAGGGAGTTT 58.216 36.000 0.00 0.00 39.38 2.66
497 498 7.918076 ACACTTGATGAAAGATAGGGAGTTTA 58.082 34.615 0.00 0.00 39.38 2.01
498 499 8.552296 ACACTTGATGAAAGATAGGGAGTTTAT 58.448 33.333 0.00 0.00 39.38 1.40
499 500 9.401058 CACTTGATGAAAGATAGGGAGTTTATT 57.599 33.333 0.00 0.00 39.38 1.40
500 501 9.620259 ACTTGATGAAAGATAGGGAGTTTATTC 57.380 33.333 0.00 0.00 39.38 1.75
501 502 8.980481 TTGATGAAAGATAGGGAGTTTATTCC 57.020 34.615 0.00 0.00 36.46 3.01
514 515 6.806751 GGAGTTTATTCCCTAGAAATTTGCC 58.193 40.000 0.00 0.00 35.09 4.52
515 516 6.451064 AGTTTATTCCCTAGAAATTTGCCG 57.549 37.500 0.00 0.00 35.09 5.69
516 517 5.949952 AGTTTATTCCCTAGAAATTTGCCGT 59.050 36.000 0.00 0.00 35.09 5.68
517 518 5.828299 TTATTCCCTAGAAATTTGCCGTG 57.172 39.130 0.00 0.00 35.09 4.94
518 519 2.871096 TCCCTAGAAATTTGCCGTGT 57.129 45.000 0.00 0.00 0.00 4.49
519 520 2.432444 TCCCTAGAAATTTGCCGTGTG 58.568 47.619 0.00 0.00 0.00 3.82
520 521 1.135402 CCCTAGAAATTTGCCGTGTGC 60.135 52.381 0.00 0.00 41.77 4.57
530 531 2.263153 GCCGTGTGCAAAATAGGGT 58.737 52.632 0.00 0.00 40.77 4.34
531 532 1.455248 GCCGTGTGCAAAATAGGGTA 58.545 50.000 0.00 0.00 40.77 3.69
532 533 1.400494 GCCGTGTGCAAAATAGGGTAG 59.600 52.381 0.00 0.00 40.77 3.18
533 534 1.400494 CCGTGTGCAAAATAGGGTAGC 59.600 52.381 0.00 0.00 0.00 3.58
534 535 1.062002 CGTGTGCAAAATAGGGTAGCG 59.938 52.381 0.00 0.00 0.00 4.26
535 536 1.400494 GTGTGCAAAATAGGGTAGCGG 59.600 52.381 0.00 0.00 0.00 5.52
536 537 1.279558 TGTGCAAAATAGGGTAGCGGA 59.720 47.619 0.00 0.00 0.00 5.54
537 538 2.092646 TGTGCAAAATAGGGTAGCGGAT 60.093 45.455 0.00 0.00 0.00 4.18
538 539 2.548480 GTGCAAAATAGGGTAGCGGATC 59.452 50.000 0.00 0.00 0.00 3.36
539 540 1.798813 GCAAAATAGGGTAGCGGATCG 59.201 52.381 0.00 0.00 0.00 3.69
550 551 3.437867 CGGATCGCCTAGCTGTCT 58.562 61.111 0.00 0.00 0.00 3.41
551 552 2.630214 CGGATCGCCTAGCTGTCTA 58.370 57.895 0.00 0.00 0.00 2.59
552 553 0.238817 CGGATCGCCTAGCTGTCTAC 59.761 60.000 0.00 0.00 0.00 2.59
553 554 1.319541 GGATCGCCTAGCTGTCTACA 58.680 55.000 0.00 0.00 0.00 2.74
554 555 1.268352 GGATCGCCTAGCTGTCTACAG 59.732 57.143 5.73 5.73 46.40 2.74
555 556 2.222886 GATCGCCTAGCTGTCTACAGA 58.777 52.381 14.21 0.00 46.59 3.41
556 557 1.380524 TCGCCTAGCTGTCTACAGAC 58.619 55.000 14.21 1.03 46.59 3.51
572 573 1.512926 AGACGAACTGAATGTGGCAC 58.487 50.000 11.55 11.55 0.00 5.01
573 574 1.070758 AGACGAACTGAATGTGGCACT 59.929 47.619 19.83 0.00 0.00 4.40
574 575 1.195448 GACGAACTGAATGTGGCACTG 59.805 52.381 19.83 6.42 0.00 3.66
575 576 0.110056 CGAACTGAATGTGGCACTGC 60.110 55.000 19.83 8.47 0.00 4.40
576 577 1.242076 GAACTGAATGTGGCACTGCT 58.758 50.000 19.83 2.62 0.00 4.24
577 578 0.956633 AACTGAATGTGGCACTGCTG 59.043 50.000 19.83 13.28 0.00 4.41
578 579 0.179009 ACTGAATGTGGCACTGCTGT 60.179 50.000 19.83 13.86 0.00 4.40
579 580 1.072173 ACTGAATGTGGCACTGCTGTA 59.928 47.619 19.83 0.00 0.00 2.74
580 581 2.290514 ACTGAATGTGGCACTGCTGTAT 60.291 45.455 19.83 0.00 0.00 2.29
581 582 2.086094 TGAATGTGGCACTGCTGTATG 58.914 47.619 19.83 0.00 0.00 2.39
582 583 1.402968 GAATGTGGCACTGCTGTATGG 59.597 52.381 19.83 0.00 0.00 2.74
583 584 1.033746 ATGTGGCACTGCTGTATGGC 61.034 55.000 19.83 0.00 41.57 4.40
584 585 1.377725 GTGGCACTGCTGTATGGCT 60.378 57.895 11.13 0.00 41.74 4.75
585 586 0.107703 GTGGCACTGCTGTATGGCTA 60.108 55.000 11.13 0.00 41.74 3.93
586 587 0.107703 TGGCACTGCTGTATGGCTAC 60.108 55.000 0.00 0.00 41.74 3.58
587 588 0.107703 GGCACTGCTGTATGGCTACA 60.108 55.000 0.00 0.00 38.32 2.74
588 589 1.009829 GCACTGCTGTATGGCTACAC 58.990 55.000 0.00 0.00 34.20 2.90
589 590 1.656652 CACTGCTGTATGGCTACACC 58.343 55.000 0.00 0.00 34.20 4.16
600 601 3.060479 TGGCTACACCATTATCCTCCT 57.940 47.619 0.00 0.00 46.36 3.69
601 602 3.393687 TGGCTACACCATTATCCTCCTT 58.606 45.455 0.00 0.00 46.36 3.36
602 603 3.136443 TGGCTACACCATTATCCTCCTTG 59.864 47.826 0.00 0.00 46.36 3.61
603 604 3.136626 GGCTACACCATTATCCTCCTTGT 59.863 47.826 0.00 0.00 38.86 3.16
604 605 4.347000 GGCTACACCATTATCCTCCTTGTA 59.653 45.833 0.00 0.00 38.86 2.41
605 606 5.013183 GGCTACACCATTATCCTCCTTGTAT 59.987 44.000 0.00 0.00 38.86 2.29
606 607 6.166982 GCTACACCATTATCCTCCTTGTATC 58.833 44.000 0.00 0.00 0.00 2.24
607 608 5.215252 ACACCATTATCCTCCTTGTATCG 57.785 43.478 0.00 0.00 0.00 2.92
608 609 4.899457 ACACCATTATCCTCCTTGTATCGA 59.101 41.667 0.00 0.00 0.00 3.59
609 610 5.011125 ACACCATTATCCTCCTTGTATCGAG 59.989 44.000 0.00 0.00 0.00 4.04
610 611 4.528596 ACCATTATCCTCCTTGTATCGAGG 59.471 45.833 0.00 0.00 46.07 4.63
611 612 4.499183 CATTATCCTCCTTGTATCGAGGC 58.501 47.826 0.00 0.00 44.61 4.70
612 613 1.343069 ATCCTCCTTGTATCGAGGCC 58.657 55.000 0.00 0.00 44.61 5.19
613 614 0.759436 TCCTCCTTGTATCGAGGCCC 60.759 60.000 0.00 0.00 44.61 5.80
614 615 0.760945 CCTCCTTGTATCGAGGCCCT 60.761 60.000 0.00 0.00 39.36 5.19
615 616 1.123928 CTCCTTGTATCGAGGCCCTT 58.876 55.000 0.00 0.00 35.08 3.95
616 617 1.486726 CTCCTTGTATCGAGGCCCTTT 59.513 52.381 0.00 0.00 35.08 3.11
617 618 1.913419 TCCTTGTATCGAGGCCCTTTT 59.087 47.619 0.00 0.00 35.08 2.27
618 619 2.017049 CCTTGTATCGAGGCCCTTTTG 58.983 52.381 0.00 0.00 0.00 2.44
619 620 1.401905 CTTGTATCGAGGCCCTTTTGC 59.598 52.381 0.00 0.00 0.00 3.68
628 629 2.429927 GCCCTTTTGCCACTTGAGT 58.570 52.632 0.00 0.00 0.00 3.41
629 630 0.032540 GCCCTTTTGCCACTTGAGTG 59.967 55.000 4.15 4.15 45.23 3.51
630 631 1.402787 CCCTTTTGCCACTTGAGTGT 58.597 50.000 10.03 0.00 44.21 3.55
631 632 2.582052 CCCTTTTGCCACTTGAGTGTA 58.418 47.619 10.03 0.00 44.21 2.90
632 633 2.955660 CCCTTTTGCCACTTGAGTGTAA 59.044 45.455 10.03 2.90 44.21 2.41
633 634 3.243401 CCCTTTTGCCACTTGAGTGTAAC 60.243 47.826 10.03 0.80 44.21 2.50
634 635 3.243401 CCTTTTGCCACTTGAGTGTAACC 60.243 47.826 10.03 0.00 44.21 2.85
635 636 1.975660 TTGCCACTTGAGTGTAACCC 58.024 50.000 10.03 0.00 44.21 4.11
636 637 1.136828 TGCCACTTGAGTGTAACCCT 58.863 50.000 10.03 0.00 44.21 4.34
637 638 2.331166 TGCCACTTGAGTGTAACCCTA 58.669 47.619 10.03 0.00 44.21 3.53
638 639 2.910319 TGCCACTTGAGTGTAACCCTAT 59.090 45.455 10.03 0.00 44.21 2.57
639 640 3.055385 TGCCACTTGAGTGTAACCCTATC 60.055 47.826 10.03 0.00 44.21 2.08
640 641 3.055385 GCCACTTGAGTGTAACCCTATCA 60.055 47.826 10.03 0.00 44.21 2.15
641 642 4.384208 GCCACTTGAGTGTAACCCTATCAT 60.384 45.833 10.03 0.00 44.21 2.45
642 643 5.745227 CCACTTGAGTGTAACCCTATCATT 58.255 41.667 10.03 0.00 44.21 2.57
643 644 6.631766 GCCACTTGAGTGTAACCCTATCATTA 60.632 42.308 10.03 0.00 44.21 1.90
644 645 7.509546 CCACTTGAGTGTAACCCTATCATTAT 58.490 38.462 10.03 0.00 44.21 1.28
645 646 7.442364 CCACTTGAGTGTAACCCTATCATTATG 59.558 40.741 10.03 0.00 44.21 1.90
646 647 7.987458 CACTTGAGTGTAACCCTATCATTATGT 59.013 37.037 2.98 0.00 40.96 2.29
647 648 9.209048 ACTTGAGTGTAACCCTATCATTATGTA 57.791 33.333 0.00 0.00 37.80 2.29
668 669 7.748691 TGTAATACAACTTCAGTTTTACCCC 57.251 36.000 9.01 0.00 35.83 4.95
669 670 5.952526 AATACAACTTCAGTTTTACCCCG 57.047 39.130 0.00 0.00 35.83 5.73
670 671 2.578786 ACAACTTCAGTTTTACCCCGG 58.421 47.619 0.00 0.00 35.83 5.73
671 672 2.173143 ACAACTTCAGTTTTACCCCGGA 59.827 45.455 0.73 0.00 35.83 5.14
672 673 3.215975 CAACTTCAGTTTTACCCCGGAA 58.784 45.455 0.73 0.00 35.83 4.30
673 674 3.581265 ACTTCAGTTTTACCCCGGAAA 57.419 42.857 0.73 0.00 0.00 3.13
674 675 3.900971 ACTTCAGTTTTACCCCGGAAAA 58.099 40.909 0.73 0.00 0.00 2.29
675 676 4.279982 ACTTCAGTTTTACCCCGGAAAAA 58.720 39.130 0.73 3.99 0.00 1.94
690 691 3.131850 AAAAACTCCAGGGCCTGTG 57.868 52.632 30.68 23.94 0.00 3.66
691 692 0.261696 AAAAACTCCAGGGCCTGTGT 59.738 50.000 30.68 24.56 0.00 3.72
692 693 0.261696 AAAACTCCAGGGCCTGTGTT 59.738 50.000 30.68 28.13 31.45 3.32
693 694 0.468029 AAACTCCAGGGCCTGTGTTG 60.468 55.000 29.89 20.44 30.95 3.33
694 695 2.674380 CTCCAGGGCCTGTGTTGC 60.674 66.667 30.68 0.00 0.00 4.17
695 696 3.177884 TCCAGGGCCTGTGTTGCT 61.178 61.111 30.68 0.00 0.00 3.91
696 697 2.203538 CCAGGGCCTGTGTTGCTT 60.204 61.111 30.68 0.00 0.00 3.91
697 698 2.567497 CCAGGGCCTGTGTTGCTTG 61.567 63.158 30.68 10.16 0.00 4.01
698 699 1.829533 CAGGGCCTGTGTTGCTTGT 60.830 57.895 25.74 0.00 0.00 3.16
699 700 1.076044 AGGGCCTGTGTTGCTTGTT 60.076 52.632 4.50 0.00 0.00 2.83
700 701 1.109323 AGGGCCTGTGTTGCTTGTTC 61.109 55.000 4.50 0.00 0.00 3.18
701 702 1.391157 GGGCCTGTGTTGCTTGTTCA 61.391 55.000 0.84 0.00 0.00 3.18
702 703 0.675633 GGCCTGTGTTGCTTGTTCAT 59.324 50.000 0.00 0.00 0.00 2.57
703 704 1.069049 GGCCTGTGTTGCTTGTTCATT 59.931 47.619 0.00 0.00 0.00 2.57
704 705 2.295909 GGCCTGTGTTGCTTGTTCATTA 59.704 45.455 0.00 0.00 0.00 1.90
705 706 3.056607 GGCCTGTGTTGCTTGTTCATTAT 60.057 43.478 0.00 0.00 0.00 1.28
706 707 3.922240 GCCTGTGTTGCTTGTTCATTATG 59.078 43.478 0.00 0.00 0.00 1.90
707 708 4.487948 CCTGTGTTGCTTGTTCATTATGG 58.512 43.478 0.00 0.00 0.00 2.74
708 709 4.022068 CCTGTGTTGCTTGTTCATTATGGT 60.022 41.667 0.00 0.00 0.00 3.55
709 710 5.509501 CCTGTGTTGCTTGTTCATTATGGTT 60.510 40.000 0.00 0.00 0.00 3.67
710 711 5.911752 TGTGTTGCTTGTTCATTATGGTTT 58.088 33.333 0.00 0.00 0.00 3.27
711 712 6.344500 TGTGTTGCTTGTTCATTATGGTTTT 58.656 32.000 0.00 0.00 0.00 2.43
712 713 6.820656 TGTGTTGCTTGTTCATTATGGTTTTT 59.179 30.769 0.00 0.00 0.00 1.94
713 714 7.125113 GTGTTGCTTGTTCATTATGGTTTTTG 58.875 34.615 0.00 0.00 0.00 2.44
714 715 6.259608 TGTTGCTTGTTCATTATGGTTTTTGG 59.740 34.615 0.00 0.00 0.00 3.28
715 716 4.754114 TGCTTGTTCATTATGGTTTTTGGC 59.246 37.500 0.00 0.00 0.00 4.52
716 717 4.154015 GCTTGTTCATTATGGTTTTTGGCC 59.846 41.667 0.00 0.00 0.00 5.36
717 718 5.550290 CTTGTTCATTATGGTTTTTGGCCT 58.450 37.500 3.32 0.00 0.00 5.19
718 719 5.559148 TGTTCATTATGGTTTTTGGCCTT 57.441 34.783 3.32 0.00 0.00 4.35
719 720 5.934781 TGTTCATTATGGTTTTTGGCCTTT 58.065 33.333 3.32 0.00 0.00 3.11
720 721 6.360618 TGTTCATTATGGTTTTTGGCCTTTT 58.639 32.000 3.32 0.00 0.00 2.27
721 722 6.484977 TGTTCATTATGGTTTTTGGCCTTTTC 59.515 34.615 3.32 0.00 0.00 2.29
722 723 5.233988 TCATTATGGTTTTTGGCCTTTTCG 58.766 37.500 3.32 0.00 0.00 3.46
723 724 2.542020 ATGGTTTTTGGCCTTTTCGG 57.458 45.000 3.32 0.00 0.00 4.30
724 725 1.486211 TGGTTTTTGGCCTTTTCGGA 58.514 45.000 3.32 0.00 33.16 4.55
725 726 1.831736 TGGTTTTTGGCCTTTTCGGAA 59.168 42.857 3.32 0.00 33.16 4.30
726 727 2.236395 TGGTTTTTGGCCTTTTCGGAAA 59.764 40.909 3.32 0.00 33.16 3.13
727 728 3.271729 GGTTTTTGGCCTTTTCGGAAAA 58.728 40.909 14.64 14.64 33.16 2.29
728 729 3.311322 GGTTTTTGGCCTTTTCGGAAAAG 59.689 43.478 28.16 28.16 45.78 2.27
769 770 1.063717 ACAGTGGGATAGCCATTTGGG 60.064 52.381 0.00 0.00 40.85 4.12
981 1103 6.026513 GCTAACTCGCTATATAAACCCTACG 58.973 44.000 0.00 0.00 0.00 3.51
1063 1194 2.202810 GCGCCTTCCTCTTCCTCG 60.203 66.667 0.00 0.00 0.00 4.63
1080 1211 2.127232 GCGCTCTTGTGTTTCGCC 60.127 61.111 0.00 0.00 39.91 5.54
1713 1933 3.637273 GGTGGCGGTGAAGGAGGT 61.637 66.667 0.00 0.00 0.00 3.85
1888 2122 3.678056 TGTGGAACATGTAGGTCAGAC 57.322 47.619 0.00 0.00 45.67 3.51
1889 2123 2.029380 TGTGGAACATGTAGGTCAGACG 60.029 50.000 0.00 0.00 45.67 4.18
1890 2124 2.029290 GTGGAACATGTAGGTCAGACGT 60.029 50.000 0.00 0.58 44.52 4.34
1920 2154 6.685527 CGCAGGAGTATGATCTAAGCTATA 57.314 41.667 0.00 0.00 0.00 1.31
1932 2170 7.084486 TGATCTAAGCTATATGTGTGTAAGCG 58.916 38.462 0.00 0.00 0.00 4.68
1948 2186 8.547894 GTGTGTAAGCGTTGATGAATAATATGA 58.452 33.333 0.00 0.00 0.00 2.15
1952 2190 7.664082 AAGCGTTGATGAATAATATGAGAGG 57.336 36.000 0.00 0.00 0.00 3.69
1963 2209 7.510685 TGAATAATATGAGAGGACCTAGTGCTT 59.489 37.037 0.00 0.00 33.56 3.91
2035 2288 3.181510 ACTCGATTCGCTTAAACCATTGC 60.182 43.478 0.00 0.00 0.00 3.56
2090 2343 0.545787 TCGCCCCACCTTCTTCCTTA 60.546 55.000 0.00 0.00 0.00 2.69
2173 2480 3.895656 CGAACATCCCTCTATACCCTTCA 59.104 47.826 0.00 0.00 0.00 3.02
2230 2537 0.393077 CACCTGAACCGTCAACCTCT 59.607 55.000 0.00 0.00 31.88 3.69
2236 2543 1.407656 AACCGTCAACCTCTGCCTCA 61.408 55.000 0.00 0.00 0.00 3.86
2254 2579 3.855255 TCACCTCCATTTGTGAGACAA 57.145 42.857 0.00 0.00 36.62 3.18
2255 2580 3.476552 TCACCTCCATTTGTGAGACAAC 58.523 45.455 0.00 0.00 37.90 3.32
2284 2609 2.347490 GCTCCGGCTTGTTCCTGA 59.653 61.111 0.00 0.00 35.22 3.86
2299 2631 1.536073 CCTGACGAGCCCTCAACAGA 61.536 60.000 15.37 0.00 35.77 3.41
2324 2665 2.758327 CGTCCCCATCTCCGGTCA 60.758 66.667 0.00 0.00 0.00 4.02
2325 2666 2.786495 CGTCCCCATCTCCGGTCAG 61.786 68.421 0.00 0.00 0.00 3.51
2327 2668 1.685765 TCCCCATCTCCGGTCAGTG 60.686 63.158 0.00 0.00 0.00 3.66
2328 2669 2.187946 CCCATCTCCGGTCAGTGC 59.812 66.667 0.00 0.00 0.00 4.40
2329 2670 2.362369 CCCATCTCCGGTCAGTGCT 61.362 63.158 0.00 0.00 0.00 4.40
2330 2671 1.153489 CCATCTCCGGTCAGTGCTG 60.153 63.158 0.00 0.00 0.00 4.41
2331 2672 1.812922 CATCTCCGGTCAGTGCTGC 60.813 63.158 0.00 0.00 0.00 5.25
2332 2673 3.023949 ATCTCCGGTCAGTGCTGCC 62.024 63.158 0.00 0.00 0.00 4.85
2336 2677 2.345244 CGGTCAGTGCTGCCTCTT 59.655 61.111 0.00 0.00 0.00 2.85
2397 2739 6.611381 TCCAGAAAAACGATGATTAGCAAAG 58.389 36.000 0.00 0.00 0.00 2.77
2406 2748 4.213270 CGATGATTAGCAAAGCCGGAATAA 59.787 41.667 5.05 0.00 0.00 1.40
2416 2762 5.449862 GCAAAGCCGGAATAATGTTGATGTA 60.450 40.000 5.05 0.00 0.00 2.29
2431 2777 9.846248 AATGTTGATGTACTTAATTTCTTGCTC 57.154 29.630 0.00 0.00 0.00 4.26
2441 2787 6.944862 ACTTAATTTCTTGCTCTCCAACTCAT 59.055 34.615 0.00 0.00 0.00 2.90
2444 2790 7.951347 AATTTCTTGCTCTCCAACTCATAAT 57.049 32.000 0.00 0.00 0.00 1.28
2447 2793 9.638176 ATTTCTTGCTCTCCAACTCATAATTAT 57.362 29.630 0.00 0.00 0.00 1.28
2448 2794 9.466497 TTTCTTGCTCTCCAACTCATAATTATT 57.534 29.630 0.00 0.00 0.00 1.40
2496 2843 6.299141 TGGATATGTAGATTCCTGCCTTTTC 58.701 40.000 0.00 0.00 0.00 2.29
2498 2845 6.652900 GGATATGTAGATTCCTGCCTTTTCTC 59.347 42.308 0.00 0.00 0.00 2.87
2500 2847 5.505181 TGTAGATTCCTGCCTTTTCTCTT 57.495 39.130 0.00 0.00 0.00 2.85
2501 2848 5.880901 TGTAGATTCCTGCCTTTTCTCTTT 58.119 37.500 0.00 0.00 0.00 2.52
2502 2849 6.306987 TGTAGATTCCTGCCTTTTCTCTTTT 58.693 36.000 0.00 0.00 0.00 2.27
2503 2850 6.777580 TGTAGATTCCTGCCTTTTCTCTTTTT 59.222 34.615 0.00 0.00 0.00 1.94
2504 2851 7.942341 TGTAGATTCCTGCCTTTTCTCTTTTTA 59.058 33.333 0.00 0.00 0.00 1.52
2508 2855 9.494271 GATTCCTGCCTTTTCTCTTTTTATTTT 57.506 29.630 0.00 0.00 0.00 1.82
2530 2880 3.585862 TGAAAGCTGCCTAGTTAGTTCG 58.414 45.455 0.00 0.00 0.00 3.95
2708 3103 2.203070 ATGTCTTGGATCGGGCGC 60.203 61.111 0.00 0.00 0.00 6.53
2773 3168 2.058798 CTGCCGTATTATGTAGCGTGG 58.941 52.381 0.00 0.00 0.00 4.94
2781 3176 2.595124 TATGTAGCGTGGGTCATGTG 57.405 50.000 0.00 0.00 0.00 3.21
2782 3177 0.901827 ATGTAGCGTGGGTCATGTGA 59.098 50.000 0.00 0.00 0.00 3.58
2783 3178 0.901827 TGTAGCGTGGGTCATGTGAT 59.098 50.000 0.00 0.00 0.00 3.06
2784 3179 1.277842 TGTAGCGTGGGTCATGTGATT 59.722 47.619 0.00 0.00 0.00 2.57
2785 3180 1.665679 GTAGCGTGGGTCATGTGATTG 59.334 52.381 0.00 0.00 0.00 2.67
2786 3181 0.036732 AGCGTGGGTCATGTGATTGT 59.963 50.000 0.00 0.00 0.00 2.71
2844 3242 0.846015 CAGGCCCTGGGACATTGATA 59.154 55.000 23.47 0.00 38.20 2.15
2848 3246 1.986882 CCCTGGGACATTGATAAGCC 58.013 55.000 7.01 0.00 38.20 4.35
2867 3265 2.452813 CCGTGTAGCCGTGCATGTC 61.453 63.158 4.96 0.00 0.00 3.06
2908 3306 7.368480 TCTAGGTTTAGAAATACGGTTTTGC 57.632 36.000 0.00 0.00 33.01 3.68
2920 3318 4.749245 ACGGTTTTGCTAATTCTCAGTG 57.251 40.909 0.00 0.00 0.00 3.66
2943 3341 4.395231 GGAGATTAGCCGTGTTTTAAGCTT 59.605 41.667 3.48 3.48 36.79 3.74
2945 3343 6.327279 AGATTAGCCGTGTTTTAAGCTTTT 57.673 33.333 3.20 0.00 36.79 2.27
2973 3420 2.474410 GGGATTATACCCGGCTTCTG 57.526 55.000 0.00 0.00 40.49 3.02
2974 3421 1.610886 GGGATTATACCCGGCTTCTGC 60.611 57.143 0.00 0.00 40.49 4.26
2975 3422 1.071699 GGATTATACCCGGCTTCTGCA 59.928 52.381 0.00 0.00 41.91 4.41
2977 3424 2.543777 TTATACCCGGCTTCTGCATC 57.456 50.000 0.00 0.00 41.91 3.91
2978 3425 1.419381 TATACCCGGCTTCTGCATCA 58.581 50.000 0.00 0.00 41.91 3.07
2979 3426 0.107456 ATACCCGGCTTCTGCATCAG 59.893 55.000 0.00 0.00 41.91 2.90
2981 3428 1.078214 CCCGGCTTCTGCATCAGAA 60.078 57.895 8.72 8.72 46.50 3.02
2982 3429 1.372087 CCCGGCTTCTGCATCAGAAC 61.372 60.000 0.00 3.73 44.27 3.01
2983 3430 1.699656 CCGGCTTCTGCATCAGAACG 61.700 60.000 5.25 8.39 44.27 3.95
2984 3431 0.737367 CGGCTTCTGCATCAGAACGA 60.737 55.000 11.63 0.00 44.27 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 1.925455 CTGGACATGGACCTGGGGT 60.925 63.158 11.44 0.00 39.44 4.95
53 54 3.001514 CTGGACATGGACCTGGGG 58.998 66.667 11.44 0.00 0.00 4.96
69 70 1.490574 GGTGTAGGTCAGATCTGGCT 58.509 55.000 25.69 14.51 35.13 4.75
123 124 2.026014 CGTTTGGTGGCAGTGTGC 59.974 61.111 0.00 0.00 44.08 4.57
127 128 2.113139 CTCCCGTTTGGTGGCAGT 59.887 61.111 0.00 0.00 34.77 4.40
132 133 2.268076 CCTTGCCTCCCGTTTGGTG 61.268 63.158 0.00 0.00 34.77 4.17
133 134 1.789576 ATCCTTGCCTCCCGTTTGGT 61.790 55.000 0.00 0.00 34.77 3.67
134 135 1.000896 ATCCTTGCCTCCCGTTTGG 60.001 57.895 0.00 0.00 0.00 3.28
135 136 1.937546 GCATCCTTGCCTCCCGTTTG 61.938 60.000 0.00 0.00 43.38 2.93
136 137 1.678970 GCATCCTTGCCTCCCGTTT 60.679 57.895 0.00 0.00 43.38 3.60
137 138 2.044946 GCATCCTTGCCTCCCGTT 60.045 61.111 0.00 0.00 43.38 4.44
154 155 4.742201 CAGGAGTGGCCACGACGG 62.742 72.222 29.68 21.80 40.02 4.79
155 156 4.742201 CCAGGAGTGGCCACGACG 62.742 72.222 29.68 18.63 36.89 5.12
173 174 3.466791 ATTGAGGGATGCTCCGGCG 62.467 63.158 0.00 0.00 42.25 6.46
174 175 1.895707 CATTGAGGGATGCTCCGGC 60.896 63.158 0.00 0.00 37.43 6.13
175 176 1.228063 CCATTGAGGGATGCTCCGG 60.228 63.158 0.00 0.00 37.43 5.14
176 177 0.816825 CACCATTGAGGGATGCTCCG 60.817 60.000 0.00 0.00 43.89 4.63
177 178 0.257039 ACACCATTGAGGGATGCTCC 59.743 55.000 0.00 0.00 43.89 4.70
178 179 2.092968 TGTACACCATTGAGGGATGCTC 60.093 50.000 0.00 0.00 43.89 4.26
179 180 1.915489 TGTACACCATTGAGGGATGCT 59.085 47.619 0.00 0.00 43.89 3.79
180 181 2.092968 TCTGTACACCATTGAGGGATGC 60.093 50.000 0.00 0.00 43.89 3.91
181 182 3.801698 CTCTGTACACCATTGAGGGATG 58.198 50.000 0.00 0.00 43.89 3.51
182 183 2.171448 GCTCTGTACACCATTGAGGGAT 59.829 50.000 10.16 0.00 43.89 3.85
183 184 1.555075 GCTCTGTACACCATTGAGGGA 59.445 52.381 10.16 0.00 43.89 4.20
184 185 1.556911 AGCTCTGTACACCATTGAGGG 59.443 52.381 10.16 0.00 43.89 4.30
185 186 2.625737 CAGCTCTGTACACCATTGAGG 58.374 52.381 10.16 0.00 45.67 3.86
186 187 2.625737 CCAGCTCTGTACACCATTGAG 58.374 52.381 5.02 5.02 0.00 3.02
187 188 1.278985 CCCAGCTCTGTACACCATTGA 59.721 52.381 0.00 0.00 0.00 2.57
188 189 1.278985 TCCCAGCTCTGTACACCATTG 59.721 52.381 0.00 0.00 0.00 2.82
189 190 1.656587 TCCCAGCTCTGTACACCATT 58.343 50.000 0.00 0.00 0.00 3.16
190 191 1.656587 TTCCCAGCTCTGTACACCAT 58.343 50.000 0.00 0.00 0.00 3.55
191 192 1.429930 TTTCCCAGCTCTGTACACCA 58.570 50.000 0.00 0.00 0.00 4.17
192 193 2.224548 ACTTTTCCCAGCTCTGTACACC 60.225 50.000 0.00 0.00 0.00 4.16
193 194 3.127425 ACTTTTCCCAGCTCTGTACAC 57.873 47.619 0.00 0.00 0.00 2.90
194 195 5.395324 GCTATACTTTTCCCAGCTCTGTACA 60.395 44.000 0.00 0.00 0.00 2.90
195 196 5.051153 GCTATACTTTTCCCAGCTCTGTAC 58.949 45.833 0.00 0.00 0.00 2.90
196 197 4.101119 GGCTATACTTTTCCCAGCTCTGTA 59.899 45.833 0.00 0.00 32.78 2.74
197 198 3.118223 GGCTATACTTTTCCCAGCTCTGT 60.118 47.826 0.00 0.00 32.78 3.41
198 199 3.471680 GGCTATACTTTTCCCAGCTCTG 58.528 50.000 0.00 0.00 32.78 3.35
199 200 2.439880 GGGCTATACTTTTCCCAGCTCT 59.560 50.000 0.00 0.00 38.62 4.09
200 201 2.487445 GGGGCTATACTTTTCCCAGCTC 60.487 54.545 0.00 0.00 40.53 4.09
201 202 1.495148 GGGGCTATACTTTTCCCAGCT 59.505 52.381 0.00 0.00 40.53 4.24
202 203 1.495148 AGGGGCTATACTTTTCCCAGC 59.505 52.381 0.00 0.00 40.53 4.85
203 204 2.224305 CGAGGGGCTATACTTTTCCCAG 60.224 54.545 0.00 0.00 40.53 4.45
204 205 1.766496 CGAGGGGCTATACTTTTCCCA 59.234 52.381 0.00 0.00 40.53 4.37
205 206 2.044758 TCGAGGGGCTATACTTTTCCC 58.955 52.381 0.00 0.00 38.03 3.97
206 207 2.545322 CGTCGAGGGGCTATACTTTTCC 60.545 54.545 0.00 0.00 0.00 3.13
207 208 2.100418 ACGTCGAGGGGCTATACTTTTC 59.900 50.000 10.27 0.00 0.00 2.29
208 209 2.105766 ACGTCGAGGGGCTATACTTTT 58.894 47.619 10.27 0.00 0.00 2.27
209 210 1.772836 ACGTCGAGGGGCTATACTTT 58.227 50.000 10.27 0.00 0.00 2.66
210 211 2.645838 TACGTCGAGGGGCTATACTT 57.354 50.000 10.27 0.00 0.00 2.24
211 212 2.617532 GGATACGTCGAGGGGCTATACT 60.618 54.545 10.27 0.00 0.00 2.12
212 213 1.742268 GGATACGTCGAGGGGCTATAC 59.258 57.143 10.27 0.00 0.00 1.47
213 214 1.632409 AGGATACGTCGAGGGGCTATA 59.368 52.381 10.27 0.00 46.39 1.31
214 215 0.404812 AGGATACGTCGAGGGGCTAT 59.595 55.000 10.27 0.00 46.39 2.97
215 216 0.536687 CAGGATACGTCGAGGGGCTA 60.537 60.000 10.27 0.00 46.39 3.93
216 217 1.828660 CAGGATACGTCGAGGGGCT 60.829 63.158 10.27 0.00 46.39 5.19
217 218 2.728817 CAGGATACGTCGAGGGGC 59.271 66.667 10.27 0.00 46.39 5.80
218 219 2.125326 TGCAGGATACGTCGAGGGG 61.125 63.158 10.27 0.00 46.39 4.79
219 220 1.065928 GTGCAGGATACGTCGAGGG 59.934 63.158 10.27 0.00 46.39 4.30
220 221 0.525668 GTGTGCAGGATACGTCGAGG 60.526 60.000 3.03 3.03 46.39 4.63
221 222 0.170339 TGTGTGCAGGATACGTCGAG 59.830 55.000 0.00 0.00 46.39 4.04
222 223 0.599060 TTGTGTGCAGGATACGTCGA 59.401 50.000 0.00 0.00 46.39 4.20
223 224 1.424403 TTTGTGTGCAGGATACGTCG 58.576 50.000 0.00 0.00 46.39 5.12
224 225 3.262420 AGATTTGTGTGCAGGATACGTC 58.738 45.455 0.00 0.00 46.39 4.34
225 226 3.334583 AGATTTGTGTGCAGGATACGT 57.665 42.857 0.00 0.00 46.39 3.57
226 227 3.246226 GCTAGATTTGTGTGCAGGATACG 59.754 47.826 0.00 0.00 46.39 3.06
227 228 4.446371 AGCTAGATTTGTGTGCAGGATAC 58.554 43.478 0.00 0.00 0.00 2.24
228 229 4.760530 AGCTAGATTTGTGTGCAGGATA 57.239 40.909 0.00 0.00 0.00 2.59
229 230 3.641434 AGCTAGATTTGTGTGCAGGAT 57.359 42.857 0.00 0.00 0.00 3.24
230 231 3.076621 CAAGCTAGATTTGTGTGCAGGA 58.923 45.455 0.00 0.00 0.00 3.86
231 232 2.163010 CCAAGCTAGATTTGTGTGCAGG 59.837 50.000 0.00 0.00 0.00 4.85
232 233 3.076621 TCCAAGCTAGATTTGTGTGCAG 58.923 45.455 0.00 0.00 0.00 4.41
233 234 3.076621 CTCCAAGCTAGATTTGTGTGCA 58.923 45.455 0.00 0.00 0.00 4.57
234 235 3.338249 TCTCCAAGCTAGATTTGTGTGC 58.662 45.455 0.00 0.00 0.00 4.57
235 236 3.937706 CCTCTCCAAGCTAGATTTGTGTG 59.062 47.826 0.00 0.00 0.00 3.82
236 237 3.054802 CCCTCTCCAAGCTAGATTTGTGT 60.055 47.826 0.00 0.00 0.00 3.72
237 238 3.198635 TCCCTCTCCAAGCTAGATTTGTG 59.801 47.826 0.00 0.00 0.00 3.33
238 239 3.454082 CTCCCTCTCCAAGCTAGATTTGT 59.546 47.826 0.00 0.00 0.00 2.83
239 240 3.181456 CCTCCCTCTCCAAGCTAGATTTG 60.181 52.174 0.00 0.00 0.00 2.32
240 241 3.044894 CCTCCCTCTCCAAGCTAGATTT 58.955 50.000 0.00 0.00 0.00 2.17
241 242 2.688477 CCTCCCTCTCCAAGCTAGATT 58.312 52.381 0.00 0.00 0.00 2.40
242 243 1.132881 CCCTCCCTCTCCAAGCTAGAT 60.133 57.143 0.00 0.00 0.00 1.98
243 244 0.263172 CCCTCCCTCTCCAAGCTAGA 59.737 60.000 0.00 0.00 0.00 2.43
244 245 0.263172 TCCCTCCCTCTCCAAGCTAG 59.737 60.000 0.00 0.00 0.00 3.42
245 246 0.716591 TTCCCTCCCTCTCCAAGCTA 59.283 55.000 0.00 0.00 0.00 3.32
246 247 0.178861 TTTCCCTCCCTCTCCAAGCT 60.179 55.000 0.00 0.00 0.00 3.74
247 248 0.034960 GTTTCCCTCCCTCTCCAAGC 60.035 60.000 0.00 0.00 0.00 4.01
248 249 0.621082 GGTTTCCCTCCCTCTCCAAG 59.379 60.000 0.00 0.00 0.00 3.61
249 250 0.104144 TGGTTTCCCTCCCTCTCCAA 60.104 55.000 0.00 0.00 0.00 3.53
250 251 0.840722 GTGGTTTCCCTCCCTCTCCA 60.841 60.000 0.00 0.00 0.00 3.86
251 252 1.563577 GGTGGTTTCCCTCCCTCTCC 61.564 65.000 0.00 0.00 38.28 3.71
252 253 0.547954 AGGTGGTTTCCCTCCCTCTC 60.548 60.000 0.00 0.00 44.16 3.20
253 254 0.547954 GAGGTGGTTTCCCTCCCTCT 60.548 60.000 9.44 0.00 44.16 3.69
254 255 0.840722 TGAGGTGGTTTCCCTCCCTC 60.841 60.000 4.12 9.67 46.64 4.30
255 256 0.178831 ATGAGGTGGTTTCCCTCCCT 60.179 55.000 4.12 0.00 46.64 4.20
256 257 1.490910 CTATGAGGTGGTTTCCCTCCC 59.509 57.143 4.12 0.00 46.64 4.30
257 258 2.170817 GACTATGAGGTGGTTTCCCTCC 59.829 54.545 4.12 0.00 46.64 4.30
259 260 2.197465 GGACTATGAGGTGGTTTCCCT 58.803 52.381 0.00 0.00 34.11 4.20
260 261 1.134491 CGGACTATGAGGTGGTTTCCC 60.134 57.143 0.00 0.00 0.00 3.97
261 262 1.742750 GCGGACTATGAGGTGGTTTCC 60.743 57.143 0.00 0.00 0.00 3.13
262 263 1.207329 AGCGGACTATGAGGTGGTTTC 59.793 52.381 0.00 0.00 0.00 2.78
263 264 1.066143 CAGCGGACTATGAGGTGGTTT 60.066 52.381 0.00 0.00 0.00 3.27
264 265 0.537188 CAGCGGACTATGAGGTGGTT 59.463 55.000 0.00 0.00 0.00 3.67
265 266 0.324368 TCAGCGGACTATGAGGTGGT 60.324 55.000 0.00 0.00 34.52 4.16
266 267 0.103208 GTCAGCGGACTATGAGGTGG 59.897 60.000 9.95 0.00 40.99 4.61
267 268 0.103208 GGTCAGCGGACTATGAGGTG 59.897 60.000 16.66 0.00 43.77 4.00
268 269 1.384989 CGGTCAGCGGACTATGAGGT 61.385 60.000 16.66 0.00 43.77 3.85
269 270 1.101635 TCGGTCAGCGGACTATGAGG 61.102 60.000 16.66 0.68 43.77 3.86
270 271 0.029567 GTCGGTCAGCGGACTATGAG 59.970 60.000 16.66 4.24 43.77 2.90
271 272 1.712018 CGTCGGTCAGCGGACTATGA 61.712 60.000 16.66 9.51 43.77 2.15
272 273 1.298413 CGTCGGTCAGCGGACTATG 60.298 63.158 16.66 7.23 43.77 2.23
273 274 3.108343 CGTCGGTCAGCGGACTAT 58.892 61.111 16.66 0.00 43.77 2.12
295 296 4.467084 TTGGGCATCTCCGGCGTC 62.467 66.667 6.01 0.00 34.94 5.19
296 297 4.778143 GTTGGGCATCTCCGGCGT 62.778 66.667 6.01 0.00 34.94 5.68
297 298 4.473520 AGTTGGGCATCTCCGGCG 62.474 66.667 0.00 0.00 34.94 6.46
298 299 2.825836 CAGTTGGGCATCTCCGGC 60.826 66.667 0.00 0.00 34.94 6.13
299 300 2.825836 GCAGTTGGGCATCTCCGG 60.826 66.667 0.00 0.00 34.94 5.14
300 301 2.825836 GGCAGTTGGGCATCTCCG 60.826 66.667 0.00 0.00 42.77 4.63
301 302 2.825836 CGGCAGTTGGGCATCTCC 60.826 66.667 0.00 0.00 43.60 3.71
302 303 2.045926 ACGGCAGTTGGGCATCTC 60.046 61.111 0.00 0.00 43.60 2.75
303 304 2.045926 GACGGCAGTTGGGCATCT 60.046 61.111 0.00 0.00 43.60 2.90
304 305 3.499737 CGACGGCAGTTGGGCATC 61.500 66.667 0.00 0.00 43.60 3.91
305 306 4.329545 ACGACGGCAGTTGGGCAT 62.330 61.111 9.17 0.00 43.60 4.40
307 308 4.980805 TCACGACGGCAGTTGGGC 62.981 66.667 9.17 0.00 35.11 5.36
308 309 3.041940 GTCACGACGGCAGTTGGG 61.042 66.667 9.17 4.52 36.48 4.12
309 310 2.279851 TGTCACGACGGCAGTTGG 60.280 61.111 9.17 0.00 36.06 3.77
310 311 2.594962 GGTGTCACGACGGCAGTTG 61.595 63.158 2.30 2.30 37.77 3.16
311 312 2.279918 GGTGTCACGACGGCAGTT 60.280 61.111 0.00 0.00 0.00 3.16
312 313 3.533105 TGGTGTCACGACGGCAGT 61.533 61.111 0.00 0.00 0.00 4.40
313 314 3.036084 GTGGTGTCACGACGGCAG 61.036 66.667 2.12 0.00 33.87 4.85
314 315 4.595538 GGTGGTGTCACGACGGCA 62.596 66.667 11.43 0.00 44.50 5.69
316 317 3.858868 CTGGGTGGTGTCACGACGG 62.859 68.421 11.43 2.00 44.50 4.79
317 318 2.355837 CTGGGTGGTGTCACGACG 60.356 66.667 11.43 0.00 44.50 5.12
318 319 1.300697 GTCTGGGTGGTGTCACGAC 60.301 63.158 9.47 9.47 44.50 4.34
319 320 2.504274 GGTCTGGGTGGTGTCACGA 61.504 63.158 0.00 0.00 44.50 4.35
320 321 2.030562 GGTCTGGGTGGTGTCACG 59.969 66.667 0.00 0.00 44.50 4.35
321 322 2.030562 CGGTCTGGGTGGTGTCAC 59.969 66.667 0.00 0.00 42.91 3.67
322 323 3.936203 GCGGTCTGGGTGGTGTCA 61.936 66.667 0.00 0.00 0.00 3.58
323 324 4.699522 GGCGGTCTGGGTGGTGTC 62.700 72.222 0.00 0.00 0.00 3.67
350 351 0.966875 TCTGAATGTGGCATGGTGGC 60.967 55.000 0.00 0.00 44.03 5.01
351 352 1.475280 CTTCTGAATGTGGCATGGTGG 59.525 52.381 0.00 0.00 0.00 4.61
352 353 1.475280 CCTTCTGAATGTGGCATGGTG 59.525 52.381 0.00 0.00 0.00 4.17
353 354 1.076024 ACCTTCTGAATGTGGCATGGT 59.924 47.619 0.00 0.00 0.00 3.55
354 355 1.747355 GACCTTCTGAATGTGGCATGG 59.253 52.381 2.98 0.00 0.00 3.66
355 356 1.747355 GGACCTTCTGAATGTGGCATG 59.253 52.381 2.98 0.00 0.00 4.06
356 357 1.679944 CGGACCTTCTGAATGTGGCAT 60.680 52.381 2.98 0.00 0.00 4.40
357 358 0.321564 CGGACCTTCTGAATGTGGCA 60.322 55.000 2.98 0.00 0.00 4.92
358 359 0.036388 TCGGACCTTCTGAATGTGGC 60.036 55.000 2.98 0.00 0.00 5.01
359 360 2.093500 TGATCGGACCTTCTGAATGTGG 60.093 50.000 2.98 0.00 35.07 4.17
360 361 3.251479 TGATCGGACCTTCTGAATGTG 57.749 47.619 2.98 0.00 35.07 3.21
361 362 3.491619 CGATGATCGGACCTTCTGAATGT 60.492 47.826 7.00 0.00 35.07 2.71
362 363 3.055591 CGATGATCGGACCTTCTGAATG 58.944 50.000 7.00 0.00 35.07 2.67
363 364 2.695666 ACGATGATCGGACCTTCTGAAT 59.304 45.455 19.82 0.00 45.59 2.57
364 365 2.100197 ACGATGATCGGACCTTCTGAA 58.900 47.619 19.82 0.00 45.59 3.02
365 366 1.405463 CACGATGATCGGACCTTCTGA 59.595 52.381 19.82 0.00 45.59 3.27
366 367 1.845266 CACGATGATCGGACCTTCTG 58.155 55.000 19.82 2.38 45.59 3.02
367 368 0.103208 GCACGATGATCGGACCTTCT 59.897 55.000 19.82 0.00 45.59 2.85
368 369 0.179111 TGCACGATGATCGGACCTTC 60.179 55.000 19.82 2.11 45.59 3.46
369 370 0.179100 CTGCACGATGATCGGACCTT 60.179 55.000 19.82 0.00 45.59 3.50
370 371 1.037579 TCTGCACGATGATCGGACCT 61.038 55.000 19.82 0.00 45.59 3.85
371 372 0.872021 GTCTGCACGATGATCGGACC 60.872 60.000 19.82 7.19 45.59 4.46
372 373 0.872021 GGTCTGCACGATGATCGGAC 60.872 60.000 19.82 15.18 45.59 4.79
373 374 1.437573 GGTCTGCACGATGATCGGA 59.562 57.895 19.82 3.58 45.59 4.55
374 375 1.946156 CGGTCTGCACGATGATCGG 60.946 63.158 19.82 9.17 45.59 4.18
375 376 1.064134 TCGGTCTGCACGATGATCG 59.936 57.895 14.01 14.01 46.93 3.69
381 382 0.601057 TGAAGAATCGGTCTGCACGA 59.399 50.000 0.02 0.02 36.94 4.35
382 383 1.126846 GTTGAAGAATCGGTCTGCACG 59.873 52.381 0.00 0.00 42.12 5.34
383 384 2.143122 TGTTGAAGAATCGGTCTGCAC 58.857 47.619 0.00 0.00 42.12 4.57
384 385 2.542020 TGTTGAAGAATCGGTCTGCA 57.458 45.000 0.00 0.00 40.52 4.41
385 386 2.548057 TGTTGTTGAAGAATCGGTCTGC 59.452 45.455 0.00 0.00 36.40 4.26
386 387 3.809832 AGTGTTGTTGAAGAATCGGTCTG 59.190 43.478 0.00 0.00 36.40 3.51
387 388 4.073293 AGTGTTGTTGAAGAATCGGTCT 57.927 40.909 0.00 0.00 38.69 3.85
388 389 4.813296 AAGTGTTGTTGAAGAATCGGTC 57.187 40.909 0.00 0.00 0.00 4.79
389 390 5.365619 AGTAAGTGTTGTTGAAGAATCGGT 58.634 37.500 0.00 0.00 0.00 4.69
390 391 5.924475 AGTAAGTGTTGTTGAAGAATCGG 57.076 39.130 0.00 0.00 0.00 4.18
391 392 6.846283 GTGAAGTAAGTGTTGTTGAAGAATCG 59.154 38.462 0.00 0.00 0.00 3.34
392 393 7.920738 AGTGAAGTAAGTGTTGTTGAAGAATC 58.079 34.615 0.00 0.00 0.00 2.52
393 394 7.552687 TGAGTGAAGTAAGTGTTGTTGAAGAAT 59.447 33.333 0.00 0.00 0.00 2.40
394 395 6.876789 TGAGTGAAGTAAGTGTTGTTGAAGAA 59.123 34.615 0.00 0.00 0.00 2.52
395 396 6.312918 GTGAGTGAAGTAAGTGTTGTTGAAGA 59.687 38.462 0.00 0.00 0.00 2.87
396 397 6.092122 TGTGAGTGAAGTAAGTGTTGTTGAAG 59.908 38.462 0.00 0.00 0.00 3.02
397 398 5.935206 TGTGAGTGAAGTAAGTGTTGTTGAA 59.065 36.000 0.00 0.00 0.00 2.69
398 399 5.483811 TGTGAGTGAAGTAAGTGTTGTTGA 58.516 37.500 0.00 0.00 0.00 3.18
399 400 5.794687 TGTGAGTGAAGTAAGTGTTGTTG 57.205 39.130 0.00 0.00 0.00 3.33
400 401 5.163754 GCTTGTGAGTGAAGTAAGTGTTGTT 60.164 40.000 0.00 0.00 0.00 2.83
401 402 4.332819 GCTTGTGAGTGAAGTAAGTGTTGT 59.667 41.667 0.00 0.00 0.00 3.32
402 403 4.550831 CGCTTGTGAGTGAAGTAAGTGTTG 60.551 45.833 0.00 0.00 35.36 3.33
403 404 3.555956 CGCTTGTGAGTGAAGTAAGTGTT 59.444 43.478 0.00 0.00 35.36 3.32
404 405 3.123804 CGCTTGTGAGTGAAGTAAGTGT 58.876 45.455 0.00 0.00 35.36 3.55
405 406 3.381045 TCGCTTGTGAGTGAAGTAAGTG 58.619 45.455 0.00 0.00 39.36 3.16
406 407 3.728076 TCGCTTGTGAGTGAAGTAAGT 57.272 42.857 0.00 0.00 39.36 2.24
407 408 4.266502 GCTATCGCTTGTGAGTGAAGTAAG 59.733 45.833 0.00 0.00 44.91 2.34
408 409 4.174009 GCTATCGCTTGTGAGTGAAGTAA 58.826 43.478 0.00 0.00 44.91 2.24
409 410 3.428999 GGCTATCGCTTGTGAGTGAAGTA 60.429 47.826 0.00 0.00 44.91 2.24
410 411 2.611518 GCTATCGCTTGTGAGTGAAGT 58.388 47.619 0.00 0.00 44.91 3.01
411 412 1.929836 GGCTATCGCTTGTGAGTGAAG 59.070 52.381 0.00 0.00 44.91 3.02
412 413 1.550524 AGGCTATCGCTTGTGAGTGAA 59.449 47.619 0.00 0.00 44.91 3.18
413 414 1.134995 CAGGCTATCGCTTGTGAGTGA 60.135 52.381 0.00 0.00 45.75 3.41
414 415 1.284657 CAGGCTATCGCTTGTGAGTG 58.715 55.000 0.00 0.00 38.33 3.51
415 416 0.176680 CCAGGCTATCGCTTGTGAGT 59.823 55.000 0.66 0.00 41.25 3.41
416 417 0.461548 TCCAGGCTATCGCTTGTGAG 59.538 55.000 0.66 0.00 41.25 3.51
417 418 1.069204 GATCCAGGCTATCGCTTGTGA 59.931 52.381 0.66 0.00 41.25 3.58
418 419 1.202568 TGATCCAGGCTATCGCTTGTG 60.203 52.381 0.66 0.00 41.25 3.33
419 420 1.123077 TGATCCAGGCTATCGCTTGT 58.877 50.000 0.66 0.00 41.25 3.16
420 421 1.069823 AGTGATCCAGGCTATCGCTTG 59.930 52.381 7.38 0.00 40.42 4.01
421 422 1.342819 GAGTGATCCAGGCTATCGCTT 59.657 52.381 13.13 0.36 42.68 4.68
422 423 0.965439 GAGTGATCCAGGCTATCGCT 59.035 55.000 12.04 12.04 44.70 4.93
423 424 0.387878 CGAGTGATCCAGGCTATCGC 60.388 60.000 3.17 3.17 34.71 4.58
424 425 0.242286 CCGAGTGATCCAGGCTATCG 59.758 60.000 0.00 0.00 0.00 2.92
425 426 0.037790 GCCGAGTGATCCAGGCTATC 60.038 60.000 9.64 0.00 45.67 2.08
426 427 1.810606 CGCCGAGTGATCCAGGCTAT 61.811 60.000 13.43 0.00 46.85 2.97
427 428 2.490148 CGCCGAGTGATCCAGGCTA 61.490 63.158 13.43 0.00 46.85 3.93
428 429 3.842923 CGCCGAGTGATCCAGGCT 61.843 66.667 13.43 0.00 46.85 4.58
429 430 2.088674 ATACGCCGAGTGATCCAGGC 62.089 60.000 0.00 7.51 45.67 4.85
430 431 0.319040 CATACGCCGAGTGATCCAGG 60.319 60.000 0.00 0.00 0.00 4.45
431 432 0.319040 CCATACGCCGAGTGATCCAG 60.319 60.000 0.00 0.00 0.00 3.86
432 433 1.040893 ACCATACGCCGAGTGATCCA 61.041 55.000 0.00 0.00 0.00 3.41
433 434 0.318784 GACCATACGCCGAGTGATCC 60.319 60.000 0.00 0.00 0.00 3.36
434 435 0.384309 TGACCATACGCCGAGTGATC 59.616 55.000 0.00 0.00 0.00 2.92
435 436 1.000163 GATGACCATACGCCGAGTGAT 60.000 52.381 0.00 0.00 0.00 3.06
436 437 0.384309 GATGACCATACGCCGAGTGA 59.616 55.000 0.00 0.00 0.00 3.41
437 438 0.385751 AGATGACCATACGCCGAGTG 59.614 55.000 0.00 0.00 0.00 3.51
438 439 1.112113 AAGATGACCATACGCCGAGT 58.888 50.000 0.00 0.00 0.00 4.18
439 440 1.202417 ACAAGATGACCATACGCCGAG 60.202 52.381 0.00 0.00 0.00 4.63
440 441 0.821517 ACAAGATGACCATACGCCGA 59.178 50.000 0.00 0.00 0.00 5.54
441 442 1.651987 AACAAGATGACCATACGCCG 58.348 50.000 0.00 0.00 0.00 6.46
442 443 4.024048 CCATTAACAAGATGACCATACGCC 60.024 45.833 0.00 0.00 0.00 5.68
443 444 4.814234 TCCATTAACAAGATGACCATACGC 59.186 41.667 0.00 0.00 0.00 4.42
444 445 6.918892 TTCCATTAACAAGATGACCATACG 57.081 37.500 0.00 0.00 0.00 3.06
448 449 9.083422 TGTTTAATTCCATTAACAAGATGACCA 57.917 29.630 0.00 0.00 34.68 4.02
449 450 9.353999 GTGTTTAATTCCATTAACAAGATGACC 57.646 33.333 0.00 0.00 34.68 4.02
466 467 9.753674 TCCCTATCTTTCATCAAGTGTTTAATT 57.246 29.630 0.00 0.00 33.66 1.40
467 468 9.401058 CTCCCTATCTTTCATCAAGTGTTTAAT 57.599 33.333 0.00 0.00 33.66 1.40
468 469 8.383175 ACTCCCTATCTTTCATCAAGTGTTTAA 58.617 33.333 0.00 0.00 33.66 1.52
469 470 7.918076 ACTCCCTATCTTTCATCAAGTGTTTA 58.082 34.615 0.00 0.00 33.66 2.01
470 471 6.784031 ACTCCCTATCTTTCATCAAGTGTTT 58.216 36.000 0.00 0.00 33.66 2.83
471 472 6.380079 ACTCCCTATCTTTCATCAAGTGTT 57.620 37.500 0.00 0.00 33.66 3.32
472 473 6.380079 AACTCCCTATCTTTCATCAAGTGT 57.620 37.500 0.00 0.00 33.66 3.55
473 474 8.970859 ATAAACTCCCTATCTTTCATCAAGTG 57.029 34.615 0.00 0.00 33.66 3.16
474 475 9.620259 GAATAAACTCCCTATCTTTCATCAAGT 57.380 33.333 0.00 0.00 33.66 3.16
475 476 9.061435 GGAATAAACTCCCTATCTTTCATCAAG 57.939 37.037 0.00 0.00 0.00 3.02
476 477 8.980481 GGAATAAACTCCCTATCTTTCATCAA 57.020 34.615 0.00 0.00 0.00 2.57
490 491 6.459710 CGGCAAATTTCTAGGGAATAAACTCC 60.460 42.308 0.00 0.00 34.41 3.85
491 492 6.095021 ACGGCAAATTTCTAGGGAATAAACTC 59.905 38.462 0.00 0.00 0.00 3.01
492 493 5.949952 ACGGCAAATTTCTAGGGAATAAACT 59.050 36.000 0.00 0.00 0.00 2.66
493 494 6.033966 CACGGCAAATTTCTAGGGAATAAAC 58.966 40.000 0.00 0.00 0.00 2.01
494 495 5.712917 ACACGGCAAATTTCTAGGGAATAAA 59.287 36.000 0.00 0.00 0.00 1.40
495 496 5.124776 CACACGGCAAATTTCTAGGGAATAA 59.875 40.000 0.00 0.00 0.00 1.40
496 497 4.638421 CACACGGCAAATTTCTAGGGAATA 59.362 41.667 0.00 0.00 0.00 1.75
497 498 3.443681 CACACGGCAAATTTCTAGGGAAT 59.556 43.478 0.00 0.00 0.00 3.01
498 499 2.817258 CACACGGCAAATTTCTAGGGAA 59.183 45.455 0.00 0.00 0.00 3.97
499 500 2.432444 CACACGGCAAATTTCTAGGGA 58.568 47.619 0.00 0.00 0.00 4.20
500 501 1.135402 GCACACGGCAAATTTCTAGGG 60.135 52.381 0.00 0.00 43.97 3.53
501 502 2.262572 GCACACGGCAAATTTCTAGG 57.737 50.000 0.00 0.00 43.97 3.02
512 513 1.400494 CTACCCTATTTTGCACACGGC 59.600 52.381 0.00 0.00 45.13 5.68
513 514 1.400494 GCTACCCTATTTTGCACACGG 59.600 52.381 0.00 0.00 0.00 4.94
514 515 1.062002 CGCTACCCTATTTTGCACACG 59.938 52.381 0.00 0.00 0.00 4.49
515 516 1.400494 CCGCTACCCTATTTTGCACAC 59.600 52.381 0.00 0.00 0.00 3.82
516 517 1.279558 TCCGCTACCCTATTTTGCACA 59.720 47.619 0.00 0.00 0.00 4.57
517 518 2.032680 TCCGCTACCCTATTTTGCAC 57.967 50.000 0.00 0.00 0.00 4.57
518 519 2.805295 CGATCCGCTACCCTATTTTGCA 60.805 50.000 0.00 0.00 0.00 4.08
519 520 1.798813 CGATCCGCTACCCTATTTTGC 59.201 52.381 0.00 0.00 0.00 3.68
533 534 0.238817 GTAGACAGCTAGGCGATCCG 59.761 60.000 0.00 0.00 37.47 4.18
534 535 1.268352 CTGTAGACAGCTAGGCGATCC 59.732 57.143 0.00 0.00 37.15 3.36
535 536 2.031508 GTCTGTAGACAGCTAGGCGATC 60.032 54.545 7.14 0.00 44.18 3.69
536 537 1.950909 GTCTGTAGACAGCTAGGCGAT 59.049 52.381 7.14 0.00 44.18 4.58
537 538 1.380524 GTCTGTAGACAGCTAGGCGA 58.619 55.000 7.14 0.00 44.18 5.54
538 539 0.028242 CGTCTGTAGACAGCTAGGCG 59.972 60.000 12.11 0.00 44.99 5.52
539 540 1.380524 TCGTCTGTAGACAGCTAGGC 58.619 55.000 12.11 0.00 44.99 3.93
540 541 3.011119 AGTTCGTCTGTAGACAGCTAGG 58.989 50.000 12.11 0.00 44.99 3.02
541 542 3.685272 TCAGTTCGTCTGTAGACAGCTAG 59.315 47.826 12.11 0.00 44.99 3.42
542 543 3.671716 TCAGTTCGTCTGTAGACAGCTA 58.328 45.455 12.11 0.00 44.99 3.32
543 544 2.505405 TCAGTTCGTCTGTAGACAGCT 58.495 47.619 12.11 4.08 44.99 4.24
544 545 2.991434 TCAGTTCGTCTGTAGACAGC 57.009 50.000 12.11 0.15 44.99 4.40
545 546 4.618912 CACATTCAGTTCGTCTGTAGACAG 59.381 45.833 12.11 3.12 44.99 3.51
546 547 4.546570 CACATTCAGTTCGTCTGTAGACA 58.453 43.478 12.11 0.00 44.99 3.41
547 548 3.921021 CCACATTCAGTTCGTCTGTAGAC 59.079 47.826 1.92 1.92 43.97 2.59
548 549 3.614150 GCCACATTCAGTTCGTCTGTAGA 60.614 47.826 9.34 0.00 43.97 2.59
549 550 2.668457 GCCACATTCAGTTCGTCTGTAG 59.332 50.000 9.34 4.94 43.97 2.74
550 551 2.036604 TGCCACATTCAGTTCGTCTGTA 59.963 45.455 9.34 2.41 43.97 2.74
551 552 1.202639 TGCCACATTCAGTTCGTCTGT 60.203 47.619 9.34 0.00 43.97 3.41
552 553 1.195448 GTGCCACATTCAGTTCGTCTG 59.805 52.381 0.00 4.52 44.85 3.51
553 554 1.070758 AGTGCCACATTCAGTTCGTCT 59.929 47.619 0.00 0.00 0.00 4.18
554 555 1.195448 CAGTGCCACATTCAGTTCGTC 59.805 52.381 0.00 0.00 0.00 4.20
555 556 1.229428 CAGTGCCACATTCAGTTCGT 58.771 50.000 0.00 0.00 0.00 3.85
556 557 0.110056 GCAGTGCCACATTCAGTTCG 60.110 55.000 2.85 0.00 0.00 3.95
557 558 1.068748 CAGCAGTGCCACATTCAGTTC 60.069 52.381 12.58 0.00 0.00 3.01
558 559 0.956633 CAGCAGTGCCACATTCAGTT 59.043 50.000 12.58 0.00 0.00 3.16
559 560 0.179009 ACAGCAGTGCCACATTCAGT 60.179 50.000 12.58 0.00 0.00 3.41
560 561 1.812235 TACAGCAGTGCCACATTCAG 58.188 50.000 12.58 0.00 0.00 3.02
561 562 2.086094 CATACAGCAGTGCCACATTCA 58.914 47.619 12.58 0.00 0.00 2.57
562 563 1.402968 CCATACAGCAGTGCCACATTC 59.597 52.381 12.58 0.00 0.00 2.67
563 564 1.466856 CCATACAGCAGTGCCACATT 58.533 50.000 12.58 0.00 0.00 2.71
564 565 1.033746 GCCATACAGCAGTGCCACAT 61.034 55.000 12.58 0.00 0.00 3.21
565 566 1.675310 GCCATACAGCAGTGCCACA 60.675 57.895 12.58 0.00 0.00 4.17
566 567 0.107703 TAGCCATACAGCAGTGCCAC 60.108 55.000 12.58 0.00 34.23 5.01
567 568 0.107703 GTAGCCATACAGCAGTGCCA 60.108 55.000 12.58 0.00 34.23 4.92
568 569 0.107703 TGTAGCCATACAGCAGTGCC 60.108 55.000 12.58 0.00 36.98 5.01
569 570 1.009829 GTGTAGCCATACAGCAGTGC 58.990 55.000 7.13 7.13 42.53 4.40
581 582 3.136626 ACAAGGAGGATAATGGTGTAGCC 59.863 47.826 0.00 0.00 37.90 3.93
582 583 4.423625 ACAAGGAGGATAATGGTGTAGC 57.576 45.455 0.00 0.00 0.00 3.58
583 584 6.208797 TCGATACAAGGAGGATAATGGTGTAG 59.791 42.308 0.00 0.00 0.00 2.74
584 585 6.072649 TCGATACAAGGAGGATAATGGTGTA 58.927 40.000 0.00 0.00 0.00 2.90
585 586 4.899457 TCGATACAAGGAGGATAATGGTGT 59.101 41.667 0.00 0.00 0.00 4.16
586 587 5.468540 TCGATACAAGGAGGATAATGGTG 57.531 43.478 0.00 0.00 0.00 4.17
587 588 5.730296 CTCGATACAAGGAGGATAATGGT 57.270 43.478 0.00 0.00 0.00 3.55
596 597 1.123928 AAGGGCCTCGATACAAGGAG 58.876 55.000 6.46 0.00 35.83 3.69
597 598 1.580059 AAAGGGCCTCGATACAAGGA 58.420 50.000 6.46 0.00 35.83 3.36
598 599 2.017049 CAAAAGGGCCTCGATACAAGG 58.983 52.381 6.46 0.00 36.95 3.61
599 600 1.401905 GCAAAAGGGCCTCGATACAAG 59.598 52.381 6.46 0.00 0.00 3.16
600 601 1.459450 GCAAAAGGGCCTCGATACAA 58.541 50.000 6.46 0.00 0.00 2.41
601 602 3.168773 GCAAAAGGGCCTCGATACA 57.831 52.632 6.46 0.00 0.00 2.29
610 611 0.032540 CACTCAAGTGGCAAAAGGGC 59.967 55.000 2.08 0.00 42.10 5.19
621 622 8.090788 ACATAATGATAGGGTTACACTCAAGT 57.909 34.615 0.00 0.00 0.00 3.16
642 643 9.452287 GGGGTAAAACTGAAGTTGTATTACATA 57.548 33.333 13.95 0.00 38.44 2.29
643 644 7.120138 CGGGGTAAAACTGAAGTTGTATTACAT 59.880 37.037 13.95 0.00 38.44 2.29
644 645 6.427547 CGGGGTAAAACTGAAGTTGTATTACA 59.572 38.462 13.95 0.00 38.44 2.41
645 646 6.128200 CCGGGGTAAAACTGAAGTTGTATTAC 60.128 42.308 0.00 2.74 38.44 1.89
646 647 5.939296 CCGGGGTAAAACTGAAGTTGTATTA 59.061 40.000 0.00 0.00 38.44 0.98
647 648 4.763279 CCGGGGTAAAACTGAAGTTGTATT 59.237 41.667 0.00 0.00 38.44 1.89
648 649 4.041938 TCCGGGGTAAAACTGAAGTTGTAT 59.958 41.667 0.00 0.00 38.44 2.29
649 650 3.390639 TCCGGGGTAAAACTGAAGTTGTA 59.609 43.478 0.00 0.00 38.44 2.41
650 651 2.173143 TCCGGGGTAAAACTGAAGTTGT 59.827 45.455 0.00 0.00 38.44 3.32
651 652 2.853705 TCCGGGGTAAAACTGAAGTTG 58.146 47.619 0.00 0.00 38.44 3.16
652 653 3.581265 TTCCGGGGTAAAACTGAAGTT 57.419 42.857 0.00 0.00 40.50 2.66
653 654 3.581265 TTTCCGGGGTAAAACTGAAGT 57.419 42.857 0.00 0.00 0.00 3.01
654 655 4.922471 TTTTTCCGGGGTAAAACTGAAG 57.078 40.909 0.00 0.00 0.00 3.02
672 673 0.261696 ACACAGGCCCTGGAGTTTTT 59.738 50.000 16.70 0.00 35.51 1.94
673 674 0.261696 AACACAGGCCCTGGAGTTTT 59.738 50.000 16.70 0.00 35.51 2.43
674 675 0.468029 CAACACAGGCCCTGGAGTTT 60.468 55.000 16.70 0.00 33.78 2.66
675 676 1.151450 CAACACAGGCCCTGGAGTT 59.849 57.895 16.70 16.01 35.41 3.01
676 677 2.839098 CAACACAGGCCCTGGAGT 59.161 61.111 16.70 10.52 35.51 3.85
677 678 2.674380 GCAACACAGGCCCTGGAG 60.674 66.667 16.70 9.82 35.51 3.86
678 679 2.766925 AAGCAACACAGGCCCTGGA 61.767 57.895 16.70 0.00 35.51 3.86
679 680 2.203538 AAGCAACACAGGCCCTGG 60.204 61.111 16.70 6.69 35.51 4.45
680 681 1.394266 AACAAGCAACACAGGCCCTG 61.394 55.000 9.83 9.83 37.52 4.45
681 682 1.076044 AACAAGCAACACAGGCCCT 60.076 52.632 0.00 0.00 0.00 5.19
682 683 1.363807 GAACAAGCAACACAGGCCC 59.636 57.895 0.00 0.00 0.00 5.80
683 684 0.675633 ATGAACAAGCAACACAGGCC 59.324 50.000 0.00 0.00 0.00 5.19
684 685 2.514205 AATGAACAAGCAACACAGGC 57.486 45.000 0.00 0.00 0.00 4.85
685 686 4.022068 ACCATAATGAACAAGCAACACAGG 60.022 41.667 0.00 0.00 0.00 4.00
686 687 5.125100 ACCATAATGAACAAGCAACACAG 57.875 39.130 0.00 0.00 0.00 3.66
687 688 5.528043 AACCATAATGAACAAGCAACACA 57.472 34.783 0.00 0.00 0.00 3.72
688 689 6.843069 AAAACCATAATGAACAAGCAACAC 57.157 33.333 0.00 0.00 0.00 3.32
689 690 6.259608 CCAAAAACCATAATGAACAAGCAACA 59.740 34.615 0.00 0.00 0.00 3.33
690 691 6.657888 CCAAAAACCATAATGAACAAGCAAC 58.342 36.000 0.00 0.00 0.00 4.17
691 692 5.238214 GCCAAAAACCATAATGAACAAGCAA 59.762 36.000 0.00 0.00 0.00 3.91
692 693 4.754114 GCCAAAAACCATAATGAACAAGCA 59.246 37.500 0.00 0.00 0.00 3.91
693 694 4.154015 GGCCAAAAACCATAATGAACAAGC 59.846 41.667 0.00 0.00 0.00 4.01
694 695 5.550290 AGGCCAAAAACCATAATGAACAAG 58.450 37.500 5.01 0.00 0.00 3.16
695 696 5.559148 AGGCCAAAAACCATAATGAACAA 57.441 34.783 5.01 0.00 0.00 2.83
696 697 5.559148 AAGGCCAAAAACCATAATGAACA 57.441 34.783 5.01 0.00 0.00 3.18
697 698 6.347321 CGAAAAGGCCAAAAACCATAATGAAC 60.347 38.462 5.01 0.00 0.00 3.18
698 699 5.698545 CGAAAAGGCCAAAAACCATAATGAA 59.301 36.000 5.01 0.00 0.00 2.57
699 700 5.233988 CGAAAAGGCCAAAAACCATAATGA 58.766 37.500 5.01 0.00 0.00 2.57
700 701 4.391523 CCGAAAAGGCCAAAAACCATAATG 59.608 41.667 5.01 0.00 0.00 1.90
701 702 4.284746 TCCGAAAAGGCCAAAAACCATAAT 59.715 37.500 5.01 0.00 40.77 1.28
702 703 3.641906 TCCGAAAAGGCCAAAAACCATAA 59.358 39.130 5.01 0.00 40.77 1.90
703 704 3.231818 TCCGAAAAGGCCAAAAACCATA 58.768 40.909 5.01 0.00 40.77 2.74
704 705 2.043227 TCCGAAAAGGCCAAAAACCAT 58.957 42.857 5.01 0.00 40.77 3.55
705 706 1.486211 TCCGAAAAGGCCAAAAACCA 58.514 45.000 5.01 0.00 40.77 3.67
706 707 2.605837 TTCCGAAAAGGCCAAAAACC 57.394 45.000 5.01 0.00 40.77 3.27
707 708 4.185394 TCTTTTCCGAAAAGGCCAAAAAC 58.815 39.130 26.19 0.00 46.11 2.43
708 709 4.473477 TCTTTTCCGAAAAGGCCAAAAA 57.527 36.364 26.19 8.69 46.11 1.94
709 710 4.473477 TTCTTTTCCGAAAAGGCCAAAA 57.527 36.364 26.19 14.27 46.11 2.44
710 711 4.473477 TTTCTTTTCCGAAAAGGCCAAA 57.527 36.364 26.19 18.62 46.11 3.28
711 712 4.473477 TTTTCTTTTCCGAAAAGGCCAA 57.527 36.364 26.19 16.74 46.11 4.52
717 718 9.209175 TGATTTTCAACTTTTCTTTTCCGAAAA 57.791 25.926 6.16 6.16 39.74 2.29
718 719 8.652463 GTGATTTTCAACTTTTCTTTTCCGAAA 58.348 29.630 0.00 0.00 0.00 3.46
719 720 8.032451 AGTGATTTTCAACTTTTCTTTTCCGAA 58.968 29.630 0.00 0.00 0.00 4.30
720 721 7.543756 AGTGATTTTCAACTTTTCTTTTCCGA 58.456 30.769 0.00 0.00 0.00 4.55
721 722 7.755582 AGTGATTTTCAACTTTTCTTTTCCG 57.244 32.000 0.00 0.00 0.00 4.30
722 723 8.321005 CGAAGTGATTTTCAACTTTTCTTTTCC 58.679 33.333 0.00 0.00 0.00 3.13
723 724 9.072294 TCGAAGTGATTTTCAACTTTTCTTTTC 57.928 29.630 0.00 0.00 0.00 2.29
724 725 8.860128 GTCGAAGTGATTTTCAACTTTTCTTTT 58.140 29.630 0.00 0.00 0.00 2.27
725 726 8.026607 TGTCGAAGTGATTTTCAACTTTTCTTT 58.973 29.630 0.00 0.00 0.00 2.52
726 727 7.535139 TGTCGAAGTGATTTTCAACTTTTCTT 58.465 30.769 0.00 0.00 0.00 2.52
727 728 7.083875 TGTCGAAGTGATTTTCAACTTTTCT 57.916 32.000 0.00 0.00 0.00 2.52
728 729 6.967199 ACTGTCGAAGTGATTTTCAACTTTTC 59.033 34.615 0.00 0.00 37.88 2.29
769 770 7.386299 GTGGTATATGAATGTCCAGTCTCATTC 59.614 40.741 9.90 9.90 45.59 2.67
981 1103 0.251354 TGAAGGGTCTCAGCATGCTC 59.749 55.000 19.68 6.38 34.76 4.26
1046 1177 2.202810 CGAGGAAGAGGAAGGCGC 60.203 66.667 0.00 0.00 0.00 6.53
1047 1178 2.202810 GCGAGGAAGAGGAAGGCG 60.203 66.667 0.00 0.00 0.00 5.52
1063 1194 2.127232 GGCGAAACACAAGAGCGC 60.127 61.111 0.00 0.00 46.20 5.92
1080 1211 1.417890 ACAGGTGAAGGGAGAAGTGTG 59.582 52.381 0.00 0.00 0.00 3.82
1186 1317 2.359975 GCCAGAACCGTCCCTTGG 60.360 66.667 0.00 0.00 0.00 3.61
1265 1396 2.875485 CGATGGTCGTGTCGGACT 59.125 61.111 9.88 0.00 37.12 3.85
1845 2079 2.238898 GTCACCCCTTACAGGCTTACAT 59.761 50.000 0.00 0.00 32.73 2.29
1885 2119 0.526662 CTCCTGCGGTTCTAACGTCT 59.473 55.000 0.00 0.00 0.00 4.18
1886 2120 0.243095 ACTCCTGCGGTTCTAACGTC 59.757 55.000 0.00 0.00 0.00 4.34
1887 2121 1.538047 TACTCCTGCGGTTCTAACGT 58.462 50.000 0.00 0.00 0.00 3.99
1888 2122 2.098607 TCATACTCCTGCGGTTCTAACG 59.901 50.000 0.00 0.00 0.00 3.18
1889 2123 3.795623 TCATACTCCTGCGGTTCTAAC 57.204 47.619 0.00 0.00 0.00 2.34
1890 2124 4.215908 AGATCATACTCCTGCGGTTCTAA 58.784 43.478 0.00 0.00 0.00 2.10
1910 2144 6.387041 ACGCTTACACACATATAGCTTAGA 57.613 37.500 0.00 0.00 0.00 2.10
1920 2154 6.735678 TTATTCATCAACGCTTACACACAT 57.264 33.333 0.00 0.00 0.00 3.21
1932 2170 9.868277 CTAGGTCCTCTCATATTATTCATCAAC 57.132 37.037 0.00 0.00 0.00 3.18
1948 2186 9.397280 GAAAATAAATTAAGCACTAGGTCCTCT 57.603 33.333 0.00 0.00 0.00 3.69
2000 2247 5.812642 AGCGAATCGAGTGATAGAACAAAAT 59.187 36.000 6.91 0.00 33.40 1.82
2005 2255 6.291690 GGTTTAAGCGAATCGAGTGATAGAAC 60.292 42.308 6.91 0.00 33.40 3.01
2173 2480 1.556911 ACTGGCATCGGAGAAGAATGT 59.443 47.619 0.00 0.00 43.58 2.71
2215 2522 1.070786 GGCAGAGGTTGACGGTTCA 59.929 57.895 0.00 0.00 0.00 3.18
2230 2537 0.770499 TCACAAATGGAGGTGAGGCA 59.230 50.000 0.00 0.00 39.00 4.75
2236 2543 3.864789 AGTTGTCTCACAAATGGAGGT 57.135 42.857 0.00 0.00 40.15 3.85
2255 2580 2.248724 CGGAGCCGACGACGATAG 59.751 66.667 9.28 0.00 42.83 2.08
2284 2609 1.867919 CGTCTCTGTTGAGGGCTCGT 61.868 60.000 0.00 0.00 40.58 4.18
2314 2646 2.581354 GCAGCACTGACCGGAGAT 59.419 61.111 9.46 0.00 0.00 2.75
2322 2663 0.894141 GAGAGAAGAGGCAGCACTGA 59.106 55.000 0.81 0.00 0.00 3.41
2324 2665 0.252193 AGGAGAGAAGAGGCAGCACT 60.252 55.000 0.00 0.00 0.00 4.40
2325 2666 1.479709 TAGGAGAGAAGAGGCAGCAC 58.520 55.000 0.00 0.00 0.00 4.40
2327 2668 1.827969 TGTTAGGAGAGAAGAGGCAGC 59.172 52.381 0.00 0.00 0.00 5.25
2328 2669 4.543590 TTTGTTAGGAGAGAAGAGGCAG 57.456 45.455 0.00 0.00 0.00 4.85
2329 2670 4.974645 TTTTGTTAGGAGAGAAGAGGCA 57.025 40.909 0.00 0.00 0.00 4.75
2330 2671 5.940470 TGATTTTTGTTAGGAGAGAAGAGGC 59.060 40.000 0.00 0.00 0.00 4.70
2331 2672 7.986085 TTGATTTTTGTTAGGAGAGAAGAGG 57.014 36.000 0.00 0.00 0.00 3.69
2332 2673 8.457261 CCATTGATTTTTGTTAGGAGAGAAGAG 58.543 37.037 0.00 0.00 0.00 2.85
2336 2677 9.973661 TTATCCATTGATTTTTGTTAGGAGAGA 57.026 29.630 0.00 0.00 32.18 3.10
2379 2721 3.427503 CCGGCTTTGCTAATCATCGTTTT 60.428 43.478 0.00 0.00 0.00 2.43
2382 2724 1.134521 TCCGGCTTTGCTAATCATCGT 60.135 47.619 0.00 0.00 0.00 3.73
2383 2725 1.581934 TCCGGCTTTGCTAATCATCG 58.418 50.000 0.00 0.00 0.00 3.84
2386 2728 4.887071 ACATTATTCCGGCTTTGCTAATCA 59.113 37.500 0.00 0.00 0.00 2.57
2397 2739 5.751243 AAGTACATCAACATTATTCCGGC 57.249 39.130 0.00 0.00 0.00 6.13
2406 2748 9.236006 AGAGCAAGAAATTAAGTACATCAACAT 57.764 29.630 0.00 0.00 0.00 2.71
2416 2762 6.299141 TGAGTTGGAGAGCAAGAAATTAAGT 58.701 36.000 0.00 0.00 0.00 2.24
2451 2797 1.552337 TGGTTGGACAGCAAGCAAAAA 59.448 42.857 0.00 0.00 37.15 1.94
2452 2798 1.189752 TGGTTGGACAGCAAGCAAAA 58.810 45.000 0.00 0.00 37.15 2.44
2496 2843 7.719778 AGGCAGCTTTCAAAAATAAAAAGAG 57.280 32.000 0.00 0.00 32.89 2.85
2498 2845 8.593492 ACTAGGCAGCTTTCAAAAATAAAAAG 57.407 30.769 0.00 0.00 34.00 2.27
2500 2847 9.691362 CTAACTAGGCAGCTTTCAAAAATAAAA 57.309 29.630 0.00 0.00 0.00 1.52
2501 2848 8.856103 ACTAACTAGGCAGCTTTCAAAAATAAA 58.144 29.630 0.00 0.00 0.00 1.40
2502 2849 8.404107 ACTAACTAGGCAGCTTTCAAAAATAA 57.596 30.769 0.00 0.00 0.00 1.40
2503 2850 7.996098 ACTAACTAGGCAGCTTTCAAAAATA 57.004 32.000 0.00 0.00 0.00 1.40
2504 2851 6.901081 ACTAACTAGGCAGCTTTCAAAAAT 57.099 33.333 0.00 0.00 0.00 1.82
2508 2855 3.994392 CGAACTAACTAGGCAGCTTTCAA 59.006 43.478 0.00 0.00 0.00 2.69
2530 2880 7.096722 CCGTTAGCAGATGTAGTAATTAACGAC 60.097 40.741 13.11 0.00 42.55 4.34
2708 3103 2.264455 AGGATATCAAGCTAGCCAGGG 58.736 52.381 12.13 0.00 29.26 4.45
2773 3168 6.765036 AGATACTGATTCACAATCACATGACC 59.235 38.462 0.00 0.00 42.69 4.02
2783 3178 9.942850 TCACATAGAAAAGATACTGATTCACAA 57.057 29.630 0.00 0.00 0.00 3.33
2784 3179 9.942850 TTCACATAGAAAAGATACTGATTCACA 57.057 29.630 0.00 0.00 32.05 3.58
2844 3242 4.388499 CACGGCTACACGGGGCTT 62.388 66.667 0.00 0.00 38.39 4.35
2848 3246 3.195002 CATGCACGGCTACACGGG 61.195 66.667 0.00 0.00 41.00 5.28
2867 3265 2.758736 AGAGCTGCAGTTAACCTCTG 57.241 50.000 16.64 0.64 32.07 3.35
2920 3318 3.939592 AGCTTAAAACACGGCTAATCTCC 59.060 43.478 0.00 0.00 32.94 3.71
2943 3341 5.357596 CCGGGTATAATCCCTTTTCGAAAAA 59.642 40.000 22.67 10.06 44.95 1.94
2945 3343 4.453751 CCGGGTATAATCCCTTTTCGAAA 58.546 43.478 6.47 6.47 44.95 3.46
2947 3345 2.224354 GCCGGGTATAATCCCTTTTCGA 60.224 50.000 2.18 0.00 44.95 3.71
2948 3346 2.148768 GCCGGGTATAATCCCTTTTCG 58.851 52.381 2.18 0.00 44.95 3.46
2949 3347 3.503800 AGCCGGGTATAATCCCTTTTC 57.496 47.619 3.10 0.00 44.95 2.29
2950 3348 3.462205 AGAAGCCGGGTATAATCCCTTTT 59.538 43.478 6.57 0.00 44.95 2.27
2951 3349 3.053826 AGAAGCCGGGTATAATCCCTTT 58.946 45.455 6.57 0.00 44.95 3.11
2952 3350 2.372172 CAGAAGCCGGGTATAATCCCTT 59.628 50.000 6.57 0.00 44.95 3.95
2953 3351 1.978580 CAGAAGCCGGGTATAATCCCT 59.021 52.381 6.57 0.00 44.95 4.20
2954 3352 1.610886 GCAGAAGCCGGGTATAATCCC 60.611 57.143 6.57 0.00 43.78 3.85
2955 3353 1.071699 TGCAGAAGCCGGGTATAATCC 59.928 52.381 6.57 0.00 41.13 3.01
2956 3354 2.543777 TGCAGAAGCCGGGTATAATC 57.456 50.000 6.57 0.00 41.13 1.75
2957 3355 2.371841 TGATGCAGAAGCCGGGTATAAT 59.628 45.455 6.57 0.00 41.13 1.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.