Multiple sequence alignment - TraesCS2D01G069800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G069800 chr2D 100.000 2564 0 0 1 2564 29284122 29286685 0.000000e+00 4735.0
1 TraesCS2D01G069800 chr2D 87.172 725 90 2 1000 1724 27824438 27823717 0.000000e+00 821.0
2 TraesCS2D01G069800 chr2D 100.000 444 0 0 2878 3321 29286999 29287442 0.000000e+00 821.0
3 TraesCS2D01G069800 chr2D 97.052 441 13 0 2881 3321 295151653 295151213 0.000000e+00 743.0
4 TraesCS2D01G069800 chr2D 84.259 216 30 4 2118 2332 27823564 27823352 1.210000e-49 207.0
5 TraesCS2D01G069800 chr2A 87.087 2602 185 79 1 2539 31596623 31599136 0.000000e+00 2804.0
6 TraesCS2D01G069800 chr2A 86.676 728 94 3 1000 1724 29933833 29934560 0.000000e+00 804.0
7 TraesCS2D01G069800 chr2A 86.676 728 94 3 1000 1724 29956517 29955790 0.000000e+00 804.0
8 TraesCS2D01G069800 chr2A 97.052 441 13 0 2881 3321 652373166 652373606 0.000000e+00 743.0
9 TraesCS2D01G069800 chr2A 96.825 441 14 0 2881 3321 2277672 2278112 0.000000e+00 737.0
10 TraesCS2D01G069800 chr2A 85.876 177 25 0 2118 2294 29934713 29934889 4.370000e-44 189.0
11 TraesCS2D01G069800 chr2A 83.333 204 34 0 2118 2321 29955637 29955434 4.370000e-44 189.0
12 TraesCS2D01G069800 chr2B 89.179 2144 119 55 465 2539 47250787 47248688 0.000000e+00 2569.0
13 TraesCS2D01G069800 chr2B 89.200 1213 75 31 827 2007 47230807 47231995 0.000000e+00 1463.0
14 TraesCS2D01G069800 chr2B 86.264 728 97 3 1000 1724 44109595 44108868 0.000000e+00 787.0
15 TraesCS2D01G069800 chr2B 85.103 725 105 1 1000 1724 44027804 44028525 0.000000e+00 737.0
16 TraesCS2D01G069800 chr2B 81.159 207 34 4 2126 2328 44028686 44028891 9.530000e-36 161.0
17 TraesCS2D01G069800 chr2B 91.860 86 6 1 328 413 47251555 47251471 5.820000e-23 119.0
18 TraesCS2D01G069800 chr2B 95.238 63 3 0 415 477 47250869 47250807 2.110000e-17 100.0
19 TraesCS2D01G069800 chr2B 95.745 47 1 1 2012 2058 550399726 550399681 1.280000e-09 75.0
20 TraesCS2D01G069800 chr7D 97.506 441 10 1 2881 3321 422178639 422178200 0.000000e+00 752.0
21 TraesCS2D01G069800 chr6A 97.500 440 11 0 2881 3320 289018941 289018502 0.000000e+00 752.0
22 TraesCS2D01G069800 chr4B 97.052 441 13 0 2881 3321 64814775 64814335 0.000000e+00 743.0
23 TraesCS2D01G069800 chr4B 97.826 46 1 0 2012 2057 180995384 180995429 2.750000e-11 80.5
24 TraesCS2D01G069800 chr4B 97.727 44 1 0 2012 2055 640017314 640017271 3.550000e-10 76.8
25 TraesCS2D01G069800 chr7B 96.825 441 14 0 2881 3321 368207413 368206973 0.000000e+00 737.0
26 TraesCS2D01G069800 chr7B 97.826 46 1 0 2012 2057 114501909 114501864 2.750000e-11 80.5
27 TraesCS2D01G069800 chr5D 96.825 441 14 0 2881 3321 9063173 9062733 0.000000e+00 737.0
28 TraesCS2D01G069800 chr5D 96.825 441 14 0 2881 3321 374251892 374252332 0.000000e+00 737.0
29 TraesCS2D01G069800 chr6D 76.012 346 78 5 1382 1726 449251752 449252093 1.220000e-39 174.0
30 TraesCS2D01G069800 chr5B 77.826 230 44 7 1438 1665 369153962 369153738 5.780000e-28 135.0
31 TraesCS2D01G069800 chr3B 100.000 44 0 0 2012 2055 638287974 638288017 7.640000e-12 82.4
32 TraesCS2D01G069800 chr3B 87.931 58 5 1 2000 2057 161129581 161129526 2.140000e-07 67.6
33 TraesCS2D01G069800 chrUn 97.727 44 1 0 2010 2053 122074122 122074079 3.550000e-10 76.8
34 TraesCS2D01G069800 chr4D 94.000 50 1 2 2002 2051 113929729 113929776 1.280000e-09 75.0
35 TraesCS2D01G069800 chr1B 95.745 47 1 1 2012 2058 39812875 39812830 1.280000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G069800 chr2D 29284122 29287442 3320 False 2778.000000 4735 100.000000 1 3321 2 chr2D.!!$F1 3320
1 TraesCS2D01G069800 chr2D 27823352 27824438 1086 True 514.000000 821 85.715500 1000 2332 2 chr2D.!!$R2 1332
2 TraesCS2D01G069800 chr2A 31596623 31599136 2513 False 2804.000000 2804 87.087000 1 2539 1 chr2A.!!$F2 2538
3 TraesCS2D01G069800 chr2A 29933833 29934889 1056 False 496.500000 804 86.276000 1000 2294 2 chr2A.!!$F4 1294
4 TraesCS2D01G069800 chr2A 29955434 29956517 1083 True 496.500000 804 85.004500 1000 2321 2 chr2A.!!$R1 1321
5 TraesCS2D01G069800 chr2B 47230807 47231995 1188 False 1463.000000 1463 89.200000 827 2007 1 chr2B.!!$F1 1180
6 TraesCS2D01G069800 chr2B 47248688 47251555 2867 True 929.333333 2569 92.092333 328 2539 3 chr2B.!!$R3 2211
7 TraesCS2D01G069800 chr2B 44108868 44109595 727 True 787.000000 787 86.264000 1000 1724 1 chr2B.!!$R1 724
8 TraesCS2D01G069800 chr2B 44027804 44028891 1087 False 449.000000 737 83.131000 1000 2328 2 chr2B.!!$F2 1328

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.036388 ACTAGGTCATGGTGTTGGCG 60.036 55.0 0.0 0.0 0.00 5.69 F
106 107 1.106285 GGCCAAGCCTTAGTTGATGG 58.894 55.0 0.0 0.0 46.69 3.51 F
1332 2019 0.035152 AGCAATGCGACATCTCCCAA 60.035 50.0 0.0 0.0 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1149 1836 0.832135 TCTTGGCGAAGTGGAGGTCT 60.832 55.0 8.41 0.0 0.00 3.85 R
2104 2867 0.618458 TGTTCCCTGTACCATCCAGC 59.382 55.0 0.00 0.0 0.00 4.85 R
2910 3699 0.034089 ATGACCAAGGGCTTGCCTAC 60.034 55.0 11.71 0.0 39.16 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 0.036388 ACTAGGTCATGGTGTTGGCG 60.036 55.000 0.00 0.00 0.00 5.69
106 107 1.106285 GGCCAAGCCTTAGTTGATGG 58.894 55.000 0.00 0.00 46.69 3.51
126 127 8.506168 TGATGGAACTTAAGTGAATTATGTCC 57.494 34.615 9.34 10.05 32.21 4.02
130 131 8.573035 TGGAACTTAAGTGAATTATGTCCAAAC 58.427 33.333 15.70 0.00 32.21 2.93
146 147 7.181143 TGTCCAAACTTAAGTGAATTACGTC 57.819 36.000 9.34 0.00 0.00 4.34
148 149 5.077424 CCAAACTTAAGTGAATTACGTCGC 58.923 41.667 9.34 0.00 0.00 5.19
163 164 1.713404 CGTCGCGTTTGCATGAATTTT 59.287 42.857 5.77 0.00 42.97 1.82
164 165 2.905546 CGTCGCGTTTGCATGAATTTTA 59.094 40.909 5.77 0.00 42.97 1.52
175 176 4.461081 TGCATGAATTTTAGCCGGTTTAGT 59.539 37.500 1.90 0.00 0.00 2.24
180 181 6.440436 TGAATTTTAGCCGGTTTAGTTGAAC 58.560 36.000 1.90 0.00 0.00 3.18
187 188 3.731089 CCGGTTTAGTTGAACTGTGGTA 58.269 45.455 8.33 0.00 34.74 3.25
188 189 4.320870 CCGGTTTAGTTGAACTGTGGTAT 58.679 43.478 8.33 0.00 34.74 2.73
190 191 5.933463 CCGGTTTAGTTGAACTGTGGTATAA 59.067 40.000 8.33 0.00 34.74 0.98
192 193 7.120138 CCGGTTTAGTTGAACTGTGGTATAAAT 59.880 37.037 8.33 0.00 34.74 1.40
193 194 7.960738 CGGTTTAGTTGAACTGTGGTATAAATG 59.039 37.037 8.33 0.00 32.47 2.32
194 195 8.789762 GGTTTAGTTGAACTGTGGTATAAATGT 58.210 33.333 8.33 0.00 0.00 2.71
197 198 7.591006 AGTTGAACTGTGGTATAAATGTACG 57.409 36.000 0.00 0.00 0.00 3.67
198 199 7.380536 AGTTGAACTGTGGTATAAATGTACGA 58.619 34.615 0.00 0.00 0.00 3.43
199 200 7.544566 AGTTGAACTGTGGTATAAATGTACGAG 59.455 37.037 0.00 0.00 0.00 4.18
200 201 6.334989 TGAACTGTGGTATAAATGTACGAGG 58.665 40.000 0.00 0.00 0.00 4.63
205 206 4.443394 GTGGTATAAATGTACGAGGAAGCG 59.557 45.833 0.00 0.00 37.29 4.68
208 209 5.051240 GGTATAAATGTACGAGGAAGCGTTG 60.051 44.000 0.00 0.00 42.71 4.10
235 236 2.417516 CTCCCGCACCTGTATCCG 59.582 66.667 0.00 0.00 0.00 4.18
240 241 1.441729 CGCACCTGTATCCGTGGAT 59.558 57.895 6.63 6.63 38.54 3.41
249 250 1.489230 GTATCCGTGGATTGGTCCCTT 59.511 52.381 6.72 0.00 44.41 3.95
281 282 6.036083 CGGATAGATGCCGGAGTAAATTTATG 59.964 42.308 5.05 0.00 44.87 1.90
283 284 5.304686 AGATGCCGGAGTAAATTTATGGA 57.695 39.130 5.05 0.00 0.00 3.41
288 289 4.083271 GCCGGAGTAAATTTATGGATCAGC 60.083 45.833 5.05 2.45 0.00 4.26
292 293 6.422701 CGGAGTAAATTTATGGATCAGCGTTA 59.577 38.462 0.31 0.00 0.00 3.18
299 300 5.791336 TTATGGATCAGCGTTAGAGATGT 57.209 39.130 0.00 0.00 0.00 3.06
317 318 6.097412 AGAGATGTGCTTATGTATCACTGACA 59.903 38.462 0.00 0.00 0.00 3.58
321 322 7.075674 TGTGCTTATGTATCACTGACAATTG 57.924 36.000 3.24 3.24 0.00 2.32
371 372 8.950210 TGTAAGTTCTGGATCTTTCATGAAATC 58.050 33.333 20.76 15.74 0.00 2.17
448 1052 7.744087 ATTGTAATTATCAAGCTTATCGGCA 57.256 32.000 0.00 0.00 34.17 5.69
499 1135 7.728580 ATTATATTTTTACGCCACAAACGTG 57.271 32.000 0.00 0.00 44.79 4.49
507 1143 3.068560 ACGCCACAAACGTGTATTACAT 58.931 40.909 0.00 0.00 43.23 2.29
541 1180 3.372566 CCACCCCATAAACTGCTGGATAA 60.373 47.826 0.00 0.00 34.24 1.75
564 1203 3.132824 CCTCCAAAACCAAGCTTTCACTT 59.867 43.478 0.00 0.00 0.00 3.16
600 1239 5.480422 TCAAACTCTATAAGGAGCTGTGACA 59.520 40.000 0.00 0.00 36.87 3.58
617 1256 4.342378 TGTGACAAGGAGATGCTATAGTCC 59.658 45.833 0.84 0.28 0.00 3.85
659 1298 7.336931 ACCAACGACAGCAAGAATCTTATTAAT 59.663 33.333 0.00 0.00 0.00 1.40
738 1388 4.470664 TCGTACAACCACCCCATAAACTAT 59.529 41.667 0.00 0.00 0.00 2.12
817 1473 5.182380 ACTGAATACCAATACCACAAAACGG 59.818 40.000 0.00 0.00 0.00 4.44
818 1474 4.082679 TGAATACCAATACCACAAAACGGC 60.083 41.667 0.00 0.00 0.00 5.68
897 1565 2.016318 CTGCAGACAACTCACAACCAA 58.984 47.619 8.42 0.00 0.00 3.67
1317 2004 3.939939 TGCCTGGACTGCGAGCAA 61.940 61.111 0.00 0.00 0.00 3.91
1325 2012 1.699656 GACTGCGAGCAATGCGACAT 61.700 55.000 0.00 0.00 34.24 3.06
1332 2019 0.035152 AGCAATGCGACATCTCCCAA 60.035 50.000 0.00 0.00 0.00 4.12
1727 2429 1.002366 GACAAGCAGATGCAGGTACG 58.998 55.000 7.68 0.00 45.16 3.67
1737 2462 5.741425 CAGATGCAGGTACGTAATCAAATG 58.259 41.667 0.00 0.00 0.00 2.32
1777 2507 2.224695 TGTCAGTCCTCGAAGTCCACTA 60.225 50.000 0.00 0.00 0.00 2.74
1796 2526 2.879002 AGTCTGACTGATGCATACGG 57.121 50.000 10.00 1.09 0.00 4.02
1797 2527 1.202463 AGTCTGACTGATGCATACGGC 60.202 52.381 10.00 0.00 45.13 5.68
1798 2528 0.104855 TCTGACTGATGCATACGGCC 59.895 55.000 0.00 0.00 43.89 6.13
1799 2529 1.217585 CTGACTGATGCATACGGCCG 61.218 60.000 26.86 26.86 43.89 6.13
1813 2543 1.170442 CGGCCGGTCCAAAATTAACT 58.830 50.000 20.10 0.00 34.01 2.24
1818 2548 5.106442 GGCCGGTCCAAAATTAACTAATTG 58.894 41.667 1.90 0.00 33.94 2.32
1995 2730 0.377203 CCGCTTATTTTCGGTGAGCC 59.623 55.000 0.00 0.00 40.72 4.70
2010 2748 4.634004 CGGTGAGCCAACTAATTAACATGA 59.366 41.667 0.00 0.00 34.09 3.07
2011 2749 5.123186 CGGTGAGCCAACTAATTAACATGAA 59.877 40.000 0.00 0.00 34.09 2.57
2012 2750 6.555315 GGTGAGCCAACTAATTAACATGAAG 58.445 40.000 0.00 0.00 34.09 3.02
2013 2751 6.151144 GGTGAGCCAACTAATTAACATGAAGT 59.849 38.462 0.00 0.00 34.09 3.01
2014 2752 7.335924 GGTGAGCCAACTAATTAACATGAAGTA 59.664 37.037 0.00 0.00 34.09 2.24
2015 2753 8.726988 GTGAGCCAACTAATTAACATGAAGTAA 58.273 33.333 0.00 0.00 0.00 2.24
2017 2755 9.937175 GAGCCAACTAATTAACATGAAGTAATC 57.063 33.333 0.00 0.00 0.00 1.75
2018 2756 9.686683 AGCCAACTAATTAACATGAAGTAATCT 57.313 29.630 0.00 0.00 0.00 2.40
2027 2765 8.997621 TTAACATGAAGTAATCTAAACGCTCT 57.002 30.769 0.00 0.00 0.00 4.09
2028 2766 7.907214 AACATGAAGTAATCTAAACGCTCTT 57.093 32.000 0.00 0.00 0.00 2.85
2029 2767 8.997621 AACATGAAGTAATCTAAACGCTCTTA 57.002 30.769 0.00 0.00 0.00 2.10
2030 2768 9.601217 AACATGAAGTAATCTAAACGCTCTTAT 57.399 29.630 0.00 0.00 0.00 1.73
2045 2783 8.649973 AACGCTCTTATATTTCTTTACAGAGG 57.350 34.615 0.00 0.00 0.00 3.69
2046 2784 7.210873 ACGCTCTTATATTTCTTTACAGAGGG 58.789 38.462 8.36 8.36 42.53 4.30
2047 2785 7.069578 ACGCTCTTATATTTCTTTACAGAGGGA 59.930 37.037 14.96 0.00 40.49 4.20
2048 2786 7.596995 CGCTCTTATATTTCTTTACAGAGGGAG 59.403 40.741 4.76 0.00 40.49 4.30
2068 2831 1.331138 GTATGTACTCGCGCTGTCTCT 59.669 52.381 5.56 0.00 0.00 3.10
2071 2834 2.830104 TGTACTCGCGCTGTCTCTATA 58.170 47.619 5.56 0.00 0.00 1.31
2073 2836 0.945813 ACTCGCGCTGTCTCTATACC 59.054 55.000 5.56 0.00 0.00 2.73
2078 2841 1.920705 GCGCTGTCTCTATACCGTTCG 60.921 57.143 0.00 0.00 0.00 3.95
2090 2853 8.892723 TCTCTATACCGTTCGACAACTAATTTA 58.107 33.333 0.00 0.00 0.00 1.40
2109 2872 7.716799 AATTTAACATGGTAAATCTGCTGGA 57.283 32.000 25.20 0.00 33.50 3.86
2216 2992 0.101219 CATCACCTGCGACATCGAGA 59.899 55.000 5.26 0.00 43.02 4.04
2240 3016 0.037697 CTCCAACGACGGGATCAACA 60.038 55.000 0.00 0.00 33.04 3.33
2298 3074 1.724623 CCGTTTCGTCATCGACATTGT 59.275 47.619 0.00 0.00 46.03 2.71
2337 3115 5.120986 GGTTCTAGCTAGTTTTGTTGCTCTC 59.879 44.000 20.10 0.00 37.02 3.20
2343 3121 4.273480 GCTAGTTTTGTTGCTCTCTGTCAA 59.727 41.667 0.00 0.00 0.00 3.18
2344 3122 4.889832 AGTTTTGTTGCTCTCTGTCAAG 57.110 40.909 0.00 0.00 0.00 3.02
2347 3125 5.238214 AGTTTTGTTGCTCTCTGTCAAGATC 59.762 40.000 0.00 0.00 0.00 2.75
2348 3126 2.951726 TGTTGCTCTCTGTCAAGATCG 58.048 47.619 0.00 0.00 0.00 3.69
2356 3139 5.220378 GCTCTCTGTCAAGATCGAATGAAAC 60.220 44.000 0.00 0.00 0.00 2.78
2384 3167 2.595124 TCTGTTTGAGTTCAGCACGA 57.405 45.000 0.00 0.00 0.00 4.35
2552 3341 9.733556 ATTTGGTTAACTGTGTAGAATATGTGA 57.266 29.630 5.42 0.00 0.00 3.58
2553 3342 9.562408 TTTGGTTAACTGTGTAGAATATGTGAA 57.438 29.630 5.42 0.00 0.00 3.18
2554 3343 9.733556 TTGGTTAACTGTGTAGAATATGTGAAT 57.266 29.630 5.42 0.00 0.00 2.57
2555 3344 9.733556 TGGTTAACTGTGTAGAATATGTGAATT 57.266 29.630 5.42 0.00 0.00 2.17
2556 3345 9.988350 GGTTAACTGTGTAGAATATGTGAATTG 57.012 33.333 5.42 0.00 0.00 2.32
2557 3346 9.490663 GTTAACTGTGTAGAATATGTGAATTGC 57.509 33.333 0.00 0.00 0.00 3.56
2558 3347 7.686438 AACTGTGTAGAATATGTGAATTGCA 57.314 32.000 0.00 0.00 0.00 4.08
2896 3685 2.125773 TAGAGACTGGACCGGAACTC 57.874 55.000 9.46 14.41 0.00 3.01
2897 3686 0.612453 AGAGACTGGACCGGAACTCC 60.612 60.000 9.46 5.31 0.00 3.85
2898 3687 0.612453 GAGACTGGACCGGAACTCCT 60.612 60.000 9.46 0.00 0.00 3.69
2899 3688 0.612453 AGACTGGACCGGAACTCCTC 60.612 60.000 9.46 0.00 0.00 3.71
2900 3689 0.898789 GACTGGACCGGAACTCCTCA 60.899 60.000 9.46 0.00 0.00 3.86
2901 3690 0.471211 ACTGGACCGGAACTCCTCAA 60.471 55.000 9.46 0.00 0.00 3.02
2902 3691 0.685097 CTGGACCGGAACTCCTCAAA 59.315 55.000 9.46 0.00 0.00 2.69
2903 3692 1.279271 CTGGACCGGAACTCCTCAAAT 59.721 52.381 9.46 0.00 0.00 2.32
2904 3693 1.003118 TGGACCGGAACTCCTCAAATG 59.997 52.381 9.46 0.00 0.00 2.32
2905 3694 1.278127 GGACCGGAACTCCTCAAATGA 59.722 52.381 9.46 0.00 0.00 2.57
2906 3695 2.347731 GACCGGAACTCCTCAAATGAC 58.652 52.381 9.46 0.00 0.00 3.06
2907 3696 1.337823 ACCGGAACTCCTCAAATGACG 60.338 52.381 9.46 0.00 0.00 4.35
2908 3697 0.721718 CGGAACTCCTCAAATGACGC 59.278 55.000 0.00 0.00 0.00 5.19
2909 3698 1.087501 GGAACTCCTCAAATGACGCC 58.912 55.000 0.00 0.00 0.00 5.68
2910 3699 0.721718 GAACTCCTCAAATGACGCCG 59.278 55.000 0.00 0.00 0.00 6.46
2911 3700 0.034896 AACTCCTCAAATGACGCCGT 59.965 50.000 0.00 0.00 0.00 5.68
2912 3701 0.892755 ACTCCTCAAATGACGCCGTA 59.107 50.000 0.00 0.00 0.00 4.02
2913 3702 1.135083 ACTCCTCAAATGACGCCGTAG 60.135 52.381 0.00 0.00 0.00 3.51
2925 3714 2.438434 CCGTAGGCAAGCCCTTGG 60.438 66.667 7.62 3.06 46.14 3.61
2926 3715 2.351276 CGTAGGCAAGCCCTTGGT 59.649 61.111 7.62 0.00 43.06 3.67
2927 3716 1.745489 CGTAGGCAAGCCCTTGGTC 60.745 63.158 7.62 0.00 43.06 4.02
2928 3717 1.378762 GTAGGCAAGCCCTTGGTCA 59.621 57.895 7.62 0.00 43.06 4.02
2929 3718 0.034089 GTAGGCAAGCCCTTGGTCAT 60.034 55.000 7.62 0.00 43.06 3.06
2930 3719 0.034186 TAGGCAAGCCCTTGGTCATG 60.034 55.000 7.62 0.00 43.06 3.07
2931 3720 1.304381 GGCAAGCCCTTGGTCATGA 60.304 57.895 9.81 0.00 40.74 3.07
2932 3721 0.685458 GGCAAGCCCTTGGTCATGAT 60.685 55.000 9.81 0.00 40.74 2.45
2933 3722 1.410083 GGCAAGCCCTTGGTCATGATA 60.410 52.381 9.81 0.00 40.74 2.15
2934 3723 2.590821 GCAAGCCCTTGGTCATGATAT 58.409 47.619 9.81 0.00 40.74 1.63
2935 3724 2.555757 GCAAGCCCTTGGTCATGATATC 59.444 50.000 9.81 0.00 40.74 1.63
2936 3725 2.810274 CAAGCCCTTGGTCATGATATCG 59.190 50.000 0.00 0.00 36.95 2.92
2937 3726 1.349026 AGCCCTTGGTCATGATATCGG 59.651 52.381 0.00 0.00 0.00 4.18
2938 3727 1.813513 CCCTTGGTCATGATATCGGC 58.186 55.000 0.00 0.00 0.00 5.54
2939 3728 1.072173 CCCTTGGTCATGATATCGGCA 59.928 52.381 0.00 0.00 0.00 5.69
2940 3729 2.487086 CCCTTGGTCATGATATCGGCAA 60.487 50.000 0.00 0.00 0.00 4.52
2941 3730 3.213506 CCTTGGTCATGATATCGGCAAA 58.786 45.455 0.00 0.00 0.00 3.68
2942 3731 3.822735 CCTTGGTCATGATATCGGCAAAT 59.177 43.478 0.00 0.00 0.00 2.32
2943 3732 4.279169 CCTTGGTCATGATATCGGCAAATT 59.721 41.667 0.00 0.00 0.00 1.82
2944 3733 4.834357 TGGTCATGATATCGGCAAATTG 57.166 40.909 0.00 0.00 0.00 2.32
2945 3734 4.206375 TGGTCATGATATCGGCAAATTGT 58.794 39.130 0.00 0.00 0.00 2.71
2946 3735 4.644234 TGGTCATGATATCGGCAAATTGTT 59.356 37.500 0.00 0.00 0.00 2.83
2947 3736 4.977963 GGTCATGATATCGGCAAATTGTTG 59.022 41.667 0.00 0.00 37.83 3.33
2948 3737 4.977963 GTCATGATATCGGCAAATTGTTGG 59.022 41.667 0.00 0.00 35.10 3.77
2949 3738 4.037803 TCATGATATCGGCAAATTGTTGGG 59.962 41.667 0.00 0.00 35.10 4.12
2950 3739 3.625853 TGATATCGGCAAATTGTTGGGA 58.374 40.909 0.00 0.00 35.10 4.37
2951 3740 4.019858 TGATATCGGCAAATTGTTGGGAA 58.980 39.130 0.00 0.00 35.10 3.97
2952 3741 4.097741 TGATATCGGCAAATTGTTGGGAAG 59.902 41.667 0.00 0.00 35.10 3.46
2953 3742 1.698506 TCGGCAAATTGTTGGGAAGT 58.301 45.000 0.00 0.00 35.10 3.01
2954 3743 2.865079 TCGGCAAATTGTTGGGAAGTA 58.135 42.857 0.00 0.00 35.10 2.24
2955 3744 2.817258 TCGGCAAATTGTTGGGAAGTAG 59.183 45.455 0.00 0.00 35.10 2.57
2956 3745 2.094752 CGGCAAATTGTTGGGAAGTAGG 60.095 50.000 0.00 0.00 35.10 3.18
2957 3746 2.233676 GGCAAATTGTTGGGAAGTAGGG 59.766 50.000 0.00 0.00 35.10 3.53
2958 3747 3.161866 GCAAATTGTTGGGAAGTAGGGA 58.838 45.455 0.00 0.00 35.10 4.20
2959 3748 3.056821 GCAAATTGTTGGGAAGTAGGGAC 60.057 47.826 0.00 0.00 35.10 4.46
2960 3749 2.781681 ATTGTTGGGAAGTAGGGACG 57.218 50.000 0.00 0.00 0.00 4.79
2961 3750 1.426751 TTGTTGGGAAGTAGGGACGT 58.573 50.000 0.00 0.00 0.00 4.34
2962 3751 0.682852 TGTTGGGAAGTAGGGACGTG 59.317 55.000 0.00 0.00 0.00 4.49
2963 3752 0.683412 GTTGGGAAGTAGGGACGTGT 59.317 55.000 0.00 0.00 0.00 4.49
2964 3753 1.895131 GTTGGGAAGTAGGGACGTGTA 59.105 52.381 0.00 0.00 0.00 2.90
2965 3754 2.299867 GTTGGGAAGTAGGGACGTGTAA 59.700 50.000 0.00 0.00 0.00 2.41
2966 3755 2.607499 TGGGAAGTAGGGACGTGTAAA 58.393 47.619 0.00 0.00 0.00 2.01
2967 3756 2.971330 TGGGAAGTAGGGACGTGTAAAA 59.029 45.455 0.00 0.00 0.00 1.52
2968 3757 3.244181 TGGGAAGTAGGGACGTGTAAAAC 60.244 47.826 0.00 0.00 0.00 2.43
2969 3758 3.244181 GGGAAGTAGGGACGTGTAAAACA 60.244 47.826 0.00 0.00 0.00 2.83
2970 3759 3.742882 GGAAGTAGGGACGTGTAAAACAC 59.257 47.826 0.00 0.01 45.26 3.32
2981 3770 4.688511 GTGTAAAACACGAATATGGCCA 57.311 40.909 8.56 8.56 39.53 5.36
2982 3771 5.049398 GTGTAAAACACGAATATGGCCAA 57.951 39.130 10.96 0.00 39.53 4.52
2983 3772 5.092781 GTGTAAAACACGAATATGGCCAAG 58.907 41.667 10.96 1.30 39.53 3.61
2984 3773 3.866883 AAAACACGAATATGGCCAAGG 57.133 42.857 10.96 0.00 0.00 3.61
2985 3774 1.762708 AACACGAATATGGCCAAGGG 58.237 50.000 10.96 2.53 0.00 3.95
3000 3789 3.326900 GGGCCACCTATTCCCGAA 58.673 61.111 4.39 0.00 0.00 4.30
3001 3790 1.153025 GGGCCACCTATTCCCGAAC 60.153 63.158 4.39 0.00 0.00 3.95
3002 3791 1.605453 GGCCACCTATTCCCGAACA 59.395 57.895 0.00 0.00 0.00 3.18
3003 3792 0.034863 GGCCACCTATTCCCGAACAA 60.035 55.000 0.00 0.00 0.00 2.83
3004 3793 1.614850 GGCCACCTATTCCCGAACAAA 60.615 52.381 0.00 0.00 0.00 2.83
3005 3794 2.164338 GCCACCTATTCCCGAACAAAA 58.836 47.619 0.00 0.00 0.00 2.44
3006 3795 2.758423 GCCACCTATTCCCGAACAAAAT 59.242 45.455 0.00 0.00 0.00 1.82
3007 3796 3.428862 GCCACCTATTCCCGAACAAAATG 60.429 47.826 0.00 0.00 0.00 2.32
3008 3797 4.013728 CCACCTATTCCCGAACAAAATGA 58.986 43.478 0.00 0.00 0.00 2.57
3009 3798 4.461081 CCACCTATTCCCGAACAAAATGAA 59.539 41.667 0.00 0.00 0.00 2.57
3010 3799 5.127031 CCACCTATTCCCGAACAAAATGAAT 59.873 40.000 0.00 0.00 0.00 2.57
3011 3800 6.320164 CCACCTATTCCCGAACAAAATGAATA 59.680 38.462 0.00 0.00 0.00 1.75
3012 3801 7.014230 CCACCTATTCCCGAACAAAATGAATAT 59.986 37.037 0.00 0.00 30.12 1.28
3013 3802 8.076178 CACCTATTCCCGAACAAAATGAATATC 58.924 37.037 0.00 0.00 30.12 1.63
3014 3803 7.230712 ACCTATTCCCGAACAAAATGAATATCC 59.769 37.037 0.00 0.00 30.12 2.59
3015 3804 7.230510 CCTATTCCCGAACAAAATGAATATCCA 59.769 37.037 0.00 0.00 30.12 3.41
3016 3805 6.842437 TTCCCGAACAAAATGAATATCCAA 57.158 33.333 0.00 0.00 0.00 3.53
3017 3806 6.202516 TCCCGAACAAAATGAATATCCAAC 57.797 37.500 0.00 0.00 0.00 3.77
3018 3807 5.949354 TCCCGAACAAAATGAATATCCAACT 59.051 36.000 0.00 0.00 0.00 3.16
3019 3808 6.094881 TCCCGAACAAAATGAATATCCAACTC 59.905 38.462 0.00 0.00 0.00 3.01
3020 3809 6.127758 CCCGAACAAAATGAATATCCAACTCA 60.128 38.462 0.00 0.00 0.00 3.41
3021 3810 7.312154 CCGAACAAAATGAATATCCAACTCAA 58.688 34.615 0.00 0.00 0.00 3.02
3022 3811 7.975616 CCGAACAAAATGAATATCCAACTCAAT 59.024 33.333 0.00 0.00 0.00 2.57
3026 3815 9.754382 ACAAAATGAATATCCAACTCAATATGC 57.246 29.630 0.00 0.00 0.00 3.14
3027 3816 9.976511 CAAAATGAATATCCAACTCAATATGCT 57.023 29.630 0.00 0.00 0.00 3.79
3029 3818 9.976511 AAATGAATATCCAACTCAATATGCTTG 57.023 29.630 0.00 0.00 0.00 4.01
3030 3819 7.514784 TGAATATCCAACTCAATATGCTTGG 57.485 36.000 0.00 0.00 35.42 3.61
3031 3820 7.062322 TGAATATCCAACTCAATATGCTTGGT 58.938 34.615 0.00 0.00 35.58 3.67
3032 3821 7.229306 TGAATATCCAACTCAATATGCTTGGTC 59.771 37.037 0.00 0.00 35.58 4.02
3033 3822 3.620488 TCCAACTCAATATGCTTGGTCC 58.380 45.455 0.00 0.00 35.58 4.46
3034 3823 2.355756 CCAACTCAATATGCTTGGTCCG 59.644 50.000 0.00 0.00 0.00 4.79
3035 3824 3.009723 CAACTCAATATGCTTGGTCCGT 58.990 45.455 0.00 0.00 0.00 4.69
3036 3825 2.906354 ACTCAATATGCTTGGTCCGTC 58.094 47.619 0.00 0.00 0.00 4.79
3037 3826 1.860950 CTCAATATGCTTGGTCCGTCG 59.139 52.381 0.00 0.00 0.00 5.12
3038 3827 1.478916 TCAATATGCTTGGTCCGTCGA 59.521 47.619 0.00 0.00 0.00 4.20
3039 3828 2.102420 TCAATATGCTTGGTCCGTCGAT 59.898 45.455 0.00 0.00 0.00 3.59
3040 3829 2.154854 ATATGCTTGGTCCGTCGATG 57.845 50.000 0.00 0.00 0.00 3.84
3041 3830 1.107945 TATGCTTGGTCCGTCGATGA 58.892 50.000 6.11 0.00 0.00 2.92
3042 3831 0.465705 ATGCTTGGTCCGTCGATGAT 59.534 50.000 6.11 0.00 0.00 2.45
3043 3832 0.460109 TGCTTGGTCCGTCGATGATG 60.460 55.000 6.11 0.00 0.00 3.07
3044 3833 1.766143 GCTTGGTCCGTCGATGATGC 61.766 60.000 6.11 0.00 0.00 3.91
3045 3834 0.460109 CTTGGTCCGTCGATGATGCA 60.460 55.000 6.11 0.00 0.00 3.96
3046 3835 0.739462 TTGGTCCGTCGATGATGCAC 60.739 55.000 6.11 0.00 0.00 4.57
3047 3836 1.883084 GGTCCGTCGATGATGCACC 60.883 63.158 6.11 2.93 0.00 5.01
3048 3837 2.104132 TCCGTCGATGATGCACCG 59.896 61.111 6.11 0.00 0.00 4.94
3049 3838 2.961721 CCGTCGATGATGCACCGG 60.962 66.667 6.11 0.00 0.00 5.28
3050 3839 2.961721 CGTCGATGATGCACCGGG 60.962 66.667 6.32 0.00 0.00 5.73
3051 3840 2.186903 GTCGATGATGCACCGGGT 59.813 61.111 6.32 0.00 0.00 5.28
3052 3841 1.449601 GTCGATGATGCACCGGGTT 60.450 57.895 6.32 0.00 0.00 4.11
3053 3842 0.179094 GTCGATGATGCACCGGGTTA 60.179 55.000 6.32 0.00 0.00 2.85
3054 3843 0.104120 TCGATGATGCACCGGGTTAG 59.896 55.000 6.32 0.00 0.00 2.34
3055 3844 1.498865 CGATGATGCACCGGGTTAGC 61.499 60.000 6.32 4.80 0.00 3.09
3056 3845 1.498865 GATGATGCACCGGGTTAGCG 61.499 60.000 6.32 0.00 0.00 4.26
3057 3846 2.895372 GATGCACCGGGTTAGCGG 60.895 66.667 6.32 0.00 0.00 5.52
3058 3847 3.379865 GATGCACCGGGTTAGCGGA 62.380 63.158 6.32 0.00 0.00 5.54
3059 3848 3.385749 ATGCACCGGGTTAGCGGAG 62.386 63.158 6.32 0.00 0.00 4.63
3060 3849 3.766691 GCACCGGGTTAGCGGAGA 61.767 66.667 6.32 0.00 0.00 3.71
3061 3850 2.494918 CACCGGGTTAGCGGAGAG 59.505 66.667 6.32 0.00 0.00 3.20
3062 3851 2.758737 ACCGGGTTAGCGGAGAGG 60.759 66.667 6.32 0.00 0.00 3.69
3063 3852 2.758737 CCGGGTTAGCGGAGAGGT 60.759 66.667 0.00 0.00 0.00 3.85
3064 3853 1.454479 CCGGGTTAGCGGAGAGGTA 60.454 63.158 0.00 0.00 0.00 3.08
3065 3854 1.453762 CCGGGTTAGCGGAGAGGTAG 61.454 65.000 0.00 0.00 33.95 3.18
3066 3855 0.465097 CGGGTTAGCGGAGAGGTAGA 60.465 60.000 0.00 0.00 33.95 2.59
3067 3856 1.031235 GGGTTAGCGGAGAGGTAGAC 58.969 60.000 0.00 0.00 33.95 2.59
3068 3857 1.031235 GGTTAGCGGAGAGGTAGACC 58.969 60.000 0.00 0.00 33.95 3.85
3072 3861 3.584052 CGGAGAGGTAGACCGCCG 61.584 72.222 13.56 13.56 41.11 6.46
3073 3862 2.124403 GGAGAGGTAGACCGCCGA 60.124 66.667 0.00 0.00 42.08 5.54
3074 3863 2.188161 GGAGAGGTAGACCGCCGAG 61.188 68.421 0.00 0.00 42.08 4.63
3075 3864 1.153208 GAGAGGTAGACCGCCGAGA 60.153 63.158 0.00 0.00 42.08 4.04
3076 3865 1.438562 GAGAGGTAGACCGCCGAGAC 61.439 65.000 0.00 0.00 42.08 3.36
3077 3866 2.821688 GAGGTAGACCGCCGAGACG 61.822 68.421 0.00 0.00 42.08 4.18
3078 3867 3.130160 GGTAGACCGCCGAGACGT 61.130 66.667 0.00 0.00 0.00 4.34
3079 3868 2.694760 GGTAGACCGCCGAGACGTT 61.695 63.158 0.00 0.00 0.00 3.99
3080 3869 1.513586 GTAGACCGCCGAGACGTTG 60.514 63.158 0.00 0.00 0.00 4.10
3081 3870 1.968017 TAGACCGCCGAGACGTTGT 60.968 57.895 0.00 0.00 0.00 3.32
3082 3871 1.915614 TAGACCGCCGAGACGTTGTC 61.916 60.000 0.00 0.00 0.00 3.18
3083 3872 4.695231 ACCGCCGAGACGTTGTCG 62.695 66.667 12.85 12.85 37.67 4.35
3086 3875 3.470567 GCCGAGACGTTGTCGCAG 61.471 66.667 14.03 4.92 41.18 5.18
3087 3876 2.050351 CCGAGACGTTGTCGCAGT 60.050 61.111 14.03 0.00 41.18 4.40
3088 3877 1.208358 CCGAGACGTTGTCGCAGTA 59.792 57.895 14.03 0.00 41.18 2.74
3089 3878 0.793478 CCGAGACGTTGTCGCAGTAG 60.793 60.000 14.03 0.00 41.18 2.57
3090 3879 0.165295 CGAGACGTTGTCGCAGTAGA 59.835 55.000 8.14 0.00 41.18 2.59
3091 3880 1.604396 GAGACGTTGTCGCAGTAGAC 58.396 55.000 0.00 0.00 41.18 2.59
3092 3881 0.240411 AGACGTTGTCGCAGTAGACC 59.760 55.000 0.00 0.00 40.26 3.85
3093 3882 0.039798 GACGTTGTCGCAGTAGACCA 60.040 55.000 0.00 0.00 40.26 4.02
3094 3883 0.318445 ACGTTGTCGCAGTAGACCAC 60.318 55.000 0.00 0.00 40.26 4.16
3095 3884 1.007336 CGTTGTCGCAGTAGACCACC 61.007 60.000 0.00 0.00 40.26 4.61
3096 3885 1.007336 GTTGTCGCAGTAGACCACCG 61.007 60.000 0.00 0.00 40.26 4.94
3097 3886 1.457823 TTGTCGCAGTAGACCACCGT 61.458 55.000 0.00 0.00 40.26 4.83
3098 3887 1.443872 GTCGCAGTAGACCACCGTG 60.444 63.158 0.00 0.00 35.22 4.94
3099 3888 2.126071 CGCAGTAGACCACCGTGG 60.126 66.667 16.47 16.47 45.02 4.94
3100 3889 2.434359 GCAGTAGACCACCGTGGC 60.434 66.667 17.99 10.36 42.67 5.01
3101 3890 3.056458 CAGTAGACCACCGTGGCA 58.944 61.111 17.99 0.03 42.67 4.92
3102 3891 1.596934 CAGTAGACCACCGTGGCAT 59.403 57.895 17.99 8.81 42.67 4.40
3103 3892 0.740868 CAGTAGACCACCGTGGCATG 60.741 60.000 17.99 0.00 42.67 4.06
3104 3893 1.449601 GTAGACCACCGTGGCATGG 60.450 63.158 24.09 24.09 42.67 3.66
3107 3896 3.565214 ACCACCGTGGCATGGTCA 61.565 61.111 28.21 0.00 46.62 4.02
3108 3897 2.282110 CCACCGTGGCATGGTCAA 60.282 61.111 28.21 0.00 34.66 3.18
3109 3898 2.625823 CCACCGTGGCATGGTCAAC 61.626 63.158 28.21 0.00 34.66 3.18
3110 3899 1.896183 CACCGTGGCATGGTCAACA 60.896 57.895 28.21 0.00 34.66 3.33
3111 3900 1.600636 ACCGTGGCATGGTCAACAG 60.601 57.895 25.59 0.24 29.77 3.16
3112 3901 2.334946 CCGTGGCATGGTCAACAGG 61.335 63.158 17.89 0.00 0.00 4.00
3113 3902 1.302431 CGTGGCATGGTCAACAGGA 60.302 57.895 0.00 0.00 31.04 3.86
3114 3903 1.577328 CGTGGCATGGTCAACAGGAC 61.577 60.000 0.00 0.00 46.20 3.85
3123 3912 2.829741 GTCAACAGGACAAGAGAGCT 57.170 50.000 0.00 0.00 46.19 4.09
3124 3913 2.682836 GTCAACAGGACAAGAGAGCTC 58.317 52.381 5.27 5.27 46.19 4.09
3125 3914 1.620819 TCAACAGGACAAGAGAGCTCC 59.379 52.381 10.93 1.70 0.00 4.70
3126 3915 1.622811 CAACAGGACAAGAGAGCTCCT 59.377 52.381 10.93 4.36 34.51 3.69
3129 3918 2.317371 AGGACAAGAGAGCTCCTGAA 57.683 50.000 10.93 0.00 32.85 3.02
3130 3919 2.178580 AGGACAAGAGAGCTCCTGAAG 58.821 52.381 10.93 0.00 32.85 3.02
3180 3969 3.049674 CGTTGGCCACTGCACGAT 61.050 61.111 20.51 0.00 38.70 3.73
3181 3970 1.739929 CGTTGGCCACTGCACGATA 60.740 57.895 20.51 0.00 38.70 2.92
3182 3971 1.794222 GTTGGCCACTGCACGATAC 59.206 57.895 3.88 0.00 40.13 2.24
3183 3972 0.673644 GTTGGCCACTGCACGATACT 60.674 55.000 3.88 0.00 40.13 2.12
3184 3973 0.391130 TTGGCCACTGCACGATACTC 60.391 55.000 3.88 0.00 40.13 2.59
3185 3974 1.218047 GGCCACTGCACGATACTCA 59.782 57.895 0.00 0.00 40.13 3.41
3186 3975 0.807667 GGCCACTGCACGATACTCAG 60.808 60.000 0.00 0.00 40.13 3.35
3187 3976 1.424493 GCCACTGCACGATACTCAGC 61.424 60.000 0.00 0.00 37.47 4.26
3188 3977 0.807667 CCACTGCACGATACTCAGCC 60.808 60.000 0.00 0.00 0.00 4.85
3189 3978 0.174389 CACTGCACGATACTCAGCCT 59.826 55.000 0.00 0.00 0.00 4.58
3190 3979 0.457851 ACTGCACGATACTCAGCCTC 59.542 55.000 0.00 0.00 0.00 4.70
3191 3980 0.457443 CTGCACGATACTCAGCCTCA 59.543 55.000 0.00 0.00 0.00 3.86
3192 3981 0.457443 TGCACGATACTCAGCCTCAG 59.543 55.000 0.00 0.00 0.00 3.35
3193 3982 0.873743 GCACGATACTCAGCCTCAGC 60.874 60.000 0.00 0.00 40.32 4.26
3194 3983 0.457443 CACGATACTCAGCCTCAGCA 59.543 55.000 0.00 0.00 43.56 4.41
3195 3984 0.457851 ACGATACTCAGCCTCAGCAC 59.542 55.000 0.00 0.00 43.56 4.40
3196 3985 0.743688 CGATACTCAGCCTCAGCACT 59.256 55.000 0.00 0.00 43.56 4.40
3197 3986 1.535649 CGATACTCAGCCTCAGCACTG 60.536 57.143 0.00 0.00 43.56 3.66
3198 3987 0.829333 ATACTCAGCCTCAGCACTGG 59.171 55.000 0.00 0.00 43.56 4.00
3199 3988 0.251787 TACTCAGCCTCAGCACTGGA 60.252 55.000 0.00 0.00 43.56 3.86
3200 3989 1.123861 ACTCAGCCTCAGCACTGGAA 61.124 55.000 0.00 0.00 43.56 3.53
3201 3990 0.673022 CTCAGCCTCAGCACTGGAAC 60.673 60.000 0.00 0.00 43.56 3.62
3202 3991 2.031516 CAGCCTCAGCACTGGAACG 61.032 63.158 0.00 0.00 43.56 3.95
3203 3992 2.210013 AGCCTCAGCACTGGAACGA 61.210 57.895 0.00 0.00 43.56 3.85
3204 3993 1.739562 GCCTCAGCACTGGAACGAG 60.740 63.158 0.00 0.00 39.53 4.18
3205 3994 1.967535 CCTCAGCACTGGAACGAGA 59.032 57.895 0.00 0.00 0.00 4.04
3206 3995 0.108898 CCTCAGCACTGGAACGAGAG 60.109 60.000 0.00 0.00 0.00 3.20
3207 3996 0.884514 CTCAGCACTGGAACGAGAGA 59.115 55.000 0.00 0.00 0.00 3.10
3208 3997 0.598562 TCAGCACTGGAACGAGAGAC 59.401 55.000 0.00 0.00 0.00 3.36
3209 3998 0.389166 CAGCACTGGAACGAGAGACC 60.389 60.000 0.00 0.00 0.00 3.85
3210 3999 1.444553 GCACTGGAACGAGAGACCG 60.445 63.158 0.00 0.00 34.91 4.79
3211 4000 1.957562 CACTGGAACGAGAGACCGT 59.042 57.895 0.00 0.00 45.64 4.83
3212 4001 1.162698 CACTGGAACGAGAGACCGTA 58.837 55.000 0.00 0.00 42.54 4.02
3213 4002 1.130749 CACTGGAACGAGAGACCGTAG 59.869 57.143 0.00 0.00 42.54 3.51
3226 4015 4.451150 CGTAGGCTGCCGCTTGGA 62.451 66.667 13.96 0.00 36.09 3.53
3227 4016 2.190578 GTAGGCTGCCGCTTGGAT 59.809 61.111 13.96 0.00 36.09 3.41
3228 4017 1.445942 GTAGGCTGCCGCTTGGATA 59.554 57.895 13.96 0.00 36.09 2.59
3229 4018 0.179056 GTAGGCTGCCGCTTGGATAA 60.179 55.000 13.96 0.00 36.09 1.75
3230 4019 0.179056 TAGGCTGCCGCTTGGATAAC 60.179 55.000 13.96 0.00 36.09 1.89
3231 4020 2.481471 GGCTGCCGCTTGGATAACC 61.481 63.158 1.35 0.00 36.09 2.85
3232 4021 1.748879 GCTGCCGCTTGGATAACCA 60.749 57.895 0.00 0.00 45.34 3.67
3233 4022 1.993369 GCTGCCGCTTGGATAACCAC 61.993 60.000 0.00 0.00 46.80 4.16
3234 4023 1.705337 CTGCCGCTTGGATAACCACG 61.705 60.000 0.00 0.00 46.80 4.94
3235 4024 1.448893 GCCGCTTGGATAACCACGA 60.449 57.895 0.00 0.00 46.80 4.35
3236 4025 1.429148 GCCGCTTGGATAACCACGAG 61.429 60.000 0.00 0.00 46.80 4.18
3237 4026 0.174845 CCGCTTGGATAACCACGAGA 59.825 55.000 0.00 0.00 46.80 4.04
3238 4027 1.202533 CCGCTTGGATAACCACGAGAT 60.203 52.381 0.00 0.00 46.80 2.75
3239 4028 2.035449 CCGCTTGGATAACCACGAGATA 59.965 50.000 0.00 0.00 46.80 1.98
3240 4029 3.491964 CCGCTTGGATAACCACGAGATAA 60.492 47.826 0.00 0.00 46.80 1.75
3241 4030 3.736252 CGCTTGGATAACCACGAGATAAG 59.264 47.826 0.00 0.00 46.80 1.73
3242 4031 4.694339 GCTTGGATAACCACGAGATAAGT 58.306 43.478 0.00 0.00 46.80 2.24
3243 4032 4.508124 GCTTGGATAACCACGAGATAAGTG 59.492 45.833 0.00 0.00 46.80 3.16
3244 4033 5.681437 GCTTGGATAACCACGAGATAAGTGA 60.681 44.000 0.00 0.00 46.80 3.41
3245 4034 5.515797 TGGATAACCACGAGATAAGTGAG 57.484 43.478 0.00 0.00 41.77 3.51
3246 4035 4.341235 TGGATAACCACGAGATAAGTGAGG 59.659 45.833 0.00 0.00 41.77 3.86
3247 4036 4.262079 GGATAACCACGAGATAAGTGAGGG 60.262 50.000 0.00 0.00 41.83 4.30
3248 4037 2.233305 ACCACGAGATAAGTGAGGGT 57.767 50.000 0.00 0.00 41.83 4.34
3249 4038 2.100989 ACCACGAGATAAGTGAGGGTC 58.899 52.381 0.00 0.00 41.83 4.46
3250 4039 1.409427 CCACGAGATAAGTGAGGGTCC 59.591 57.143 0.00 0.00 41.83 4.46
3251 4040 2.100197 CACGAGATAAGTGAGGGTCCA 58.900 52.381 0.00 0.00 41.83 4.02
3252 4041 2.496070 CACGAGATAAGTGAGGGTCCAA 59.504 50.000 0.00 0.00 41.83 3.53
3253 4042 2.761208 ACGAGATAAGTGAGGGTCCAAG 59.239 50.000 0.00 0.00 0.00 3.61
3254 4043 2.101582 CGAGATAAGTGAGGGTCCAAGG 59.898 54.545 0.00 0.00 0.00 3.61
3255 4044 3.108376 GAGATAAGTGAGGGTCCAAGGT 58.892 50.000 0.00 0.00 0.00 3.50
3256 4045 4.287552 GAGATAAGTGAGGGTCCAAGGTA 58.712 47.826 0.00 0.00 0.00 3.08
3257 4046 4.290942 AGATAAGTGAGGGTCCAAGGTAG 58.709 47.826 0.00 0.00 0.00 3.18
3258 4047 2.715763 AAGTGAGGGTCCAAGGTAGA 57.284 50.000 0.00 0.00 0.00 2.59
3259 4048 1.939980 AGTGAGGGTCCAAGGTAGAC 58.060 55.000 0.00 0.00 0.00 2.59
3260 4049 1.149288 AGTGAGGGTCCAAGGTAGACA 59.851 52.381 0.00 0.00 35.89 3.41
3261 4050 1.275573 GTGAGGGTCCAAGGTAGACAC 59.724 57.143 0.00 0.00 37.96 3.67
3262 4051 1.132977 TGAGGGTCCAAGGTAGACACA 60.133 52.381 0.00 0.00 40.27 3.72
3263 4052 1.975680 GAGGGTCCAAGGTAGACACAA 59.024 52.381 0.00 0.00 40.27 3.33
3264 4053 2.572104 GAGGGTCCAAGGTAGACACAAT 59.428 50.000 0.00 0.00 40.27 2.71
3265 4054 3.773119 GAGGGTCCAAGGTAGACACAATA 59.227 47.826 0.00 0.00 40.27 1.90
3266 4055 3.775316 AGGGTCCAAGGTAGACACAATAG 59.225 47.826 0.00 0.00 40.27 1.73
3267 4056 3.532542 GGTCCAAGGTAGACACAATAGC 58.467 50.000 0.00 0.00 35.89 2.97
3268 4057 3.532542 GTCCAAGGTAGACACAATAGCC 58.467 50.000 0.00 0.00 34.27 3.93
3269 4058 2.504175 TCCAAGGTAGACACAATAGCCC 59.496 50.000 0.00 0.00 0.00 5.19
3270 4059 2.550978 CAAGGTAGACACAATAGCCCG 58.449 52.381 0.00 0.00 0.00 6.13
3271 4060 2.154567 AGGTAGACACAATAGCCCGA 57.845 50.000 0.00 0.00 0.00 5.14
3272 4061 2.463752 AGGTAGACACAATAGCCCGAA 58.536 47.619 0.00 0.00 0.00 4.30
3273 4062 2.431057 AGGTAGACACAATAGCCCGAAG 59.569 50.000 0.00 0.00 0.00 3.79
3274 4063 2.167900 GGTAGACACAATAGCCCGAAGT 59.832 50.000 0.00 0.00 0.00 3.01
3275 4064 2.386661 AGACACAATAGCCCGAAGTG 57.613 50.000 0.00 0.00 36.34 3.16
3276 4065 1.066143 AGACACAATAGCCCGAAGTGG 60.066 52.381 0.00 0.00 34.65 4.00
3277 4066 0.981183 ACACAATAGCCCGAAGTGGA 59.019 50.000 0.00 0.00 42.00 4.02
3278 4067 1.066143 ACACAATAGCCCGAAGTGGAG 60.066 52.381 0.00 0.00 42.00 3.86
3279 4068 1.066143 CACAATAGCCCGAAGTGGAGT 60.066 52.381 0.00 0.00 42.00 3.85
3280 4069 1.066143 ACAATAGCCCGAAGTGGAGTG 60.066 52.381 0.00 0.00 42.00 3.51
3281 4070 1.207089 CAATAGCCCGAAGTGGAGTGA 59.793 52.381 0.00 0.00 42.00 3.41
3282 4071 0.824759 ATAGCCCGAAGTGGAGTGAC 59.175 55.000 0.00 0.00 42.00 3.67
3283 4072 1.592400 TAGCCCGAAGTGGAGTGACG 61.592 60.000 0.00 0.00 42.00 4.35
3284 4073 2.927580 GCCCGAAGTGGAGTGACGA 61.928 63.158 0.00 0.00 42.00 4.20
3285 4074 1.213013 CCCGAAGTGGAGTGACGAG 59.787 63.158 0.00 0.00 42.00 4.18
3286 4075 1.524863 CCCGAAGTGGAGTGACGAGT 61.525 60.000 0.00 0.00 42.00 4.18
3287 4076 0.387367 CCGAAGTGGAGTGACGAGTG 60.387 60.000 0.00 0.00 42.00 3.51
3288 4077 0.311165 CGAAGTGGAGTGACGAGTGT 59.689 55.000 0.00 0.00 0.00 3.55
3289 4078 1.663445 CGAAGTGGAGTGACGAGTGTC 60.663 57.143 0.00 0.00 45.71 3.67
3297 4086 2.433318 GACGAGTGTCAGGGCAGC 60.433 66.667 0.00 0.00 44.82 5.25
3298 4087 3.941657 GACGAGTGTCAGGGCAGCC 62.942 68.421 1.26 1.26 44.82 4.85
3299 4088 4.767255 CGAGTGTCAGGGCAGCCC 62.767 72.222 24.90 24.90 45.90 5.19
3316 4105 4.147449 CGCCCAGTCTGCATCGGA 62.147 66.667 0.00 0.00 0.00 4.55
3317 4106 2.202987 GCCCAGTCTGCATCGGAG 60.203 66.667 0.00 0.00 0.00 4.63
3318 4107 3.023949 GCCCAGTCTGCATCGGAGT 62.024 63.158 0.00 0.00 0.00 3.85
3319 4108 1.676678 GCCCAGTCTGCATCGGAGTA 61.677 60.000 0.00 0.00 0.00 2.59
3320 4109 0.387202 CCCAGTCTGCATCGGAGTAG 59.613 60.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 0.744414 CCGCCAACACCATGACCTAG 60.744 60.000 0.00 0.00 0.00 3.02
103 104 8.877864 TTGGACATAATTCACTTAAGTTCCAT 57.122 30.769 17.76 4.27 0.00 3.41
104 105 8.573035 GTTTGGACATAATTCACTTAAGTTCCA 58.427 33.333 14.55 14.55 0.00 3.53
126 127 4.774549 CGCGACGTAATTCACTTAAGTTTG 59.225 41.667 5.07 0.00 33.01 2.93
130 131 4.557276 AACGCGACGTAATTCACTTAAG 57.443 40.909 15.93 0.00 39.99 1.85
143 144 1.326576 AAATTCATGCAAACGCGACG 58.673 45.000 15.93 0.55 0.00 5.12
146 147 2.027926 GGCTAAAATTCATGCAAACGCG 59.972 45.455 3.53 3.53 0.00 6.01
148 149 2.598192 CCGGCTAAAATTCATGCAAACG 59.402 45.455 0.00 0.00 0.00 3.60
163 164 3.395639 CACAGTTCAACTAAACCGGCTA 58.604 45.455 0.00 0.00 0.00 3.93
164 165 2.218603 CACAGTTCAACTAAACCGGCT 58.781 47.619 0.00 0.00 0.00 5.52
175 176 6.814644 CCTCGTACATTTATACCACAGTTCAA 59.185 38.462 0.00 0.00 0.00 2.69
180 181 5.462398 GCTTCCTCGTACATTTATACCACAG 59.538 44.000 0.00 0.00 0.00 3.66
187 188 3.869246 CCAACGCTTCCTCGTACATTTAT 59.131 43.478 0.00 0.00 42.46 1.40
188 189 3.056678 TCCAACGCTTCCTCGTACATTTA 60.057 43.478 0.00 0.00 42.46 1.40
190 191 1.274167 TCCAACGCTTCCTCGTACATT 59.726 47.619 0.00 0.00 42.46 2.71
192 193 0.892755 ATCCAACGCTTCCTCGTACA 59.107 50.000 0.00 0.00 42.46 2.90
193 194 1.278238 CATCCAACGCTTCCTCGTAC 58.722 55.000 0.00 0.00 42.46 3.67
194 195 0.174845 CCATCCAACGCTTCCTCGTA 59.825 55.000 0.00 0.00 42.46 3.43
195 196 1.079127 CCATCCAACGCTTCCTCGT 60.079 57.895 0.00 0.00 45.58 4.18
196 197 2.464459 GCCATCCAACGCTTCCTCG 61.464 63.158 0.00 0.00 0.00 4.63
197 198 2.115291 GGCCATCCAACGCTTCCTC 61.115 63.158 0.00 0.00 0.00 3.71
198 199 2.044946 GGCCATCCAACGCTTCCT 60.045 61.111 0.00 0.00 0.00 3.36
199 200 3.508840 CGGCCATCCAACGCTTCC 61.509 66.667 2.24 0.00 0.00 3.46
200 201 3.508840 CCGGCCATCCAACGCTTC 61.509 66.667 2.24 0.00 0.00 3.86
227 228 2.240493 GGACCAATCCACGGATACAG 57.760 55.000 0.00 0.00 45.47 2.74
240 241 1.222387 CCGCGGATAAAGGGACCAA 59.778 57.895 24.07 0.00 0.00 3.67
249 250 0.172578 CGGCATCTATCCGCGGATAA 59.827 55.000 39.12 30.47 40.46 1.75
281 282 2.131183 GCACATCTCTAACGCTGATCC 58.869 52.381 0.00 0.00 0.00 3.36
283 284 3.533606 AAGCACATCTCTAACGCTGAT 57.466 42.857 0.00 0.00 32.14 2.90
288 289 7.114106 CAGTGATACATAAGCACATCTCTAACG 59.886 40.741 0.00 0.00 35.08 3.18
292 293 6.097412 TGTCAGTGATACATAAGCACATCTCT 59.903 38.462 0.00 0.00 35.08 3.10
299 300 8.785329 TTACAATTGTCAGTGATACATAAGCA 57.215 30.769 15.85 0.00 0.00 3.91
353 354 4.261072 CGGCAGATTTCATGAAAGATCCAG 60.261 45.833 24.17 14.40 33.32 3.86
359 360 2.749076 TCCACGGCAGATTTCATGAAAG 59.251 45.455 24.17 13.12 33.32 2.62
371 372 6.677781 TTATTTTAGAAGATTCCACGGCAG 57.322 37.500 0.00 0.00 0.00 4.85
448 1052 4.398044 ACGAGTGGTCAAGTTGATGTTTTT 59.602 37.500 9.18 0.00 0.00 1.94
499 1135 5.390613 GTGGTTGCACTTGACATGTAATAC 58.609 41.667 0.00 0.00 0.00 1.89
507 1143 1.454847 GGGGTGGTTGCACTTGACA 60.455 57.895 0.00 0.00 0.00 3.58
541 1180 2.430694 GTGAAAGCTTGGTTTTGGAGGT 59.569 45.455 0.00 0.00 0.00 3.85
564 1203 1.418637 AGAGTTTGACGCCCTTTGGTA 59.581 47.619 0.00 0.00 0.00 3.25
600 1239 4.561752 AGTTGGGACTATAGCATCTCCTT 58.438 43.478 0.00 0.00 33.32 3.36
617 1256 1.102154 TGGTGCTGTTTGTGAGTTGG 58.898 50.000 0.00 0.00 0.00 3.77
694 1333 7.088589 ACGACCTGTATTTTACGTGTATACT 57.911 36.000 0.00 0.00 32.93 2.12
782 1438 8.793592 GGTATTGGTATTCAGTGTTCTCTTTTT 58.206 33.333 0.00 0.00 0.00 1.94
789 1445 6.811253 TTGTGGTATTGGTATTCAGTGTTC 57.189 37.500 0.00 0.00 0.00 3.18
804 1460 2.883122 TAAGGGCCGTTTTGTGGTAT 57.117 45.000 17.16 0.00 0.00 2.73
805 1461 2.224818 ACATAAGGGCCGTTTTGTGGTA 60.225 45.455 26.61 5.37 0.00 3.25
806 1462 1.253100 CATAAGGGCCGTTTTGTGGT 58.747 50.000 17.16 0.00 0.00 4.16
817 1473 3.134804 ACTGGTCAGTGATACATAAGGGC 59.865 47.826 2.46 0.00 40.75 5.19
897 1565 2.346766 TGATGTGTCTTTGGTGCTGT 57.653 45.000 0.00 0.00 0.00 4.40
1149 1836 0.832135 TCTTGGCGAAGTGGAGGTCT 60.832 55.000 8.41 0.00 0.00 3.85
1317 2004 1.489481 TCTCTTGGGAGATGTCGCAT 58.511 50.000 10.52 0.00 44.51 4.73
1325 2012 1.819288 CGCAGTAGTTCTCTTGGGAGA 59.181 52.381 0.00 0.00 45.75 3.71
1332 2019 3.119316 CCATCTTGTCGCAGTAGTTCTCT 60.119 47.826 0.00 0.00 0.00 3.10
1727 2429 3.825143 ATGGCCTTGGCATTTGATTAC 57.175 42.857 14.04 0.00 46.61 1.89
1737 2462 1.375013 CACAAGCAATGGCCTTGGC 60.375 57.895 10.07 10.07 42.56 4.52
1777 2507 1.202463 GCCGTATGCATCAGTCAGACT 60.202 52.381 0.19 0.00 40.77 3.24
1796 2526 5.956642 TCAATTAGTTAATTTTGGACCGGC 58.043 37.500 0.00 0.00 33.88 6.13
1797 2527 6.525280 CGTTCAATTAGTTAATTTTGGACCGG 59.475 38.462 0.00 0.00 33.88 5.28
1798 2528 7.079475 ACGTTCAATTAGTTAATTTTGGACCG 58.921 34.615 0.00 0.00 33.88 4.79
1799 2529 8.696175 CAACGTTCAATTAGTTAATTTTGGACC 58.304 33.333 0.00 0.00 33.88 4.46
1813 2543 5.703592 AGCCTATGTTGACAACGTTCAATTA 59.296 36.000 17.81 0.00 37.80 1.40
1818 2548 4.034048 CCATAGCCTATGTTGACAACGTTC 59.966 45.833 17.81 8.30 34.36 3.95
2020 2758 7.711339 CCCTCTGTAAAGAAATATAAGAGCGTT 59.289 37.037 0.00 0.00 0.00 4.84
2021 2759 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
2022 2760 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
2023 2761 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
2030 2768 9.710818 AGTACATACTCCCTCTGTAAAGAAATA 57.289 33.333 0.00 0.00 0.00 1.40
2032 2770 8.064336 GAGTACATACTCCCTCTGTAAAGAAA 57.936 38.462 7.70 0.00 45.33 2.52
2033 2771 7.642082 GAGTACATACTCCCTCTGTAAAGAA 57.358 40.000 7.70 0.00 45.33 2.52
2047 2785 1.331138 GAGACAGCGCGAGTACATACT 59.669 52.381 12.10 0.00 39.71 2.12
2048 2786 1.331138 AGAGACAGCGCGAGTACATAC 59.669 52.381 12.10 0.00 0.00 2.39
2051 2789 1.664873 ATAGAGACAGCGCGAGTACA 58.335 50.000 12.10 0.00 0.00 2.90
2052 2790 2.096318 GGTATAGAGACAGCGCGAGTAC 60.096 54.545 12.10 5.54 0.00 2.73
2054 2792 0.945813 GGTATAGAGACAGCGCGAGT 59.054 55.000 12.10 7.48 0.00 4.18
2068 2831 8.978564 TGTTAAATTAGTTGTCGAACGGTATA 57.021 30.769 0.00 0.00 37.15 1.47
2071 2834 6.347888 CCATGTTAAATTAGTTGTCGAACGGT 60.348 38.462 0.00 0.00 37.15 4.83
2073 2836 6.595794 ACCATGTTAAATTAGTTGTCGAACG 58.404 36.000 0.00 0.00 37.15 3.95
2090 2853 3.956199 CCATCCAGCAGATTTACCATGTT 59.044 43.478 0.00 0.00 30.59 2.71
2104 2867 0.618458 TGTTCCCTGTACCATCCAGC 59.382 55.000 0.00 0.00 0.00 4.85
2109 2872 2.253610 TCGTCTTGTTCCCTGTACCAT 58.746 47.619 0.00 0.00 0.00 3.55
2240 3016 2.434359 GAGCCTGGCTAACGCGTT 60.434 61.111 29.27 29.27 39.88 4.84
2269 3045 1.081242 GACGAAACGGTAGCGGACA 60.081 57.895 19.72 0.00 0.00 4.02
2337 3115 5.487581 CATCGTTTCATTCGATCTTGACAG 58.512 41.667 0.00 0.00 44.49 3.51
2343 3121 3.543680 ACCCATCGTTTCATTCGATCT 57.456 42.857 0.00 0.00 44.49 2.75
2344 3122 5.119279 CAGATACCCATCGTTTCATTCGATC 59.881 44.000 0.00 0.00 44.49 3.69
2347 3125 4.119862 ACAGATACCCATCGTTTCATTCG 58.880 43.478 0.00 0.00 36.20 3.34
2348 3126 6.093495 TCAAACAGATACCCATCGTTTCATTC 59.907 38.462 0.00 0.00 36.58 2.67
2356 3139 4.503910 TGAACTCAAACAGATACCCATCG 58.496 43.478 0.00 0.00 36.20 3.84
2365 3148 2.595124 TCGTGCTGAACTCAAACAGA 57.405 45.000 0.00 0.00 36.38 3.41
2384 3167 8.088463 AGTAATTCAAGATCCATCACTCTCTT 57.912 34.615 0.00 0.00 0.00 2.85
2877 3666 1.340795 GGAGTTCCGGTCCAGTCTCTA 60.341 57.143 0.00 0.00 33.84 2.43
2878 3667 0.612453 GGAGTTCCGGTCCAGTCTCT 60.612 60.000 0.00 0.00 33.84 3.10
2879 3668 0.612453 AGGAGTTCCGGTCCAGTCTC 60.612 60.000 11.86 6.96 42.08 3.36
2880 3669 0.612453 GAGGAGTTCCGGTCCAGTCT 60.612 60.000 11.86 0.00 42.08 3.24
2881 3670 0.898789 TGAGGAGTTCCGGTCCAGTC 60.899 60.000 11.86 5.10 42.08 3.51
2882 3671 0.471211 TTGAGGAGTTCCGGTCCAGT 60.471 55.000 11.86 0.00 42.08 4.00
2883 3672 0.685097 TTTGAGGAGTTCCGGTCCAG 59.315 55.000 11.86 0.00 42.08 3.86
2884 3673 1.003118 CATTTGAGGAGTTCCGGTCCA 59.997 52.381 11.86 0.00 42.08 4.02
2885 3674 1.278127 TCATTTGAGGAGTTCCGGTCC 59.722 52.381 0.00 0.22 42.08 4.46
2886 3675 2.347731 GTCATTTGAGGAGTTCCGGTC 58.652 52.381 0.00 0.00 42.08 4.79
2887 3676 1.337823 CGTCATTTGAGGAGTTCCGGT 60.338 52.381 0.00 0.00 42.08 5.28
2888 3677 1.359848 CGTCATTTGAGGAGTTCCGG 58.640 55.000 0.00 0.00 42.08 5.14
2889 3678 0.721718 GCGTCATTTGAGGAGTTCCG 59.278 55.000 4.54 0.00 42.08 4.30
2890 3679 1.087501 GGCGTCATTTGAGGAGTTCC 58.912 55.000 4.54 0.00 32.08 3.62
2891 3680 0.721718 CGGCGTCATTTGAGGAGTTC 59.278 55.000 0.00 0.00 32.08 3.01
2892 3681 0.034896 ACGGCGTCATTTGAGGAGTT 59.965 50.000 6.77 0.00 32.08 3.01
2893 3682 0.892755 TACGGCGTCATTTGAGGAGT 59.107 50.000 19.21 5.94 32.08 3.85
2894 3683 1.560923 CTACGGCGTCATTTGAGGAG 58.439 55.000 19.21 0.00 32.08 3.69
2895 3684 0.174845 CCTACGGCGTCATTTGAGGA 59.825 55.000 19.21 0.00 32.08 3.71
2896 3685 1.429148 GCCTACGGCGTCATTTGAGG 61.429 60.000 19.21 18.23 39.62 3.86
2897 3686 2.006772 GCCTACGGCGTCATTTGAG 58.993 57.895 19.21 7.10 39.62 3.02
2898 3687 4.195308 GCCTACGGCGTCATTTGA 57.805 55.556 19.21 0.00 39.62 2.69
2908 3697 2.438434 CCAAGGGCTTGCCTACGG 60.438 66.667 11.71 5.61 39.16 4.02
2909 3698 1.745489 GACCAAGGGCTTGCCTACG 60.745 63.158 11.71 0.25 39.16 3.51
2910 3699 0.034089 ATGACCAAGGGCTTGCCTAC 60.034 55.000 11.71 0.00 39.16 3.18
2911 3700 0.034186 CATGACCAAGGGCTTGCCTA 60.034 55.000 11.71 0.00 39.16 3.93
2912 3701 1.304713 CATGACCAAGGGCTTGCCT 60.305 57.895 11.71 0.00 39.16 4.75
2913 3702 0.685458 ATCATGACCAAGGGCTTGCC 60.685 55.000 0.00 2.49 39.16 4.52
2914 3703 2.057137 TATCATGACCAAGGGCTTGC 57.943 50.000 0.00 0.00 39.16 4.01
2915 3704 2.810274 CGATATCATGACCAAGGGCTTG 59.190 50.000 0.00 1.51 40.13 4.01
2916 3705 2.224621 CCGATATCATGACCAAGGGCTT 60.225 50.000 0.00 0.00 0.00 4.35
2917 3706 1.349026 CCGATATCATGACCAAGGGCT 59.651 52.381 0.00 0.00 0.00 5.19
2918 3707 1.813513 CCGATATCATGACCAAGGGC 58.186 55.000 0.00 0.00 0.00 5.19
2919 3708 1.072173 TGCCGATATCATGACCAAGGG 59.928 52.381 0.00 0.00 0.00 3.95
2920 3709 2.549064 TGCCGATATCATGACCAAGG 57.451 50.000 0.00 0.81 0.00 3.61
2921 3710 5.217393 CAATTTGCCGATATCATGACCAAG 58.783 41.667 0.00 0.00 0.00 3.61
2922 3711 4.644234 ACAATTTGCCGATATCATGACCAA 59.356 37.500 0.00 0.00 0.00 3.67
2923 3712 4.206375 ACAATTTGCCGATATCATGACCA 58.794 39.130 0.00 0.00 0.00 4.02
2924 3713 4.836125 ACAATTTGCCGATATCATGACC 57.164 40.909 0.00 0.00 0.00 4.02
2925 3714 4.977963 CCAACAATTTGCCGATATCATGAC 59.022 41.667 0.00 0.00 0.00 3.06
2926 3715 4.037803 CCCAACAATTTGCCGATATCATGA 59.962 41.667 0.00 0.00 0.00 3.07
2927 3716 4.037803 TCCCAACAATTTGCCGATATCATG 59.962 41.667 3.12 0.00 0.00 3.07
2928 3717 4.214310 TCCCAACAATTTGCCGATATCAT 58.786 39.130 3.12 0.00 0.00 2.45
2929 3718 3.625853 TCCCAACAATTTGCCGATATCA 58.374 40.909 3.12 0.00 0.00 2.15
2930 3719 4.097892 ACTTCCCAACAATTTGCCGATATC 59.902 41.667 0.00 0.00 0.00 1.63
2931 3720 4.023291 ACTTCCCAACAATTTGCCGATAT 58.977 39.130 0.00 0.00 0.00 1.63
2932 3721 3.426615 ACTTCCCAACAATTTGCCGATA 58.573 40.909 0.00 0.00 0.00 2.92
2933 3722 2.247358 ACTTCCCAACAATTTGCCGAT 58.753 42.857 0.00 0.00 0.00 4.18
2934 3723 1.698506 ACTTCCCAACAATTTGCCGA 58.301 45.000 0.00 0.00 0.00 5.54
2935 3724 2.094752 CCTACTTCCCAACAATTTGCCG 60.095 50.000 0.00 0.00 0.00 5.69
2936 3725 2.233676 CCCTACTTCCCAACAATTTGCC 59.766 50.000 0.00 0.00 0.00 4.52
2937 3726 3.056821 GTCCCTACTTCCCAACAATTTGC 60.057 47.826 0.00 0.00 0.00 3.68
2938 3727 3.190535 CGTCCCTACTTCCCAACAATTTG 59.809 47.826 0.00 0.00 0.00 2.32
2939 3728 3.181437 ACGTCCCTACTTCCCAACAATTT 60.181 43.478 0.00 0.00 0.00 1.82
2940 3729 2.374170 ACGTCCCTACTTCCCAACAATT 59.626 45.455 0.00 0.00 0.00 2.32
2941 3730 1.982958 ACGTCCCTACTTCCCAACAAT 59.017 47.619 0.00 0.00 0.00 2.71
2942 3731 1.071071 CACGTCCCTACTTCCCAACAA 59.929 52.381 0.00 0.00 0.00 2.83
2943 3732 0.682852 CACGTCCCTACTTCCCAACA 59.317 55.000 0.00 0.00 0.00 3.33
2944 3733 0.683412 ACACGTCCCTACTTCCCAAC 59.317 55.000 0.00 0.00 0.00 3.77
2945 3734 2.307496 TACACGTCCCTACTTCCCAA 57.693 50.000 0.00 0.00 0.00 4.12
2946 3735 2.307496 TTACACGTCCCTACTTCCCA 57.693 50.000 0.00 0.00 0.00 4.37
2947 3736 3.244181 TGTTTTACACGTCCCTACTTCCC 60.244 47.826 0.00 0.00 0.00 3.97
2948 3737 3.742882 GTGTTTTACACGTCCCTACTTCC 59.257 47.826 0.00 0.00 39.53 3.46
2949 3738 4.979564 GTGTTTTACACGTCCCTACTTC 57.020 45.455 0.00 0.00 39.53 3.01
2960 3749 4.688511 TGGCCATATTCGTGTTTTACAC 57.311 40.909 0.00 0.00 45.26 2.90
2961 3750 4.156922 CCTTGGCCATATTCGTGTTTTACA 59.843 41.667 6.09 0.00 0.00 2.41
2962 3751 4.439563 CCCTTGGCCATATTCGTGTTTTAC 60.440 45.833 6.09 0.00 0.00 2.01
2963 3752 3.697045 CCCTTGGCCATATTCGTGTTTTA 59.303 43.478 6.09 0.00 0.00 1.52
2964 3753 2.495669 CCCTTGGCCATATTCGTGTTTT 59.504 45.455 6.09 0.00 0.00 2.43
2965 3754 2.099405 CCCTTGGCCATATTCGTGTTT 58.901 47.619 6.09 0.00 0.00 2.83
2966 3755 1.762708 CCCTTGGCCATATTCGTGTT 58.237 50.000 6.09 0.00 0.00 3.32
2967 3756 0.751643 GCCCTTGGCCATATTCGTGT 60.752 55.000 6.09 0.00 44.06 4.49
2968 3757 2.032981 GCCCTTGGCCATATTCGTG 58.967 57.895 6.09 0.00 44.06 4.35
2969 3758 4.579127 GCCCTTGGCCATATTCGT 57.421 55.556 6.09 0.00 44.06 3.85
2979 3768 1.230212 GGGAATAGGTGGCCCTTGG 59.770 63.158 0.00 0.00 42.66 3.61
2980 3769 1.152963 CGGGAATAGGTGGCCCTTG 60.153 63.158 0.00 0.00 42.66 3.61
2981 3770 0.917333 TTCGGGAATAGGTGGCCCTT 60.917 55.000 0.00 0.00 42.66 3.95
2982 3771 1.307517 TTCGGGAATAGGTGGCCCT 60.308 57.895 0.00 0.00 45.51 5.19
2983 3772 1.153025 GTTCGGGAATAGGTGGCCC 60.153 63.158 0.00 0.00 38.53 5.80
2984 3773 0.034863 TTGTTCGGGAATAGGTGGCC 60.035 55.000 0.00 0.00 0.00 5.36
2985 3774 1.828979 TTTGTTCGGGAATAGGTGGC 58.171 50.000 0.00 0.00 0.00 5.01
2986 3775 4.013728 TCATTTTGTTCGGGAATAGGTGG 58.986 43.478 0.00 0.00 0.00 4.61
2987 3776 5.637006 TTCATTTTGTTCGGGAATAGGTG 57.363 39.130 0.00 0.00 0.00 4.00
2988 3777 7.230712 GGATATTCATTTTGTTCGGGAATAGGT 59.769 37.037 0.00 0.00 34.88 3.08
2989 3778 7.230510 TGGATATTCATTTTGTTCGGGAATAGG 59.769 37.037 0.00 0.00 34.88 2.57
2990 3779 8.165239 TGGATATTCATTTTGTTCGGGAATAG 57.835 34.615 0.00 0.00 34.88 1.73
2991 3780 8.410141 GTTGGATATTCATTTTGTTCGGGAATA 58.590 33.333 0.00 0.00 35.59 1.75
2992 3781 7.124147 AGTTGGATATTCATTTTGTTCGGGAAT 59.876 33.333 0.00 0.00 33.22 3.01
2993 3782 6.435904 AGTTGGATATTCATTTTGTTCGGGAA 59.564 34.615 0.00 0.00 0.00 3.97
2994 3783 5.949354 AGTTGGATATTCATTTTGTTCGGGA 59.051 36.000 0.00 0.00 0.00 5.14
2995 3784 6.127758 TGAGTTGGATATTCATTTTGTTCGGG 60.128 38.462 0.00 0.00 0.00 5.14
2996 3785 6.851609 TGAGTTGGATATTCATTTTGTTCGG 58.148 36.000 0.00 0.00 0.00 4.30
2997 3786 8.915871 ATTGAGTTGGATATTCATTTTGTTCG 57.084 30.769 0.00 0.00 0.00 3.95
3000 3789 9.754382 GCATATTGAGTTGGATATTCATTTTGT 57.246 29.630 0.00 0.00 0.00 2.83
3001 3790 9.976511 AGCATATTGAGTTGGATATTCATTTTG 57.023 29.630 0.00 0.00 0.00 2.44
3003 3792 9.976511 CAAGCATATTGAGTTGGATATTCATTT 57.023 29.630 0.00 0.00 0.00 2.32
3004 3793 8.582437 CCAAGCATATTGAGTTGGATATTCATT 58.418 33.333 0.00 0.00 41.82 2.57
3005 3794 7.727186 ACCAAGCATATTGAGTTGGATATTCAT 59.273 33.333 6.95 0.00 41.82 2.57
3006 3795 7.062322 ACCAAGCATATTGAGTTGGATATTCA 58.938 34.615 6.95 0.00 41.82 2.57
3007 3796 7.308830 GGACCAAGCATATTGAGTTGGATATTC 60.309 40.741 6.95 0.00 41.82 1.75
3008 3797 6.491403 GGACCAAGCATATTGAGTTGGATATT 59.509 38.462 6.95 0.00 41.82 1.28
3009 3798 6.006449 GGACCAAGCATATTGAGTTGGATAT 58.994 40.000 6.95 0.00 41.82 1.63
3010 3799 5.376625 GGACCAAGCATATTGAGTTGGATA 58.623 41.667 6.95 0.00 41.82 2.59
3011 3800 4.210331 GGACCAAGCATATTGAGTTGGAT 58.790 43.478 6.95 0.00 41.82 3.41
3012 3801 3.620488 GGACCAAGCATATTGAGTTGGA 58.380 45.455 6.95 0.00 41.82 3.53
3013 3802 2.355756 CGGACCAAGCATATTGAGTTGG 59.644 50.000 0.00 0.00 44.34 3.77
3014 3803 3.009723 ACGGACCAAGCATATTGAGTTG 58.990 45.455 0.00 0.00 0.00 3.16
3015 3804 3.270877 GACGGACCAAGCATATTGAGTT 58.729 45.455 0.00 0.00 0.00 3.01
3016 3805 2.738643 CGACGGACCAAGCATATTGAGT 60.739 50.000 0.00 0.00 0.00 3.41
3017 3806 1.860950 CGACGGACCAAGCATATTGAG 59.139 52.381 0.00 0.00 0.00 3.02
3018 3807 1.478916 TCGACGGACCAAGCATATTGA 59.521 47.619 0.00 0.00 0.00 2.57
3019 3808 1.934589 TCGACGGACCAAGCATATTG 58.065 50.000 0.00 0.00 0.00 1.90
3020 3809 2.102420 TCATCGACGGACCAAGCATATT 59.898 45.455 0.00 0.00 0.00 1.28
3021 3810 1.686587 TCATCGACGGACCAAGCATAT 59.313 47.619 0.00 0.00 0.00 1.78
3022 3811 1.107945 TCATCGACGGACCAAGCATA 58.892 50.000 0.00 0.00 0.00 3.14
3023 3812 0.465705 ATCATCGACGGACCAAGCAT 59.534 50.000 0.00 0.00 0.00 3.79
3024 3813 0.460109 CATCATCGACGGACCAAGCA 60.460 55.000 0.00 0.00 0.00 3.91
3025 3814 1.766143 GCATCATCGACGGACCAAGC 61.766 60.000 0.00 0.00 0.00 4.01
3026 3815 0.460109 TGCATCATCGACGGACCAAG 60.460 55.000 0.00 0.00 0.00 3.61
3027 3816 0.739462 GTGCATCATCGACGGACCAA 60.739 55.000 0.00 0.00 0.00 3.67
3028 3817 1.153647 GTGCATCATCGACGGACCA 60.154 57.895 0.00 0.00 0.00 4.02
3029 3818 1.883084 GGTGCATCATCGACGGACC 60.883 63.158 0.00 0.00 0.00 4.46
3030 3819 2.230940 CGGTGCATCATCGACGGAC 61.231 63.158 0.00 0.00 40.81 4.79
3031 3820 2.104132 CGGTGCATCATCGACGGA 59.896 61.111 0.00 0.00 40.81 4.69
3032 3821 2.961721 CCGGTGCATCATCGACGG 60.962 66.667 0.00 0.00 40.81 4.79
3033 3822 2.961721 CCCGGTGCATCATCGACG 60.962 66.667 0.00 0.00 40.81 5.12
3034 3823 0.179094 TAACCCGGTGCATCATCGAC 60.179 55.000 0.00 0.00 40.81 4.20
3035 3824 0.104120 CTAACCCGGTGCATCATCGA 59.896 55.000 0.00 0.00 40.81 3.59
3036 3825 1.498865 GCTAACCCGGTGCATCATCG 61.499 60.000 0.00 0.00 37.76 3.84
3037 3826 1.498865 CGCTAACCCGGTGCATCATC 61.499 60.000 0.00 0.00 0.00 2.92
3038 3827 1.523711 CGCTAACCCGGTGCATCAT 60.524 57.895 0.00 0.00 0.00 2.45
3039 3828 2.125310 CGCTAACCCGGTGCATCA 60.125 61.111 0.00 0.00 0.00 3.07
3040 3829 2.895372 CCGCTAACCCGGTGCATC 60.895 66.667 0.00 0.00 43.24 3.91
3047 3836 0.465097 TCTACCTCTCCGCTAACCCG 60.465 60.000 0.00 0.00 0.00 5.28
3048 3837 1.031235 GTCTACCTCTCCGCTAACCC 58.969 60.000 0.00 0.00 0.00 4.11
3049 3838 1.031235 GGTCTACCTCTCCGCTAACC 58.969 60.000 0.00 0.00 0.00 2.85
3050 3839 0.662085 CGGTCTACCTCTCCGCTAAC 59.338 60.000 0.00 0.00 37.90 2.34
3051 3840 3.091318 CGGTCTACCTCTCCGCTAA 57.909 57.895 0.00 0.00 37.90 3.09
3052 3841 4.872357 CGGTCTACCTCTCCGCTA 57.128 61.111 0.00 0.00 37.90 4.26
3055 3844 3.584052 CGGCGGTCTACCTCTCCG 61.584 72.222 0.00 9.03 45.94 4.63
3056 3845 2.124403 TCGGCGGTCTACCTCTCC 60.124 66.667 7.21 0.00 0.00 3.71
3057 3846 1.153208 TCTCGGCGGTCTACCTCTC 60.153 63.158 7.21 0.00 0.00 3.20
3058 3847 1.451747 GTCTCGGCGGTCTACCTCT 60.452 63.158 7.21 0.00 0.00 3.69
3059 3848 2.821688 CGTCTCGGCGGTCTACCTC 61.822 68.421 7.21 0.00 0.00 3.85
3060 3849 2.823147 CGTCTCGGCGGTCTACCT 60.823 66.667 7.21 0.00 0.00 3.08
3061 3850 2.694760 AACGTCTCGGCGGTCTACC 61.695 63.158 7.21 0.00 35.98 3.18
3062 3851 1.513586 CAACGTCTCGGCGGTCTAC 60.514 63.158 7.21 0.00 35.98 2.59
3063 3852 1.915614 GACAACGTCTCGGCGGTCTA 61.916 60.000 7.21 0.00 35.98 2.59
3064 3853 3.264866 GACAACGTCTCGGCGGTCT 62.265 63.158 7.21 0.00 35.98 3.85
3065 3854 2.804090 GACAACGTCTCGGCGGTC 60.804 66.667 7.21 0.04 35.98 4.79
3066 3855 4.695231 CGACAACGTCTCGGCGGT 62.695 66.667 7.21 0.00 35.98 5.68
3069 3858 2.791396 TACTGCGACAACGTCTCGGC 62.791 60.000 15.17 6.26 41.98 5.54
3070 3859 0.793478 CTACTGCGACAACGTCTCGG 60.793 60.000 15.17 4.62 41.98 4.63
3071 3860 0.165295 TCTACTGCGACAACGTCTCG 59.835 55.000 10.45 10.45 41.98 4.04
3072 3861 1.604396 GTCTACTGCGACAACGTCTC 58.396 55.000 0.00 0.00 41.98 3.36
3073 3862 0.240411 GGTCTACTGCGACAACGTCT 59.760 55.000 0.00 0.00 41.98 4.18
3074 3863 0.039798 TGGTCTACTGCGACAACGTC 60.040 55.000 0.00 0.00 41.98 4.34
3075 3864 0.318445 GTGGTCTACTGCGACAACGT 60.318 55.000 0.00 0.00 41.98 3.99
3076 3865 1.007336 GGTGGTCTACTGCGACAACG 61.007 60.000 0.00 0.00 38.48 4.10
3077 3866 1.007336 CGGTGGTCTACTGCGACAAC 61.007 60.000 0.00 0.00 37.17 3.32
3078 3867 1.287815 CGGTGGTCTACTGCGACAA 59.712 57.895 0.00 0.00 35.63 3.18
3079 3868 1.900016 ACGGTGGTCTACTGCGACA 60.900 57.895 0.00 0.00 39.39 4.35
3080 3869 1.443872 CACGGTGGTCTACTGCGAC 60.444 63.158 0.00 0.00 39.39 5.19
3081 3870 2.632544 CCACGGTGGTCTACTGCGA 61.633 63.158 19.15 0.00 39.39 5.10
3082 3871 2.126071 CCACGGTGGTCTACTGCG 60.126 66.667 19.15 0.00 39.39 5.18
3083 3872 2.434359 GCCACGGTGGTCTACTGC 60.434 66.667 26.86 8.18 40.46 4.40
3084 3873 0.740868 CATGCCACGGTGGTCTACTG 60.741 60.000 26.86 13.73 40.46 2.74
3085 3874 1.596934 CATGCCACGGTGGTCTACT 59.403 57.895 26.86 6.20 40.46 2.57
3086 3875 1.449601 CCATGCCACGGTGGTCTAC 60.450 63.158 26.86 11.79 40.46 2.59
3087 3876 1.916273 ACCATGCCACGGTGGTCTA 60.916 57.895 26.86 14.82 45.30 2.59
3088 3877 3.249189 ACCATGCCACGGTGGTCT 61.249 61.111 26.86 12.74 45.30 3.85
3091 3880 2.282110 TTGACCATGCCACGGTGG 60.282 61.111 22.87 22.87 41.55 4.61
3092 3881 1.855213 CTGTTGACCATGCCACGGTG 61.855 60.000 0.00 0.00 36.69 4.94
3093 3882 1.600636 CTGTTGACCATGCCACGGT 60.601 57.895 0.00 0.00 40.30 4.83
3094 3883 2.334946 CCTGTTGACCATGCCACGG 61.335 63.158 0.00 0.00 0.00 4.94
3095 3884 1.302431 TCCTGTTGACCATGCCACG 60.302 57.895 0.00 0.00 0.00 4.94
3096 3885 0.537143 TGTCCTGTTGACCATGCCAC 60.537 55.000 0.00 0.00 43.78 5.01
3097 3886 0.184692 TTGTCCTGTTGACCATGCCA 59.815 50.000 0.00 0.00 43.78 4.92
3098 3887 0.883833 CTTGTCCTGTTGACCATGCC 59.116 55.000 0.00 0.00 43.78 4.40
3099 3888 1.808945 CTCTTGTCCTGTTGACCATGC 59.191 52.381 0.00 0.00 43.78 4.06
3100 3889 3.332919 CTCTCTTGTCCTGTTGACCATG 58.667 50.000 0.00 0.00 43.78 3.66
3101 3890 2.289945 GCTCTCTTGTCCTGTTGACCAT 60.290 50.000 0.00 0.00 43.78 3.55
3102 3891 1.070758 GCTCTCTTGTCCTGTTGACCA 59.929 52.381 0.00 0.00 43.78 4.02
3103 3892 1.346068 AGCTCTCTTGTCCTGTTGACC 59.654 52.381 0.00 0.00 43.78 4.02
3104 3893 2.611722 GGAGCTCTCTTGTCCTGTTGAC 60.612 54.545 14.64 0.00 44.72 3.18
3105 3894 1.620819 GGAGCTCTCTTGTCCTGTTGA 59.379 52.381 14.64 0.00 0.00 3.18
3106 3895 1.622811 AGGAGCTCTCTTGTCCTGTTG 59.377 52.381 14.64 0.00 39.36 3.33
3107 3896 2.022718 AGGAGCTCTCTTGTCCTGTT 57.977 50.000 14.64 0.00 39.36 3.16
3108 3897 3.784429 AGGAGCTCTCTTGTCCTGT 57.216 52.632 14.64 0.00 39.36 4.00
3110 3899 2.178580 CTTCAGGAGCTCTCTTGTCCT 58.821 52.381 14.64 0.00 41.68 3.85
3111 3900 2.671130 CTTCAGGAGCTCTCTTGTCC 57.329 55.000 14.64 0.00 37.84 4.02
3122 3911 2.793160 TTCGCCAGCTGCTTCAGGAG 62.793 60.000 8.66 5.42 38.05 3.69
3123 3912 2.793160 CTTCGCCAGCTGCTTCAGGA 62.793 60.000 8.66 0.00 38.05 3.86
3124 3913 2.359107 TTCGCCAGCTGCTTCAGG 60.359 61.111 8.66 0.00 38.05 3.86
3125 3914 3.036783 GCTTCGCCAGCTGCTTCAG 62.037 63.158 8.66 2.47 46.27 3.02
3126 3915 3.052082 GCTTCGCCAGCTGCTTCA 61.052 61.111 8.66 0.00 46.27 3.02
3137 3926 2.853914 GAGTGTTCGTGGCTTCGC 59.146 61.111 0.00 0.00 0.00 4.70
3138 3927 2.372690 CCGAGTGTTCGTGGCTTCG 61.373 63.158 0.00 0.00 45.28 3.79
3139 3928 2.668280 GCCGAGTGTTCGTGGCTTC 61.668 63.158 0.00 0.00 45.28 3.86
3140 3929 2.665185 GCCGAGTGTTCGTGGCTT 60.665 61.111 0.00 0.00 45.28 4.35
3143 3932 3.103911 GTCGCCGAGTGTTCGTGG 61.104 66.667 0.00 0.00 45.28 4.94
3144 3933 3.458579 CGTCGCCGAGTGTTCGTG 61.459 66.667 0.00 0.00 45.28 4.35
3145 3934 4.695231 CCGTCGCCGAGTGTTCGT 62.695 66.667 0.00 0.00 45.28 3.85
3163 3952 1.739929 TATCGTGCAGTGGCCAACG 60.740 57.895 19.37 19.37 39.84 4.10
3164 3953 0.673644 AGTATCGTGCAGTGGCCAAC 60.674 55.000 7.24 0.00 40.13 3.77
3165 3954 0.391130 GAGTATCGTGCAGTGGCCAA 60.391 55.000 7.24 0.00 40.13 4.52
3166 3955 1.218047 GAGTATCGTGCAGTGGCCA 59.782 57.895 0.00 0.00 40.13 5.36
3167 3956 0.807667 CTGAGTATCGTGCAGTGGCC 60.808 60.000 0.00 0.00 38.61 5.36
3168 3957 1.424493 GCTGAGTATCGTGCAGTGGC 61.424 60.000 0.00 0.00 38.61 5.01
3169 3958 0.807667 GGCTGAGTATCGTGCAGTGG 60.808 60.000 0.00 0.00 38.62 4.00
3170 3959 0.174389 AGGCTGAGTATCGTGCAGTG 59.826 55.000 0.00 0.00 38.62 3.66
3171 3960 0.457851 GAGGCTGAGTATCGTGCAGT 59.542 55.000 0.00 0.00 38.62 4.40
3172 3961 0.457443 TGAGGCTGAGTATCGTGCAG 59.543 55.000 0.00 0.00 38.62 4.41
3173 3962 0.457443 CTGAGGCTGAGTATCGTGCA 59.543 55.000 0.00 0.00 38.62 4.57
3174 3963 0.873743 GCTGAGGCTGAGTATCGTGC 60.874 60.000 2.20 0.00 38.61 5.34
3175 3964 0.457443 TGCTGAGGCTGAGTATCGTG 59.543 55.000 2.20 0.00 39.59 4.35
3176 3965 0.457851 GTGCTGAGGCTGAGTATCGT 59.542 55.000 2.20 0.00 39.59 3.73
3177 3966 0.743688 AGTGCTGAGGCTGAGTATCG 59.256 55.000 2.20 0.00 39.59 2.92
3178 3967 1.202510 CCAGTGCTGAGGCTGAGTATC 60.203 57.143 2.20 0.00 39.59 2.24
3179 3968 0.829333 CCAGTGCTGAGGCTGAGTAT 59.171 55.000 2.20 0.00 39.59 2.12
3180 3969 0.251787 TCCAGTGCTGAGGCTGAGTA 60.252 55.000 2.20 0.00 39.59 2.59
3181 3970 1.123861 TTCCAGTGCTGAGGCTGAGT 61.124 55.000 2.20 0.00 39.59 3.41
3182 3971 0.673022 GTTCCAGTGCTGAGGCTGAG 60.673 60.000 0.00 0.00 39.59 3.35
3183 3972 1.372683 GTTCCAGTGCTGAGGCTGA 59.627 57.895 0.00 0.00 39.59 4.26
3184 3973 2.031516 CGTTCCAGTGCTGAGGCTG 61.032 63.158 0.00 0.00 39.59 4.85
3185 3974 2.164865 CTCGTTCCAGTGCTGAGGCT 62.165 60.000 0.02 0.00 39.59 4.58
3186 3975 1.739562 CTCGTTCCAGTGCTGAGGC 60.740 63.158 0.02 0.00 39.26 4.70
3187 3976 0.108898 CTCTCGTTCCAGTGCTGAGG 60.109 60.000 0.02 0.00 0.00 3.86
3188 3977 0.884514 TCTCTCGTTCCAGTGCTGAG 59.115 55.000 0.02 0.00 0.00 3.35
3189 3978 0.598562 GTCTCTCGTTCCAGTGCTGA 59.401 55.000 0.02 0.00 0.00 4.26
3190 3979 0.389166 GGTCTCTCGTTCCAGTGCTG 60.389 60.000 0.00 0.00 0.00 4.41
3191 3980 1.867919 CGGTCTCTCGTTCCAGTGCT 61.868 60.000 0.00 0.00 0.00 4.40
3192 3981 1.444553 CGGTCTCTCGTTCCAGTGC 60.445 63.158 0.00 0.00 0.00 4.40
3193 3982 1.130749 CTACGGTCTCTCGTTCCAGTG 59.869 57.143 0.00 0.00 43.59 3.66
3194 3983 1.451067 CTACGGTCTCTCGTTCCAGT 58.549 55.000 0.00 0.00 43.59 4.00
3195 3984 0.733729 CCTACGGTCTCTCGTTCCAG 59.266 60.000 0.00 0.00 43.59 3.86
3196 3985 1.310933 GCCTACGGTCTCTCGTTCCA 61.311 60.000 0.00 0.00 43.59 3.53
3197 3986 1.031029 AGCCTACGGTCTCTCGTTCC 61.031 60.000 0.00 0.00 43.59 3.62
3198 3987 0.099082 CAGCCTACGGTCTCTCGTTC 59.901 60.000 0.00 0.00 43.59 3.95
3199 3988 1.935327 GCAGCCTACGGTCTCTCGTT 61.935 60.000 0.00 0.00 43.59 3.85
3200 3989 2.408241 GCAGCCTACGGTCTCTCGT 61.408 63.158 0.00 0.00 45.88 4.18
3201 3990 2.409651 GCAGCCTACGGTCTCTCG 59.590 66.667 0.00 0.00 0.00 4.04
3202 3991 2.809010 GGCAGCCTACGGTCTCTC 59.191 66.667 3.29 0.00 0.00 3.20
3203 3992 3.141488 CGGCAGCCTACGGTCTCT 61.141 66.667 10.54 0.00 0.00 3.10
3204 3993 4.874977 GCGGCAGCCTACGGTCTC 62.875 72.222 10.54 0.00 37.42 3.36
3206 3995 4.452733 AAGCGGCAGCCTACGGTC 62.453 66.667 10.54 0.00 46.67 4.79
3207 3996 4.760047 CAAGCGGCAGCCTACGGT 62.760 66.667 10.54 0.00 46.67 4.83
3209 3998 2.363711 TATCCAAGCGGCAGCCTACG 62.364 60.000 10.54 0.00 46.67 3.51
3210 3999 0.179056 TTATCCAAGCGGCAGCCTAC 60.179 55.000 10.54 0.88 46.67 3.18
3211 4000 0.179056 GTTATCCAAGCGGCAGCCTA 60.179 55.000 10.54 0.00 46.67 3.93
3212 4001 1.452108 GTTATCCAAGCGGCAGCCT 60.452 57.895 10.54 0.00 46.67 4.58
3213 4002 2.481471 GGTTATCCAAGCGGCAGCC 61.481 63.158 4.82 0.00 46.67 4.85
3214 4003 1.748879 TGGTTATCCAAGCGGCAGC 60.749 57.895 0.00 0.00 41.25 5.25
3215 4004 1.705337 CGTGGTTATCCAAGCGGCAG 61.705 60.000 1.45 0.00 46.15 4.85
3216 4005 1.743623 CGTGGTTATCCAAGCGGCA 60.744 57.895 1.45 0.00 46.15 5.69
3217 4006 1.429148 CTCGTGGTTATCCAAGCGGC 61.429 60.000 1.22 0.00 46.15 6.53
3218 4007 0.174845 TCTCGTGGTTATCCAAGCGG 59.825 55.000 1.22 0.00 46.15 5.52
3219 4008 2.225068 ATCTCGTGGTTATCCAAGCG 57.775 50.000 1.22 0.00 46.15 4.68
3220 4009 4.508124 CACTTATCTCGTGGTTATCCAAGC 59.492 45.833 1.22 0.00 46.15 4.01
3221 4010 5.902681 TCACTTATCTCGTGGTTATCCAAG 58.097 41.667 0.00 0.00 46.15 3.61
3222 4011 5.163447 CCTCACTTATCTCGTGGTTATCCAA 60.163 44.000 0.00 0.00 46.15 3.53
3223 4012 4.341235 CCTCACTTATCTCGTGGTTATCCA 59.659 45.833 0.00 0.00 42.05 3.41
3224 4013 4.262079 CCCTCACTTATCTCGTGGTTATCC 60.262 50.000 0.00 0.00 33.31 2.59
3225 4014 4.341520 ACCCTCACTTATCTCGTGGTTATC 59.658 45.833 0.00 0.00 33.31 1.75
3226 4015 4.287552 ACCCTCACTTATCTCGTGGTTAT 58.712 43.478 0.00 0.00 33.31 1.89
3227 4016 3.698040 GACCCTCACTTATCTCGTGGTTA 59.302 47.826 0.00 0.00 33.31 2.85
3228 4017 2.496470 GACCCTCACTTATCTCGTGGTT 59.504 50.000 0.00 0.00 33.31 3.67
3229 4018 2.100989 GACCCTCACTTATCTCGTGGT 58.899 52.381 0.00 0.00 33.31 4.16
3230 4019 1.409427 GGACCCTCACTTATCTCGTGG 59.591 57.143 0.00 0.00 33.31 4.94
3231 4020 2.100197 TGGACCCTCACTTATCTCGTG 58.900 52.381 0.00 0.00 0.00 4.35
3232 4021 2.526888 TGGACCCTCACTTATCTCGT 57.473 50.000 0.00 0.00 0.00 4.18
3233 4022 2.101582 CCTTGGACCCTCACTTATCTCG 59.898 54.545 0.00 0.00 0.00 4.04
3234 4023 3.108376 ACCTTGGACCCTCACTTATCTC 58.892 50.000 0.00 0.00 0.00 2.75
3235 4024 3.207044 ACCTTGGACCCTCACTTATCT 57.793 47.619 0.00 0.00 0.00 1.98
3236 4025 4.099727 GTCTACCTTGGACCCTCACTTATC 59.900 50.000 0.00 0.00 0.00 1.75
3237 4026 4.031611 GTCTACCTTGGACCCTCACTTAT 58.968 47.826 0.00 0.00 0.00 1.73
3238 4027 3.181415 TGTCTACCTTGGACCCTCACTTA 60.181 47.826 0.00 0.00 33.22 2.24
3239 4028 2.258109 GTCTACCTTGGACCCTCACTT 58.742 52.381 0.00 0.00 0.00 3.16
3240 4029 1.149288 TGTCTACCTTGGACCCTCACT 59.851 52.381 0.00 0.00 33.22 3.41
3241 4030 1.275573 GTGTCTACCTTGGACCCTCAC 59.724 57.143 0.00 0.00 33.22 3.51
3242 4031 1.132977 TGTGTCTACCTTGGACCCTCA 60.133 52.381 0.00 0.00 33.22 3.86
3243 4032 1.640917 TGTGTCTACCTTGGACCCTC 58.359 55.000 0.00 0.00 33.22 4.30
3244 4033 2.112279 TTGTGTCTACCTTGGACCCT 57.888 50.000 0.00 0.00 33.22 4.34
3245 4034 3.681874 GCTATTGTGTCTACCTTGGACCC 60.682 52.174 0.00 0.00 33.22 4.46
3246 4035 3.532542 GCTATTGTGTCTACCTTGGACC 58.467 50.000 0.00 0.00 33.22 4.46
3247 4036 3.532542 GGCTATTGTGTCTACCTTGGAC 58.467 50.000 0.00 0.00 0.00 4.02
3248 4037 2.504175 GGGCTATTGTGTCTACCTTGGA 59.496 50.000 0.00 0.00 0.00 3.53
3249 4038 2.741878 CGGGCTATTGTGTCTACCTTGG 60.742 54.545 0.00 0.00 0.00 3.61
3250 4039 2.167693 TCGGGCTATTGTGTCTACCTTG 59.832 50.000 0.00 0.00 0.00 3.61
3251 4040 2.463752 TCGGGCTATTGTGTCTACCTT 58.536 47.619 0.00 0.00 0.00 3.50
3252 4041 2.154567 TCGGGCTATTGTGTCTACCT 57.845 50.000 0.00 0.00 0.00 3.08
3253 4042 2.167900 ACTTCGGGCTATTGTGTCTACC 59.832 50.000 0.00 0.00 0.00 3.18
3254 4043 3.187700 CACTTCGGGCTATTGTGTCTAC 58.812 50.000 0.00 0.00 0.00 2.59
3255 4044 2.167693 CCACTTCGGGCTATTGTGTCTA 59.832 50.000 0.00 0.00 0.00 2.59
3256 4045 1.066143 CCACTTCGGGCTATTGTGTCT 60.066 52.381 0.00 0.00 0.00 3.41
3257 4046 1.066430 TCCACTTCGGGCTATTGTGTC 60.066 52.381 0.00 0.00 34.36 3.67
3258 4047 0.981183 TCCACTTCGGGCTATTGTGT 59.019 50.000 0.00 0.00 34.36 3.72
3259 4048 1.066143 ACTCCACTTCGGGCTATTGTG 60.066 52.381 0.00 0.00 34.36 3.33
3260 4049 1.066143 CACTCCACTTCGGGCTATTGT 60.066 52.381 0.00 0.00 34.36 2.71
3261 4050 1.207089 TCACTCCACTTCGGGCTATTG 59.793 52.381 0.00 0.00 34.36 1.90
3262 4051 1.207329 GTCACTCCACTTCGGGCTATT 59.793 52.381 0.00 0.00 34.36 1.73
3263 4052 0.824759 GTCACTCCACTTCGGGCTAT 59.175 55.000 0.00 0.00 34.36 2.97
3264 4053 1.592400 CGTCACTCCACTTCGGGCTA 61.592 60.000 0.00 0.00 34.36 3.93
3265 4054 2.932234 CGTCACTCCACTTCGGGCT 61.932 63.158 0.00 0.00 34.36 5.19
3266 4055 2.432628 CGTCACTCCACTTCGGGC 60.433 66.667 0.00 0.00 34.36 6.13
3267 4056 1.213013 CTCGTCACTCCACTTCGGG 59.787 63.158 0.00 0.00 34.36 5.14
3268 4057 0.387367 CACTCGTCACTCCACTTCGG 60.387 60.000 0.00 0.00 0.00 4.30
3269 4058 0.311165 ACACTCGTCACTCCACTTCG 59.689 55.000 0.00 0.00 0.00 3.79
3270 4059 2.053282 GACACTCGTCACTCCACTTC 57.947 55.000 0.00 0.00 42.13 3.01
3280 4069 2.433318 GCTGCCCTGACACTCGTC 60.433 66.667 0.00 0.00 42.93 4.20
3281 4070 4.008933 GGCTGCCCTGACACTCGT 62.009 66.667 7.66 0.00 0.00 4.18
3282 4071 4.767255 GGGCTGCCCTGACACTCG 62.767 72.222 30.42 0.00 41.34 4.18
3283 4072 4.767255 CGGGCTGCCCTGACACTC 62.767 72.222 33.39 6.69 42.67 3.51
3299 4088 4.147449 TCCGATGCAGACTGGGCG 62.147 66.667 4.26 0.00 0.00 6.13
3300 4089 1.676678 TACTCCGATGCAGACTGGGC 61.677 60.000 4.26 0.00 0.00 5.36
3301 4090 0.387202 CTACTCCGATGCAGACTGGG 59.613 60.000 4.26 0.00 0.00 4.45
3302 4091 3.955291 CTACTCCGATGCAGACTGG 57.045 57.895 4.26 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.