Multiple sequence alignment - TraesCS2D01G066800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G066800 chr2D 100.000 5289 0 0 1 5289 27996480 27991192 0.000000e+00 9768.0
1 TraesCS2D01G066800 chr2D 88.107 3439 364 24 889 4313 27935609 27932202 0.000000e+00 4043.0
2 TraesCS2D01G066800 chr2D 85.276 3654 487 37 908 4539 27982281 27978657 0.000000e+00 3720.0
3 TraesCS2D01G066800 chr2D 93.878 1911 81 24 2698 4591 27965864 27963973 0.000000e+00 2848.0
4 TraesCS2D01G066800 chr2D 85.155 485 48 16 4626 5102 27949668 27949200 4.790000e-130 475.0
5 TraesCS2D01G066800 chr2D 84.514 381 30 10 1 361 27968262 27967891 3.030000e-92 350.0
6 TraesCS2D01G066800 chr2D 86.905 84 11 0 810 893 27953535 27953452 1.570000e-15 95.3
7 TraesCS2D01G066800 chr2D 82.692 104 14 3 794 893 27967656 27967553 7.300000e-14 89.8
8 TraesCS2D01G066800 chr2D 100.000 31 0 0 358 388 27995808 27995778 2.060000e-04 58.4
9 TraesCS2D01G066800 chr2D 100.000 31 0 0 673 703 27996123 27996093 2.060000e-04 58.4
10 TraesCS2D01G066800 chr2B 89.723 4398 371 44 891 5237 45672454 45676821 0.000000e+00 5542.0
11 TraesCS2D01G066800 chr2B 92.448 3893 261 17 889 4755 45549910 45553795 0.000000e+00 5529.0
12 TraesCS2D01G066800 chr2B 88.841 4418 387 50 892 5237 44746035 44741652 0.000000e+00 5330.0
13 TraesCS2D01G066800 chr2B 88.458 2010 221 10 913 2917 44435217 44433214 0.000000e+00 2416.0
14 TraesCS2D01G066800 chr2B 86.563 1987 231 23 2327 4303 45679788 45681748 0.000000e+00 2158.0
15 TraesCS2D01G066800 chr2B 92.029 690 33 4 3 674 45671554 45672239 0.000000e+00 950.0
16 TraesCS2D01G066800 chr2B 89.310 449 20 11 85 528 44746897 44746472 6.030000e-149 538.0
17 TraesCS2D01G066800 chr2B 87.812 320 21 8 3 314 45034011 45033702 5.040000e-95 359.0
18 TraesCS2D01G066800 chr2B 85.593 236 22 1 89 324 45549294 45549517 2.460000e-58 237.0
19 TraesCS2D01G066800 chr2B 90.789 76 7 0 810 885 45549799 45549874 9.370000e-18 102.0
20 TraesCS2D01G066800 chr2B 97.826 46 1 0 1 46 44746953 44746908 4.390000e-11 80.5
21 TraesCS2D01G066800 chr2B 90.741 54 4 1 551 604 44746470 44746418 2.640000e-08 71.3
22 TraesCS2D01G066800 chr2B 97.143 35 1 0 5200 5234 45554673 45554707 5.720000e-05 60.2
23 TraesCS2D01G066800 chr2B 94.737 38 1 1 675 711 44746640 44746603 2.060000e-04 58.4
24 TraesCS2D01G066800 chr2A 87.895 3643 377 31 896 4510 30179173 30175567 0.000000e+00 4226.0
25 TraesCS2D01G066800 chr2A 84.391 3703 531 31 908 4591 30170903 30167229 0.000000e+00 3592.0
26 TraesCS2D01G066800 chr2A 88.078 2206 255 4 1400 3598 30157762 30155558 0.000000e+00 2610.0
27 TraesCS2D01G066800 chr2A 84.361 665 77 8 3649 4313 30155369 30154732 1.250000e-175 627.0
28 TraesCS2D01G066800 chr2A 86.652 457 38 15 4836 5270 30173934 30173479 7.960000e-133 484.0
29 TraesCS2D01G066800 chr2A 84.726 347 40 6 4504 4843 30175249 30174909 8.490000e-88 335.0
30 TraesCS2D01G066800 chr2A 87.059 85 10 1 810 893 30179292 30179208 1.570000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G066800 chr2D 27991192 27996480 5288 True 3294.933333 9768 100.000000 1 5289 3 chr2D.!!$R5 5288
1 TraesCS2D01G066800 chr2D 27932202 27935609 3407 True 4043.000000 4043 88.107000 889 4313 1 chr2D.!!$R1 3424
2 TraesCS2D01G066800 chr2D 27978657 27982281 3624 True 3720.000000 3720 85.276000 908 4539 1 chr2D.!!$R2 3631
3 TraesCS2D01G066800 chr2D 27963973 27968262 4289 True 1095.933333 2848 87.028000 1 4591 3 chr2D.!!$R4 4590
4 TraesCS2D01G066800 chr2D 27949200 27953535 4335 True 285.150000 475 86.030000 810 5102 2 chr2D.!!$R3 4292
5 TraesCS2D01G066800 chr2B 45671554 45681748 10194 False 2883.333333 5542 89.438333 3 5237 3 chr2B.!!$F2 5234
6 TraesCS2D01G066800 chr2B 44433214 44435217 2003 True 2416.000000 2416 88.458000 913 2917 1 chr2B.!!$R1 2004
7 TraesCS2D01G066800 chr2B 45549294 45554707 5413 False 1482.050000 5529 91.493250 89 5234 4 chr2B.!!$F1 5145
8 TraesCS2D01G066800 chr2B 44741652 44746953 5301 True 1215.640000 5330 92.291000 1 5237 5 chr2B.!!$R3 5236
9 TraesCS2D01G066800 chr2A 30167229 30179292 12063 True 1746.460000 4226 86.144600 810 5270 5 chr2A.!!$R2 4460
10 TraesCS2D01G066800 chr2A 30154732 30157762 3030 True 1618.500000 2610 86.219500 1400 4313 2 chr2A.!!$R1 2913

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
706 810 0.034337 GAACCACAGAGCCAACCGTA 59.966 55.0 0.00 0.0 0.00 4.02 F
707 811 0.034896 AACCACAGAGCCAACCGTAG 59.965 55.0 0.00 0.0 0.00 3.51 F
719 823 0.037139 AACCGTAGCAATGTGCCGTA 60.037 50.0 0.00 0.0 46.52 4.02 F
720 824 0.177141 ACCGTAGCAATGTGCCGTAT 59.823 50.0 0.00 0.0 46.52 3.06 F
1947 2456 0.253044 TCTTTCGCCTAGGCAGCAAT 59.747 50.0 32.47 0.0 42.06 3.56 F
2699 3345 0.188342 AACAACCTGACTGGGCCAAT 59.812 50.0 8.04 0.0 41.11 3.16 F
2841 3487 2.214387 GCAACATGCTTAATGGGAGC 57.786 50.0 0.00 0.0 40.96 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2680 3326 0.188342 ATTGGCCCAGTCAGGTTGTT 59.812 50.000 0.00 0.0 34.66 2.83 R
2687 3333 0.258484 CCATGGTATTGGCCCAGTCA 59.742 55.000 2.57 0.0 34.92 3.41 R
2690 3336 0.261402 TTCCCATGGTATTGGCCCAG 59.739 55.000 11.73 0.0 34.92 4.45 R
2692 3338 0.261696 ACTTCCCATGGTATTGGCCC 59.738 55.000 11.73 0.0 35.29 5.80 R
3020 3666 3.244735 TGTGTTGCCTTGCAGGAATACTA 60.245 43.478 0.00 0.0 40.61 1.82 R
4084 4892 2.437085 TAACCTCAGCGATCCTCTCA 57.563 50.000 0.00 0.0 0.00 3.27 R
4724 6006 0.038310 GCTTTGAGCCAGGTTAGGGT 59.962 55.000 0.00 0.0 43.27 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 40 0.719015 AGAAGGGGGAGAGGTGATGA 59.281 55.000 0.00 0.00 0.00 2.92
60 62 1.176527 GCAATGCCTGCCTTCAGTAA 58.823 50.000 0.00 0.00 46.13 2.24
61 63 1.545582 GCAATGCCTGCCTTCAGTAAA 59.454 47.619 0.00 0.00 46.13 2.01
62 64 2.672195 GCAATGCCTGCCTTCAGTAAAC 60.672 50.000 0.00 0.00 46.13 2.01
102 107 8.204836 ACACCTAGTACAATTCAATCAGGTATC 58.795 37.037 0.00 0.00 33.46 2.24
160 167 2.100418 GGCAGCCATCTCTTTTGAATCC 59.900 50.000 6.55 0.00 0.00 3.01
250 274 5.043248 GGACCAATAATTGATTTTCCTGCG 58.957 41.667 0.00 0.00 29.39 5.18
279 303 2.818751 AGATGGACGGAGAAGTCTCT 57.181 50.000 8.19 0.00 42.48 3.10
316 340 6.119240 TCTTCTCCTTGATGACTGAATTGT 57.881 37.500 0.00 0.00 0.00 2.71
328 352 4.639755 TGACTGAATTGTCACTTTGCAGAA 59.360 37.500 0.00 0.00 41.43 3.02
432 505 4.278170 TGTTACTTGATGGTGGCAAAGAAG 59.722 41.667 3.04 0.00 0.00 2.85
476 563 5.986135 CCTTTTCTACTATTCATCCCAGTCG 59.014 44.000 0.00 0.00 0.00 4.18
487 574 5.567037 TCATCCCAGTCGATATTTCCATT 57.433 39.130 0.00 0.00 0.00 3.16
547 651 9.653287 TTGTATATTTCTACTTTGACAGACTGG 57.347 33.333 7.51 0.00 0.00 4.00
548 652 8.812972 TGTATATTTCTACTTTGACAGACTGGT 58.187 33.333 7.51 0.00 0.00 4.00
550 654 8.779354 ATATTTCTACTTTGACAGACTGGTTC 57.221 34.615 7.51 0.00 0.00 3.62
551 655 5.607939 TTCTACTTTGACAGACTGGTTCA 57.392 39.130 7.51 0.00 0.00 3.18
552 656 5.607939 TCTACTTTGACAGACTGGTTCAA 57.392 39.130 7.51 5.94 0.00 2.69
553 657 5.601662 TCTACTTTGACAGACTGGTTCAAG 58.398 41.667 7.51 6.00 0.00 3.02
554 658 2.945668 ACTTTGACAGACTGGTTCAAGC 59.054 45.455 7.51 0.00 0.00 4.01
555 659 2.708216 TTGACAGACTGGTTCAAGCA 57.292 45.000 7.51 0.00 0.00 3.91
556 660 1.953559 TGACAGACTGGTTCAAGCAC 58.046 50.000 7.51 0.00 0.00 4.40
557 661 1.209261 TGACAGACTGGTTCAAGCACA 59.791 47.619 7.51 0.00 0.00 4.57
558 662 1.599542 GACAGACTGGTTCAAGCACAC 59.400 52.381 7.51 0.00 0.00 3.82
559 663 1.065491 ACAGACTGGTTCAAGCACACA 60.065 47.619 7.51 0.00 0.00 3.72
560 664 2.224606 CAGACTGGTTCAAGCACACAT 58.775 47.619 0.00 0.00 0.00 3.21
561 665 2.620115 CAGACTGGTTCAAGCACACATT 59.380 45.455 0.00 0.00 0.00 2.71
562 666 3.067180 CAGACTGGTTCAAGCACACATTT 59.933 43.478 0.00 0.00 0.00 2.32
563 667 3.701040 AGACTGGTTCAAGCACACATTTT 59.299 39.130 0.00 0.00 0.00 1.82
564 668 4.160252 AGACTGGTTCAAGCACACATTTTT 59.840 37.500 0.00 0.00 0.00 1.94
587 691 6.817765 TTTTCATCCACATAAACCTCTCAC 57.182 37.500 0.00 0.00 0.00 3.51
588 692 5.497464 TTCATCCACATAAACCTCTCACA 57.503 39.130 0.00 0.00 0.00 3.58
589 693 5.497464 TCATCCACATAAACCTCTCACAA 57.503 39.130 0.00 0.00 0.00 3.33
590 694 5.491070 TCATCCACATAAACCTCTCACAAG 58.509 41.667 0.00 0.00 0.00 3.16
591 695 4.974645 TCCACATAAACCTCTCACAAGT 57.025 40.909 0.00 0.00 0.00 3.16
592 696 5.304686 TCCACATAAACCTCTCACAAGTT 57.695 39.130 0.00 0.00 0.00 2.66
593 697 5.305585 TCCACATAAACCTCTCACAAGTTC 58.694 41.667 0.00 0.00 0.00 3.01
594 698 4.455877 CCACATAAACCTCTCACAAGTTCC 59.544 45.833 0.00 0.00 0.00 3.62
595 699 5.308825 CACATAAACCTCTCACAAGTTCCT 58.691 41.667 0.00 0.00 0.00 3.36
596 700 5.765182 CACATAAACCTCTCACAAGTTCCTT 59.235 40.000 0.00 0.00 0.00 3.36
597 701 5.998363 ACATAAACCTCTCACAAGTTCCTTC 59.002 40.000 0.00 0.00 0.00 3.46
598 702 4.779993 AAACCTCTCACAAGTTCCTTCT 57.220 40.909 0.00 0.00 0.00 2.85
599 703 3.760580 ACCTCTCACAAGTTCCTTCTG 57.239 47.619 0.00 0.00 0.00 3.02
600 704 3.041946 ACCTCTCACAAGTTCCTTCTGT 58.958 45.455 0.00 0.00 0.00 3.41
601 705 3.181461 ACCTCTCACAAGTTCCTTCTGTG 60.181 47.826 0.00 0.00 0.00 3.66
602 706 2.805099 CTCTCACAAGTTCCTTCTGTGC 59.195 50.000 0.00 0.00 0.00 4.57
603 707 2.435805 TCTCACAAGTTCCTTCTGTGCT 59.564 45.455 0.00 0.00 0.00 4.40
604 708 2.805099 CTCACAAGTTCCTTCTGTGCTC 59.195 50.000 0.00 0.00 0.00 4.26
605 709 2.170397 TCACAAGTTCCTTCTGTGCTCA 59.830 45.455 0.00 0.00 0.00 4.26
606 710 2.547211 CACAAGTTCCTTCTGTGCTCAG 59.453 50.000 9.54 9.54 42.54 3.35
607 711 2.149578 CAAGTTCCTTCTGTGCTCAGG 58.850 52.381 15.39 1.22 41.59 3.86
608 712 0.036022 AGTTCCTTCTGTGCTCAGGC 59.964 55.000 15.39 0.93 41.59 4.85
609 713 0.957888 GTTCCTTCTGTGCTCAGGCC 60.958 60.000 15.39 0.00 41.59 5.19
610 714 1.130054 TTCCTTCTGTGCTCAGGCCT 61.130 55.000 15.39 0.00 41.59 5.19
611 715 1.130054 TCCTTCTGTGCTCAGGCCTT 61.130 55.000 15.39 0.00 41.59 4.35
612 716 0.251077 CCTTCTGTGCTCAGGCCTTT 60.251 55.000 15.39 0.00 41.59 3.11
613 717 1.613836 CTTCTGTGCTCAGGCCTTTT 58.386 50.000 15.39 0.00 41.59 2.27
614 718 1.959282 CTTCTGTGCTCAGGCCTTTTT 59.041 47.619 15.39 0.00 41.59 1.94
615 719 1.609208 TCTGTGCTCAGGCCTTTTTC 58.391 50.000 15.39 0.00 41.59 2.29
616 720 1.133823 TCTGTGCTCAGGCCTTTTTCA 60.134 47.619 15.39 0.00 41.59 2.69
617 721 1.268899 CTGTGCTCAGGCCTTTTTCAG 59.731 52.381 0.00 4.89 37.97 3.02
618 722 1.322442 GTGCTCAGGCCTTTTTCAGT 58.678 50.000 0.00 0.00 37.74 3.41
619 723 1.268079 GTGCTCAGGCCTTTTTCAGTC 59.732 52.381 0.00 0.00 37.74 3.51
620 724 1.133823 TGCTCAGGCCTTTTTCAGTCA 60.134 47.619 0.00 0.00 37.74 3.41
621 725 2.165998 GCTCAGGCCTTTTTCAGTCAT 58.834 47.619 0.00 0.00 0.00 3.06
622 726 3.244875 TGCTCAGGCCTTTTTCAGTCATA 60.245 43.478 0.00 0.00 37.74 2.15
623 727 3.758554 GCTCAGGCCTTTTTCAGTCATAA 59.241 43.478 0.00 0.00 0.00 1.90
624 728 4.218417 GCTCAGGCCTTTTTCAGTCATAAA 59.782 41.667 0.00 0.00 0.00 1.40
625 729 5.105595 GCTCAGGCCTTTTTCAGTCATAAAT 60.106 40.000 0.00 0.00 0.00 1.40
626 730 6.095440 GCTCAGGCCTTTTTCAGTCATAAATA 59.905 38.462 0.00 0.00 0.00 1.40
627 731 7.362920 GCTCAGGCCTTTTTCAGTCATAAATAA 60.363 37.037 0.00 0.00 0.00 1.40
628 732 8.055279 TCAGGCCTTTTTCAGTCATAAATAAG 57.945 34.615 0.00 0.00 0.00 1.73
629 733 7.669722 TCAGGCCTTTTTCAGTCATAAATAAGT 59.330 33.333 0.00 0.00 0.00 2.24
630 734 7.756722 CAGGCCTTTTTCAGTCATAAATAAGTG 59.243 37.037 0.00 0.00 0.00 3.16
631 735 7.035612 GGCCTTTTTCAGTCATAAATAAGTGG 58.964 38.462 0.00 0.00 0.00 4.00
632 736 6.531594 GCCTTTTTCAGTCATAAATAAGTGGC 59.468 38.462 0.00 0.00 0.00 5.01
633 737 7.601856 CCTTTTTCAGTCATAAATAAGTGGCA 58.398 34.615 0.00 0.00 0.00 4.92
634 738 7.542130 CCTTTTTCAGTCATAAATAAGTGGCAC 59.458 37.037 10.29 10.29 0.00 5.01
635 739 7.759489 TTTTCAGTCATAAATAAGTGGCACT 57.241 32.000 15.88 15.88 0.00 4.40
636 740 6.741992 TTCAGTCATAAATAAGTGGCACTG 57.258 37.500 22.83 7.72 32.87 3.66
637 741 6.048732 TCAGTCATAAATAAGTGGCACTGA 57.951 37.500 22.83 15.26 37.32 3.41
638 742 6.472016 TCAGTCATAAATAAGTGGCACTGAA 58.528 36.000 22.83 13.22 36.85 3.02
639 743 6.595326 TCAGTCATAAATAAGTGGCACTGAAG 59.405 38.462 22.83 9.10 36.85 3.02
640 744 6.372659 CAGTCATAAATAAGTGGCACTGAAGT 59.627 38.462 22.83 9.20 33.30 3.01
641 745 6.595716 AGTCATAAATAAGTGGCACTGAAGTC 59.404 38.462 22.83 6.15 0.00 3.01
642 746 6.371548 GTCATAAATAAGTGGCACTGAAGTCA 59.628 38.462 22.83 5.75 0.00 3.41
643 747 6.939730 TCATAAATAAGTGGCACTGAAGTCAA 59.060 34.615 22.83 4.42 0.00 3.18
644 748 5.695851 AAATAAGTGGCACTGAAGTCAAG 57.304 39.130 22.83 0.00 0.00 3.02
645 749 4.623932 ATAAGTGGCACTGAAGTCAAGA 57.376 40.909 22.83 0.00 0.00 3.02
646 750 3.281727 AAGTGGCACTGAAGTCAAGAA 57.718 42.857 22.83 0.00 0.00 2.52
647 751 2.843701 AGTGGCACTGAAGTCAAGAAG 58.156 47.619 21.37 0.00 0.00 2.85
648 752 2.435805 AGTGGCACTGAAGTCAAGAAGA 59.564 45.455 21.37 0.00 0.00 2.87
649 753 3.118261 AGTGGCACTGAAGTCAAGAAGAA 60.118 43.478 21.37 0.00 0.00 2.52
650 754 3.249559 GTGGCACTGAAGTCAAGAAGAAG 59.750 47.826 11.13 0.00 0.00 2.85
651 755 3.118261 TGGCACTGAAGTCAAGAAGAAGT 60.118 43.478 0.00 0.00 0.00 3.01
652 756 3.879892 GGCACTGAAGTCAAGAAGAAGTT 59.120 43.478 0.00 0.00 0.00 2.66
653 757 4.336713 GGCACTGAAGTCAAGAAGAAGTTT 59.663 41.667 0.00 0.00 0.00 2.66
654 758 5.504830 GGCACTGAAGTCAAGAAGAAGTTTC 60.505 44.000 0.00 0.00 0.00 2.78
655 759 5.065218 GCACTGAAGTCAAGAAGAAGTTTCA 59.935 40.000 0.00 0.00 0.00 2.69
656 760 6.403636 GCACTGAAGTCAAGAAGAAGTTTCAA 60.404 38.462 0.00 0.00 0.00 2.69
657 761 6.963805 CACTGAAGTCAAGAAGAAGTTTCAAC 59.036 38.462 0.00 0.00 0.00 3.18
658 762 6.881602 ACTGAAGTCAAGAAGAAGTTTCAACT 59.118 34.615 0.00 0.00 42.04 3.16
659 763 7.065204 ACTGAAGTCAAGAAGAAGTTTCAACTC 59.935 37.037 0.00 0.00 38.57 3.01
660 764 6.316390 TGAAGTCAAGAAGAAGTTTCAACTCC 59.684 38.462 0.00 0.00 38.57 3.85
661 765 5.126779 AGTCAAGAAGAAGTTTCAACTCCC 58.873 41.667 0.00 0.00 38.57 4.30
662 766 4.276183 GTCAAGAAGAAGTTTCAACTCCCC 59.724 45.833 0.00 0.00 38.57 4.81
663 767 4.166144 TCAAGAAGAAGTTTCAACTCCCCT 59.834 41.667 0.00 0.00 38.57 4.79
664 768 5.368523 TCAAGAAGAAGTTTCAACTCCCCTA 59.631 40.000 0.00 0.00 38.57 3.53
665 769 6.044404 TCAAGAAGAAGTTTCAACTCCCCTAT 59.956 38.462 0.00 0.00 38.57 2.57
666 770 6.455690 AGAAGAAGTTTCAACTCCCCTATT 57.544 37.500 0.00 0.00 38.57 1.73
667 771 6.477253 AGAAGAAGTTTCAACTCCCCTATTC 58.523 40.000 0.00 0.00 38.57 1.75
668 772 5.180810 AGAAGTTTCAACTCCCCTATTCC 57.819 43.478 0.00 0.00 38.57 3.01
669 773 4.852697 AGAAGTTTCAACTCCCCTATTCCT 59.147 41.667 0.00 0.00 38.57 3.36
670 774 4.846168 AGTTTCAACTCCCCTATTCCTC 57.154 45.455 0.00 0.00 32.86 3.71
671 775 4.439860 AGTTTCAACTCCCCTATTCCTCT 58.560 43.478 0.00 0.00 32.86 3.69
672 776 5.600749 AGTTTCAACTCCCCTATTCCTCTA 58.399 41.667 0.00 0.00 32.86 2.43
673 777 6.030082 AGTTTCAACTCCCCTATTCCTCTAA 58.970 40.000 0.00 0.00 32.86 2.10
674 778 6.678857 AGTTTCAACTCCCCTATTCCTCTAAT 59.321 38.462 0.00 0.00 32.86 1.73
675 779 7.849904 AGTTTCAACTCCCCTATTCCTCTAATA 59.150 37.037 0.00 0.00 32.86 0.98
676 780 7.857404 TTCAACTCCCCTATTCCTCTAATAG 57.143 40.000 0.00 0.00 44.62 1.73
703 807 4.898607 TGAACCACAGAGCCAACC 57.101 55.556 0.00 0.00 0.00 3.77
704 808 1.227823 TGAACCACAGAGCCAACCG 60.228 57.895 0.00 0.00 0.00 4.44
705 809 1.227853 GAACCACAGAGCCAACCGT 60.228 57.895 0.00 0.00 0.00 4.83
706 810 0.034337 GAACCACAGAGCCAACCGTA 59.966 55.000 0.00 0.00 0.00 4.02
707 811 0.034896 AACCACAGAGCCAACCGTAG 59.965 55.000 0.00 0.00 0.00 3.51
708 812 1.741770 CCACAGAGCCAACCGTAGC 60.742 63.158 0.00 0.00 0.00 3.58
709 813 1.005037 CACAGAGCCAACCGTAGCA 60.005 57.895 0.00 0.00 0.00 3.49
710 814 0.602638 CACAGAGCCAACCGTAGCAA 60.603 55.000 0.00 0.00 0.00 3.91
711 815 0.324943 ACAGAGCCAACCGTAGCAAT 59.675 50.000 0.00 0.00 0.00 3.56
712 816 0.729116 CAGAGCCAACCGTAGCAATG 59.271 55.000 0.00 0.00 0.00 2.82
713 817 0.324943 AGAGCCAACCGTAGCAATGT 59.675 50.000 0.00 0.00 0.00 2.71
714 818 0.447801 GAGCCAACCGTAGCAATGTG 59.552 55.000 0.00 0.00 0.00 3.21
715 819 1.154035 GCCAACCGTAGCAATGTGC 60.154 57.895 0.00 0.00 45.46 4.57
716 820 1.506262 CCAACCGTAGCAATGTGCC 59.494 57.895 0.00 0.00 46.52 5.01
717 821 1.134487 CAACCGTAGCAATGTGCCG 59.866 57.895 0.00 0.00 46.52 5.69
718 822 1.302192 AACCGTAGCAATGTGCCGT 60.302 52.632 0.00 0.00 46.52 5.68
719 823 0.037139 AACCGTAGCAATGTGCCGTA 60.037 50.000 0.00 0.00 46.52 4.02
720 824 0.177141 ACCGTAGCAATGTGCCGTAT 59.823 50.000 0.00 0.00 46.52 3.06
721 825 1.409790 ACCGTAGCAATGTGCCGTATA 59.590 47.619 0.00 0.00 46.52 1.47
722 826 1.790623 CCGTAGCAATGTGCCGTATAC 59.209 52.381 0.00 0.00 46.52 1.47
723 827 2.465855 CGTAGCAATGTGCCGTATACA 58.534 47.619 3.32 0.00 46.52 2.29
724 828 2.861335 CGTAGCAATGTGCCGTATACAA 59.139 45.455 3.32 0.00 46.52 2.41
725 829 3.307512 CGTAGCAATGTGCCGTATACAAA 59.692 43.478 3.32 0.00 46.52 2.83
726 830 4.025229 CGTAGCAATGTGCCGTATACAAAT 60.025 41.667 3.32 0.00 46.52 2.32
727 831 4.981806 AGCAATGTGCCGTATACAAATT 57.018 36.364 3.32 0.00 46.52 1.82
728 832 5.323371 AGCAATGTGCCGTATACAAATTT 57.677 34.783 3.32 0.00 46.52 1.82
729 833 5.719173 AGCAATGTGCCGTATACAAATTTT 58.281 33.333 3.32 0.00 46.52 1.82
730 834 5.576384 AGCAATGTGCCGTATACAAATTTTG 59.424 36.000 7.59 7.59 46.52 2.44
731 835 5.220378 GCAATGTGCCGTATACAAATTTTGG 60.220 40.000 13.42 0.00 37.42 3.28
732 836 5.652994 ATGTGCCGTATACAAATTTTGGT 57.347 34.783 13.42 4.64 34.12 3.67
733 837 5.455056 TGTGCCGTATACAAATTTTGGTT 57.545 34.783 13.42 3.24 34.12 3.67
734 838 6.570672 TGTGCCGTATACAAATTTTGGTTA 57.429 33.333 13.42 2.36 34.12 2.85
735 839 6.380190 TGTGCCGTATACAAATTTTGGTTAC 58.620 36.000 13.42 12.01 34.12 2.50
736 840 6.207025 TGTGCCGTATACAAATTTTGGTTACT 59.793 34.615 13.42 0.00 34.12 2.24
737 841 7.085746 GTGCCGTATACAAATTTTGGTTACTT 58.914 34.615 13.42 0.00 34.12 2.24
738 842 7.595875 GTGCCGTATACAAATTTTGGTTACTTT 59.404 33.333 13.42 0.00 34.12 2.66
739 843 8.142551 TGCCGTATACAAATTTTGGTTACTTTT 58.857 29.630 13.42 0.00 34.12 2.27
740 844 8.641155 GCCGTATACAAATTTTGGTTACTTTTC 58.359 33.333 13.42 2.02 34.12 2.29
741 845 9.902196 CCGTATACAAATTTTGGTTACTTTTCT 57.098 29.630 13.42 0.00 34.12 2.52
752 856 9.569122 TTTTGGTTACTTTTCTACTATTCAGCT 57.431 29.630 0.00 0.00 0.00 4.24
753 857 8.773404 TTGGTTACTTTTCTACTATTCAGCTC 57.227 34.615 0.00 0.00 0.00 4.09
754 858 7.903145 TGGTTACTTTTCTACTATTCAGCTCA 58.097 34.615 0.00 0.00 0.00 4.26
755 859 7.817962 TGGTTACTTTTCTACTATTCAGCTCAC 59.182 37.037 0.00 0.00 0.00 3.51
756 860 7.278203 GGTTACTTTTCTACTATTCAGCTCACC 59.722 40.741 0.00 0.00 0.00 4.02
757 861 6.360370 ACTTTTCTACTATTCAGCTCACCA 57.640 37.500 0.00 0.00 0.00 4.17
758 862 6.769512 ACTTTTCTACTATTCAGCTCACCAA 58.230 36.000 0.00 0.00 0.00 3.67
759 863 7.224297 ACTTTTCTACTATTCAGCTCACCAAA 58.776 34.615 0.00 0.00 0.00 3.28
760 864 7.885399 ACTTTTCTACTATTCAGCTCACCAAAT 59.115 33.333 0.00 0.00 0.00 2.32
761 865 9.383519 CTTTTCTACTATTCAGCTCACCAAATA 57.616 33.333 0.00 0.00 0.00 1.40
762 866 9.905713 TTTTCTACTATTCAGCTCACCAAATAT 57.094 29.630 0.00 0.00 0.00 1.28
763 867 9.905713 TTTCTACTATTCAGCTCACCAAATATT 57.094 29.630 0.00 0.00 0.00 1.28
764 868 9.905713 TTCTACTATTCAGCTCACCAAATATTT 57.094 29.630 0.00 0.00 0.00 1.40
765 869 9.547753 TCTACTATTCAGCTCACCAAATATTTC 57.452 33.333 0.00 0.00 0.00 2.17
766 870 7.573968 ACTATTCAGCTCACCAAATATTTCC 57.426 36.000 0.00 0.00 0.00 3.13
767 871 7.118723 ACTATTCAGCTCACCAAATATTTCCA 58.881 34.615 0.00 0.00 0.00 3.53
768 872 7.781693 ACTATTCAGCTCACCAAATATTTCCAT 59.218 33.333 0.00 0.00 0.00 3.41
769 873 5.840243 TCAGCTCACCAAATATTTCCATG 57.160 39.130 0.00 0.00 0.00 3.66
770 874 4.646040 TCAGCTCACCAAATATTTCCATGG 59.354 41.667 4.97 4.97 38.91 3.66
771 875 4.646040 CAGCTCACCAAATATTTCCATGGA 59.354 41.667 11.44 11.44 36.75 3.41
772 876 5.303589 CAGCTCACCAAATATTTCCATGGAT 59.696 40.000 17.06 3.82 36.75 3.41
773 877 5.303589 AGCTCACCAAATATTTCCATGGATG 59.696 40.000 17.06 9.61 36.75 3.51
784 888 1.416243 CCATGGATGGGTGGATTTGG 58.584 55.000 5.56 0.00 44.31 3.28
785 889 1.416243 CATGGATGGGTGGATTTGGG 58.584 55.000 0.00 0.00 0.00 4.12
786 890 1.063038 CATGGATGGGTGGATTTGGGA 60.063 52.381 0.00 0.00 0.00 4.37
787 891 0.630673 TGGATGGGTGGATTTGGGAG 59.369 55.000 0.00 0.00 0.00 4.30
788 892 0.926293 GGATGGGTGGATTTGGGAGA 59.074 55.000 0.00 0.00 0.00 3.71
789 893 1.287739 GGATGGGTGGATTTGGGAGAA 59.712 52.381 0.00 0.00 0.00 2.87
790 894 2.091111 GGATGGGTGGATTTGGGAGAAT 60.091 50.000 0.00 0.00 0.00 2.40
791 895 3.140144 GGATGGGTGGATTTGGGAGAATA 59.860 47.826 0.00 0.00 0.00 1.75
792 896 4.387437 GGATGGGTGGATTTGGGAGAATAA 60.387 45.833 0.00 0.00 0.00 1.40
793 897 4.898014 TGGGTGGATTTGGGAGAATAAT 57.102 40.909 0.00 0.00 0.00 1.28
794 898 6.468651 GGATGGGTGGATTTGGGAGAATAATA 60.469 42.308 0.00 0.00 0.00 0.98
795 899 6.544327 TGGGTGGATTTGGGAGAATAATAT 57.456 37.500 0.00 0.00 0.00 1.28
796 900 6.932753 TGGGTGGATTTGGGAGAATAATATT 58.067 36.000 0.00 0.00 0.00 1.28
797 901 7.369434 TGGGTGGATTTGGGAGAATAATATTT 58.631 34.615 0.00 0.00 0.00 1.40
798 902 7.289782 TGGGTGGATTTGGGAGAATAATATTTG 59.710 37.037 0.00 0.00 0.00 2.32
799 903 7.290014 GGGTGGATTTGGGAGAATAATATTTGT 59.710 37.037 0.00 0.00 0.00 2.83
800 904 8.704668 GGTGGATTTGGGAGAATAATATTTGTT 58.295 33.333 0.00 0.00 0.00 2.83
801 905 9.750125 GTGGATTTGGGAGAATAATATTTGTTC 57.250 33.333 0.00 0.00 0.00 3.18
802 906 8.923270 TGGATTTGGGAGAATAATATTTGTTCC 58.077 33.333 0.00 0.00 31.92 3.62
803 907 9.147732 GGATTTGGGAGAATAATATTTGTTCCT 57.852 33.333 0.00 0.00 31.92 3.36
806 910 9.540538 TTTGGGAGAATAATATTTGTTCCTTGA 57.459 29.630 0.00 0.00 31.92 3.02
807 911 9.713684 TTGGGAGAATAATATTTGTTCCTTGAT 57.286 29.630 0.00 0.00 31.92 2.57
841 946 5.910723 CACACGTTTTCTTTACCCACATAAC 59.089 40.000 0.00 0.00 0.00 1.89
847 952 5.853572 TTCTTTACCCACATAACCCTCTT 57.146 39.130 0.00 0.00 0.00 2.85
848 953 5.174037 TCTTTACCCACATAACCCTCTTG 57.826 43.478 0.00 0.00 0.00 3.02
856 961 4.463891 CCACATAACCCTCTTGCAAATTCT 59.536 41.667 0.00 0.00 0.00 2.40
861 966 7.657354 ACATAACCCTCTTGCAAATTCTTTTTC 59.343 33.333 0.00 0.00 0.00 2.29
911 1376 4.630069 GGCGCTCAAGTCAAAGTATAGAAA 59.370 41.667 7.64 0.00 0.00 2.52
945 1451 6.384305 CCCCTACCCTTCCACATATATCTAAG 59.616 46.154 0.00 0.00 0.00 2.18
946 1452 6.127026 CCCTACCCTTCCACATATATCTAAGC 60.127 46.154 0.00 0.00 0.00 3.09
947 1453 6.440647 CCTACCCTTCCACATATATCTAAGCA 59.559 42.308 0.00 0.00 0.00 3.91
948 1454 6.115448 ACCCTTCCACATATATCTAAGCAC 57.885 41.667 0.00 0.00 0.00 4.40
949 1455 5.606749 ACCCTTCCACATATATCTAAGCACA 59.393 40.000 0.00 0.00 0.00 4.57
950 1456 5.934625 CCCTTCCACATATATCTAAGCACAC 59.065 44.000 0.00 0.00 0.00 3.82
951 1457 6.464322 CCCTTCCACATATATCTAAGCACACA 60.464 42.308 0.00 0.00 0.00 3.72
952 1458 6.425114 CCTTCCACATATATCTAAGCACACAC 59.575 42.308 0.00 0.00 0.00 3.82
953 1459 6.478512 TCCACATATATCTAAGCACACACA 57.521 37.500 0.00 0.00 0.00 3.72
954 1460 6.280643 TCCACATATATCTAAGCACACACAC 58.719 40.000 0.00 0.00 0.00 3.82
955 1461 6.048509 CCACATATATCTAAGCACACACACA 58.951 40.000 0.00 0.00 0.00 3.72
956 1462 6.538381 CCACATATATCTAAGCACACACACAA 59.462 38.462 0.00 0.00 0.00 3.33
957 1463 7.065683 CCACATATATCTAAGCACACACACAAA 59.934 37.037 0.00 0.00 0.00 2.83
958 1464 7.904977 CACATATATCTAAGCACACACACAAAC 59.095 37.037 0.00 0.00 0.00 2.93
1027 1536 2.459934 CTCAAGTTTTTCGCACCCAAC 58.540 47.619 0.00 0.00 0.00 3.77
1045 1554 0.336737 ACCTCTGATTCCTCCGTCCT 59.663 55.000 0.00 0.00 0.00 3.85
1050 1559 2.108168 CTGATTCCTCCGTCCTACCAA 58.892 52.381 0.00 0.00 0.00 3.67
1051 1560 2.700897 CTGATTCCTCCGTCCTACCAAT 59.299 50.000 0.00 0.00 0.00 3.16
1116 1625 7.041848 TCCAACACAATAATATTCTCATCAGCG 60.042 37.037 0.00 0.00 0.00 5.18
1134 1643 0.665835 CGCAGGCTACCAACAAAACA 59.334 50.000 0.00 0.00 0.00 2.83
1143 1652 5.183904 GGCTACCAACAAAACAGAAGATGAT 59.816 40.000 0.00 0.00 0.00 2.45
1210 1719 1.065491 CCGGTGTTCTTGGATCATGGA 60.065 52.381 0.00 0.00 0.00 3.41
1442 1951 0.389426 CAAACCCTGATGCTTGCTGC 60.389 55.000 0.00 0.00 43.25 5.25
1933 2442 3.433274 TGCGTCATCACTCACATTCTTTC 59.567 43.478 0.00 0.00 0.00 2.62
1947 2456 0.253044 TCTTTCGCCTAGGCAGCAAT 59.747 50.000 32.47 0.00 42.06 3.56
2190 2699 0.407139 AAGCTGATGACTGGGCCTTT 59.593 50.000 4.53 0.00 0.00 3.11
2214 2723 1.271597 ACCTCTCTGACCAATTGCACC 60.272 52.381 0.00 0.00 0.00 5.01
2234 2743 6.039270 TGCACCCAGTTGTTAATATTATCAGC 59.961 38.462 10.71 10.71 0.00 4.26
2348 2857 2.100584 CTGGAGACATACCAGCTGAGAC 59.899 54.545 17.39 2.68 46.30 3.36
2567 3213 7.206981 CTGGAAACATACCAGCAAATATAGG 57.793 40.000 0.00 0.00 46.30 2.57
2568 3214 6.905736 TGGAAACATACCAGCAAATATAGGA 58.094 36.000 0.00 0.00 33.40 2.94
2569 3215 6.770785 TGGAAACATACCAGCAAATATAGGAC 59.229 38.462 0.00 0.00 33.40 3.85
2570 3216 6.770785 GGAAACATACCAGCAAATATAGGACA 59.229 38.462 0.00 0.00 0.00 4.02
2571 3217 7.284489 GGAAACATACCAGCAAATATAGGACAA 59.716 37.037 0.00 0.00 0.00 3.18
2572 3218 8.766994 AAACATACCAGCAAATATAGGACAAT 57.233 30.769 0.00 0.00 0.00 2.71
2573 3219 7.750229 ACATACCAGCAAATATAGGACAATG 57.250 36.000 0.00 0.00 0.00 2.82
2574 3220 6.207417 ACATACCAGCAAATATAGGACAATGC 59.793 38.462 0.00 0.00 0.00 3.56
2575 3221 4.535781 ACCAGCAAATATAGGACAATGCA 58.464 39.130 0.00 0.00 36.30 3.96
2576 3222 4.955450 ACCAGCAAATATAGGACAATGCAA 59.045 37.500 0.00 0.00 36.30 4.08
2577 3223 5.163519 ACCAGCAAATATAGGACAATGCAAC 60.164 40.000 0.00 0.00 36.30 4.17
2578 3224 5.163530 CCAGCAAATATAGGACAATGCAACA 60.164 40.000 0.00 0.00 36.30 3.33
2579 3225 5.975344 CAGCAAATATAGGACAATGCAACAG 59.025 40.000 0.00 0.00 36.30 3.16
2580 3226 5.068198 AGCAAATATAGGACAATGCAACAGG 59.932 40.000 0.00 0.00 36.30 4.00
2581 3227 5.284079 CAAATATAGGACAATGCAACAGGC 58.716 41.667 0.00 0.00 45.13 4.85
2582 3228 2.814805 ATAGGACAATGCAACAGGCT 57.185 45.000 0.00 0.00 45.15 4.58
2583 3229 1.825090 TAGGACAATGCAACAGGCTG 58.175 50.000 14.16 14.16 45.15 4.85
2584 3230 1.080298 GGACAATGCAACAGGCTGC 60.080 57.895 15.89 1.63 45.15 5.25
2585 3231 1.530013 GGACAATGCAACAGGCTGCT 61.530 55.000 15.89 0.00 45.15 4.24
2586 3232 0.316204 GACAATGCAACAGGCTGCTT 59.684 50.000 15.89 5.45 45.15 3.91
2587 3233 1.541147 GACAATGCAACAGGCTGCTTA 59.459 47.619 15.89 0.00 45.15 3.09
2588 3234 2.165030 GACAATGCAACAGGCTGCTTAT 59.835 45.455 15.89 1.22 45.15 1.73
2589 3235 2.094390 ACAATGCAACAGGCTGCTTATG 60.094 45.455 15.89 9.92 45.15 1.90
2590 3236 0.458669 ATGCAACAGGCTGCTTATGC 59.541 50.000 15.89 19.24 45.15 3.14
2591 3237 0.609957 TGCAACAGGCTGCTTATGCT 60.610 50.000 25.25 1.92 45.15 3.79
2592 3238 1.339920 TGCAACAGGCTGCTTATGCTA 60.340 47.619 25.25 14.87 45.15 3.49
2593 3239 1.745087 GCAACAGGCTGCTTATGCTAA 59.255 47.619 15.89 0.00 39.34 3.09
2594 3240 2.164219 GCAACAGGCTGCTTATGCTAAA 59.836 45.455 15.89 0.00 39.34 1.85
2595 3241 3.762779 CAACAGGCTGCTTATGCTAAAC 58.237 45.455 15.89 0.00 40.48 2.01
2596 3242 3.071874 ACAGGCTGCTTATGCTAAACA 57.928 42.857 15.89 0.00 40.48 2.83
2597 3243 3.624777 ACAGGCTGCTTATGCTAAACAT 58.375 40.909 15.89 0.00 43.18 2.71
2598 3244 3.379372 ACAGGCTGCTTATGCTAAACATG 59.621 43.478 15.89 0.00 40.06 3.21
2599 3245 3.379372 CAGGCTGCTTATGCTAAACATGT 59.621 43.478 0.00 0.00 40.06 3.21
2600 3246 3.629398 AGGCTGCTTATGCTAAACATGTC 59.371 43.478 0.00 0.00 40.06 3.06
2601 3247 3.378112 GGCTGCTTATGCTAAACATGTCA 59.622 43.478 0.00 0.00 40.06 3.58
2602 3248 4.497006 GGCTGCTTATGCTAAACATGTCAG 60.497 45.833 0.00 0.42 40.06 3.51
2603 3249 4.095483 GCTGCTTATGCTAAACATGTCAGT 59.905 41.667 0.00 0.00 40.06 3.41
2604 3250 5.392380 GCTGCTTATGCTAAACATGTCAGTT 60.392 40.000 0.00 0.00 40.06 3.16
2605 3251 6.183360 GCTGCTTATGCTAAACATGTCAGTTA 60.183 38.462 0.00 0.00 40.06 2.24
2606 3252 7.626240 GCTGCTTATGCTAAACATGTCAGTTAA 60.626 37.037 0.00 2.67 40.06 2.01
2607 3253 7.526608 TGCTTATGCTAAACATGTCAGTTAAC 58.473 34.615 0.00 0.00 40.06 2.01
2608 3254 6.967199 GCTTATGCTAAACATGTCAGTTAACC 59.033 38.462 0.00 0.00 40.06 2.85
2609 3255 7.361713 GCTTATGCTAAACATGTCAGTTAACCA 60.362 37.037 0.00 0.00 40.06 3.67
2610 3256 5.682943 TGCTAAACATGTCAGTTAACCAC 57.317 39.130 0.00 0.00 0.00 4.16
2611 3257 4.517453 TGCTAAACATGTCAGTTAACCACC 59.483 41.667 0.00 0.00 0.00 4.61
2612 3258 4.760204 GCTAAACATGTCAGTTAACCACCT 59.240 41.667 0.00 0.00 0.00 4.00
2613 3259 5.240844 GCTAAACATGTCAGTTAACCACCTT 59.759 40.000 0.00 0.00 0.00 3.50
2614 3260 5.514274 AAACATGTCAGTTAACCACCTTG 57.486 39.130 0.00 3.50 0.00 3.61
2615 3261 4.431416 ACATGTCAGTTAACCACCTTGA 57.569 40.909 0.88 0.00 0.00 3.02
2616 3262 4.985538 ACATGTCAGTTAACCACCTTGAT 58.014 39.130 0.88 0.00 0.00 2.57
2617 3263 4.761739 ACATGTCAGTTAACCACCTTGATG 59.238 41.667 0.88 2.64 0.00 3.07
2618 3264 3.750371 TGTCAGTTAACCACCTTGATGG 58.250 45.455 0.88 0.00 46.10 3.51
2619 3265 3.392947 TGTCAGTTAACCACCTTGATGGA 59.607 43.478 0.88 0.00 43.02 3.41
2620 3266 4.042809 TGTCAGTTAACCACCTTGATGGAT 59.957 41.667 0.88 0.00 43.02 3.41
2621 3267 4.636206 GTCAGTTAACCACCTTGATGGATC 59.364 45.833 0.88 0.00 43.02 3.36
2622 3268 3.947834 CAGTTAACCACCTTGATGGATCC 59.052 47.826 4.20 4.20 43.02 3.36
2623 3269 3.591527 AGTTAACCACCTTGATGGATCCA 59.408 43.478 18.88 18.88 43.02 3.41
2624 3270 4.230502 AGTTAACCACCTTGATGGATCCAT 59.769 41.667 27.66 27.66 43.02 3.41
2625 3271 5.431731 AGTTAACCACCTTGATGGATCCATA 59.568 40.000 27.38 12.06 43.02 2.74
2626 3272 3.864789 ACCACCTTGATGGATCCATAC 57.135 47.619 27.38 19.50 43.02 2.39
2627 3273 2.443255 ACCACCTTGATGGATCCATACC 59.557 50.000 27.38 16.15 43.02 2.73
2628 3274 2.442878 CCACCTTGATGGATCCATACCA 59.557 50.000 27.38 18.61 43.02 3.25
2629 3275 3.117550 CCACCTTGATGGATCCATACCAA 60.118 47.826 27.38 23.87 43.02 3.67
2630 3276 4.139786 CACCTTGATGGATCCATACCAAG 58.860 47.826 31.37 31.37 40.93 3.61
2631 3277 4.047166 ACCTTGATGGATCCATACCAAGA 58.953 43.478 35.79 17.30 40.93 3.02
2632 3278 4.103785 ACCTTGATGGATCCATACCAAGAG 59.896 45.833 35.79 29.71 40.93 2.85
2633 3279 4.349048 CCTTGATGGATCCATACCAAGAGA 59.651 45.833 35.79 16.52 40.93 3.10
2634 3280 5.163163 CCTTGATGGATCCATACCAAGAGAA 60.163 44.000 35.79 16.25 40.93 2.87
2635 3281 5.296151 TGATGGATCCATACCAAGAGAAC 57.704 43.478 27.38 11.09 40.93 3.01
2636 3282 4.971282 TGATGGATCCATACCAAGAGAACT 59.029 41.667 27.38 0.67 40.93 3.01
2637 3283 5.070981 TGATGGATCCATACCAAGAGAACTC 59.929 44.000 27.38 11.36 40.93 3.01
2638 3284 4.624913 TGGATCCATACCAAGAGAACTCT 58.375 43.478 11.44 0.00 42.75 3.24
2639 3285 5.669447 ATGGATCCATACCAAGAGAACTCTT 59.331 40.000 26.25 10.77 41.53 2.85
2640 3286 5.129485 TGGATCCATACCAAGAGAACTCTTC 59.871 44.000 11.44 1.06 46.13 2.87
2641 3287 5.129485 GGATCCATACCAAGAGAACTCTTCA 59.871 44.000 13.26 3.95 46.13 3.02
2642 3288 5.667539 TCCATACCAAGAGAACTCTTCAG 57.332 43.478 13.26 10.62 46.13 3.02
2643 3289 5.087323 TCCATACCAAGAGAACTCTTCAGT 58.913 41.667 13.26 14.87 46.13 3.41
2644 3290 6.253758 TCCATACCAAGAGAACTCTTCAGTA 58.746 40.000 13.26 16.19 46.13 2.74
2645 3291 6.897966 TCCATACCAAGAGAACTCTTCAGTAT 59.102 38.462 19.85 19.85 46.13 2.12
2646 3292 7.400339 TCCATACCAAGAGAACTCTTCAGTATT 59.600 37.037 21.44 12.20 46.13 1.89
2647 3293 8.043710 CCATACCAAGAGAACTCTTCAGTATTT 58.956 37.037 21.44 10.17 46.13 1.40
2648 3294 9.092876 CATACCAAGAGAACTCTTCAGTATTTC 57.907 37.037 21.44 0.00 46.13 2.17
2649 3295 6.468543 ACCAAGAGAACTCTTCAGTATTTCC 58.531 40.000 13.26 0.00 46.13 3.13
2650 3296 6.271159 ACCAAGAGAACTCTTCAGTATTTCCT 59.729 38.462 13.26 0.00 46.13 3.36
2651 3297 6.816140 CCAAGAGAACTCTTCAGTATTTCCTC 59.184 42.308 13.26 0.00 46.13 3.71
2652 3298 6.538945 AGAGAACTCTTCAGTATTTCCTCC 57.461 41.667 0.00 0.00 36.31 4.30
2653 3299 5.423931 AGAGAACTCTTCAGTATTTCCTCCC 59.576 44.000 0.00 0.00 36.31 4.30
2654 3300 5.346270 AGAACTCTTCAGTATTTCCTCCCT 58.654 41.667 0.00 0.00 30.14 4.20
2655 3301 5.788014 AGAACTCTTCAGTATTTCCTCCCTT 59.212 40.000 0.00 0.00 30.14 3.95
2656 3302 6.273495 AGAACTCTTCAGTATTTCCTCCCTTT 59.727 38.462 0.00 0.00 30.14 3.11
2657 3303 6.056090 ACTCTTCAGTATTTCCTCCCTTTC 57.944 41.667 0.00 0.00 0.00 2.62
2658 3304 5.548056 ACTCTTCAGTATTTCCTCCCTTTCA 59.452 40.000 0.00 0.00 0.00 2.69
2659 3305 6.216456 ACTCTTCAGTATTTCCTCCCTTTCAT 59.784 38.462 0.00 0.00 0.00 2.57
2660 3306 7.032598 TCTTCAGTATTTCCTCCCTTTCATT 57.967 36.000 0.00 0.00 0.00 2.57
2661 3307 6.886459 TCTTCAGTATTTCCTCCCTTTCATTG 59.114 38.462 0.00 0.00 0.00 2.82
2662 3308 5.509498 TCAGTATTTCCTCCCTTTCATTGG 58.491 41.667 0.00 0.00 0.00 3.16
2663 3309 4.646492 CAGTATTTCCTCCCTTTCATTGGG 59.354 45.833 0.00 0.00 45.90 4.12
2664 3310 1.937191 TTTCCTCCCTTTCATTGGGC 58.063 50.000 0.00 0.00 44.23 5.36
2665 3311 1.084018 TTCCTCCCTTTCATTGGGCT 58.916 50.000 0.00 0.00 44.23 5.19
2666 3312 1.084018 TCCTCCCTTTCATTGGGCTT 58.916 50.000 0.00 0.00 44.23 4.35
2667 3313 1.188863 CCTCCCTTTCATTGGGCTTG 58.811 55.000 0.00 0.00 44.23 4.01
2668 3314 1.188863 CTCCCTTTCATTGGGCTTGG 58.811 55.000 0.00 0.00 44.23 3.61
2669 3315 0.783206 TCCCTTTCATTGGGCTTGGA 59.217 50.000 0.00 0.00 44.23 3.53
2670 3316 0.897621 CCCTTTCATTGGGCTTGGAC 59.102 55.000 0.00 0.00 37.99 4.02
2671 3317 1.550869 CCCTTTCATTGGGCTTGGACT 60.551 52.381 0.00 0.00 37.99 3.85
2672 3318 2.250924 CCTTTCATTGGGCTTGGACTT 58.749 47.619 0.00 0.00 0.00 3.01
2673 3319 2.028748 CCTTTCATTGGGCTTGGACTTG 60.029 50.000 0.00 0.00 0.00 3.16
2674 3320 2.380064 TTCATTGGGCTTGGACTTGT 57.620 45.000 0.00 0.00 0.00 3.16
2675 3321 1.909700 TCATTGGGCTTGGACTTGTC 58.090 50.000 0.00 0.00 0.00 3.18
2676 3322 1.144708 TCATTGGGCTTGGACTTGTCA 59.855 47.619 3.08 0.00 0.00 3.58
2677 3323 1.962807 CATTGGGCTTGGACTTGTCAA 59.037 47.619 3.08 0.00 0.00 3.18
2678 3324 2.151502 TTGGGCTTGGACTTGTCAAA 57.848 45.000 3.08 0.00 0.00 2.69
2679 3325 1.398692 TGGGCTTGGACTTGTCAAAC 58.601 50.000 3.08 0.00 0.00 2.93
2680 3326 1.341482 TGGGCTTGGACTTGTCAAACA 60.341 47.619 3.08 0.00 0.00 2.83
2681 3327 1.754226 GGGCTTGGACTTGTCAAACAA 59.246 47.619 3.08 0.00 36.54 2.83
2682 3328 2.481276 GGGCTTGGACTTGTCAAACAAC 60.481 50.000 3.08 0.00 33.96 3.32
2683 3329 2.165437 GGCTTGGACTTGTCAAACAACA 59.835 45.455 3.08 0.00 33.96 3.33
2684 3330 3.367910 GGCTTGGACTTGTCAAACAACAA 60.368 43.478 3.08 0.00 37.56 2.83
2685 3331 3.612423 GCTTGGACTTGTCAAACAACAAC 59.388 43.478 3.08 0.00 35.39 3.32
2686 3332 3.859411 TGGACTTGTCAAACAACAACC 57.141 42.857 3.08 0.00 35.39 3.77
2687 3333 3.426615 TGGACTTGTCAAACAACAACCT 58.573 40.909 3.08 0.00 35.39 3.50
2688 3334 3.192422 TGGACTTGTCAAACAACAACCTG 59.808 43.478 3.08 0.00 35.39 4.00
2689 3335 3.442273 GGACTTGTCAAACAACAACCTGA 59.558 43.478 3.08 0.00 35.39 3.86
2690 3336 4.412207 GACTTGTCAAACAACAACCTGAC 58.588 43.478 0.00 0.00 38.91 3.51
2691 3337 4.079253 ACTTGTCAAACAACAACCTGACT 58.921 39.130 3.06 0.00 39.15 3.41
2692 3338 4.082787 ACTTGTCAAACAACAACCTGACTG 60.083 41.667 3.06 0.00 39.15 3.51
2693 3339 2.752354 TGTCAAACAACAACCTGACTGG 59.248 45.455 0.00 0.00 39.15 4.00
2694 3340 2.099098 GTCAAACAACAACCTGACTGGG 59.901 50.000 3.15 0.00 41.11 4.45
2695 3341 1.111277 AAACAACAACCTGACTGGGC 58.889 50.000 3.15 0.00 41.11 5.36
2696 3342 0.755327 AACAACAACCTGACTGGGCC 60.755 55.000 0.00 0.00 41.11 5.80
2697 3343 1.152777 CAACAACCTGACTGGGCCA 60.153 57.895 5.85 5.85 41.11 5.36
2698 3344 0.754957 CAACAACCTGACTGGGCCAA 60.755 55.000 8.04 0.00 41.11 4.52
2699 3345 0.188342 AACAACCTGACTGGGCCAAT 59.812 50.000 8.04 0.00 41.11 3.16
2841 3487 2.214387 GCAACATGCTTAATGGGAGC 57.786 50.000 0.00 0.00 40.96 4.70
3020 3666 4.398988 TGGCATATTTCGAAATTCAGCTGT 59.601 37.500 27.10 5.20 0.00 4.40
4084 4892 0.757188 ATGTCGATCGAGCCTTCCCT 60.757 55.000 20.09 0.00 0.00 4.20
4611 5803 7.706179 ACTGAAACAACATAGGTGTGATTTTTG 59.294 33.333 0.00 0.00 38.92 2.44
4612 5804 7.776107 TGAAACAACATAGGTGTGATTTTTGA 58.224 30.769 0.00 0.00 38.92 2.69
4613 5805 7.920151 TGAAACAACATAGGTGTGATTTTTGAG 59.080 33.333 0.00 0.00 38.92 3.02
4614 5806 7.581213 AACAACATAGGTGTGATTTTTGAGA 57.419 32.000 0.00 0.00 38.92 3.27
4615 5807 7.765695 ACAACATAGGTGTGATTTTTGAGAT 57.234 32.000 0.00 0.00 38.92 2.75
4616 5808 7.596494 ACAACATAGGTGTGATTTTTGAGATG 58.404 34.615 0.00 0.00 38.92 2.90
4617 5809 7.231317 ACAACATAGGTGTGATTTTTGAGATGT 59.769 33.333 0.00 0.00 38.92 3.06
4618 5810 7.765695 ACATAGGTGTGATTTTTGAGATGTT 57.234 32.000 0.00 0.00 37.14 2.71
4620 5812 8.730680 ACATAGGTGTGATTTTTGAGATGTTAC 58.269 33.333 0.00 0.00 37.14 2.50
4667 5948 8.202745 AGTGTTATCGATTTGATTCTTCCTTC 57.797 34.615 1.71 0.00 38.57 3.46
4697 5978 6.457392 CCATGAATGTCAAATACTGAAGGACG 60.457 42.308 0.00 0.00 35.22 4.79
4712 5993 2.919228 AGGACGCTCAACTTTCAAACT 58.081 42.857 0.00 0.00 0.00 2.66
4744 6026 0.329596 CCCTAACCTGGCTCAAAGCT 59.670 55.000 0.00 0.00 41.99 3.74
4766 6048 1.074319 TTGATGGACGACGCGTTAGC 61.074 55.000 15.53 5.32 41.37 3.09
4965 7232 9.755064 ACGTTTAGAAATGTTTATGAAGAATCG 57.245 29.630 0.00 0.00 34.64 3.34
4996 7266 7.761038 ATGATGTTCATGAATGCTCATACAT 57.239 32.000 20.11 13.89 41.12 2.29
5011 7281 8.114331 TGCTCATACATGATTTTTGAAGTTCT 57.886 30.769 0.00 0.00 36.02 3.01
5022 7292 8.040132 TGATTTTTGAAGTTCTGGACATGTTTT 58.960 29.630 0.00 0.00 0.00 2.43
5110 7387 4.803613 AGGAAAACGTGTTTTGAAATGAGC 59.196 37.500 14.88 0.00 42.26 4.26
5132 7411 7.337689 TGAGCAATATTATTTCAGCTCTGTTGT 59.662 33.333 19.68 0.00 46.31 3.32
5270 8124 6.956520 CGTGTATACATAACGAAATTGTTGCA 59.043 34.615 9.18 0.00 39.64 4.08
5272 8126 9.923786 GTGTATACATAACGAAATTGTTGCATA 57.076 29.630 9.18 0.00 33.32 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 71 9.310716 GATTGAATTGTACTAGGTGTTAGGTAC 57.689 37.037 0.00 0.00 33.42 3.34
102 107 4.097437 CCAAACATTCCTCTCCACATGATG 59.903 45.833 0.00 0.00 0.00 3.07
160 167 2.881074 CTCCACACGAACTACCTGATG 58.119 52.381 0.00 0.00 0.00 3.07
250 274 2.785258 GTCCATCTTTGTCGCGCC 59.215 61.111 0.00 0.00 0.00 6.53
279 303 1.901464 GAAGAAACGGGGCAAGCCA 60.901 57.895 13.87 0.00 37.98 4.75
432 505 3.136626 AGGGGAGCATCAGTTACCATTAC 59.863 47.826 0.00 0.00 36.25 1.89
487 574 3.643320 TGCAACCCAAAATCCACACAATA 59.357 39.130 0.00 0.00 0.00 1.90
540 644 1.667236 TGTGTGCTTGAACCAGTCTG 58.333 50.000 0.00 0.00 0.00 3.51
563 667 6.775142 TGTGAGAGGTTTATGTGGATGAAAAA 59.225 34.615 0.00 0.00 0.00 1.94
564 668 6.303054 TGTGAGAGGTTTATGTGGATGAAAA 58.697 36.000 0.00 0.00 0.00 2.29
565 669 5.875224 TGTGAGAGGTTTATGTGGATGAAA 58.125 37.500 0.00 0.00 0.00 2.69
566 670 5.497464 TGTGAGAGGTTTATGTGGATGAA 57.503 39.130 0.00 0.00 0.00 2.57
567 671 5.013079 ACTTGTGAGAGGTTTATGTGGATGA 59.987 40.000 0.00 0.00 0.00 2.92
568 672 5.248640 ACTTGTGAGAGGTTTATGTGGATG 58.751 41.667 0.00 0.00 0.00 3.51
569 673 5.505181 ACTTGTGAGAGGTTTATGTGGAT 57.495 39.130 0.00 0.00 0.00 3.41
570 674 4.974645 ACTTGTGAGAGGTTTATGTGGA 57.025 40.909 0.00 0.00 0.00 4.02
571 675 4.455877 GGAACTTGTGAGAGGTTTATGTGG 59.544 45.833 0.00 0.00 0.00 4.17
572 676 5.308825 AGGAACTTGTGAGAGGTTTATGTG 58.691 41.667 0.00 0.00 27.25 3.21
573 677 5.568620 AGGAACTTGTGAGAGGTTTATGT 57.431 39.130 0.00 0.00 27.25 2.29
587 691 3.703316 GCCTGAGCACAGAAGGAACTTG 61.703 54.545 13.19 0.00 44.97 3.16
588 692 1.544314 GCCTGAGCACAGAAGGAACTT 60.544 52.381 13.19 0.00 46.90 2.66
589 693 0.036022 GCCTGAGCACAGAAGGAACT 59.964 55.000 13.19 0.00 46.03 3.01
590 694 0.957888 GGCCTGAGCACAGAAGGAAC 60.958 60.000 13.19 0.00 46.03 3.62
591 695 1.130054 AGGCCTGAGCACAGAAGGAA 61.130 55.000 13.19 0.00 46.03 3.36
592 696 1.130054 AAGGCCTGAGCACAGAAGGA 61.130 55.000 5.69 0.00 46.03 3.36
593 697 0.251077 AAAGGCCTGAGCACAGAAGG 60.251 55.000 5.69 0.00 46.03 3.46
594 698 1.613836 AAAAGGCCTGAGCACAGAAG 58.386 50.000 5.69 0.00 46.03 2.85
595 699 1.956477 GAAAAAGGCCTGAGCACAGAA 59.044 47.619 5.69 0.00 46.03 3.02
596 700 1.133823 TGAAAAAGGCCTGAGCACAGA 60.134 47.619 5.69 0.00 46.03 3.41
597 701 1.268899 CTGAAAAAGGCCTGAGCACAG 59.731 52.381 5.69 9.37 42.56 3.66
598 702 1.321474 CTGAAAAAGGCCTGAGCACA 58.679 50.000 5.69 2.71 42.56 4.57
599 703 1.268079 GACTGAAAAAGGCCTGAGCAC 59.732 52.381 5.69 0.00 42.56 4.40
600 704 1.133823 TGACTGAAAAAGGCCTGAGCA 60.134 47.619 5.69 1.34 42.56 4.26
601 705 1.609208 TGACTGAAAAAGGCCTGAGC 58.391 50.000 5.69 0.00 29.74 4.26
602 706 5.964958 TTTATGACTGAAAAAGGCCTGAG 57.035 39.130 5.69 0.00 29.74 3.35
603 707 7.669722 ACTTATTTATGACTGAAAAAGGCCTGA 59.330 33.333 5.69 0.00 29.74 3.86
604 708 7.756722 CACTTATTTATGACTGAAAAAGGCCTG 59.243 37.037 5.69 0.00 29.74 4.85
605 709 7.093771 CCACTTATTTATGACTGAAAAAGGCCT 60.094 37.037 0.00 0.00 29.74 5.19
606 710 7.035612 CCACTTATTTATGACTGAAAAAGGCC 58.964 38.462 0.00 0.00 29.74 5.19
607 711 6.531594 GCCACTTATTTATGACTGAAAAAGGC 59.468 38.462 0.00 0.00 0.00 4.35
608 712 7.542130 GTGCCACTTATTTATGACTGAAAAAGG 59.458 37.037 0.00 0.00 0.00 3.11
609 713 8.299570 AGTGCCACTTATTTATGACTGAAAAAG 58.700 33.333 0.00 0.00 0.00 2.27
610 714 8.081633 CAGTGCCACTTATTTATGACTGAAAAA 58.918 33.333 0.00 0.00 32.98 1.94
611 715 7.446931 TCAGTGCCACTTATTTATGACTGAAAA 59.553 33.333 0.00 0.00 36.53 2.29
612 716 6.939730 TCAGTGCCACTTATTTATGACTGAAA 59.060 34.615 0.00 0.00 36.53 2.69
613 717 6.472016 TCAGTGCCACTTATTTATGACTGAA 58.528 36.000 0.00 0.00 36.53 3.02
614 718 6.048732 TCAGTGCCACTTATTTATGACTGA 57.951 37.500 0.00 0.00 36.98 3.41
615 719 6.372659 ACTTCAGTGCCACTTATTTATGACTG 59.627 38.462 0.00 0.00 0.00 3.51
616 720 6.476378 ACTTCAGTGCCACTTATTTATGACT 58.524 36.000 0.00 0.00 0.00 3.41
617 721 6.371548 TGACTTCAGTGCCACTTATTTATGAC 59.628 38.462 0.00 0.00 0.00 3.06
618 722 6.472016 TGACTTCAGTGCCACTTATTTATGA 58.528 36.000 0.00 0.00 0.00 2.15
619 723 6.741992 TGACTTCAGTGCCACTTATTTATG 57.258 37.500 0.00 0.00 0.00 1.90
620 724 7.168219 TCTTGACTTCAGTGCCACTTATTTAT 58.832 34.615 0.00 0.00 0.00 1.40
621 725 6.530120 TCTTGACTTCAGTGCCACTTATTTA 58.470 36.000 0.00 0.00 0.00 1.40
622 726 5.376625 TCTTGACTTCAGTGCCACTTATTT 58.623 37.500 0.00 0.00 0.00 1.40
623 727 4.973168 TCTTGACTTCAGTGCCACTTATT 58.027 39.130 0.00 0.00 0.00 1.40
624 728 4.623932 TCTTGACTTCAGTGCCACTTAT 57.376 40.909 0.00 0.00 0.00 1.73
625 729 4.100963 TCTTCTTGACTTCAGTGCCACTTA 59.899 41.667 0.00 0.00 0.00 2.24
626 730 3.118261 TCTTCTTGACTTCAGTGCCACTT 60.118 43.478 0.00 0.00 0.00 3.16
627 731 2.435805 TCTTCTTGACTTCAGTGCCACT 59.564 45.455 0.00 0.00 0.00 4.00
628 732 2.838736 TCTTCTTGACTTCAGTGCCAC 58.161 47.619 0.00 0.00 0.00 5.01
629 733 3.118261 ACTTCTTCTTGACTTCAGTGCCA 60.118 43.478 0.00 0.00 0.00 4.92
630 734 3.471680 ACTTCTTCTTGACTTCAGTGCC 58.528 45.455 0.00 0.00 0.00 5.01
631 735 5.065218 TGAAACTTCTTCTTGACTTCAGTGC 59.935 40.000 0.00 0.00 0.00 4.40
632 736 6.668541 TGAAACTTCTTCTTGACTTCAGTG 57.331 37.500 0.00 0.00 0.00 3.66
633 737 6.881602 AGTTGAAACTTCTTCTTGACTTCAGT 59.118 34.615 0.00 0.00 35.21 3.41
634 738 7.313951 AGTTGAAACTTCTTCTTGACTTCAG 57.686 36.000 0.00 0.00 35.21 3.02
635 739 6.316390 GGAGTTGAAACTTCTTCTTGACTTCA 59.684 38.462 0.00 0.00 39.88 3.02
636 740 6.238511 GGGAGTTGAAACTTCTTCTTGACTTC 60.239 42.308 1.61 0.00 39.88 3.01
637 741 5.590663 GGGAGTTGAAACTTCTTCTTGACTT 59.409 40.000 1.61 0.00 39.88 3.01
638 742 5.126779 GGGAGTTGAAACTTCTTCTTGACT 58.873 41.667 1.61 0.00 39.88 3.41
639 743 4.276183 GGGGAGTTGAAACTTCTTCTTGAC 59.724 45.833 1.61 0.00 39.88 3.18
640 744 4.166144 AGGGGAGTTGAAACTTCTTCTTGA 59.834 41.667 1.61 0.00 39.88 3.02
641 745 4.464947 AGGGGAGTTGAAACTTCTTCTTG 58.535 43.478 1.61 0.00 39.88 3.02
642 746 4.797912 AGGGGAGTTGAAACTTCTTCTT 57.202 40.909 1.61 0.00 39.88 2.52
643 747 6.455690 AATAGGGGAGTTGAAACTTCTTCT 57.544 37.500 1.61 3.20 39.88 2.85
644 748 5.648526 GGAATAGGGGAGTTGAAACTTCTTC 59.351 44.000 1.61 0.00 39.88 2.87
645 749 5.313506 AGGAATAGGGGAGTTGAAACTTCTT 59.686 40.000 1.61 0.00 39.88 2.52
646 750 4.852697 AGGAATAGGGGAGTTGAAACTTCT 59.147 41.667 1.61 1.88 39.88 2.85
647 751 5.045505 AGAGGAATAGGGGAGTTGAAACTTC 60.046 44.000 0.00 0.00 39.88 3.01
648 752 4.852697 AGAGGAATAGGGGAGTTGAAACTT 59.147 41.667 0.00 0.00 39.88 2.66
649 753 4.439860 AGAGGAATAGGGGAGTTGAAACT 58.560 43.478 0.00 0.00 43.16 2.66
650 754 4.846168 AGAGGAATAGGGGAGTTGAAAC 57.154 45.455 0.00 0.00 0.00 2.78
651 755 8.263854 CTATTAGAGGAATAGGGGAGTTGAAA 57.736 38.462 0.00 0.00 42.36 2.69
652 756 7.857404 CTATTAGAGGAATAGGGGAGTTGAA 57.143 40.000 0.00 0.00 42.36 2.69
676 780 3.680196 GCTCTGTGGTTCAGGAAGTATCC 60.680 52.174 0.00 0.00 46.98 2.59
677 781 3.526534 GCTCTGTGGTTCAGGAAGTATC 58.473 50.000 0.00 0.00 43.76 2.24
678 782 2.237392 GGCTCTGTGGTTCAGGAAGTAT 59.763 50.000 0.00 0.00 43.76 2.12
679 783 1.623811 GGCTCTGTGGTTCAGGAAGTA 59.376 52.381 0.00 0.00 43.76 2.24
680 784 0.398318 GGCTCTGTGGTTCAGGAAGT 59.602 55.000 0.00 0.00 43.76 3.01
681 785 0.397941 TGGCTCTGTGGTTCAGGAAG 59.602 55.000 0.00 0.00 43.76 3.46
682 786 0.843309 TTGGCTCTGTGGTTCAGGAA 59.157 50.000 0.00 0.00 43.76 3.36
683 787 0.108585 GTTGGCTCTGTGGTTCAGGA 59.891 55.000 0.00 0.00 43.76 3.86
684 788 0.890996 GGTTGGCTCTGTGGTTCAGG 60.891 60.000 0.00 0.00 43.76 3.86
685 789 1.230635 CGGTTGGCTCTGTGGTTCAG 61.231 60.000 0.00 0.00 44.85 3.02
686 790 1.227823 CGGTTGGCTCTGTGGTTCA 60.228 57.895 0.00 0.00 0.00 3.18
687 791 0.034337 TACGGTTGGCTCTGTGGTTC 59.966 55.000 5.31 0.00 0.00 3.62
688 792 0.034896 CTACGGTTGGCTCTGTGGTT 59.965 55.000 5.31 0.00 0.00 3.67
689 793 1.671742 CTACGGTTGGCTCTGTGGT 59.328 57.895 5.31 0.00 0.00 4.16
690 794 1.741770 GCTACGGTTGGCTCTGTGG 60.742 63.158 5.31 3.87 0.00 4.17
691 795 0.602638 TTGCTACGGTTGGCTCTGTG 60.603 55.000 7.17 0.00 0.00 3.66
692 796 0.324943 ATTGCTACGGTTGGCTCTGT 59.675 50.000 7.17 0.00 0.00 3.41
693 797 0.729116 CATTGCTACGGTTGGCTCTG 59.271 55.000 7.17 2.36 0.00 3.35
694 798 0.324943 ACATTGCTACGGTTGGCTCT 59.675 50.000 7.17 0.00 0.00 4.09
695 799 0.447801 CACATTGCTACGGTTGGCTC 59.552 55.000 7.17 0.00 0.00 4.70
696 800 1.586154 GCACATTGCTACGGTTGGCT 61.586 55.000 7.17 0.00 40.96 4.75
697 801 1.154035 GCACATTGCTACGGTTGGC 60.154 57.895 0.00 0.00 40.96 4.52
698 802 1.506262 GGCACATTGCTACGGTTGG 59.494 57.895 0.00 0.00 44.28 3.77
699 803 1.134487 CGGCACATTGCTACGGTTG 59.866 57.895 0.00 0.00 44.28 3.77
700 804 0.037139 TACGGCACATTGCTACGGTT 60.037 50.000 0.00 0.00 44.28 4.44
701 805 0.177141 ATACGGCACATTGCTACGGT 59.823 50.000 0.00 0.00 44.28 4.83
702 806 1.790623 GTATACGGCACATTGCTACGG 59.209 52.381 0.00 0.00 44.28 4.02
703 807 2.465855 TGTATACGGCACATTGCTACG 58.534 47.619 0.00 0.00 44.28 3.51
704 808 4.868450 TTTGTATACGGCACATTGCTAC 57.132 40.909 0.00 0.00 44.28 3.58
705 809 6.443934 AAATTTGTATACGGCACATTGCTA 57.556 33.333 0.00 0.00 44.28 3.49
706 810 4.981806 AATTTGTATACGGCACATTGCT 57.018 36.364 0.00 0.00 44.28 3.91
707 811 5.220378 CCAAAATTTGTATACGGCACATTGC 60.220 40.000 4.92 0.00 44.08 3.56
708 812 5.866633 ACCAAAATTTGTATACGGCACATTG 59.133 36.000 4.92 0.20 0.00 2.82
709 813 6.031751 ACCAAAATTTGTATACGGCACATT 57.968 33.333 4.92 0.00 0.00 2.71
710 814 5.652994 ACCAAAATTTGTATACGGCACAT 57.347 34.783 4.92 0.00 0.00 3.21
711 815 5.455056 AACCAAAATTTGTATACGGCACA 57.545 34.783 4.92 0.00 0.00 4.57
712 816 6.614160 AGTAACCAAAATTTGTATACGGCAC 58.386 36.000 4.92 0.00 0.00 5.01
713 817 6.821031 AGTAACCAAAATTTGTATACGGCA 57.179 33.333 4.92 0.00 0.00 5.69
714 818 8.523523 AAAAGTAACCAAAATTTGTATACGGC 57.476 30.769 4.92 0.00 0.00 5.68
715 819 9.902196 AGAAAAGTAACCAAAATTTGTATACGG 57.098 29.630 4.92 0.00 0.00 4.02
726 830 9.569122 AGCTGAATAGTAGAAAAGTAACCAAAA 57.431 29.630 0.00 0.00 0.00 2.44
727 831 9.216117 GAGCTGAATAGTAGAAAAGTAACCAAA 57.784 33.333 0.00 0.00 0.00 3.28
728 832 8.372459 TGAGCTGAATAGTAGAAAAGTAACCAA 58.628 33.333 0.00 0.00 0.00 3.67
729 833 7.817962 GTGAGCTGAATAGTAGAAAAGTAACCA 59.182 37.037 0.00 0.00 0.00 3.67
730 834 7.278203 GGTGAGCTGAATAGTAGAAAAGTAACC 59.722 40.741 0.00 0.00 0.00 2.85
731 835 7.817962 TGGTGAGCTGAATAGTAGAAAAGTAAC 59.182 37.037 0.00 0.00 0.00 2.50
732 836 7.903145 TGGTGAGCTGAATAGTAGAAAAGTAA 58.097 34.615 0.00 0.00 0.00 2.24
733 837 7.476540 TGGTGAGCTGAATAGTAGAAAAGTA 57.523 36.000 0.00 0.00 0.00 2.24
734 838 6.360370 TGGTGAGCTGAATAGTAGAAAAGT 57.640 37.500 0.00 0.00 0.00 2.66
735 839 7.672983 TTTGGTGAGCTGAATAGTAGAAAAG 57.327 36.000 0.00 0.00 0.00 2.27
736 840 9.905713 ATATTTGGTGAGCTGAATAGTAGAAAA 57.094 29.630 0.00 0.00 0.00 2.29
737 841 9.905713 AATATTTGGTGAGCTGAATAGTAGAAA 57.094 29.630 0.00 0.00 0.00 2.52
738 842 9.905713 AAATATTTGGTGAGCTGAATAGTAGAA 57.094 29.630 0.00 0.00 0.00 2.10
739 843 9.547753 GAAATATTTGGTGAGCTGAATAGTAGA 57.452 33.333 5.17 0.00 0.00 2.59
740 844 8.778358 GGAAATATTTGGTGAGCTGAATAGTAG 58.222 37.037 5.17 0.00 0.00 2.57
741 845 8.271458 TGGAAATATTTGGTGAGCTGAATAGTA 58.729 33.333 5.17 0.00 0.00 1.82
742 846 7.118723 TGGAAATATTTGGTGAGCTGAATAGT 58.881 34.615 5.17 0.00 0.00 2.12
743 847 7.572523 TGGAAATATTTGGTGAGCTGAATAG 57.427 36.000 5.17 0.00 0.00 1.73
744 848 7.014518 CCATGGAAATATTTGGTGAGCTGAATA 59.985 37.037 5.56 0.00 0.00 1.75
745 849 6.183360 CCATGGAAATATTTGGTGAGCTGAAT 60.183 38.462 5.56 0.00 0.00 2.57
746 850 5.127519 CCATGGAAATATTTGGTGAGCTGAA 59.872 40.000 5.56 0.00 0.00 3.02
747 851 4.646040 CCATGGAAATATTTGGTGAGCTGA 59.354 41.667 5.56 0.00 0.00 4.26
748 852 4.646040 TCCATGGAAATATTTGGTGAGCTG 59.354 41.667 13.46 0.00 0.00 4.24
749 853 4.870636 TCCATGGAAATATTTGGTGAGCT 58.129 39.130 13.46 0.00 0.00 4.09
750 854 5.535333 CATCCATGGAAATATTTGGTGAGC 58.465 41.667 20.67 0.00 0.00 4.26
766 870 1.063038 TCCCAAATCCACCCATCCATG 60.063 52.381 0.00 0.00 0.00 3.66
767 871 1.218704 CTCCCAAATCCACCCATCCAT 59.781 52.381 0.00 0.00 0.00 3.41
768 872 0.630673 CTCCCAAATCCACCCATCCA 59.369 55.000 0.00 0.00 0.00 3.41
769 873 0.926293 TCTCCCAAATCCACCCATCC 59.074 55.000 0.00 0.00 0.00 3.51
770 874 2.826674 TTCTCCCAAATCCACCCATC 57.173 50.000 0.00 0.00 0.00 3.51
771 875 4.898014 TTATTCTCCCAAATCCACCCAT 57.102 40.909 0.00 0.00 0.00 4.00
772 876 4.898014 ATTATTCTCCCAAATCCACCCA 57.102 40.909 0.00 0.00 0.00 4.51
773 877 7.290014 ACAAATATTATTCTCCCAAATCCACCC 59.710 37.037 0.00 0.00 0.00 4.61
774 878 8.250143 ACAAATATTATTCTCCCAAATCCACC 57.750 34.615 0.00 0.00 0.00 4.61
775 879 9.750125 GAACAAATATTATTCTCCCAAATCCAC 57.250 33.333 5.50 0.00 0.00 4.02
776 880 8.923270 GGAACAAATATTATTCTCCCAAATCCA 58.077 33.333 10.59 0.00 0.00 3.41
777 881 9.147732 AGGAACAAATATTATTCTCCCAAATCC 57.852 33.333 10.59 0.00 0.00 3.01
780 884 9.540538 TCAAGGAACAAATATTATTCTCCCAAA 57.459 29.630 10.59 0.00 0.00 3.28
781 885 9.713684 ATCAAGGAACAAATATTATTCTCCCAA 57.286 29.630 10.59 0.00 0.00 4.12
802 906 5.545658 AACGTGTGCATAAACCTATCAAG 57.454 39.130 0.00 0.00 0.00 3.02
803 907 5.950758 AAACGTGTGCATAAACCTATCAA 57.049 34.783 0.00 0.00 0.00 2.57
804 908 5.703592 AGAAAACGTGTGCATAAACCTATCA 59.296 36.000 0.00 0.00 0.00 2.15
805 909 6.178239 AGAAAACGTGTGCATAAACCTATC 57.822 37.500 0.00 0.00 0.00 2.08
806 910 6.569179 AAGAAAACGTGTGCATAAACCTAT 57.431 33.333 0.00 0.00 0.00 2.57
807 911 6.380095 AAAGAAAACGTGTGCATAAACCTA 57.620 33.333 0.00 0.00 0.00 3.08
808 912 4.911514 AAGAAAACGTGTGCATAAACCT 57.088 36.364 0.00 0.00 0.00 3.50
841 946 4.450080 GCAGAAAAAGAATTTGCAAGAGGG 59.550 41.667 0.00 0.00 39.02 4.30
847 952 3.494749 CCTGGGCAGAAAAAGAATTTGCA 60.495 43.478 0.00 0.00 39.02 4.08
848 953 3.069289 CCTGGGCAGAAAAAGAATTTGC 58.931 45.455 0.00 0.00 39.02 3.68
856 961 4.346418 TGAAAAATAGCCTGGGCAGAAAAA 59.654 37.500 14.39 0.00 44.88 1.94
861 966 3.448301 TGATTGAAAAATAGCCTGGGCAG 59.552 43.478 14.39 0.00 44.88 4.85
911 1376 2.581246 GGAAGGGTAGGGGAGTTGAAAT 59.419 50.000 0.00 0.00 0.00 2.17
947 1453 9.973450 TGCTTATTAAAATATGTTTGTGTGTGT 57.027 25.926 0.00 0.00 0.00 3.72
949 1455 9.973450 TGTGCTTATTAAAATATGTTTGTGTGT 57.027 25.926 0.00 0.00 0.00 3.72
953 1459 9.855021 GGAGTGTGCTTATTAAAATATGTTTGT 57.145 29.630 0.00 0.00 0.00 2.83
954 1460 9.853555 TGGAGTGTGCTTATTAAAATATGTTTG 57.146 29.630 0.00 0.00 0.00 2.93
1027 1536 1.957877 GTAGGACGGAGGAATCAGAGG 59.042 57.143 0.00 0.00 0.00 3.69
1045 1554 5.003804 GCAAAGAAGGAAGAGTGATTGGTA 58.996 41.667 0.00 0.00 0.00 3.25
1050 1559 3.181440 TGGTGCAAAGAAGGAAGAGTGAT 60.181 43.478 0.00 0.00 0.00 3.06
1051 1560 2.172505 TGGTGCAAAGAAGGAAGAGTGA 59.827 45.455 0.00 0.00 0.00 3.41
1116 1625 1.953686 TCTGTTTTGTTGGTAGCCTGC 59.046 47.619 0.00 0.00 0.00 4.85
1134 1643 0.179034 GGGCTTGCCGATCATCTTCT 60.179 55.000 5.49 0.00 0.00 2.85
1143 1652 2.665000 CAGAGAAGGGCTTGCCGA 59.335 61.111 5.49 0.00 0.00 5.54
1442 1951 2.582052 TGTTACCTGAAAGCCTGTTGG 58.418 47.619 0.00 0.00 0.00 3.77
1933 2442 2.175878 AATCTATTGCTGCCTAGGCG 57.824 50.000 28.28 22.48 45.51 5.52
1947 2456 6.096987 CAGAAGGTAGCTGTCCAGTAAATCTA 59.903 42.308 11.41 0.00 0.00 1.98
2190 2699 3.582647 TGCAATTGGTCAGAGAGGTAAGA 59.417 43.478 7.72 0.00 0.00 2.10
2214 2723 8.509690 CCATCTGCTGATAATATTAACAACTGG 58.490 37.037 5.70 3.68 0.00 4.00
2348 2857 3.007398 AGTGAGACTTACAAGCTTCCCTG 59.993 47.826 0.00 0.00 0.00 4.45
2563 3209 2.372264 CAGCCTGTTGCATTGTCCTAT 58.628 47.619 0.00 0.00 44.83 2.57
2564 3210 1.825090 CAGCCTGTTGCATTGTCCTA 58.175 50.000 0.00 0.00 44.83 2.94
2565 3211 1.530013 GCAGCCTGTTGCATTGTCCT 61.530 55.000 0.81 0.00 44.83 3.85
2566 3212 1.080298 GCAGCCTGTTGCATTGTCC 60.080 57.895 0.81 0.00 44.83 4.02
2567 3213 0.316204 AAGCAGCCTGTTGCATTGTC 59.684 50.000 8.68 0.00 46.47 3.18
2568 3214 1.619654 TAAGCAGCCTGTTGCATTGT 58.380 45.000 8.68 0.00 46.47 2.71
2569 3215 2.536365 CATAAGCAGCCTGTTGCATTG 58.464 47.619 8.68 0.00 46.47 2.82
2570 3216 1.134907 GCATAAGCAGCCTGTTGCATT 60.135 47.619 8.68 3.10 46.47 3.56
2571 3217 0.458669 GCATAAGCAGCCTGTTGCAT 59.541 50.000 8.68 0.00 46.47 3.96
2572 3218 0.609957 AGCATAAGCAGCCTGTTGCA 60.610 50.000 8.68 0.00 46.47 4.08
2573 3219 1.382522 TAGCATAAGCAGCCTGTTGC 58.617 50.000 0.00 0.00 45.49 4.17
2574 3220 3.191162 TGTTTAGCATAAGCAGCCTGTTG 59.809 43.478 0.00 0.00 45.49 3.33
2575 3221 3.420893 TGTTTAGCATAAGCAGCCTGTT 58.579 40.909 0.00 0.00 45.49 3.16
2576 3222 3.071874 TGTTTAGCATAAGCAGCCTGT 57.928 42.857 0.00 0.00 45.49 4.00
2577 3223 3.379372 ACATGTTTAGCATAAGCAGCCTG 59.621 43.478 0.00 0.00 45.49 4.85
2578 3224 3.624777 ACATGTTTAGCATAAGCAGCCT 58.375 40.909 0.00 0.00 45.49 4.58
2579 3225 3.378112 TGACATGTTTAGCATAAGCAGCC 59.622 43.478 0.00 0.00 45.49 4.85
2580 3226 4.095483 ACTGACATGTTTAGCATAAGCAGC 59.905 41.667 0.00 0.00 45.49 5.25
2581 3227 5.808042 ACTGACATGTTTAGCATAAGCAG 57.192 39.130 0.00 0.87 45.49 4.24
2582 3228 7.361713 GGTTAACTGACATGTTTAGCATAAGCA 60.362 37.037 20.01 5.85 45.49 3.91
2583 3229 6.967199 GGTTAACTGACATGTTTAGCATAAGC 59.033 38.462 0.00 10.50 42.56 3.09
2584 3230 7.962918 GTGGTTAACTGACATGTTTAGCATAAG 59.037 37.037 0.00 0.00 38.54 1.73
2585 3231 7.094549 GGTGGTTAACTGACATGTTTAGCATAA 60.095 37.037 0.00 3.37 38.54 1.90
2586 3232 6.373216 GGTGGTTAACTGACATGTTTAGCATA 59.627 38.462 0.00 0.00 38.54 3.14
2587 3233 5.183140 GGTGGTTAACTGACATGTTTAGCAT 59.817 40.000 0.00 0.00 38.54 3.79
2588 3234 4.517453 GGTGGTTAACTGACATGTTTAGCA 59.483 41.667 0.00 0.00 35.55 3.49
2589 3235 4.760204 AGGTGGTTAACTGACATGTTTAGC 59.240 41.667 0.00 0.00 0.00 3.09
2590 3236 6.485313 TCAAGGTGGTTAACTGACATGTTTAG 59.515 38.462 0.00 4.60 0.00 1.85
2591 3237 6.358178 TCAAGGTGGTTAACTGACATGTTTA 58.642 36.000 0.00 0.00 0.00 2.01
2592 3238 5.197451 TCAAGGTGGTTAACTGACATGTTT 58.803 37.500 0.00 0.00 0.00 2.83
2593 3239 4.787551 TCAAGGTGGTTAACTGACATGTT 58.212 39.130 0.00 0.00 0.00 2.71
2594 3240 4.431416 TCAAGGTGGTTAACTGACATGT 57.569 40.909 0.00 0.00 0.00 3.21
2595 3241 4.156556 CCATCAAGGTGGTTAACTGACATG 59.843 45.833 5.42 6.35 34.46 3.21
2596 3242 4.042809 TCCATCAAGGTGGTTAACTGACAT 59.957 41.667 5.42 0.00 40.27 3.06
2597 3243 3.392947 TCCATCAAGGTGGTTAACTGACA 59.607 43.478 5.42 0.00 40.27 3.58
2598 3244 4.015872 TCCATCAAGGTGGTTAACTGAC 57.984 45.455 5.42 2.87 40.27 3.51
2599 3245 4.324254 GGATCCATCAAGGTGGTTAACTGA 60.324 45.833 6.95 1.18 40.27 3.41
2600 3246 3.947834 GGATCCATCAAGGTGGTTAACTG 59.052 47.826 6.95 0.00 40.27 3.16
2601 3247 3.591527 TGGATCCATCAAGGTGGTTAACT 59.408 43.478 11.44 0.00 40.27 2.24
2602 3248 3.963129 TGGATCCATCAAGGTGGTTAAC 58.037 45.455 11.44 0.00 40.27 2.01
2603 3249 4.879295 ATGGATCCATCAAGGTGGTTAA 57.121 40.909 22.15 0.00 40.27 2.01
2604 3250 4.104102 GGTATGGATCCATCAAGGTGGTTA 59.896 45.833 30.61 6.46 40.27 2.85
2605 3251 3.117512 GGTATGGATCCATCAAGGTGGTT 60.118 47.826 30.61 6.45 40.27 3.67
2606 3252 2.443255 GGTATGGATCCATCAAGGTGGT 59.557 50.000 30.61 7.24 40.27 4.16
2607 3253 2.442878 TGGTATGGATCCATCAAGGTGG 59.557 50.000 30.61 0.00 40.76 4.61
2608 3254 3.862877 TGGTATGGATCCATCAAGGTG 57.137 47.619 30.61 0.00 37.82 4.00
2609 3255 4.047166 TCTTGGTATGGATCCATCAAGGT 58.953 43.478 34.23 18.20 38.11 3.50
2610 3256 4.349048 TCTCTTGGTATGGATCCATCAAGG 59.651 45.833 34.23 28.10 38.11 3.61
2611 3257 5.557576 TCTCTTGGTATGGATCCATCAAG 57.442 43.478 31.96 31.96 38.51 3.02
2612 3258 5.429762 AGTTCTCTTGGTATGGATCCATCAA 59.570 40.000 30.61 25.17 37.82 2.57
2613 3259 4.971282 AGTTCTCTTGGTATGGATCCATCA 59.029 41.667 30.61 20.10 37.82 3.07
2614 3260 5.306678 AGAGTTCTCTTGGTATGGATCCATC 59.693 44.000 30.61 20.32 37.82 3.51
2615 3261 5.222870 AGAGTTCTCTTGGTATGGATCCAT 58.777 41.667 29.66 29.66 40.19 3.41
2616 3262 4.624913 AGAGTTCTCTTGGTATGGATCCA 58.375 43.478 18.88 18.88 0.00 3.41
2617 3263 5.129485 TGAAGAGTTCTCTTGGTATGGATCC 59.871 44.000 18.09 4.20 0.00 3.36
2618 3264 6.127196 ACTGAAGAGTTCTCTTGGTATGGATC 60.127 42.308 18.09 3.32 0.00 3.36
2619 3265 5.723887 ACTGAAGAGTTCTCTTGGTATGGAT 59.276 40.000 18.09 0.00 0.00 3.41
2620 3266 5.087323 ACTGAAGAGTTCTCTTGGTATGGA 58.913 41.667 18.09 0.00 0.00 3.41
2621 3267 5.413309 ACTGAAGAGTTCTCTTGGTATGG 57.587 43.478 18.09 5.92 0.00 2.74
2622 3268 9.092876 GAAATACTGAAGAGTTCTCTTGGTATG 57.907 37.037 18.09 7.29 31.75 2.39
2623 3269 8.261522 GGAAATACTGAAGAGTTCTCTTGGTAT 58.738 37.037 18.09 19.06 33.21 2.73
2624 3270 7.455008 AGGAAATACTGAAGAGTTCTCTTGGTA 59.545 37.037 18.09 18.02 33.21 3.25
2625 3271 6.271159 AGGAAATACTGAAGAGTTCTCTTGGT 59.729 38.462 18.09 16.81 33.21 3.67
2626 3272 6.706295 AGGAAATACTGAAGAGTTCTCTTGG 58.294 40.000 18.09 12.88 33.21 3.61
2627 3273 6.816140 GGAGGAAATACTGAAGAGTTCTCTTG 59.184 42.308 18.09 8.60 33.21 3.02
2628 3274 6.070481 GGGAGGAAATACTGAAGAGTTCTCTT 60.070 42.308 13.91 13.91 33.21 2.85
2629 3275 5.423931 GGGAGGAAATACTGAAGAGTTCTCT 59.576 44.000 0.00 0.00 33.21 3.10
2630 3276 5.423931 AGGGAGGAAATACTGAAGAGTTCTC 59.576 44.000 0.00 0.00 33.21 2.87
2631 3277 5.346270 AGGGAGGAAATACTGAAGAGTTCT 58.654 41.667 0.00 0.00 33.21 3.01
2632 3278 5.685520 AGGGAGGAAATACTGAAGAGTTC 57.314 43.478 0.00 0.00 33.21 3.01
2633 3279 6.044404 TGAAAGGGAGGAAATACTGAAGAGTT 59.956 38.462 0.00 0.00 33.21 3.01
2634 3280 5.548056 TGAAAGGGAGGAAATACTGAAGAGT 59.452 40.000 0.00 0.00 36.07 3.24
2635 3281 6.054860 TGAAAGGGAGGAAATACTGAAGAG 57.945 41.667 0.00 0.00 0.00 2.85
2636 3282 6.642733 ATGAAAGGGAGGAAATACTGAAGA 57.357 37.500 0.00 0.00 0.00 2.87
2637 3283 6.096001 CCAATGAAAGGGAGGAAATACTGAAG 59.904 42.308 0.00 0.00 0.00 3.02
2638 3284 5.951747 CCAATGAAAGGGAGGAAATACTGAA 59.048 40.000 0.00 0.00 0.00 3.02
2639 3285 5.509498 CCAATGAAAGGGAGGAAATACTGA 58.491 41.667 0.00 0.00 0.00 3.41
2640 3286 5.841957 CCAATGAAAGGGAGGAAATACTG 57.158 43.478 0.00 0.00 0.00 2.74
2652 3298 1.928868 AGTCCAAGCCCAATGAAAGG 58.071 50.000 0.00 0.00 0.00 3.11
2653 3299 2.629617 ACAAGTCCAAGCCCAATGAAAG 59.370 45.455 0.00 0.00 0.00 2.62
2654 3300 2.627699 GACAAGTCCAAGCCCAATGAAA 59.372 45.455 0.00 0.00 0.00 2.69
2655 3301 2.238521 GACAAGTCCAAGCCCAATGAA 58.761 47.619 0.00 0.00 0.00 2.57
2656 3302 1.144708 TGACAAGTCCAAGCCCAATGA 59.855 47.619 0.00 0.00 0.00 2.57
2657 3303 1.619654 TGACAAGTCCAAGCCCAATG 58.380 50.000 0.00 0.00 0.00 2.82
2658 3304 2.365293 GTTTGACAAGTCCAAGCCCAAT 59.635 45.455 0.00 0.00 0.00 3.16
2659 3305 1.754226 GTTTGACAAGTCCAAGCCCAA 59.246 47.619 0.00 0.00 0.00 4.12
2660 3306 1.341482 TGTTTGACAAGTCCAAGCCCA 60.341 47.619 0.00 0.00 0.00 5.36
2661 3307 1.398692 TGTTTGACAAGTCCAAGCCC 58.601 50.000 0.00 0.00 0.00 5.19
2662 3308 2.165437 TGTTGTTTGACAAGTCCAAGCC 59.835 45.455 0.00 0.00 39.00 4.35
2663 3309 3.502191 TGTTGTTTGACAAGTCCAAGC 57.498 42.857 0.00 0.00 39.00 4.01
2664 3310 4.082245 AGGTTGTTGTTTGACAAGTCCAAG 60.082 41.667 0.00 0.00 39.00 3.61
2665 3311 3.829601 AGGTTGTTGTTTGACAAGTCCAA 59.170 39.130 0.00 0.00 39.00 3.53
2666 3312 3.192422 CAGGTTGTTGTTTGACAAGTCCA 59.808 43.478 0.00 0.00 39.00 4.02
2667 3313 3.442273 TCAGGTTGTTGTTTGACAAGTCC 59.558 43.478 0.00 0.00 39.00 3.85
2668 3314 4.156008 AGTCAGGTTGTTGTTTGACAAGTC 59.844 41.667 6.29 0.00 39.00 3.01
2669 3315 4.079253 AGTCAGGTTGTTGTTTGACAAGT 58.921 39.130 6.29 0.00 39.00 3.16
2670 3316 4.414852 CAGTCAGGTTGTTGTTTGACAAG 58.585 43.478 6.29 0.00 39.00 3.16
2671 3317 3.192422 CCAGTCAGGTTGTTGTTTGACAA 59.808 43.478 6.29 0.00 41.74 3.18
2672 3318 2.752354 CCAGTCAGGTTGTTGTTTGACA 59.248 45.455 6.29 0.00 41.74 3.58
2673 3319 2.099098 CCCAGTCAGGTTGTTGTTTGAC 59.901 50.000 0.00 0.00 40.08 3.18
2674 3320 2.374184 CCCAGTCAGGTTGTTGTTTGA 58.626 47.619 0.00 0.00 34.66 2.69
2675 3321 1.202405 GCCCAGTCAGGTTGTTGTTTG 60.202 52.381 0.00 0.00 34.66 2.93
2676 3322 1.111277 GCCCAGTCAGGTTGTTGTTT 58.889 50.000 0.00 0.00 34.66 2.83
2677 3323 0.755327 GGCCCAGTCAGGTTGTTGTT 60.755 55.000 0.00 0.00 34.66 2.83
2678 3324 1.152756 GGCCCAGTCAGGTTGTTGT 60.153 57.895 0.00 0.00 34.66 3.32
2679 3325 0.754957 TTGGCCCAGTCAGGTTGTTG 60.755 55.000 0.00 0.00 34.66 3.33
2680 3326 0.188342 ATTGGCCCAGTCAGGTTGTT 59.812 50.000 0.00 0.00 34.66 2.83
2681 3327 1.072266 TATTGGCCCAGTCAGGTTGT 58.928 50.000 0.00 0.00 34.66 3.32
2682 3328 1.463674 GTATTGGCCCAGTCAGGTTG 58.536 55.000 0.00 0.00 34.66 3.77
2683 3329 0.331616 GGTATTGGCCCAGTCAGGTT 59.668 55.000 0.00 0.00 34.66 3.50
2684 3330 0.844661 TGGTATTGGCCCAGTCAGGT 60.845 55.000 0.00 0.00 34.66 4.00
2685 3331 0.552848 ATGGTATTGGCCCAGTCAGG 59.447 55.000 0.00 0.00 34.92 3.86
2686 3332 1.683943 CATGGTATTGGCCCAGTCAG 58.316 55.000 0.00 0.00 34.92 3.51
2687 3333 0.258484 CCATGGTATTGGCCCAGTCA 59.742 55.000 2.57 0.00 34.92 3.41
2688 3334 0.468029 CCCATGGTATTGGCCCAGTC 60.468 60.000 11.73 0.00 34.92 3.51
2689 3335 0.923729 TCCCATGGTATTGGCCCAGT 60.924 55.000 11.73 0.00 34.92 4.00
2690 3336 0.261402 TTCCCATGGTATTGGCCCAG 59.739 55.000 11.73 0.00 34.92 4.45
2691 3337 0.261402 CTTCCCATGGTATTGGCCCA 59.739 55.000 11.73 0.00 35.29 5.36
2692 3338 0.261696 ACTTCCCATGGTATTGGCCC 59.738 55.000 11.73 0.00 35.29 5.80
2693 3339 2.159179 AACTTCCCATGGTATTGGCC 57.841 50.000 11.73 0.00 35.29 5.36
2694 3340 3.898482 ACTAACTTCCCATGGTATTGGC 58.102 45.455 11.73 0.00 35.29 4.52
2695 3341 5.826208 GGTTACTAACTTCCCATGGTATTGG 59.174 44.000 11.73 3.89 36.46 3.16
2696 3342 6.542370 CAGGTTACTAACTTCCCATGGTATTG 59.458 42.308 11.73 0.33 0.00 1.90
2697 3343 6.445786 TCAGGTTACTAACTTCCCATGGTATT 59.554 38.462 11.73 1.73 0.00 1.89
2698 3344 5.968167 TCAGGTTACTAACTTCCCATGGTAT 59.032 40.000 11.73 0.00 0.00 2.73
2699 3345 5.343715 TCAGGTTACTAACTTCCCATGGTA 58.656 41.667 11.73 0.00 0.00 3.25
2841 3487 4.396166 AGTTTGCTGAAATACTCGGGAATG 59.604 41.667 0.00 0.00 40.15 2.67
3020 3666 3.244735 TGTGTTGCCTTGCAGGAATACTA 60.245 43.478 0.00 0.00 40.61 1.82
3754 4556 4.633565 GCCAATACTTGAAGAGAGGAACTG 59.366 45.833 0.00 0.00 41.55 3.16
4084 4892 2.437085 TAACCTCAGCGATCCTCTCA 57.563 50.000 0.00 0.00 0.00 3.27
4403 5243 4.021719 TGTTCTACAAGTGGTACAGCTACC 60.022 45.833 0.00 0.00 41.80 3.18
4591 5783 7.231317 ACATCTCAAAAATCACACCTATGTTGT 59.769 33.333 0.00 0.00 36.72 3.32
4620 5812 9.862371 ACACTTGTCTCAGAAATATGTAACTAG 57.138 33.333 0.00 0.00 0.00 2.57
4667 5948 3.879295 AGTATTTGACATTCATGGCTCCG 59.121 43.478 0.00 0.00 36.54 4.63
4697 5978 9.346725 CTAAATTATCCAGTTTGAAAGTTGAGC 57.653 33.333 0.00 0.00 0.00 4.26
4712 5993 5.163131 GCCAGGTTAGGGTCTAAATTATCCA 60.163 44.000 0.00 0.00 0.00 3.41
4724 6006 0.038310 GCTTTGAGCCAGGTTAGGGT 59.962 55.000 0.00 0.00 43.27 4.34
4744 6026 0.876777 AACGCGTCGTCCATCAAACA 60.877 50.000 14.44 0.00 39.99 2.83
4844 6129 5.073965 ACCCCCACTACTTCATTGTTTTCTA 59.926 40.000 0.00 0.00 0.00 2.10
4858 7124 5.857471 ACTTTTTGTTTAACCCCCACTAC 57.143 39.130 0.00 0.00 0.00 2.73
4996 7266 6.713762 ACATGTCCAGAACTTCAAAAATCA 57.286 33.333 0.00 0.00 0.00 2.57
5011 7281 4.026744 TGGGAACTTCAAAAACATGTCCA 58.973 39.130 0.00 0.00 0.00 4.02
5039 7309 8.795842 TTTTCTCTGTGGTTTTCTTACAACTA 57.204 30.769 0.00 0.00 0.00 2.24
5042 7312 8.287439 TCATTTTCTCTGTGGTTTTCTTACAA 57.713 30.769 0.00 0.00 0.00 2.41
5043 7313 7.013274 CCTCATTTTCTCTGTGGTTTTCTTACA 59.987 37.037 0.00 0.00 0.00 2.41
5044 7314 7.228706 TCCTCATTTTCTCTGTGGTTTTCTTAC 59.771 37.037 0.00 0.00 0.00 2.34
5046 7316 6.129179 TCCTCATTTTCTCTGTGGTTTTCTT 58.871 36.000 0.00 0.00 0.00 2.52
5048 7318 6.391227 TTCCTCATTTTCTCTGTGGTTTTC 57.609 37.500 0.00 0.00 0.00 2.29
5050 7320 6.983906 ATTTCCTCATTTTCTCTGTGGTTT 57.016 33.333 0.00 0.00 0.00 3.27
5053 7327 7.870509 TGATATTTCCTCATTTTCTCTGTGG 57.129 36.000 0.00 0.00 0.00 4.17
5163 7454 7.753309 ATACAGGATGCACTCTACTAGTTAG 57.247 40.000 0.00 1.75 42.53 2.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.