Multiple sequence alignment - TraesCS2D01G066200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G066200 chr2D 100.000 5270 0 0 1 5270 27936495 27931226 0.000000e+00 9732
1 TraesCS2D01G066200 chr2D 88.107 3439 364 24 887 4294 27995592 27992168 0.000000e+00 4043
2 TraesCS2D01G066200 chr2D 87.051 3483 387 40 865 4301 27982319 27978855 0.000000e+00 3875
3 TraesCS2D01G066200 chr2D 88.841 1631 140 19 2699 4301 27965863 27964247 0.000000e+00 1965
4 TraesCS2D01G066200 chr2D 86.131 411 53 3 3877 4284 27950399 27949990 1.740000e-119 440
5 TraesCS2D01G066200 chr2D 85.507 276 26 8 4 267 27989989 27989716 5.200000e-70 276
6 TraesCS2D01G066200 chr2A 86.465 3709 440 29 631 4300 30171174 30167489 0.000000e+00 4012
7 TraesCS2D01G066200 chr2A 85.664 3711 448 48 641 4284 30179438 30175745 0.000000e+00 3829
8 TraesCS2D01G066200 chr2A 88.475 2230 247 9 1380 3604 30157782 30155558 0.000000e+00 2686
9 TraesCS2D01G066200 chr2A 94.595 962 33 7 3655 4602 30155369 30154413 0.000000e+00 1471
10 TraesCS2D01G066200 chr2A 88.540 637 43 21 4649 5270 30154264 30153643 0.000000e+00 745
11 TraesCS2D01G066200 chr2A 91.036 357 30 2 271 625 30159499 30159143 1.030000e-131 481
12 TraesCS2D01G066200 chr2B 88.007 3227 348 27 641 3843 45549654 45552865 0.000000e+00 3779
13 TraesCS2D01G066200 chr2B 85.993 3534 415 40 815 4294 45672379 45675886 0.000000e+00 3711
14 TraesCS2D01G066200 chr2B 86.799 3083 365 25 815 3873 44746112 44743048 0.000000e+00 3400
15 TraesCS2D01G066200 chr2B 88.603 2062 221 11 860 2917 44435265 44433214 0.000000e+00 2494
16 TraesCS2D01G066200 chr2B 86.797 1992 232 16 2327 4301 45679788 45681765 0.000000e+00 2193
17 TraesCS2D01G066200 chr2B 87.105 411 52 1 3884 4294 45552931 45553340 1.030000e-126 464
18 TraesCS2D01G066200 chr2B 83.461 393 61 3 3879 4271 44432821 44432433 3.880000e-96 363
19 TraesCS2D01G066200 chr2B 87.861 173 14 7 5 172 45678012 45678182 4.160000e-46 196


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G066200 chr2D 27931226 27936495 5269 True 9732.000000 9732 100.000000 1 5270 1 chr2D.!!$R1 5269
1 TraesCS2D01G066200 chr2D 27978855 27982319 3464 True 3875.000000 3875 87.051000 865 4301 1 chr2D.!!$R4 3436
2 TraesCS2D01G066200 chr2D 27989716 27995592 5876 True 2159.500000 4043 86.807000 4 4294 2 chr2D.!!$R5 4290
3 TraesCS2D01G066200 chr2D 27964247 27965863 1616 True 1965.000000 1965 88.841000 2699 4301 1 chr2D.!!$R3 1602
4 TraesCS2D01G066200 chr2A 30167489 30171174 3685 True 4012.000000 4012 86.465000 631 4300 1 chr2A.!!$R1 3669
5 TraesCS2D01G066200 chr2A 30175745 30179438 3693 True 3829.000000 3829 85.664000 641 4284 1 chr2A.!!$R2 3643
6 TraesCS2D01G066200 chr2A 30153643 30159499 5856 True 1345.750000 2686 90.661500 271 5270 4 chr2A.!!$R3 4999
7 TraesCS2D01G066200 chr2B 44743048 44746112 3064 True 3400.000000 3400 86.799000 815 3873 1 chr2B.!!$R1 3058
8 TraesCS2D01G066200 chr2B 45549654 45553340 3686 False 2121.500000 3779 87.556000 641 4294 2 chr2B.!!$F1 3653
9 TraesCS2D01G066200 chr2B 45672379 45681765 9386 False 2033.333333 3711 86.883667 5 4301 3 chr2B.!!$F2 4296
10 TraesCS2D01G066200 chr2B 44432433 44435265 2832 True 1428.500000 2494 86.032000 860 4271 2 chr2B.!!$R2 3411

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.031314 CAGCGCTACATCCTCGACAT 59.969 55.0 10.99 0.0 0.00 3.06 F
40 41 0.031314 CGCTACATCCTCGACATGCT 59.969 55.0 0.00 0.0 0.00 3.79 F
508 510 0.033504 GACAGACCAAGTCTTCCGCA 59.966 55.0 0.00 0.0 41.37 5.69 F
519 521 0.107066 TCTTCCGCATCATGGCATGT 60.107 50.0 25.62 11.5 0.00 3.21 F
1911 2564 0.107831 TCCCAGCCACACTGTACAAC 59.892 55.0 0.00 0.0 45.68 3.32 F
2383 3036 0.108472 CCTCGCTCTGCTTGACATGA 60.108 55.0 0.00 0.0 0.00 3.07 F
3621 10172 0.530870 GCTTGGGTCAGAGGATACGC 60.531 60.0 0.00 0.0 46.39 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1260 1340 0.462375 CGACACGGATTGGGATGGTA 59.538 55.000 0.00 0.0 0.00 3.25 R
1911 2564 1.366679 AGAGCGCAAGTGATGACATG 58.633 50.000 11.47 0.0 41.68 3.21 R
2383 3036 0.252479 CCTGAGAGCATGTTCTGGCT 59.748 55.000 17.57 0.0 44.48 4.75 R
2416 3069 2.099756 AGTTGCTCAAGTTCCAAACTGC 59.900 45.455 0.00 0.0 41.91 4.40 R
3613 10164 0.178767 TCAGCAGCAATGCGTATCCT 59.821 50.000 0.00 0.0 40.27 3.24 R
3787 10476 0.550914 ACACCAACCAAGCCTTCTGA 59.449 50.000 0.00 0.0 0.00 3.27 R
5111 13182 0.037046 CCAATTCCTTGCTTGTGGGC 60.037 55.000 0.00 0.0 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.452491 ACCTCCAAGCCCCAACCT 60.452 61.111 0.00 0.00 0.00 3.50
18 19 2.356667 CCTCCAAGCCCCAACCTC 59.643 66.667 0.00 0.00 0.00 3.85
19 20 2.538141 CCTCCAAGCCCCAACCTCA 61.538 63.158 0.00 0.00 0.00 3.86
20 21 1.001641 CTCCAAGCCCCAACCTCAG 60.002 63.158 0.00 0.00 0.00 3.35
21 22 2.677875 CCAAGCCCCAACCTCAGC 60.678 66.667 0.00 0.00 0.00 4.26
22 23 3.058160 CAAGCCCCAACCTCAGCG 61.058 66.667 0.00 0.00 0.00 5.18
25 26 4.096003 GCCCCAACCTCAGCGCTA 62.096 66.667 10.99 0.00 0.00 4.26
26 27 2.125106 CCCCAACCTCAGCGCTAC 60.125 66.667 10.99 0.00 0.00 3.58
27 28 2.662596 CCCAACCTCAGCGCTACA 59.337 61.111 10.99 0.00 0.00 2.74
28 29 1.221840 CCCAACCTCAGCGCTACAT 59.778 57.895 10.99 0.00 0.00 2.29
29 30 0.811616 CCCAACCTCAGCGCTACATC 60.812 60.000 10.99 0.00 0.00 3.06
30 31 0.811616 CCAACCTCAGCGCTACATCC 60.812 60.000 10.99 0.00 0.00 3.51
31 32 0.176680 CAACCTCAGCGCTACATCCT 59.823 55.000 10.99 0.00 0.00 3.24
32 33 0.461961 AACCTCAGCGCTACATCCTC 59.538 55.000 10.99 0.00 0.00 3.71
33 34 1.007964 CCTCAGCGCTACATCCTCG 60.008 63.158 10.99 0.00 0.00 4.63
34 35 1.448119 CCTCAGCGCTACATCCTCGA 61.448 60.000 10.99 0.00 0.00 4.04
35 36 0.317436 CTCAGCGCTACATCCTCGAC 60.317 60.000 10.99 0.00 0.00 4.20
36 37 1.029947 TCAGCGCTACATCCTCGACA 61.030 55.000 10.99 0.00 0.00 4.35
37 38 0.031314 CAGCGCTACATCCTCGACAT 59.969 55.000 10.99 0.00 0.00 3.06
38 39 0.031314 AGCGCTACATCCTCGACATG 59.969 55.000 8.99 0.00 0.00 3.21
39 40 1.552348 GCGCTACATCCTCGACATGC 61.552 60.000 0.00 0.00 0.00 4.06
40 41 0.031314 CGCTACATCCTCGACATGCT 59.969 55.000 0.00 0.00 0.00 3.79
41 42 1.777101 GCTACATCCTCGACATGCTC 58.223 55.000 0.00 0.00 0.00 4.26
42 43 1.604185 GCTACATCCTCGACATGCTCC 60.604 57.143 0.00 0.00 0.00 4.70
43 44 1.000283 CTACATCCTCGACATGCTCCC 60.000 57.143 0.00 0.00 0.00 4.30
44 45 1.300465 CATCCTCGACATGCTCCCG 60.300 63.158 0.00 0.00 0.00 5.14
45 46 1.758514 ATCCTCGACATGCTCCCGT 60.759 57.895 0.00 0.00 0.00 5.28
46 47 2.021068 ATCCTCGACATGCTCCCGTG 62.021 60.000 0.00 0.00 0.00 4.94
47 48 2.887568 CTCGACATGCTCCCGTGC 60.888 66.667 0.00 0.00 0.00 5.34
48 49 4.451150 TCGACATGCTCCCGTGCC 62.451 66.667 0.00 0.00 0.00 5.01
50 51 4.101448 GACATGCTCCCGTGCCCT 62.101 66.667 0.00 0.00 0.00 5.19
51 52 2.687200 ACATGCTCCCGTGCCCTA 60.687 61.111 0.00 0.00 0.00 3.53
52 53 2.109799 CATGCTCCCGTGCCCTAG 59.890 66.667 0.00 0.00 0.00 3.02
53 54 3.866582 ATGCTCCCGTGCCCTAGC 61.867 66.667 0.00 0.00 40.48 3.42
61 62 2.366435 GTGCCCTAGCCCCAGGTA 60.366 66.667 0.00 0.00 38.69 3.08
62 63 2.366435 TGCCCTAGCCCCAGGTAC 60.366 66.667 0.00 0.00 38.69 3.34
63 64 2.366435 GCCCTAGCCCCAGGTACA 60.366 66.667 0.00 0.00 33.44 2.90
64 65 1.999002 GCCCTAGCCCCAGGTACAA 60.999 63.158 0.00 0.00 33.44 2.41
65 66 1.353394 GCCCTAGCCCCAGGTACAAT 61.353 60.000 0.00 0.00 33.44 2.71
66 67 1.222567 CCCTAGCCCCAGGTACAATT 58.777 55.000 0.00 0.00 33.44 2.32
67 68 1.569072 CCCTAGCCCCAGGTACAATTT 59.431 52.381 0.00 0.00 33.44 1.82
68 69 2.654863 CCTAGCCCCAGGTACAATTTG 58.345 52.381 0.00 0.00 0.00 2.32
69 70 2.025321 CCTAGCCCCAGGTACAATTTGT 60.025 50.000 7.30 7.30 0.00 2.83
70 71 1.923356 AGCCCCAGGTACAATTTGTG 58.077 50.000 12.30 0.00 0.00 3.33
71 72 0.246360 GCCCCAGGTACAATTTGTGC 59.754 55.000 12.30 10.54 31.96 4.57
72 73 1.923356 CCCCAGGTACAATTTGTGCT 58.077 50.000 15.73 1.70 33.35 4.40
73 74 1.818674 CCCCAGGTACAATTTGTGCTC 59.181 52.381 15.73 7.53 33.35 4.26
74 75 1.818674 CCCAGGTACAATTTGTGCTCC 59.181 52.381 15.73 12.70 33.35 4.70
75 76 1.468520 CCAGGTACAATTTGTGCTCCG 59.531 52.381 15.73 6.17 33.35 4.63
76 77 2.422597 CAGGTACAATTTGTGCTCCGA 58.577 47.619 15.73 0.00 33.35 4.55
77 78 2.159627 CAGGTACAATTTGTGCTCCGAC 59.840 50.000 15.73 3.90 33.35 4.79
78 79 2.038557 AGGTACAATTTGTGCTCCGACT 59.961 45.455 15.73 3.23 33.35 4.18
79 80 2.812011 GGTACAATTTGTGCTCCGACTT 59.188 45.455 15.73 0.00 33.35 3.01
80 81 3.252458 GGTACAATTTGTGCTCCGACTTT 59.748 43.478 15.73 0.00 33.35 2.66
81 82 4.261447 GGTACAATTTGTGCTCCGACTTTT 60.261 41.667 15.73 0.00 33.35 2.27
82 83 3.964909 ACAATTTGTGCTCCGACTTTTC 58.035 40.909 0.15 0.00 0.00 2.29
83 84 3.243401 ACAATTTGTGCTCCGACTTTTCC 60.243 43.478 0.15 0.00 0.00 3.13
84 85 2.341846 TTTGTGCTCCGACTTTTCCT 57.658 45.000 0.00 0.00 0.00 3.36
85 86 2.341846 TTGTGCTCCGACTTTTCCTT 57.658 45.000 0.00 0.00 0.00 3.36
86 87 1.593196 TGTGCTCCGACTTTTCCTTG 58.407 50.000 0.00 0.00 0.00 3.61
87 88 1.140052 TGTGCTCCGACTTTTCCTTGA 59.860 47.619 0.00 0.00 0.00 3.02
88 89 2.218603 GTGCTCCGACTTTTCCTTGAA 58.781 47.619 0.00 0.00 0.00 2.69
89 90 2.031944 GTGCTCCGACTTTTCCTTGAAC 60.032 50.000 0.00 0.00 0.00 3.18
90 91 2.218603 GCTCCGACTTTTCCTTGAACA 58.781 47.619 0.00 0.00 0.00 3.18
91 92 2.616842 GCTCCGACTTTTCCTTGAACAA 59.383 45.455 0.00 0.00 0.00 2.83
92 93 3.066203 GCTCCGACTTTTCCTTGAACAAA 59.934 43.478 0.00 0.00 0.00 2.83
93 94 4.439563 GCTCCGACTTTTCCTTGAACAAAA 60.440 41.667 0.00 0.00 0.00 2.44
94 95 5.736207 GCTCCGACTTTTCCTTGAACAAAAT 60.736 40.000 0.00 0.00 0.00 1.82
95 96 6.215495 TCCGACTTTTCCTTGAACAAAATT 57.785 33.333 0.00 0.00 0.00 1.82
96 97 7.336161 TCCGACTTTTCCTTGAACAAAATTA 57.664 32.000 0.00 0.00 0.00 1.40
97 98 7.197703 TCCGACTTTTCCTTGAACAAAATTAC 58.802 34.615 0.00 0.00 0.00 1.89
98 99 6.975772 CCGACTTTTCCTTGAACAAAATTACA 59.024 34.615 0.00 0.00 0.00 2.41
99 100 7.043656 CCGACTTTTCCTTGAACAAAATTACAC 60.044 37.037 0.00 0.00 0.00 2.90
100 101 7.700656 CGACTTTTCCTTGAACAAAATTACACT 59.299 33.333 0.00 0.00 0.00 3.55
101 102 9.366216 GACTTTTCCTTGAACAAAATTACACTT 57.634 29.630 0.00 0.00 0.00 3.16
102 103 9.719355 ACTTTTCCTTGAACAAAATTACACTTT 57.281 25.926 0.00 0.00 0.00 2.66
103 104 9.971744 CTTTTCCTTGAACAAAATTACACTTTG 57.028 29.630 0.00 0.00 39.26 2.77
104 105 9.495572 TTTTCCTTGAACAAAATTACACTTTGT 57.504 25.926 0.00 0.00 46.37 2.83
105 106 8.472683 TTCCTTGAACAAAATTACACTTTGTG 57.527 30.769 1.98 0.00 44.25 3.33
107 108 8.740906 TCCTTGAACAAAATTACACTTTGTGTA 58.259 29.630 6.48 6.48 45.56 2.90
115 116 2.080286 ACACTTTGTGTAGCGCTAGG 57.920 50.000 19.48 0.12 45.56 3.02
116 117 0.721718 CACTTTGTGTAGCGCTAGGC 59.278 55.000 19.48 13.97 44.05 3.93
117 118 0.391263 ACTTTGTGTAGCGCTAGGCC 60.391 55.000 19.48 7.01 45.17 5.19
118 119 0.108138 CTTTGTGTAGCGCTAGGCCT 60.108 55.000 19.48 11.78 45.17 5.19
119 120 0.323629 TTTGTGTAGCGCTAGGCCTT 59.676 50.000 19.48 0.00 45.17 4.35
120 121 1.187974 TTGTGTAGCGCTAGGCCTTA 58.812 50.000 19.48 0.00 45.17 2.69
121 122 1.187974 TGTGTAGCGCTAGGCCTTAA 58.812 50.000 19.48 0.00 45.17 1.85
122 123 1.760613 TGTGTAGCGCTAGGCCTTAAT 59.239 47.619 19.48 0.00 45.17 1.40
123 124 2.169769 TGTGTAGCGCTAGGCCTTAATT 59.830 45.455 19.48 0.00 45.17 1.40
124 125 2.801111 GTGTAGCGCTAGGCCTTAATTC 59.199 50.000 19.48 2.16 45.17 2.17
125 126 2.432874 TGTAGCGCTAGGCCTTAATTCA 59.567 45.455 19.48 5.10 45.17 2.57
126 127 1.954927 AGCGCTAGGCCTTAATTCAC 58.045 50.000 12.58 0.00 45.17 3.18
127 128 0.945099 GCGCTAGGCCTTAATTCACC 59.055 55.000 12.58 0.00 34.80 4.02
128 129 1.594331 CGCTAGGCCTTAATTCACCC 58.406 55.000 12.58 0.00 0.00 4.61
129 130 1.134220 CGCTAGGCCTTAATTCACCCA 60.134 52.381 12.58 0.00 0.00 4.51
130 131 2.487265 CGCTAGGCCTTAATTCACCCAT 60.487 50.000 12.58 0.00 0.00 4.00
131 132 3.149981 GCTAGGCCTTAATTCACCCATC 58.850 50.000 12.58 0.00 0.00 3.51
132 133 3.181439 GCTAGGCCTTAATTCACCCATCT 60.181 47.826 12.58 0.00 0.00 2.90
133 134 4.041691 GCTAGGCCTTAATTCACCCATCTA 59.958 45.833 12.58 0.00 0.00 1.98
134 135 5.280727 GCTAGGCCTTAATTCACCCATCTAT 60.281 44.000 12.58 0.00 0.00 1.98
135 136 5.669798 AGGCCTTAATTCACCCATCTATT 57.330 39.130 0.00 0.00 0.00 1.73
136 137 6.030727 AGGCCTTAATTCACCCATCTATTT 57.969 37.500 0.00 0.00 0.00 1.40
137 138 7.161715 AGGCCTTAATTCACCCATCTATTTA 57.838 36.000 0.00 0.00 0.00 1.40
138 139 7.234355 AGGCCTTAATTCACCCATCTATTTAG 58.766 38.462 0.00 0.00 0.00 1.85
139 140 7.073725 AGGCCTTAATTCACCCATCTATTTAGA 59.926 37.037 0.00 0.00 36.65 2.10
140 141 7.890655 GGCCTTAATTCACCCATCTATTTAGAT 59.109 37.037 0.00 0.00 43.51 1.98
141 142 9.959721 GCCTTAATTCACCCATCTATTTAGATA 57.040 33.333 0.00 0.00 40.91 1.98
146 147 6.935240 TCACCCATCTATTTAGATACCAGG 57.065 41.667 0.00 2.82 40.91 4.45
147 148 6.390504 TCACCCATCTATTTAGATACCAGGT 58.609 40.000 0.00 0.00 40.91 4.00
148 149 6.497259 TCACCCATCTATTTAGATACCAGGTC 59.503 42.308 0.00 0.00 40.91 3.85
149 150 5.480772 ACCCATCTATTTAGATACCAGGTCG 59.519 44.000 0.00 0.00 40.91 4.79
150 151 5.480772 CCCATCTATTTAGATACCAGGTCGT 59.519 44.000 0.00 0.00 40.91 4.34
151 152 6.390721 CCATCTATTTAGATACCAGGTCGTG 58.609 44.000 0.00 0.00 40.91 4.35
152 153 6.208797 CCATCTATTTAGATACCAGGTCGTGA 59.791 42.308 0.00 0.00 40.91 4.35
153 154 7.093727 CCATCTATTTAGATACCAGGTCGTGAT 60.094 40.741 0.00 0.00 40.91 3.06
154 155 7.834881 TCTATTTAGATACCAGGTCGTGATT 57.165 36.000 0.00 0.00 0.00 2.57
155 156 8.246430 TCTATTTAGATACCAGGTCGTGATTT 57.754 34.615 0.00 0.00 0.00 2.17
156 157 8.141909 TCTATTTAGATACCAGGTCGTGATTTG 58.858 37.037 0.00 0.00 0.00 2.32
157 158 3.543680 AGATACCAGGTCGTGATTTGG 57.456 47.619 0.00 2.25 36.76 3.28
158 159 2.838202 AGATACCAGGTCGTGATTTGGT 59.162 45.455 0.00 11.40 45.42 3.67
159 160 3.263425 AGATACCAGGTCGTGATTTGGTT 59.737 43.478 0.00 3.36 40.94 3.67
160 161 2.358322 ACCAGGTCGTGATTTGGTTT 57.642 45.000 0.00 0.00 40.94 3.27
161 162 1.953686 ACCAGGTCGTGATTTGGTTTG 59.046 47.619 0.00 0.00 40.94 2.93
162 163 2.226330 CCAGGTCGTGATTTGGTTTGA 58.774 47.619 0.00 0.00 0.00 2.69
163 164 2.819608 CCAGGTCGTGATTTGGTTTGAT 59.180 45.455 0.00 0.00 0.00 2.57
164 165 3.255642 CCAGGTCGTGATTTGGTTTGATT 59.744 43.478 0.00 0.00 0.00 2.57
165 166 4.229096 CAGGTCGTGATTTGGTTTGATTG 58.771 43.478 0.00 0.00 0.00 2.67
166 167 3.255642 AGGTCGTGATTTGGTTTGATTGG 59.744 43.478 0.00 0.00 0.00 3.16
167 168 3.254657 GGTCGTGATTTGGTTTGATTGGA 59.745 43.478 0.00 0.00 0.00 3.53
168 169 4.226761 GTCGTGATTTGGTTTGATTGGAC 58.773 43.478 0.00 0.00 0.00 4.02
169 170 3.058570 TCGTGATTTGGTTTGATTGGACG 60.059 43.478 0.00 0.00 0.00 4.79
170 171 2.986479 GTGATTTGGTTTGATTGGACGC 59.014 45.455 0.00 0.00 0.00 5.19
171 172 2.625314 TGATTTGGTTTGATTGGACGCA 59.375 40.909 0.00 0.00 0.00 5.24
172 173 3.257873 TGATTTGGTTTGATTGGACGCAT 59.742 39.130 0.00 0.00 0.00 4.73
173 174 4.460731 TGATTTGGTTTGATTGGACGCATA 59.539 37.500 0.00 0.00 0.00 3.14
174 175 4.855715 TTTGGTTTGATTGGACGCATAA 57.144 36.364 0.00 0.00 0.00 1.90
175 176 4.855715 TTGGTTTGATTGGACGCATAAA 57.144 36.364 0.00 0.00 0.00 1.40
176 177 5.398603 TTGGTTTGATTGGACGCATAAAT 57.601 34.783 0.00 0.00 0.00 1.40
177 178 5.398603 TGGTTTGATTGGACGCATAAATT 57.601 34.783 0.00 0.00 0.00 1.82
178 179 6.516739 TGGTTTGATTGGACGCATAAATTA 57.483 33.333 0.00 0.00 0.00 1.40
179 180 7.106439 TGGTTTGATTGGACGCATAAATTAT 57.894 32.000 0.00 0.00 0.00 1.28
180 181 7.551585 TGGTTTGATTGGACGCATAAATTATT 58.448 30.769 0.00 0.00 0.00 1.40
181 182 7.704472 TGGTTTGATTGGACGCATAAATTATTC 59.296 33.333 0.00 0.00 0.00 1.75
182 183 7.096640 GGTTTGATTGGACGCATAAATTATTCG 60.097 37.037 3.67 3.67 0.00 3.34
183 184 6.612247 TGATTGGACGCATAAATTATTCGT 57.388 33.333 10.16 10.16 40.53 3.85
184 185 7.022055 TGATTGGACGCATAAATTATTCGTT 57.978 32.000 11.48 0.00 38.11 3.85
185 186 6.909895 TGATTGGACGCATAAATTATTCGTTG 59.090 34.615 11.48 0.00 38.11 4.10
186 187 5.163302 TGGACGCATAAATTATTCGTTGG 57.837 39.130 11.48 0.00 38.11 3.77
187 188 4.876679 TGGACGCATAAATTATTCGTTGGA 59.123 37.500 11.48 0.00 38.11 3.53
188 189 5.007234 TGGACGCATAAATTATTCGTTGGAG 59.993 40.000 11.48 0.00 38.11 3.86
189 190 5.418310 ACGCATAAATTATTCGTTGGAGG 57.582 39.130 4.95 0.00 34.53 4.30
190 191 4.219033 CGCATAAATTATTCGTTGGAGGC 58.781 43.478 0.00 0.00 0.00 4.70
191 192 4.219033 GCATAAATTATTCGTTGGAGGCG 58.781 43.478 0.00 0.00 0.00 5.52
192 193 4.261031 GCATAAATTATTCGTTGGAGGCGT 60.261 41.667 0.00 0.00 0.00 5.68
193 194 5.732247 GCATAAATTATTCGTTGGAGGCGTT 60.732 40.000 0.00 0.00 0.00 4.84
194 195 3.757745 AATTATTCGTTGGAGGCGTTG 57.242 42.857 0.00 0.00 0.00 4.10
195 196 2.459060 TTATTCGTTGGAGGCGTTGA 57.541 45.000 0.00 0.00 0.00 3.18
196 197 2.459060 TATTCGTTGGAGGCGTTGAA 57.541 45.000 0.00 0.00 0.00 2.69
197 198 1.156736 ATTCGTTGGAGGCGTTGAAG 58.843 50.000 0.00 0.00 0.00 3.02
198 199 0.882927 TTCGTTGGAGGCGTTGAAGG 60.883 55.000 0.00 0.00 0.00 3.46
199 200 2.325082 CGTTGGAGGCGTTGAAGGG 61.325 63.158 0.00 0.00 0.00 3.95
200 201 1.971695 GTTGGAGGCGTTGAAGGGG 60.972 63.158 0.00 0.00 0.00 4.79
201 202 3.204467 TTGGAGGCGTTGAAGGGGG 62.204 63.158 0.00 0.00 0.00 5.40
220 221 3.787001 GTGGGGAGCGGGAGGAAG 61.787 72.222 0.00 0.00 0.00 3.46
224 225 4.168291 GGAGCGGGAGGAAGGCAG 62.168 72.222 0.00 0.00 0.00 4.85
225 226 4.847444 GAGCGGGAGGAAGGCAGC 62.847 72.222 0.00 0.00 0.00 5.25
228 229 3.710722 CGGGAGGAAGGCAGCAGT 61.711 66.667 0.00 0.00 0.00 4.40
229 230 2.270527 GGGAGGAAGGCAGCAGTC 59.729 66.667 0.00 0.00 0.00 3.51
230 231 2.596851 GGGAGGAAGGCAGCAGTCA 61.597 63.158 0.00 0.00 0.00 3.41
231 232 1.606531 GGAGGAAGGCAGCAGTCAT 59.393 57.895 0.00 0.00 0.00 3.06
232 233 0.034670 GGAGGAAGGCAGCAGTCATT 60.035 55.000 0.00 0.00 0.00 2.57
233 234 1.615384 GGAGGAAGGCAGCAGTCATTT 60.615 52.381 0.00 0.00 0.00 2.32
234 235 1.471684 GAGGAAGGCAGCAGTCATTTG 59.528 52.381 0.00 0.00 0.00 2.32
235 236 0.108945 GGAAGGCAGCAGTCATTTGC 60.109 55.000 0.00 0.00 44.41 3.68
242 243 4.637483 GCAGCAGTCATTTGCCTAATAA 57.363 40.909 0.00 0.00 45.18 1.40
243 244 4.354587 GCAGCAGTCATTTGCCTAATAAC 58.645 43.478 0.00 0.00 45.18 1.89
244 245 4.096984 GCAGCAGTCATTTGCCTAATAACT 59.903 41.667 0.00 0.00 45.18 2.24
245 246 5.575957 CAGCAGTCATTTGCCTAATAACTG 58.424 41.667 7.32 7.32 45.18 3.16
246 247 5.124457 CAGCAGTCATTTGCCTAATAACTGT 59.876 40.000 11.50 0.47 45.18 3.55
247 248 6.316140 CAGCAGTCATTTGCCTAATAACTGTA 59.684 38.462 11.50 0.00 45.18 2.74
248 249 6.316390 AGCAGTCATTTGCCTAATAACTGTAC 59.684 38.462 11.50 0.00 45.18 2.90
249 250 6.316390 GCAGTCATTTGCCTAATAACTGTACT 59.684 38.462 11.50 0.00 38.13 2.73
250 251 7.677276 GCAGTCATTTGCCTAATAACTGTACTG 60.677 40.741 11.50 0.00 38.13 2.74
251 252 7.334421 CAGTCATTTGCCTAATAACTGTACTGT 59.666 37.037 0.00 0.00 0.00 3.55
252 253 8.537016 AGTCATTTGCCTAATAACTGTACTGTA 58.463 33.333 5.76 0.00 0.00 2.74
253 254 9.158233 GTCATTTGCCTAATAACTGTACTGTAA 57.842 33.333 5.76 0.00 0.00 2.41
254 255 9.378551 TCATTTGCCTAATAACTGTACTGTAAG 57.621 33.333 5.76 2.49 42.29 2.34
268 269 3.505449 CTGTAAGTGAAACACGACAGC 57.495 47.619 18.82 0.00 41.94 4.40
269 270 2.206750 TGTAAGTGAAACACGACAGCC 58.793 47.619 0.00 0.00 41.43 4.85
270 271 1.529865 GTAAGTGAAACACGACAGCCC 59.470 52.381 0.00 0.00 41.43 5.19
271 272 0.107410 AAGTGAAACACGACAGCCCA 60.107 50.000 0.00 0.00 41.43 5.36
272 273 0.532862 AGTGAAACACGACAGCCCAG 60.533 55.000 0.00 0.00 41.43 4.45
273 274 1.227823 TGAAACACGACAGCCCAGG 60.228 57.895 0.00 0.00 0.00 4.45
274 275 1.227853 GAAACACGACAGCCCAGGT 60.228 57.895 0.00 0.00 0.00 4.00
275 276 0.818040 GAAACACGACAGCCCAGGTT 60.818 55.000 0.00 0.00 0.00 3.50
276 277 0.818040 AAACACGACAGCCCAGGTTC 60.818 55.000 0.00 0.00 0.00 3.62
277 278 1.978455 AACACGACAGCCCAGGTTCA 61.978 55.000 0.00 0.00 0.00 3.18
278 279 1.961277 CACGACAGCCCAGGTTCAC 60.961 63.158 0.00 0.00 0.00 3.18
279 280 2.425592 CGACAGCCCAGGTTCACA 59.574 61.111 0.00 0.00 0.00 3.58
280 281 1.227823 CGACAGCCCAGGTTCACAA 60.228 57.895 0.00 0.00 0.00 3.33
281 282 0.817634 CGACAGCCCAGGTTCACAAA 60.818 55.000 0.00 0.00 0.00 2.83
290 291 3.564511 CCAGGTTCACAAATAAGCGTTG 58.435 45.455 0.00 0.00 0.00 4.10
297 298 3.126858 TCACAAATAAGCGTTGAGGATGC 59.873 43.478 0.00 0.00 40.73 3.91
320 321 0.902531 TCTTGGAGATTCGGTGGGAC 59.097 55.000 0.00 0.00 0.00 4.46
326 327 2.632996 GGAGATTCGGTGGGACATGATA 59.367 50.000 0.00 0.00 44.52 2.15
333 334 2.630098 CGGTGGGACATGATAGATGTCT 59.370 50.000 13.10 0.00 45.60 3.41
344 345 1.158484 TAGATGTCTCGTCGAGGGCG 61.158 60.000 21.63 0.00 39.35 6.13
350 351 0.105593 TCTCGTCGAGGGCGTATACT 59.894 55.000 21.63 0.00 38.98 2.12
361 362 0.592148 GCGTATACTGCCGCTACTCT 59.408 55.000 0.56 0.00 46.08 3.24
368 369 3.779271 ACTGCCGCTACTCTTTAGTAC 57.221 47.619 0.00 0.00 37.15 2.73
400 401 5.587388 ATGGATTCAATTTTGTCGAGCAT 57.413 34.783 0.00 0.00 0.00 3.79
402 403 4.458642 TGGATTCAATTTTGTCGAGCATCA 59.541 37.500 0.00 0.00 33.17 3.07
414 416 6.801539 TGTCGAGCATCACTTTTAAGATTT 57.198 33.333 0.00 0.00 33.17 2.17
458 460 1.068741 GTTCGATGACGGGGATAGCTT 59.931 52.381 0.00 0.00 40.21 3.74
472 474 7.013942 ACGGGGATAGCTTGTTAATTAATTTCC 59.986 37.037 5.91 3.83 0.00 3.13
480 482 4.749976 TGTTAATTAATTTCCCCGCAAGC 58.250 39.130 5.91 0.00 0.00 4.01
497 499 1.954146 GCGCGACAAAGACAGACCA 60.954 57.895 12.10 0.00 0.00 4.02
508 510 0.033504 GACAGACCAAGTCTTCCGCA 59.966 55.000 0.00 0.00 41.37 5.69
519 521 0.107066 TCTTCCGCATCATGGCATGT 60.107 50.000 25.62 11.50 0.00 3.21
570 572 3.058639 GCACTTTGCAGAGTCAACTAAGG 60.059 47.826 6.97 0.00 44.26 2.69
586 588 3.521937 ACTAAGGTGTGCTTGGGCTTATA 59.478 43.478 0.00 0.00 39.59 0.98
588 590 3.669939 AGGTGTGCTTGGGCTTATAAT 57.330 42.857 0.00 0.00 39.59 1.28
592 594 5.368523 AGGTGTGCTTGGGCTTATAATAGTA 59.631 40.000 0.00 0.00 39.59 1.82
606 608 9.570488 GCTTATAATAGTATACTTCCTGAACCG 57.430 37.037 11.40 0.00 0.00 4.44
625 627 3.502990 TACAGCCAACCGCGACGTT 62.503 57.895 8.23 0.00 44.76 3.99
626 628 2.139888 TACAGCCAACCGCGACGTTA 62.140 55.000 8.23 0.00 44.76 3.18
730 769 2.393271 TTTTGGGGTGCACAAGTTTG 57.607 45.000 20.43 0.00 0.00 2.93
910 964 3.817647 CCCTGAAGTCAAAGTCAAGAAGG 59.182 47.826 0.00 0.00 0.00 3.46
1258 1338 1.228367 CAAGGGGTCAACTGCAGCT 60.228 57.895 15.27 0.00 0.00 4.24
1260 1340 1.422161 AAGGGGTCAACTGCAGCTCT 61.422 55.000 15.27 0.00 0.00 4.09
1305 1385 3.270027 CATCCAATTCAGGTCTACGCAA 58.730 45.455 0.00 0.00 0.00 4.85
1438 2019 2.584498 AGCCTCCAATCCCTGAATCTTT 59.416 45.455 0.00 0.00 0.00 2.52
1472 2125 1.985159 TGCAGGTAACATCCCTCTGTT 59.015 47.619 0.00 0.00 41.95 3.16
1473 2126 2.290260 TGCAGGTAACATCCCTCTGTTG 60.290 50.000 0.00 0.00 39.60 3.33
1479 2132 4.224370 GGTAACATCCCTCTGTTGTTAGGA 59.776 45.833 0.00 0.00 38.93 2.94
1498 2151 2.549778 GGAGCATCTGCATCTCTTACCC 60.550 54.545 4.79 0.00 45.16 3.69
1513 2166 4.858850 TCTTACCCATGTCAATCTTGCAT 58.141 39.130 0.00 0.00 0.00 3.96
1514 2167 5.263599 TCTTACCCATGTCAATCTTGCATT 58.736 37.500 0.00 0.00 0.00 3.56
1519 2172 5.657745 ACCCATGTCAATCTTGCATTCAATA 59.342 36.000 0.00 0.00 0.00 1.90
1531 2184 8.985315 TCTTGCATTCAATATTCTTAGTGGAT 57.015 30.769 0.00 0.00 0.00 3.41
1582 2235 4.336713 CGTCACTCAGTGAGATAATCCTCA 59.663 45.833 26.86 0.00 43.57 3.86
1629 2282 3.751175 TCCCAGCTAATTTGTTCAACTCG 59.249 43.478 0.00 0.00 0.00 4.18
1642 2295 4.936411 TGTTCAACTCGTCCAAACTTGTTA 59.064 37.500 0.00 0.00 0.00 2.41
1666 2319 2.112898 GACCTCCGGTCGAATGCTA 58.887 57.895 0.00 0.00 43.14 3.49
1776 2429 5.482878 AGCATCTTTGGGAAATGTTTCATCT 59.517 36.000 7.69 0.00 38.92 2.90
1785 2438 6.168389 GGGAAATGTTTCATCTTTGCATTCT 58.832 36.000 7.69 0.00 38.92 2.40
1814 2467 4.024048 GCTAGCACAAAACAACTTAGCAGA 60.024 41.667 10.63 0.00 0.00 4.26
1911 2564 0.107831 TCCCAGCCACACTGTACAAC 59.892 55.000 0.00 0.00 45.68 3.32
1912 2565 0.179032 CCCAGCCACACTGTACAACA 60.179 55.000 0.00 0.00 45.68 3.33
1923 2576 5.237127 CACACTGTACAACATGTCATCACTT 59.763 40.000 0.00 0.00 0.00 3.16
1924 2577 5.237127 ACACTGTACAACATGTCATCACTTG 59.763 40.000 0.00 0.00 34.51 3.16
1926 2579 2.975410 ACAACATGTCATCACTTGCG 57.025 45.000 0.00 0.00 32.06 4.85
1934 2587 3.599343 TGTCATCACTTGCGCTCTTTAT 58.401 40.909 9.73 0.00 0.00 1.40
2070 2723 3.216800 TCTGAGCAACATGTCAAAGCTT 58.783 40.909 13.83 0.00 35.36 3.74
2073 2726 3.004002 TGAGCAACATGTCAAAGCTTCAG 59.996 43.478 13.83 0.00 35.36 3.02
2105 2758 5.670485 TCTTTCAAGTAACTTGCTGTCTGA 58.330 37.500 0.00 0.00 40.84 3.27
2115 2768 1.002868 GCTGTCTGATGTGGTGCCT 60.003 57.895 0.00 0.00 0.00 4.75
2207 2860 3.859443 CATTCCTTGTCTCTCTCACCAG 58.141 50.000 0.00 0.00 0.00 4.00
2214 2867 1.615883 GTCTCTCTCACCAGTTGCTCA 59.384 52.381 0.00 0.00 0.00 4.26
2216 2869 2.298446 TCTCTCTCACCAGTTGCTCAAG 59.702 50.000 0.00 0.00 0.00 3.02
2217 2870 1.155042 CTCTCACCAGTTGCTCAAGC 58.845 55.000 0.00 0.00 42.50 4.01
2314 2967 2.484264 CTGGAGCGGTTAAACTTTGGAG 59.516 50.000 0.00 0.00 0.00 3.86
2359 3012 2.435805 CCAGCTGAGATAGGCAACCTTA 59.564 50.000 17.39 0.00 34.61 2.69
2383 3036 0.108472 CCTCGCTCTGCTTGACATGA 60.108 55.000 0.00 0.00 0.00 3.07
2532 3185 4.847198 TCAGCCAGCTTTATCTTGATGAA 58.153 39.130 0.00 0.00 0.00 2.57
2587 3240 1.796459 GACAATGCAAAAGGCTGCTTG 59.204 47.619 0.00 5.45 45.15 4.01
2703 3356 1.762460 CCTGACAGGGCCGATACCT 60.762 63.158 14.26 0.00 39.43 3.08
2808 3461 3.668447 CCTGTGTGTTCAACTGCTATCT 58.332 45.455 0.00 0.00 0.00 1.98
2878 3531 1.404181 GCGCACTGAAGGTCATACAGA 60.404 52.381 0.30 0.00 35.85 3.41
2921 3574 5.891551 ACAATTTAACTGGTCAAGTTCCACT 59.108 36.000 0.00 0.00 46.60 4.00
2931 3584 4.546570 GTCAAGTTCCACTGTATTTTGGC 58.453 43.478 0.00 0.00 32.37 4.52
2947 3600 1.527034 TGGCAACTTCAGCAGCTTAG 58.473 50.000 0.00 0.00 37.61 2.18
3000 3653 2.966732 GCCAATCCCGACTGGTGGA 61.967 63.158 0.00 0.00 31.94 4.02
3031 3684 2.408271 TTCAGCTGCAGTATTCCTGG 57.592 50.000 16.64 0.00 41.81 4.45
3081 9620 1.690352 GCTGCCATATTTGGATTGCCT 59.310 47.619 6.35 0.00 46.92 4.75
3152 9703 1.941668 GCTGATAATAGCTCCACCGGC 60.942 57.143 0.00 0.00 40.52 6.13
3389 9940 4.016444 GCCATCAAGGTGTTCCATCTTAA 58.984 43.478 0.00 0.00 31.84 1.85
3420 9971 6.438763 AGGTTCAAGAAATAGCTTTTTCACG 58.561 36.000 25.27 17.44 37.93 4.35
3621 10172 0.530870 GCTTGGGTCAGAGGATACGC 60.531 60.000 0.00 0.00 46.39 4.42
3638 10189 1.012086 CGCATTGCTGCTGATGTAGT 58.988 50.000 7.12 0.00 46.65 2.73
3787 10476 4.624913 TCTCTCTTCAGGTATTGGTGGAT 58.375 43.478 0.00 0.00 0.00 3.41
3831 10520 3.770666 AGGAACGATCGGATATATTGCG 58.229 45.455 20.98 0.00 41.07 4.85
3908 10631 4.471386 AGTATTTATGTCCACTGCTCCTGT 59.529 41.667 0.00 0.00 0.00 4.00
4054 10777 1.204941 GCCTCCACAAGTATGTCGACT 59.795 52.381 17.92 4.95 37.82 4.18
4223 10946 1.517257 CTGGGATGCACGACGTCTC 60.517 63.158 14.70 3.47 35.09 3.36
4304 11060 1.273048 GGGATGTGCATGCAACTTCAA 59.727 47.619 24.58 4.42 0.00 2.69
4415 11205 8.163408 TGTTATGCTATATACTGGCCAAAATCT 58.837 33.333 7.01 0.00 0.00 2.40
4466 11268 6.259550 TCCTTTTCTTTAGCATCTGAAAGC 57.740 37.500 0.00 0.00 33.52 3.51
4501 11303 8.825667 AGCTCTTTTTAAAACTTTGTTTCACA 57.174 26.923 0.00 0.00 0.00 3.58
4514 11316 6.828785 ACTTTGTTTCACAGAATTACAGAGGT 59.171 34.615 0.00 0.00 0.00 3.85
4517 11319 4.350368 TTCACAGAATTACAGAGGTGCA 57.650 40.909 0.00 0.00 0.00 4.57
4570 11372 5.732528 GCATTCTTCACATTAGATGCTGTGG 60.733 44.000 2.14 0.00 42.37 4.17
4589 11391 1.691976 GGGTTTGGGTTCTTTCCTTGG 59.308 52.381 0.00 0.00 0.00 3.61
4592 11394 3.258372 GGTTTGGGTTCTTTCCTTGGATC 59.742 47.826 0.00 0.00 0.00 3.36
4606 11408 2.651382 TGGATCCATGAGCCAATGAG 57.349 50.000 11.44 0.00 45.57 2.90
4607 11409 1.848388 TGGATCCATGAGCCAATGAGT 59.152 47.619 11.44 0.00 45.57 3.41
4608 11410 2.228059 GGATCCATGAGCCAATGAGTG 58.772 52.381 6.95 0.00 38.12 3.51
4609 11411 2.422519 GGATCCATGAGCCAATGAGTGT 60.423 50.000 6.95 0.00 38.12 3.55
4610 11412 2.408271 TCCATGAGCCAATGAGTGTC 57.592 50.000 0.00 0.00 0.00 3.67
4611 11413 1.629861 TCCATGAGCCAATGAGTGTCA 59.370 47.619 0.00 0.00 0.00 3.58
4612 11414 2.040145 TCCATGAGCCAATGAGTGTCAA 59.960 45.455 0.00 0.00 0.00 3.18
4613 11415 2.821378 CCATGAGCCAATGAGTGTCAAA 59.179 45.455 0.00 0.00 0.00 2.69
4614 11416 3.446161 CCATGAGCCAATGAGTGTCAAAT 59.554 43.478 0.00 0.00 0.00 2.32
4615 11417 4.641541 CCATGAGCCAATGAGTGTCAAATA 59.358 41.667 0.00 0.00 0.00 1.40
4616 11418 5.301045 CCATGAGCCAATGAGTGTCAAATAT 59.699 40.000 0.00 0.00 0.00 1.28
4617 11419 6.183360 CCATGAGCCAATGAGTGTCAAATATT 60.183 38.462 0.00 0.00 0.00 1.28
4618 11420 6.198650 TGAGCCAATGAGTGTCAAATATTG 57.801 37.500 0.00 0.00 0.00 1.90
4619 11421 5.125900 TGAGCCAATGAGTGTCAAATATTGG 59.874 40.000 14.44 14.44 46.57 3.16
4620 11422 5.263599 AGCCAATGAGTGTCAAATATTGGA 58.736 37.500 19.63 0.00 46.71 3.53
4621 11423 5.359009 AGCCAATGAGTGTCAAATATTGGAG 59.641 40.000 19.63 3.44 46.71 3.86
4622 11424 5.450965 GCCAATGAGTGTCAAATATTGGAGG 60.451 44.000 19.63 0.00 46.71 4.30
4623 11425 5.653769 CCAATGAGTGTCAAATATTGGAGGT 59.346 40.000 13.89 0.00 46.71 3.85
4624 11426 6.153340 CCAATGAGTGTCAAATATTGGAGGTT 59.847 38.462 13.89 0.00 46.71 3.50
4625 11427 7.309990 CCAATGAGTGTCAAATATTGGAGGTTT 60.310 37.037 13.89 0.00 46.71 3.27
4626 11428 7.781324 ATGAGTGTCAAATATTGGAGGTTTT 57.219 32.000 0.00 0.00 0.00 2.43
4627 11429 6.980593 TGAGTGTCAAATATTGGAGGTTTTG 58.019 36.000 0.00 0.00 0.00 2.44
4628 11430 5.783111 AGTGTCAAATATTGGAGGTTTTGC 58.217 37.500 0.00 0.00 0.00 3.68
4675 11602 5.507985 GCTGTGACTTATGCTTTCTGGTTTT 60.508 40.000 0.00 0.00 0.00 2.43
4735 11662 3.694926 AGAATCTGGAAAAGGAAGGCTG 58.305 45.455 0.00 0.00 0.00 4.85
4737 11664 0.251341 TCTGGAAAAGGAAGGCTGCC 60.251 55.000 11.65 11.65 0.00 4.85
4754 11681 2.730094 CAAGTTGCGGCTTTGGCT 59.270 55.556 0.00 0.00 38.73 4.75
4762 11689 3.381983 GGCTTTGGCTTTCCGGGG 61.382 66.667 0.00 0.00 38.73 5.73
4771 11698 0.966179 GCTTTCCGGGGTTTTCACAT 59.034 50.000 0.00 0.00 0.00 3.21
4780 11707 3.165071 GGGGTTTTCACATGATTCAGGT 58.835 45.455 0.00 0.00 0.00 4.00
4782 11709 4.559153 GGGTTTTCACATGATTCAGGTTG 58.441 43.478 0.32 0.00 0.00 3.77
4792 11719 2.548057 TGATTCAGGTTGTTTGCTCGAC 59.452 45.455 0.00 0.00 0.00 4.20
4799 11726 1.792949 GTTGTTTGCTCGACTCGACAT 59.207 47.619 0.00 0.00 0.00 3.06
4801 11728 0.093705 GTTTGCTCGACTCGACATGC 59.906 55.000 0.00 0.58 0.00 4.06
4809 11736 2.033424 TCGACTCGACATGCTAGGAATG 59.967 50.000 0.00 0.00 0.00 2.67
4819 11746 4.396166 ACATGCTAGGAATGTCGGAAAAAG 59.604 41.667 0.00 0.00 32.83 2.27
4820 11747 3.343617 TGCTAGGAATGTCGGAAAAAGG 58.656 45.455 0.00 0.00 0.00 3.11
4822 11749 3.621461 GCTAGGAATGTCGGAAAAAGGGA 60.621 47.826 0.00 0.00 0.00 4.20
4824 11751 3.421844 AGGAATGTCGGAAAAAGGGAAG 58.578 45.455 0.00 0.00 0.00 3.46
4826 11753 1.545841 ATGTCGGAAAAAGGGAAGGC 58.454 50.000 0.00 0.00 0.00 4.35
4827 11754 0.887387 TGTCGGAAAAAGGGAAGGCG 60.887 55.000 0.00 0.00 0.00 5.52
4828 11755 0.604511 GTCGGAAAAAGGGAAGGCGA 60.605 55.000 0.00 0.00 0.00 5.54
4829 11756 0.108963 TCGGAAAAAGGGAAGGCGAA 59.891 50.000 0.00 0.00 0.00 4.70
4873 11801 0.034059 CTCACAAGGAAGGCGAGTGT 59.966 55.000 0.00 0.00 0.00 3.55
4905 11833 0.540365 TTCTGCCTTTGGAGCCAAGG 60.540 55.000 4.52 4.52 37.24 3.61
4918 11846 3.385577 GAGCCAAGGATGTCGAGTATTC 58.614 50.000 0.00 0.00 0.00 1.75
4929 11857 0.504384 CGAGTATTCGCAGGCATTCG 59.496 55.000 0.00 0.00 40.36 3.34
4948 12564 7.694784 GGCATTCGAATTTATTTAAACACGAGA 59.305 33.333 8.21 6.15 37.37 4.04
4958 12574 9.493206 TTTATTTAAACACGAGACAACAAGAAC 57.507 29.630 0.00 0.00 0.00 3.01
4959 12575 6.730960 TTTAAACACGAGACAACAAGAACT 57.269 33.333 0.00 0.00 0.00 3.01
4964 12580 4.097437 ACACGAGACAACAAGAACTACTCA 59.903 41.667 0.00 0.00 0.00 3.41
4968 12584 6.035758 ACGAGACAACAAGAACTACTCAAAAC 59.964 38.462 0.00 0.00 0.00 2.43
4969 12585 6.035650 CGAGACAACAAGAACTACTCAAAACA 59.964 38.462 0.00 0.00 0.00 2.83
4985 12601 0.550914 AACAAGGTGCACCAGGAGAA 59.449 50.000 36.39 0.00 38.89 2.87
4994 12610 3.382832 CCAGGAGAACCGGCGTCT 61.383 66.667 6.01 7.96 41.83 4.18
5053 12705 3.128349 TCAACTCAAGTCGGCAAGTTAC 58.872 45.455 2.73 0.00 31.06 2.50
5065 13135 2.163613 GGCAAGTTACGAATTTGGGGAG 59.836 50.000 0.00 0.00 0.00 4.30
5076 13147 0.112412 TTTGGGGAGAAGGAAGGCAC 59.888 55.000 0.00 0.00 0.00 5.01
5078 13149 2.677848 GGGAGAAGGAAGGCACCC 59.322 66.667 0.00 0.00 0.00 4.61
5110 13181 4.916041 TCATGGAATTCAGGTTGTCTCT 57.084 40.909 7.93 0.00 0.00 3.10
5111 13182 4.582869 TCATGGAATTCAGGTTGTCTCTG 58.417 43.478 7.93 0.00 0.00 3.35
5115 13194 1.067295 ATTCAGGTTGTCTCTGCCCA 58.933 50.000 0.00 0.00 32.63 5.36
5128 13207 0.971386 CTGCCCACAAGCAAGGAATT 59.029 50.000 0.00 0.00 43.52 2.17
5129 13208 0.680618 TGCCCACAAGCAAGGAATTG 59.319 50.000 0.00 0.00 40.56 2.32
5164 13243 0.325272 GAAGGTCCAGAGTGGGGTTC 59.675 60.000 0.00 0.00 38.32 3.62
5174 13253 0.995024 AGTGGGGTTCATCCTGAAGG 59.005 55.000 0.00 0.00 37.00 3.46
5200 13280 4.639310 GGAATATATGAGCCTTGCATCAGG 59.361 45.833 0.00 0.00 36.95 3.86
5217 13297 5.585445 GCATCAGGAGAGGAAAGCATATATG 59.415 44.000 8.45 8.45 0.00 1.78
5233 13315 6.270927 AGCATATATGGAGTACACCATTGTCT 59.729 38.462 26.83 17.06 47.00 3.41
5234 13316 6.591834 GCATATATGGAGTACACCATTGTCTC 59.408 42.308 26.83 12.21 47.00 3.36
5260 13342 4.259770 GCGAGTAGTAGTTCAGAGACGTAC 60.260 50.000 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.452491 AGGTTGGGGCTTGGAGGT 60.452 61.111 0.00 0.00 0.00 3.85
1 2 2.356667 GAGGTTGGGGCTTGGAGG 59.643 66.667 0.00 0.00 0.00 4.30
3 4 3.170362 CTGAGGTTGGGGCTTGGA 58.830 61.111 0.00 0.00 0.00 3.53
8 9 4.096003 TAGCGCTGAGGTTGGGGC 62.096 66.667 22.90 0.00 40.85 5.80
11 12 0.811616 GGATGTAGCGCTGAGGTTGG 60.812 60.000 22.90 0.00 0.00 3.77
12 13 0.176680 AGGATGTAGCGCTGAGGTTG 59.823 55.000 22.90 0.00 0.00 3.77
13 14 0.461961 GAGGATGTAGCGCTGAGGTT 59.538 55.000 22.90 0.37 0.00 3.50
14 15 1.729470 CGAGGATGTAGCGCTGAGGT 61.729 60.000 22.90 2.74 0.00 3.85
15 16 1.007964 CGAGGATGTAGCGCTGAGG 60.008 63.158 22.90 0.00 0.00 3.86
16 17 0.317436 GTCGAGGATGTAGCGCTGAG 60.317 60.000 22.90 2.11 0.00 3.35
17 18 1.029947 TGTCGAGGATGTAGCGCTGA 61.030 55.000 22.90 6.82 0.00 4.26
18 19 0.031314 ATGTCGAGGATGTAGCGCTG 59.969 55.000 22.90 0.00 0.00 5.18
19 20 0.031314 CATGTCGAGGATGTAGCGCT 59.969 55.000 17.26 17.26 0.00 5.92
20 21 1.552348 GCATGTCGAGGATGTAGCGC 61.552 60.000 0.00 0.00 0.00 5.92
21 22 0.031314 AGCATGTCGAGGATGTAGCG 59.969 55.000 6.29 0.00 0.00 4.26
22 23 1.604185 GGAGCATGTCGAGGATGTAGC 60.604 57.143 6.29 0.00 0.00 3.58
23 24 1.000283 GGGAGCATGTCGAGGATGTAG 60.000 57.143 6.29 0.00 0.00 2.74
24 25 1.040646 GGGAGCATGTCGAGGATGTA 58.959 55.000 6.29 0.00 0.00 2.29
25 26 1.826024 GGGAGCATGTCGAGGATGT 59.174 57.895 6.29 0.00 0.00 3.06
26 27 1.300465 CGGGAGCATGTCGAGGATG 60.300 63.158 0.00 0.00 0.00 3.51
27 28 1.758514 ACGGGAGCATGTCGAGGAT 60.759 57.895 0.00 0.00 0.00 3.24
28 29 2.362503 ACGGGAGCATGTCGAGGA 60.363 61.111 0.00 0.00 0.00 3.71
29 30 2.202797 CACGGGAGCATGTCGAGG 60.203 66.667 0.00 0.00 0.00 4.63
30 31 2.887568 GCACGGGAGCATGTCGAG 60.888 66.667 0.00 0.00 0.00 4.04
31 32 4.451150 GGCACGGGAGCATGTCGA 62.451 66.667 0.00 0.00 35.83 4.20
33 34 2.650813 CTAGGGCACGGGAGCATGTC 62.651 65.000 0.00 0.00 35.83 3.06
34 35 2.687200 TAGGGCACGGGAGCATGT 60.687 61.111 0.00 0.00 35.83 3.21
35 36 2.109799 CTAGGGCACGGGAGCATG 59.890 66.667 0.00 0.00 35.83 4.06
36 37 3.866582 GCTAGGGCACGGGAGCAT 61.867 66.667 5.77 0.00 38.54 3.79
44 45 2.366435 TACCTGGGGCTAGGGCAC 60.366 66.667 11.91 0.00 42.35 5.01
45 46 2.366435 GTACCTGGGGCTAGGGCA 60.366 66.667 11.91 0.00 42.35 5.36
46 47 1.353394 ATTGTACCTGGGGCTAGGGC 61.353 60.000 11.91 5.99 42.35 5.19
47 48 1.222567 AATTGTACCTGGGGCTAGGG 58.777 55.000 11.91 1.77 42.35 3.53
48 49 2.025321 ACAAATTGTACCTGGGGCTAGG 60.025 50.000 0.00 6.77 43.71 3.02
49 50 3.016736 CACAAATTGTACCTGGGGCTAG 58.983 50.000 0.00 0.00 0.00 3.42
50 51 2.882229 GCACAAATTGTACCTGGGGCTA 60.882 50.000 0.00 0.00 0.00 3.93
51 52 1.923356 CACAAATTGTACCTGGGGCT 58.077 50.000 0.00 0.00 0.00 5.19
52 53 0.246360 GCACAAATTGTACCTGGGGC 59.754 55.000 0.00 0.00 0.00 5.80
53 54 1.818674 GAGCACAAATTGTACCTGGGG 59.181 52.381 0.00 0.00 0.00 4.96
54 55 1.818674 GGAGCACAAATTGTACCTGGG 59.181 52.381 0.00 0.00 0.00 4.45
55 56 1.468520 CGGAGCACAAATTGTACCTGG 59.531 52.381 0.00 0.00 0.00 4.45
56 57 2.159627 GTCGGAGCACAAATTGTACCTG 59.840 50.000 0.00 0.00 0.00 4.00
57 58 2.038557 AGTCGGAGCACAAATTGTACCT 59.961 45.455 0.00 0.00 0.00 3.08
58 59 2.423577 AGTCGGAGCACAAATTGTACC 58.576 47.619 0.00 2.48 0.00 3.34
59 60 4.483476 AAAGTCGGAGCACAAATTGTAC 57.517 40.909 0.00 0.00 0.00 2.90
60 61 4.023536 GGAAAAGTCGGAGCACAAATTGTA 60.024 41.667 0.00 0.00 0.00 2.41
61 62 3.243401 GGAAAAGTCGGAGCACAAATTGT 60.243 43.478 0.00 0.00 0.00 2.71
62 63 3.004734 AGGAAAAGTCGGAGCACAAATTG 59.995 43.478 0.00 0.00 0.00 2.32
63 64 3.222603 AGGAAAAGTCGGAGCACAAATT 58.777 40.909 0.00 0.00 0.00 1.82
64 65 2.863809 AGGAAAAGTCGGAGCACAAAT 58.136 42.857 0.00 0.00 0.00 2.32
65 66 2.341846 AGGAAAAGTCGGAGCACAAA 57.658 45.000 0.00 0.00 0.00 2.83
66 67 1.946768 CAAGGAAAAGTCGGAGCACAA 59.053 47.619 0.00 0.00 0.00 3.33
67 68 1.140052 TCAAGGAAAAGTCGGAGCACA 59.860 47.619 0.00 0.00 0.00 4.57
68 69 1.878953 TCAAGGAAAAGTCGGAGCAC 58.121 50.000 0.00 0.00 0.00 4.40
69 70 2.218603 GTTCAAGGAAAAGTCGGAGCA 58.781 47.619 0.00 0.00 0.00 4.26
70 71 2.218603 TGTTCAAGGAAAAGTCGGAGC 58.781 47.619 0.00 0.00 0.00 4.70
71 72 4.893424 TTTGTTCAAGGAAAAGTCGGAG 57.107 40.909 0.00 0.00 0.00 4.63
72 73 5.845391 ATTTTGTTCAAGGAAAAGTCGGA 57.155 34.783 0.00 0.00 0.00 4.55
73 74 6.975772 TGTAATTTTGTTCAAGGAAAAGTCGG 59.024 34.615 0.00 0.00 0.00 4.79
74 75 7.700656 AGTGTAATTTTGTTCAAGGAAAAGTCG 59.299 33.333 0.00 0.00 0.00 4.18
75 76 8.926715 AGTGTAATTTTGTTCAAGGAAAAGTC 57.073 30.769 0.00 0.00 0.00 3.01
76 77 9.719355 AAAGTGTAATTTTGTTCAAGGAAAAGT 57.281 25.926 0.00 0.00 0.00 2.66
77 78 9.971744 CAAAGTGTAATTTTGTTCAAGGAAAAG 57.028 29.630 0.00 0.00 38.55 2.27
89 90 5.212194 AGCGCTACACAAAGTGTAATTTTG 58.788 37.500 8.99 0.00 46.35 2.44
90 91 5.432885 AGCGCTACACAAAGTGTAATTTT 57.567 34.783 8.99 0.00 46.35 1.82
91 92 5.121768 CCTAGCGCTACACAAAGTGTAATTT 59.878 40.000 14.45 1.57 46.35 1.82
92 93 4.630069 CCTAGCGCTACACAAAGTGTAATT 59.370 41.667 14.45 0.00 46.35 1.40
93 94 4.181578 CCTAGCGCTACACAAAGTGTAAT 58.818 43.478 14.45 1.80 46.35 1.89
94 95 3.581755 CCTAGCGCTACACAAAGTGTAA 58.418 45.455 14.45 0.00 46.35 2.41
95 96 2.673043 GCCTAGCGCTACACAAAGTGTA 60.673 50.000 14.45 9.39 45.56 2.90
97 98 0.721718 GCCTAGCGCTACACAAAGTG 59.278 55.000 14.45 0.63 39.75 3.16
98 99 0.391263 GGCCTAGCGCTACACAAAGT 60.391 55.000 14.45 0.00 37.74 2.66
99 100 0.108138 AGGCCTAGCGCTACACAAAG 60.108 55.000 14.45 4.06 37.74 2.77
100 101 0.323629 AAGGCCTAGCGCTACACAAA 59.676 50.000 14.45 0.00 37.74 2.83
101 102 1.187974 TAAGGCCTAGCGCTACACAA 58.812 50.000 14.45 0.00 37.74 3.33
102 103 1.187974 TTAAGGCCTAGCGCTACACA 58.812 50.000 14.45 0.00 37.74 3.72
103 104 2.528041 ATTAAGGCCTAGCGCTACAC 57.472 50.000 14.45 8.25 37.74 2.90
104 105 2.432874 TGAATTAAGGCCTAGCGCTACA 59.567 45.455 14.45 2.80 37.74 2.74
105 106 2.801111 GTGAATTAAGGCCTAGCGCTAC 59.199 50.000 14.45 4.58 37.74 3.58
106 107 2.224209 GGTGAATTAAGGCCTAGCGCTA 60.224 50.000 17.75 17.75 37.74 4.26
107 108 1.475213 GGTGAATTAAGGCCTAGCGCT 60.475 52.381 17.26 17.26 37.74 5.92
108 109 0.945099 GGTGAATTAAGGCCTAGCGC 59.055 55.000 5.16 0.00 0.00 5.92
109 110 1.134220 TGGGTGAATTAAGGCCTAGCG 60.134 52.381 5.16 0.00 0.00 4.26
110 111 2.729028 TGGGTGAATTAAGGCCTAGC 57.271 50.000 5.16 0.00 0.00 3.42
111 112 4.713792 AGATGGGTGAATTAAGGCCTAG 57.286 45.455 5.16 0.00 0.00 3.02
112 113 6.780198 AATAGATGGGTGAATTAAGGCCTA 57.220 37.500 5.16 0.00 0.00 3.93
113 114 5.669798 AATAGATGGGTGAATTAAGGCCT 57.330 39.130 0.00 0.00 0.00 5.19
114 115 7.231467 TCTAAATAGATGGGTGAATTAAGGCC 58.769 38.462 0.00 0.00 0.00 5.19
115 116 8.870075 ATCTAAATAGATGGGTGAATTAAGGC 57.130 34.615 2.19 0.00 41.28 4.35
120 121 8.386264 CCTGGTATCTAAATAGATGGGTGAATT 58.614 37.037 12.20 0.00 42.66 2.17
121 122 7.517604 ACCTGGTATCTAAATAGATGGGTGAAT 59.482 37.037 12.20 0.00 42.66 2.57
122 123 6.849697 ACCTGGTATCTAAATAGATGGGTGAA 59.150 38.462 12.20 0.00 42.66 3.18
123 124 6.390504 ACCTGGTATCTAAATAGATGGGTGA 58.609 40.000 12.20 0.00 42.66 4.02
124 125 6.572509 CGACCTGGTATCTAAATAGATGGGTG 60.573 46.154 12.20 7.14 42.66 4.61
125 126 5.480772 CGACCTGGTATCTAAATAGATGGGT 59.519 44.000 12.20 13.07 42.66 4.51
126 127 5.480772 ACGACCTGGTATCTAAATAGATGGG 59.519 44.000 12.20 10.72 42.66 4.00
127 128 6.208797 TCACGACCTGGTATCTAAATAGATGG 59.791 42.308 12.20 7.77 42.66 3.51
128 129 7.215719 TCACGACCTGGTATCTAAATAGATG 57.784 40.000 12.20 0.00 42.66 2.90
129 130 8.423906 AATCACGACCTGGTATCTAAATAGAT 57.576 34.615 0.00 7.98 44.69 1.98
130 131 7.834881 AATCACGACCTGGTATCTAAATAGA 57.165 36.000 0.00 0.00 36.65 1.98
131 132 7.385205 CCAAATCACGACCTGGTATCTAAATAG 59.615 40.741 0.00 0.00 0.00 1.73
132 133 7.147620 ACCAAATCACGACCTGGTATCTAAATA 60.148 37.037 0.00 0.00 40.42 1.40
133 134 6.055588 CCAAATCACGACCTGGTATCTAAAT 58.944 40.000 0.00 0.00 0.00 1.40
134 135 5.046159 ACCAAATCACGACCTGGTATCTAAA 60.046 40.000 0.00 0.00 40.42 1.85
135 136 4.468510 ACCAAATCACGACCTGGTATCTAA 59.531 41.667 0.00 0.00 40.42 2.10
136 137 4.028131 ACCAAATCACGACCTGGTATCTA 58.972 43.478 0.00 0.00 40.42 1.98
137 138 2.838202 ACCAAATCACGACCTGGTATCT 59.162 45.455 0.00 0.00 40.42 1.98
138 139 3.261981 ACCAAATCACGACCTGGTATC 57.738 47.619 0.00 0.00 40.42 2.24
139 140 3.713826 AACCAAATCACGACCTGGTAT 57.286 42.857 0.00 0.00 41.36 2.73
140 141 3.142951 CAAACCAAATCACGACCTGGTA 58.857 45.455 0.00 0.00 41.36 3.25
141 142 1.953686 CAAACCAAATCACGACCTGGT 59.046 47.619 0.00 0.00 44.12 4.00
142 143 2.226330 TCAAACCAAATCACGACCTGG 58.774 47.619 0.00 0.00 34.95 4.45
143 144 4.229096 CAATCAAACCAAATCACGACCTG 58.771 43.478 0.00 0.00 0.00 4.00
144 145 3.255642 CCAATCAAACCAAATCACGACCT 59.744 43.478 0.00 0.00 0.00 3.85
145 146 3.254657 TCCAATCAAACCAAATCACGACC 59.745 43.478 0.00 0.00 0.00 4.79
146 147 4.226761 GTCCAATCAAACCAAATCACGAC 58.773 43.478 0.00 0.00 0.00 4.34
147 148 3.058570 CGTCCAATCAAACCAAATCACGA 60.059 43.478 0.00 0.00 0.00 4.35
148 149 3.233578 CGTCCAATCAAACCAAATCACG 58.766 45.455 0.00 0.00 0.00 4.35
149 150 2.986479 GCGTCCAATCAAACCAAATCAC 59.014 45.455 0.00 0.00 0.00 3.06
150 151 2.625314 TGCGTCCAATCAAACCAAATCA 59.375 40.909 0.00 0.00 0.00 2.57
151 152 3.296322 TGCGTCCAATCAAACCAAATC 57.704 42.857 0.00 0.00 0.00 2.17
152 153 3.959535 ATGCGTCCAATCAAACCAAAT 57.040 38.095 0.00 0.00 0.00 2.32
153 154 4.855715 TTATGCGTCCAATCAAACCAAA 57.144 36.364 0.00 0.00 0.00 3.28
154 155 4.855715 TTTATGCGTCCAATCAAACCAA 57.144 36.364 0.00 0.00 0.00 3.67
155 156 5.398603 AATTTATGCGTCCAATCAAACCA 57.601 34.783 0.00 0.00 0.00 3.67
156 157 7.096640 CGAATAATTTATGCGTCCAATCAAACC 60.097 37.037 8.40 0.00 32.51 3.27
157 158 7.764060 CGAATAATTTATGCGTCCAATCAAAC 58.236 34.615 8.40 0.00 32.51 2.93
158 159 7.906611 CGAATAATTTATGCGTCCAATCAAA 57.093 32.000 8.40 0.00 32.51 2.69
168 169 4.219033 GCCTCCAACGAATAATTTATGCG 58.781 43.478 14.04 14.04 42.93 4.73
169 170 4.219033 CGCCTCCAACGAATAATTTATGC 58.781 43.478 0.00 0.00 0.00 3.14
170 171 5.418310 ACGCCTCCAACGAATAATTTATG 57.582 39.130 0.00 0.00 0.00 1.90
171 172 5.587043 TCAACGCCTCCAACGAATAATTTAT 59.413 36.000 0.00 0.00 0.00 1.40
172 173 4.936411 TCAACGCCTCCAACGAATAATTTA 59.064 37.500 0.00 0.00 0.00 1.40
173 174 3.754323 TCAACGCCTCCAACGAATAATTT 59.246 39.130 0.00 0.00 0.00 1.82
174 175 3.340034 TCAACGCCTCCAACGAATAATT 58.660 40.909 0.00 0.00 0.00 1.40
175 176 2.980568 TCAACGCCTCCAACGAATAAT 58.019 42.857 0.00 0.00 0.00 1.28
176 177 2.459060 TCAACGCCTCCAACGAATAA 57.541 45.000 0.00 0.00 0.00 1.40
177 178 2.343101 CTTCAACGCCTCCAACGAATA 58.657 47.619 0.00 0.00 0.00 1.75
178 179 1.156736 CTTCAACGCCTCCAACGAAT 58.843 50.000 0.00 0.00 0.00 3.34
179 180 0.882927 CCTTCAACGCCTCCAACGAA 60.883 55.000 0.00 0.00 0.00 3.85
180 181 1.301401 CCTTCAACGCCTCCAACGA 60.301 57.895 0.00 0.00 0.00 3.85
181 182 2.325082 CCCTTCAACGCCTCCAACG 61.325 63.158 0.00 0.00 0.00 4.10
182 183 1.971695 CCCCTTCAACGCCTCCAAC 60.972 63.158 0.00 0.00 0.00 3.77
183 184 2.434331 CCCCTTCAACGCCTCCAA 59.566 61.111 0.00 0.00 0.00 3.53
184 185 3.646715 CCCCCTTCAACGCCTCCA 61.647 66.667 0.00 0.00 0.00 3.86
203 204 3.787001 CTTCCTCCCGCTCCCCAC 61.787 72.222 0.00 0.00 0.00 4.61
207 208 4.168291 CTGCCTTCCTCCCGCTCC 62.168 72.222 0.00 0.00 0.00 4.70
208 209 4.847444 GCTGCCTTCCTCCCGCTC 62.847 72.222 0.00 0.00 0.00 5.03
211 212 3.672295 GACTGCTGCCTTCCTCCCG 62.672 68.421 0.00 0.00 0.00 5.14
212 213 1.919600 ATGACTGCTGCCTTCCTCCC 61.920 60.000 0.00 0.00 0.00 4.30
213 214 0.034670 AATGACTGCTGCCTTCCTCC 60.035 55.000 0.00 0.00 0.00 4.30
214 215 1.471684 CAAATGACTGCTGCCTTCCTC 59.528 52.381 0.00 0.00 0.00 3.71
215 216 1.542492 CAAATGACTGCTGCCTTCCT 58.458 50.000 0.00 0.00 0.00 3.36
216 217 0.108945 GCAAATGACTGCTGCCTTCC 60.109 55.000 0.00 0.00 39.34 3.46
217 218 3.413522 GCAAATGACTGCTGCCTTC 57.586 52.632 0.00 0.00 39.34 3.46
221 222 4.096984 AGTTATTAGGCAAATGACTGCTGC 59.903 41.667 0.00 0.00 41.49 5.25
222 223 5.824904 AGTTATTAGGCAAATGACTGCTG 57.175 39.130 0.00 0.00 41.49 4.41
226 227 7.394816 ACAGTACAGTTATTAGGCAAATGACT 58.605 34.615 0.00 0.00 43.25 3.41
227 228 7.611213 ACAGTACAGTTATTAGGCAAATGAC 57.389 36.000 0.00 0.00 34.96 3.06
228 229 9.378551 CTTACAGTACAGTTATTAGGCAAATGA 57.621 33.333 0.00 0.00 0.00 2.57
229 230 9.162764 ACTTACAGTACAGTTATTAGGCAAATG 57.837 33.333 0.00 0.00 0.00 2.32
230 231 9.162764 CACTTACAGTACAGTTATTAGGCAAAT 57.837 33.333 0.00 0.00 0.00 2.32
231 232 8.369424 TCACTTACAGTACAGTTATTAGGCAAA 58.631 33.333 0.00 0.00 0.00 3.68
232 233 7.898918 TCACTTACAGTACAGTTATTAGGCAA 58.101 34.615 0.00 0.00 0.00 4.52
233 234 7.470935 TCACTTACAGTACAGTTATTAGGCA 57.529 36.000 0.00 0.00 0.00 4.75
234 235 8.654215 GTTTCACTTACAGTACAGTTATTAGGC 58.346 37.037 0.00 0.00 0.00 3.93
235 236 9.701098 TGTTTCACTTACAGTACAGTTATTAGG 57.299 33.333 0.00 0.00 0.00 2.69
237 238 9.184062 CGTGTTTCACTTACAGTACAGTTATTA 57.816 33.333 0.00 0.00 31.34 0.98
238 239 7.922278 TCGTGTTTCACTTACAGTACAGTTATT 59.078 33.333 0.00 0.00 31.34 1.40
239 240 7.380602 GTCGTGTTTCACTTACAGTACAGTTAT 59.619 37.037 0.00 0.00 31.34 1.89
240 241 6.692681 GTCGTGTTTCACTTACAGTACAGTTA 59.307 38.462 0.00 0.00 31.34 2.24
241 242 5.517770 GTCGTGTTTCACTTACAGTACAGTT 59.482 40.000 0.00 0.00 31.34 3.16
242 243 5.039333 GTCGTGTTTCACTTACAGTACAGT 58.961 41.667 0.00 0.00 31.34 3.55
243 244 5.038683 TGTCGTGTTTCACTTACAGTACAG 58.961 41.667 0.00 0.00 31.34 2.74
244 245 4.996344 TGTCGTGTTTCACTTACAGTACA 58.004 39.130 0.00 0.00 31.34 2.90
245 246 4.085210 GCTGTCGTGTTTCACTTACAGTAC 60.085 45.833 21.36 10.80 42.51 2.73
246 247 4.046462 GCTGTCGTGTTTCACTTACAGTA 58.954 43.478 21.36 0.00 42.51 2.74
247 248 2.864343 GCTGTCGTGTTTCACTTACAGT 59.136 45.455 21.36 0.00 42.51 3.55
248 249 2.221055 GGCTGTCGTGTTTCACTTACAG 59.779 50.000 18.74 18.74 42.95 2.74
249 250 2.206750 GGCTGTCGTGTTTCACTTACA 58.793 47.619 0.00 2.63 31.34 2.41
250 251 1.529865 GGGCTGTCGTGTTTCACTTAC 59.470 52.381 0.00 0.00 31.34 2.34
251 252 1.139256 TGGGCTGTCGTGTTTCACTTA 59.861 47.619 0.00 0.00 31.34 2.24
252 253 0.107410 TGGGCTGTCGTGTTTCACTT 60.107 50.000 0.00 0.00 31.34 3.16
253 254 0.532862 CTGGGCTGTCGTGTTTCACT 60.533 55.000 0.00 0.00 31.34 3.41
254 255 1.507141 CCTGGGCTGTCGTGTTTCAC 61.507 60.000 0.00 0.00 0.00 3.18
255 256 1.227823 CCTGGGCTGTCGTGTTTCA 60.228 57.895 0.00 0.00 0.00 2.69
256 257 0.818040 AACCTGGGCTGTCGTGTTTC 60.818 55.000 0.00 0.00 0.00 2.78
257 258 0.818040 GAACCTGGGCTGTCGTGTTT 60.818 55.000 0.00 0.00 0.00 2.83
258 259 1.227853 GAACCTGGGCTGTCGTGTT 60.228 57.895 0.00 0.00 0.00 3.32
259 260 2.426023 GAACCTGGGCTGTCGTGT 59.574 61.111 0.00 0.00 0.00 4.49
260 261 1.961277 GTGAACCTGGGCTGTCGTG 60.961 63.158 0.00 0.00 0.00 4.35
261 262 1.978455 TTGTGAACCTGGGCTGTCGT 61.978 55.000 0.00 0.00 0.00 4.34
262 263 0.817634 TTTGTGAACCTGGGCTGTCG 60.818 55.000 0.00 0.00 0.00 4.35
263 264 1.620822 ATTTGTGAACCTGGGCTGTC 58.379 50.000 0.00 0.00 0.00 3.51
264 265 2.969821 TATTTGTGAACCTGGGCTGT 57.030 45.000 0.00 0.00 0.00 4.40
265 266 2.094545 GCTTATTTGTGAACCTGGGCTG 60.095 50.000 0.00 0.00 0.00 4.85
266 267 2.171003 GCTTATTTGTGAACCTGGGCT 58.829 47.619 0.00 0.00 0.00 5.19
267 268 1.135402 CGCTTATTTGTGAACCTGGGC 60.135 52.381 0.00 0.00 0.00 5.36
268 269 2.159382 ACGCTTATTTGTGAACCTGGG 58.841 47.619 0.00 0.00 0.00 4.45
269 270 3.252215 TCAACGCTTATTTGTGAACCTGG 59.748 43.478 0.00 0.00 0.00 4.45
270 271 4.466828 CTCAACGCTTATTTGTGAACCTG 58.533 43.478 0.00 0.00 0.00 4.00
271 272 3.502211 CCTCAACGCTTATTTGTGAACCT 59.498 43.478 0.00 0.00 0.00 3.50
272 273 3.500680 TCCTCAACGCTTATTTGTGAACC 59.499 43.478 0.00 0.00 0.00 3.62
273 274 4.742438 TCCTCAACGCTTATTTGTGAAC 57.258 40.909 0.00 0.00 0.00 3.18
274 275 4.379394 GCATCCTCAACGCTTATTTGTGAA 60.379 41.667 0.00 0.00 0.00 3.18
275 276 3.126858 GCATCCTCAACGCTTATTTGTGA 59.873 43.478 0.00 0.00 0.00 3.58
276 277 3.127548 AGCATCCTCAACGCTTATTTGTG 59.872 43.478 0.00 0.00 29.87 3.33
277 278 3.347216 AGCATCCTCAACGCTTATTTGT 58.653 40.909 0.00 0.00 29.87 2.83
278 279 4.095483 AGAAGCATCCTCAACGCTTATTTG 59.905 41.667 0.00 0.00 45.63 2.32
279 280 4.265073 AGAAGCATCCTCAACGCTTATTT 58.735 39.130 0.00 0.00 45.63 1.40
280 281 3.873952 GAGAAGCATCCTCAACGCTTATT 59.126 43.478 0.00 0.00 45.63 1.40
281 282 3.133721 AGAGAAGCATCCTCAACGCTTAT 59.866 43.478 0.00 0.00 45.63 1.73
290 291 4.379652 GAATCTCCAAGAGAAGCATCCTC 58.620 47.826 0.00 0.00 42.27 3.71
297 298 2.419297 CCCACCGAATCTCCAAGAGAAG 60.419 54.545 0.00 0.00 42.27 2.85
320 321 3.120025 CCCTCGACGAGACATCTATCATG 60.120 52.174 26.11 4.53 0.00 3.07
326 327 2.473760 CGCCCTCGACGAGACATCT 61.474 63.158 26.11 0.00 38.10 2.90
333 334 1.779025 GCAGTATACGCCCTCGACGA 61.779 60.000 0.00 0.00 39.41 4.20
344 345 5.435820 ACTAAAGAGTAGCGGCAGTATAC 57.564 43.478 1.45 0.00 32.65 1.47
361 362 9.913310 TTGAATCCATAACATGATGGTACTAAA 57.087 29.630 12.00 2.08 45.77 1.85
368 369 8.951787 ACAAAATTGAATCCATAACATGATGG 57.048 30.769 0.00 3.00 46.82 3.51
428 430 2.917971 CCGTCATCGAACTTCTTCAGAC 59.082 50.000 0.00 0.00 39.71 3.51
435 437 2.862921 GCTATCCCCGTCATCGAACTTC 60.863 54.545 0.00 0.00 39.71 3.01
458 460 4.675671 CGCTTGCGGGGAAATTAATTAACA 60.676 41.667 7.16 0.00 0.00 2.41
480 482 0.508641 CTTGGTCTGTCTTTGTCGCG 59.491 55.000 0.00 0.00 0.00 5.87
497 499 0.035152 TGCCATGATGCGGAAGACTT 60.035 50.000 0.00 0.00 0.00 3.01
519 521 5.721480 TCAGTTATCATGGAGAAGAAGTGGA 59.279 40.000 0.00 0.00 31.94 4.02
529 531 2.171237 TGCCAGGTCAGTTATCATGGAG 59.829 50.000 0.00 0.00 37.66 3.86
557 559 3.495100 CCAAGCACACCTTAGTTGACTCT 60.495 47.826 0.00 0.00 31.00 3.24
570 572 8.095169 AGTATACTATTATAAGCCCAAGCACAC 58.905 37.037 2.75 0.00 43.56 3.82
586 588 7.469732 GCTGTACGGTTCAGGAAGTATACTATT 60.470 40.741 15.26 0.00 33.98 1.73
588 590 5.297776 GCTGTACGGTTCAGGAAGTATACTA 59.702 44.000 15.26 0.00 33.98 1.82
592 594 2.167900 GGCTGTACGGTTCAGGAAGTAT 59.832 50.000 15.26 0.00 33.98 2.12
606 608 3.475774 CGTCGCGGTTGGCTGTAC 61.476 66.667 6.13 0.00 40.44 2.90
625 627 6.016360 CACCATTATTTCTCCGCCATCAATTA 60.016 38.462 0.00 0.00 0.00 1.40
626 628 4.895297 ACCATTATTTCTCCGCCATCAATT 59.105 37.500 0.00 0.00 0.00 2.32
730 769 8.580720 TCTATCCTCTGCTTGTTATACAATCTC 58.419 37.037 0.00 0.00 37.48 2.75
1258 1338 1.760613 GACACGGATTGGGATGGTAGA 59.239 52.381 0.00 0.00 0.00 2.59
1260 1340 0.462375 CGACACGGATTGGGATGGTA 59.538 55.000 0.00 0.00 0.00 3.25
1305 1385 3.511477 ACTGGATAGTGTTCCTGTGAGT 58.489 45.455 2.67 0.00 43.78 3.41
1438 2019 3.756739 CTGCAAGGTTGTTGCCAAA 57.243 47.368 7.24 0.00 44.32 3.28
1472 2125 3.036819 AGAGATGCAGATGCTCCTAACA 58.963 45.455 6.35 0.00 42.66 2.41
1473 2126 3.749665 AGAGATGCAGATGCTCCTAAC 57.250 47.619 6.35 0.00 42.66 2.34
1479 2132 2.121948 TGGGTAAGAGATGCAGATGCT 58.878 47.619 6.35 0.00 42.66 3.79
1498 2151 9.529325 AAGAATATTGAATGCAAGATTGACATG 57.471 29.630 11.07 0.00 43.72 3.21
1531 2184 8.502738 ACTATTTGCTAAGGAATCAGGGATAAA 58.497 33.333 0.00 0.00 0.00 1.40
1582 2235 5.968167 TCACCCCAGATAAGTTATTACCTGT 59.032 40.000 0.00 0.00 31.32 4.00
1585 2238 6.473758 GGATCACCCCAGATAAGTTATTACC 58.526 44.000 0.00 0.00 0.00 2.85
1629 2282 4.638865 AGGTCAACAGTAACAAGTTTGGAC 59.361 41.667 0.00 0.00 0.00 4.02
1684 2337 4.461781 CAGAGCTGACATCTTTGGGAAATT 59.538 41.667 0.00 0.00 0.00 1.82
1691 2344 2.424557 ACTGCAGAGCTGACATCTTTG 58.575 47.619 23.35 0.00 0.00 2.77
1776 2429 2.026915 TGCTAGCAGGAGAGAATGCAAA 60.027 45.455 14.93 0.00 45.01 3.68
1785 2438 2.878406 GTTGTTTTGTGCTAGCAGGAGA 59.122 45.455 20.03 1.73 0.00 3.71
1814 2467 3.901222 ACCCAAAGTTTCCGGAATTGATT 59.099 39.130 24.21 12.95 0.00 2.57
1911 2564 1.366679 AGAGCGCAAGTGATGACATG 58.633 50.000 11.47 0.00 41.68 3.21
1912 2565 2.105006 AAGAGCGCAAGTGATGACAT 57.895 45.000 11.47 0.00 41.68 3.06
1923 2576 2.826428 CTGCCTAAGATAAAGAGCGCA 58.174 47.619 11.47 0.00 0.00 6.09
1924 2577 1.529012 GCTGCCTAAGATAAAGAGCGC 59.471 52.381 0.00 0.00 0.00 5.92
1926 2579 3.001736 CGTTGCTGCCTAAGATAAAGAGC 59.998 47.826 0.00 0.00 0.00 4.09
1934 2587 1.975660 AAAACCGTTGCTGCCTAAGA 58.024 45.000 0.00 0.00 0.00 2.10
2105 2758 2.254152 TCCTAGAGAAGGCACCACAT 57.746 50.000 0.00 0.00 46.10 3.21
2115 2768 3.846588 AGTTTGCCAAGGATCCTAGAGAA 59.153 43.478 16.55 3.36 0.00 2.87
2169 2822 1.495579 ATGCCCAGTCACCAGCTTCT 61.496 55.000 0.00 0.00 0.00 2.85
2207 2860 7.530010 TGATAATCTTAACAAGCTTGAGCAAC 58.470 34.615 32.50 12.36 45.16 4.17
2214 2867 7.284034 CCATCCACTGATAATCTTAACAAGCTT 59.716 37.037 0.00 0.00 0.00 3.74
2216 2869 6.016777 CCCATCCACTGATAATCTTAACAAGC 60.017 42.308 0.00 0.00 0.00 4.01
2217 2870 7.282585 TCCCATCCACTGATAATCTTAACAAG 58.717 38.462 0.00 0.00 0.00 3.16
2274 2927 1.138859 AGCTTTGTTGAAAGGTTGCCC 59.861 47.619 0.00 0.00 45.59 5.36
2314 2967 5.728637 ATGTTTCCTGAAATCTGGTTTCC 57.271 39.130 10.68 0.00 44.53 3.13
2328 2981 4.346418 CCTATCTCAGCTGGTATGTTTCCT 59.654 45.833 15.13 0.00 0.00 3.36
2359 3012 2.028112 TGTCAAGCAGAGCGAGGTTTAT 60.028 45.455 0.00 0.00 0.00 1.40
2383 3036 0.252479 CCTGAGAGCATGTTCTGGCT 59.748 55.000 17.57 0.00 44.48 4.75
2416 3069 2.099756 AGTTGCTCAAGTTCCAAACTGC 59.900 45.455 0.00 0.00 41.91 4.40
2532 3185 7.537596 TGGTATGTTTCCAGACAATTCATTT 57.462 32.000 0.00 0.00 34.44 2.32
2587 3240 3.563808 TGGTTGACTGACATGTTTAGCAC 59.436 43.478 0.00 1.54 0.00 4.40
2703 3356 5.988310 TGATCAGGTTACTAACTTCCGAA 57.012 39.130 0.00 0.00 0.00 4.30
2808 3461 3.125829 GCATGTTGCTTTCGATCTGAAGA 59.874 43.478 8.59 0.00 40.96 2.87
2878 3531 6.723298 ATTGTTCTCGGACAGATCTATCTT 57.277 37.500 0.13 0.00 34.22 2.40
2921 3574 3.552684 GCTGCTGAAGTTGCCAAAATACA 60.553 43.478 0.00 0.00 0.00 2.29
3000 3653 6.290294 ACTGCAGCTGAATTTCCAAATATT 57.710 33.333 20.43 0.00 0.00 1.28
3031 3684 2.095059 CACATAAGCCTGTGTTGCCTTC 60.095 50.000 4.04 0.00 41.29 3.46
3081 9620 2.274542 TCTGAGGAGGTTGGGCAAATA 58.725 47.619 0.00 0.00 0.00 1.40
3389 9940 3.437049 GCTATTTCTTGAACCTTGCTCGT 59.563 43.478 0.00 0.00 0.00 4.18
3420 9971 3.625764 TGTGTTTTAGCACTTCACACTCC 59.374 43.478 0.00 0.00 38.84 3.85
3613 10164 0.178767 TCAGCAGCAATGCGTATCCT 59.821 50.000 0.00 0.00 40.27 3.24
3621 10172 4.659088 CAGAAACTACATCAGCAGCAATG 58.341 43.478 0.00 0.24 0.00 2.82
3638 10189 4.162131 TGTGCATATAGTCCAGAGCAGAAA 59.838 41.667 0.00 0.00 32.03 2.52
3787 10476 0.550914 ACACCAACCAAGCCTTCTGA 59.449 50.000 0.00 0.00 0.00 3.27
3908 10631 6.267471 GCATCCCATCCCATATTCTGTAAAAA 59.733 38.462 0.00 0.00 0.00 1.94
4054 10777 2.040178 GATCCTCTCGGGGAAAGCTAA 58.960 52.381 0.00 0.00 39.02 3.09
4372 11162 7.437748 AGCATAACAGTGGATACTAATCAGAC 58.562 38.462 0.00 0.00 34.74 3.51
4415 11205 3.069443 TCAATATGAGATACTGCACCGCA 59.931 43.478 0.00 0.00 36.92 5.69
4466 11268 2.924432 AAAAAGAGCTTCGACGTTCG 57.076 45.000 0.20 0.00 42.10 3.95
4501 11303 5.416952 CAGGAAATTGCACCTCTGTAATTCT 59.583 40.000 0.00 0.00 40.61 2.40
4514 11316 2.613474 GCATTTCAGGCAGGAAATTGCA 60.613 45.455 20.36 0.00 43.13 4.08
4517 11319 5.945144 AATAGCATTTCAGGCAGGAAATT 57.055 34.783 12.62 4.87 43.13 1.82
4570 11372 2.673258 TCCAAGGAAAGAACCCAAACC 58.327 47.619 0.00 0.00 0.00 3.27
4589 11391 2.877168 GACACTCATTGGCTCATGGATC 59.123 50.000 0.00 0.00 0.00 3.36
4592 11394 2.118313 TGACACTCATTGGCTCATGG 57.882 50.000 0.00 0.00 32.31 3.66
4602 11404 7.605449 CAAAACCTCCAATATTTGACACTCAT 58.395 34.615 0.00 0.00 35.34 2.90
4603 11405 6.516527 GCAAAACCTCCAATATTTGACACTCA 60.517 38.462 0.00 0.00 35.34 3.41
4604 11406 5.863935 GCAAAACCTCCAATATTTGACACTC 59.136 40.000 0.00 0.00 35.34 3.51
4606 11408 5.405269 GTGCAAAACCTCCAATATTTGACAC 59.595 40.000 0.00 0.00 35.34 3.67
4607 11409 5.069648 TGTGCAAAACCTCCAATATTTGACA 59.930 36.000 0.00 0.00 35.34 3.58
4608 11410 5.537188 TGTGCAAAACCTCCAATATTTGAC 58.463 37.500 0.00 0.00 35.34 3.18
4609 11411 5.798125 TGTGCAAAACCTCCAATATTTGA 57.202 34.783 0.00 0.00 35.34 2.69
4610 11412 7.437793 AAATGTGCAAAACCTCCAATATTTG 57.562 32.000 0.00 0.00 36.19 2.32
4611 11413 9.165035 CATAAATGTGCAAAACCTCCAATATTT 57.835 29.630 0.00 0.00 0.00 1.40
4612 11414 7.280652 GCATAAATGTGCAAAACCTCCAATATT 59.719 33.333 0.00 0.00 44.43 1.28
4613 11415 6.762661 GCATAAATGTGCAAAACCTCCAATAT 59.237 34.615 0.00 0.00 44.43 1.28
4614 11416 6.105333 GCATAAATGTGCAAAACCTCCAATA 58.895 36.000 0.00 0.00 44.43 1.90
4615 11417 4.937015 GCATAAATGTGCAAAACCTCCAAT 59.063 37.500 0.00 0.00 44.43 3.16
4616 11418 4.314121 GCATAAATGTGCAAAACCTCCAA 58.686 39.130 0.00 0.00 44.43 3.53
4617 11419 3.924144 GCATAAATGTGCAAAACCTCCA 58.076 40.909 0.00 0.00 44.43 3.86
4627 11429 5.333339 CCACGTAGTAGATGCATAAATGTGC 60.333 44.000 0.00 0.00 41.61 4.57
4628 11430 5.333339 GCCACGTAGTAGATGCATAAATGTG 60.333 44.000 0.00 5.51 41.61 3.21
4647 11449 1.442769 AAGCATAAGTCACAGCCACG 58.557 50.000 0.00 0.00 0.00 4.94
4693 11620 2.341846 AACTTTGCCGAGTTGAGGAA 57.658 45.000 1.44 0.00 38.39 3.36
4737 11664 0.530431 AAAGCCAAAGCCGCAACTTG 60.530 50.000 0.00 0.00 41.25 3.16
4754 11681 2.366640 TCATGTGAAAACCCCGGAAA 57.633 45.000 0.73 0.00 0.00 3.13
4762 11689 6.509997 GCAAACAACCTGAATCATGTGAAAAC 60.510 38.462 0.00 0.00 0.00 2.43
4771 11698 2.548057 GTCGAGCAAACAACCTGAATCA 59.452 45.455 0.00 0.00 0.00 2.57
4780 11707 1.792367 CATGTCGAGTCGAGCAAACAA 59.208 47.619 17.12 0.00 36.23 2.83
4782 11709 0.093705 GCATGTCGAGTCGAGCAAAC 59.906 55.000 17.12 4.82 36.23 2.93
4799 11726 3.343617 CCTTTTTCCGACATTCCTAGCA 58.656 45.455 0.00 0.00 0.00 3.49
4801 11728 4.216411 TCCCTTTTTCCGACATTCCTAG 57.784 45.455 0.00 0.00 0.00 3.02
4809 11736 0.604511 TCGCCTTCCCTTTTTCCGAC 60.605 55.000 0.00 0.00 0.00 4.79
4819 11746 0.953960 TTTCTTCGCTTCGCCTTCCC 60.954 55.000 0.00 0.00 0.00 3.97
4820 11747 0.166161 GTTTCTTCGCTTCGCCTTCC 59.834 55.000 0.00 0.00 0.00 3.46
4822 11749 0.599204 TCGTTTCTTCGCTTCGCCTT 60.599 50.000 0.00 0.00 0.00 4.35
4824 11751 1.130009 GTCGTTTCTTCGCTTCGCC 59.870 57.895 0.00 0.00 0.00 5.54
4826 11753 0.359205 CGAGTCGTTTCTTCGCTTCG 59.641 55.000 3.82 0.00 33.36 3.79
4827 11754 0.091511 GCGAGTCGTTTCTTCGCTTC 59.908 55.000 15.08 0.00 45.01 3.86
4828 11755 2.142641 GCGAGTCGTTTCTTCGCTT 58.857 52.632 15.08 0.00 45.01 4.68
4829 11756 3.843985 GCGAGTCGTTTCTTCGCT 58.156 55.556 15.08 0.00 45.01 4.93
4873 11801 2.582052 AGGCAGAATCAAAACCGACAA 58.418 42.857 0.00 0.00 0.00 3.18
4918 11846 6.252441 TGTTTAAATAAATTCGAATGCCTGCG 59.748 34.615 12.25 0.00 0.00 5.18
4948 12564 6.433093 ACCTTGTTTTGAGTAGTTCTTGTTGT 59.567 34.615 0.00 0.00 0.00 3.32
4951 12567 5.163652 GCACCTTGTTTTGAGTAGTTCTTGT 60.164 40.000 0.00 0.00 0.00 3.16
4956 12572 3.380320 GGTGCACCTTGTTTTGAGTAGTT 59.620 43.478 29.12 0.00 0.00 2.24
4957 12573 2.949644 GGTGCACCTTGTTTTGAGTAGT 59.050 45.455 29.12 0.00 0.00 2.73
4958 12574 2.948979 TGGTGCACCTTGTTTTGAGTAG 59.051 45.455 34.75 0.00 36.82 2.57
4959 12575 2.948979 CTGGTGCACCTTGTTTTGAGTA 59.051 45.455 34.75 10.56 36.82 2.59
4964 12580 1.064017 TCTCCTGGTGCACCTTGTTTT 60.064 47.619 34.75 0.00 36.82 2.43
4968 12584 0.890996 GGTTCTCCTGGTGCACCTTG 60.891 60.000 34.75 25.74 36.82 3.61
4969 12585 1.456287 GGTTCTCCTGGTGCACCTT 59.544 57.895 34.75 0.00 36.82 3.50
4999 12651 5.858581 CCTGAAATTTAAGAAACAGCGGAAG 59.141 40.000 3.89 0.00 0.00 3.46
5000 12652 5.300792 ACCTGAAATTTAAGAAACAGCGGAA 59.699 36.000 3.89 0.00 0.00 4.30
5001 12653 4.825085 ACCTGAAATTTAAGAAACAGCGGA 59.175 37.500 3.89 0.00 0.00 5.54
5002 12654 5.121221 ACCTGAAATTTAAGAAACAGCGG 57.879 39.130 3.89 0.00 0.00 5.52
5003 12655 5.977129 ACAACCTGAAATTTAAGAAACAGCG 59.023 36.000 3.89 0.00 0.00 5.18
5004 12656 7.770801 AACAACCTGAAATTTAAGAAACAGC 57.229 32.000 3.89 0.00 0.00 4.40
5005 12657 8.817100 GGAAACAACCTGAAATTTAAGAAACAG 58.183 33.333 3.89 0.06 0.00 3.16
5006 12658 8.536175 AGGAAACAACCTGAAATTTAAGAAACA 58.464 29.630 3.89 0.00 39.01 2.83
5007 12659 8.942338 AGGAAACAACCTGAAATTTAAGAAAC 57.058 30.769 3.89 0.00 39.01 2.78
5053 12705 2.369394 CCTTCCTTCTCCCCAAATTCG 58.631 52.381 0.00 0.00 0.00 3.34
5065 13135 0.811281 CGAATTGGGTGCCTTCCTTC 59.189 55.000 0.00 0.00 0.00 3.46
5076 13147 1.473258 TCCATGAAAGCCGAATTGGG 58.527 50.000 1.39 1.39 38.63 4.12
5078 13149 4.746729 TGAATTCCATGAAAGCCGAATTG 58.253 39.130 2.27 0.00 35.60 2.32
5110 13181 0.680618 CAATTCCTTGCTTGTGGGCA 59.319 50.000 0.00 0.00 40.74 5.36
5111 13182 0.037046 CCAATTCCTTGCTTGTGGGC 60.037 55.000 0.00 0.00 0.00 5.36
5115 13194 3.575687 CCTTTCTCCAATTCCTTGCTTGT 59.424 43.478 0.00 0.00 0.00 3.16
5128 13207 2.436417 CTTCCGCATTTCCTTTCTCCA 58.564 47.619 0.00 0.00 0.00 3.86
5129 13208 1.745653 CCTTCCGCATTTCCTTTCTCC 59.254 52.381 0.00 0.00 0.00 3.71
5174 13253 5.884232 TGATGCAAGGCTCATATATTCCATC 59.116 40.000 0.00 0.00 0.00 3.51
5200 13280 7.093992 GTGTACTCCATATATGCTTTCCTCTC 58.906 42.308 7.24 0.00 0.00 3.20
5217 13297 2.735762 GCGAGAGACAATGGTGTACTCC 60.736 54.545 7.03 7.03 38.41 3.85
5233 13315 3.119209 TCTCTGAACTACTACTCGCGAGA 60.119 47.826 40.58 22.94 39.12 4.04
5234 13316 3.000523 GTCTCTGAACTACTACTCGCGAG 59.999 52.174 33.45 33.45 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.