Multiple sequence alignment - TraesCS2D01G059700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G059700 chr2D 100.000 2411 0 0 1 2411 24908097 24905687 0.000000e+00 4453.0
1 TraesCS2D01G059700 chr2D 90.139 933 88 1 468 1396 24752898 24751966 0.000000e+00 1210.0
2 TraesCS2D01G059700 chr2D 95.388 477 8 8 2 468 63566570 63566098 0.000000e+00 747.0
3 TraesCS2D01G059700 chr2D 100.000 37 0 0 1335 1371 24906658 24906622 4.300000e-08 69.4
4 TraesCS2D01G059700 chr2D 100.000 37 0 0 1440 1476 24906763 24906727 4.300000e-08 69.4
5 TraesCS2D01G059700 chr2B 89.155 959 104 0 468 1426 39985591 39986549 0.000000e+00 1195.0
6 TraesCS2D01G059700 chr2B 80.170 353 51 14 1831 2168 39987106 39987454 1.850000e-61 246.0
7 TraesCS2D01G059700 chr2B 93.600 125 7 1 2288 2411 778254849 778254973 4.090000e-43 185.0
8 TraesCS2D01G059700 chr2A 88.466 945 107 2 468 1411 27322179 27323122 0.000000e+00 1140.0
9 TraesCS2D01G059700 chr2A 91.310 817 45 4 629 1441 27112270 27113064 0.000000e+00 1092.0
10 TraesCS2D01G059700 chr2A 89.561 843 48 10 1473 2290 27113297 27114124 0.000000e+00 1033.0
11 TraesCS2D01G059700 chr2A 82.073 357 47 11 1473 1827 27323276 27323617 3.030000e-74 289.0
12 TraesCS2D01G059700 chr2A 79.679 374 56 11 1813 2168 27323636 27324007 3.980000e-63 252.0
13 TraesCS2D01G059700 chr2A 100.000 37 0 0 1440 1476 27323046 27323082 4.300000e-08 69.4
14 TraesCS2D01G059700 chr3A 96.239 452 14 3 1 451 24301330 24301779 0.000000e+00 737.0
15 TraesCS2D01G059700 chr6D 96.026 453 12 6 1 451 460396787 460397235 0.000000e+00 732.0
16 TraesCS2D01G059700 chr6D 94.828 464 10 9 1 456 86662635 86662178 0.000000e+00 712.0
17 TraesCS2D01G059700 chr6D 94.595 37 2 0 434 470 39505403 39505439 9.310000e-05 58.4
18 TraesCS2D01G059700 chr7A 95.796 452 15 3 1 451 707972897 707972449 0.000000e+00 726.0
19 TraesCS2D01G059700 chr3D 94.227 485 10 8 1 468 570050319 570049836 0.000000e+00 725.0
20 TraesCS2D01G059700 chr3D 93.895 475 16 4 1 468 565246414 565246882 0.000000e+00 704.0
21 TraesCS2D01G059700 chr1D 95.217 460 9 7 1 451 439008142 439008597 0.000000e+00 715.0
22 TraesCS2D01G059700 chr5D 93.528 479 14 5 1 472 36569879 36570347 0.000000e+00 697.0
23 TraesCS2D01G059700 chr5D 74.819 965 200 28 481 1420 505935473 505934527 1.740000e-106 396.0
24 TraesCS2D01G059700 chr5A 73.963 964 207 24 484 1420 633635671 633634725 1.370000e-92 350.0
25 TraesCS2D01G059700 chr5A 78.743 541 100 9 846 1374 633214199 633214736 4.930000e-92 348.0
26 TraesCS2D01G059700 chr5A 76.806 526 111 6 758 1282 641781168 641780653 3.920000e-73 285.0
27 TraesCS2D01G059700 chr5B 73.368 965 229 16 472 1420 635781742 635782694 1.380000e-87 333.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G059700 chr2D 24905687 24908097 2410 True 1530.6 4453 100.0000 1 2411 3 chr2D.!!$R3 2410
1 TraesCS2D01G059700 chr2D 24751966 24752898 932 True 1210.0 1210 90.1390 468 1396 1 chr2D.!!$R1 928
2 TraesCS2D01G059700 chr2B 39985591 39987454 1863 False 720.5 1195 84.6625 468 2168 2 chr2B.!!$F2 1700
3 TraesCS2D01G059700 chr2A 27112270 27114124 1854 False 1062.5 1092 90.4355 629 2290 2 chr2A.!!$F1 1661
4 TraesCS2D01G059700 chr2A 27322179 27324007 1828 False 437.6 1140 87.5545 468 2168 4 chr2A.!!$F2 1700
5 TraesCS2D01G059700 chr5D 505934527 505935473 946 True 396.0 396 74.8190 481 1420 1 chr5D.!!$R1 939
6 TraesCS2D01G059700 chr5A 633634725 633635671 946 True 350.0 350 73.9630 484 1420 1 chr5A.!!$R1 936
7 TraesCS2D01G059700 chr5A 633214199 633214736 537 False 348.0 348 78.7430 846 1374 1 chr5A.!!$F1 528
8 TraesCS2D01G059700 chr5A 641780653 641781168 515 True 285.0 285 76.8060 758 1282 1 chr5A.!!$R2 524
9 TraesCS2D01G059700 chr5B 635781742 635782694 952 False 333.0 333 73.3680 472 1420 1 chr5B.!!$F1 948

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 144 0.034896 GCAGACTTGGAAACGAGGGA 59.965 55.0 0.0 0.0 46.96 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1452 1500 0.110678 TGAGAGACGGGTCAGTCACT 59.889 55.0 1.17 2.95 43.03 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 8.739972 AGAACAATAGTTTCAAACTCAAACAGT 58.260 29.630 5.92 0.00 41.77 3.55
42 43 8.687824 AACAATAGTTTCAAACTCAAACAGTG 57.312 30.769 5.92 0.88 41.77 3.66
43 44 8.050778 ACAATAGTTTCAAACTCAAACAGTGA 57.949 30.769 5.92 0.00 41.77 3.41
44 45 8.519526 ACAATAGTTTCAAACTCAAACAGTGAA 58.480 29.630 5.92 0.00 41.77 3.18
45 46 9.352784 CAATAGTTTCAAACTCAAACAGTGAAA 57.647 29.630 5.92 0.00 41.77 2.69
47 48 7.816945 AGTTTCAAACTCAAACAGTGAAATG 57.183 32.000 0.00 0.00 37.02 2.32
48 49 7.378181 AGTTTCAAACTCAAACAGTGAAATGT 58.622 30.769 0.00 0.00 37.02 2.71
49 50 7.329226 AGTTTCAAACTCAAACAGTGAAATGTG 59.671 33.333 0.00 0.00 37.02 3.21
50 51 6.266168 TCAAACTCAAACAGTGAAATGTGT 57.734 33.333 0.00 0.00 35.22 3.72
51 52 6.092092 TCAAACTCAAACAGTGAAATGTGTG 58.908 36.000 0.00 0.00 39.39 3.82
52 53 5.895636 AACTCAAACAGTGAAATGTGTGA 57.104 34.783 3.92 3.92 43.58 3.58
53 54 5.235305 ACTCAAACAGTGAAATGTGTGAC 57.765 39.130 0.00 0.00 41.48 3.67
54 55 4.943705 ACTCAAACAGTGAAATGTGTGACT 59.056 37.500 0.00 0.00 41.48 3.41
55 56 5.415701 ACTCAAACAGTGAAATGTGTGACTT 59.584 36.000 0.00 0.00 41.48 3.01
56 57 5.879237 TCAAACAGTGAAATGTGTGACTTC 58.121 37.500 0.00 0.00 41.48 3.01
57 58 5.414144 TCAAACAGTGAAATGTGTGACTTCA 59.586 36.000 0.00 0.00 41.48 3.02
58 59 6.095300 TCAAACAGTGAAATGTGTGACTTCAT 59.905 34.615 0.00 0.00 41.48 2.57
59 60 5.428496 ACAGTGAAATGTGTGACTTCATG 57.572 39.130 0.00 0.00 32.08 3.07
60 61 4.224433 CAGTGAAATGTGTGACTTCATGC 58.776 43.478 0.00 0.00 32.08 4.06
61 62 4.023450 CAGTGAAATGTGTGACTTCATGCT 60.023 41.667 0.00 0.00 32.08 3.79
62 63 4.214971 AGTGAAATGTGTGACTTCATGCTC 59.785 41.667 0.00 0.00 32.08 4.26
63 64 4.023792 GTGAAATGTGTGACTTCATGCTCA 60.024 41.667 0.00 0.00 32.08 4.26
64 65 4.579753 TGAAATGTGTGACTTCATGCTCAA 59.420 37.500 0.00 0.00 0.00 3.02
65 66 4.761235 AATGTGTGACTTCATGCTCAAG 57.239 40.909 0.00 0.00 0.00 3.02
66 67 1.875514 TGTGTGACTTCATGCTCAAGC 59.124 47.619 0.00 0.00 42.50 4.01
67 68 2.149578 GTGTGACTTCATGCTCAAGCT 58.850 47.619 3.32 0.00 42.66 3.74
68 69 3.244181 TGTGTGACTTCATGCTCAAGCTA 60.244 43.478 3.32 0.00 42.66 3.32
69 70 3.748048 GTGTGACTTCATGCTCAAGCTAA 59.252 43.478 3.32 0.00 42.66 3.09
70 71 4.214119 GTGTGACTTCATGCTCAAGCTAAA 59.786 41.667 3.32 0.00 42.66 1.85
71 72 5.005740 TGTGACTTCATGCTCAAGCTAAAT 58.994 37.500 3.32 0.00 42.66 1.40
72 73 5.474532 TGTGACTTCATGCTCAAGCTAAATT 59.525 36.000 3.32 0.00 42.66 1.82
73 74 6.026513 GTGACTTCATGCTCAAGCTAAATTC 58.973 40.000 3.32 0.74 42.66 2.17
74 75 5.124457 TGACTTCATGCTCAAGCTAAATTCC 59.876 40.000 3.32 0.00 42.66 3.01
75 76 5.259632 ACTTCATGCTCAAGCTAAATTCCT 58.740 37.500 3.32 0.00 42.66 3.36
76 77 5.125097 ACTTCATGCTCAAGCTAAATTCCTG 59.875 40.000 3.32 0.00 42.66 3.86
77 78 4.847198 TCATGCTCAAGCTAAATTCCTGA 58.153 39.130 3.32 0.00 42.66 3.86
78 79 4.880120 TCATGCTCAAGCTAAATTCCTGAG 59.120 41.667 3.32 5.18 42.66 3.35
79 80 3.614092 TGCTCAAGCTAAATTCCTGAGG 58.386 45.455 10.50 0.00 42.66 3.86
80 81 2.948315 GCTCAAGCTAAATTCCTGAGGG 59.052 50.000 10.50 0.00 38.21 4.30
81 82 3.623453 GCTCAAGCTAAATTCCTGAGGGT 60.623 47.826 10.50 0.00 38.21 4.34
82 83 4.593956 CTCAAGCTAAATTCCTGAGGGTT 58.406 43.478 0.00 0.00 0.00 4.11
83 84 5.745227 CTCAAGCTAAATTCCTGAGGGTTA 58.255 41.667 0.00 0.00 0.00 2.85
84 85 6.134535 TCAAGCTAAATTCCTGAGGGTTAA 57.865 37.500 0.00 0.00 0.00 2.01
85 86 6.731467 TCAAGCTAAATTCCTGAGGGTTAAT 58.269 36.000 0.00 0.00 0.00 1.40
86 87 7.867921 TCAAGCTAAATTCCTGAGGGTTAATA 58.132 34.615 0.00 0.00 0.00 0.98
87 88 7.993183 TCAAGCTAAATTCCTGAGGGTTAATAG 59.007 37.037 0.00 0.00 0.00 1.73
88 89 6.842676 AGCTAAATTCCTGAGGGTTAATAGG 58.157 40.000 0.00 0.00 0.00 2.57
89 90 6.619852 AGCTAAATTCCTGAGGGTTAATAGGA 59.380 38.462 0.00 0.00 37.55 2.94
90 91 7.295911 AGCTAAATTCCTGAGGGTTAATAGGAT 59.704 37.037 0.00 0.00 38.98 3.24
91 92 7.945109 GCTAAATTCCTGAGGGTTAATAGGATT 59.055 37.037 0.00 0.00 38.98 3.01
92 93 9.289782 CTAAATTCCTGAGGGTTAATAGGATTG 57.710 37.037 0.00 0.00 38.98 2.67
93 94 7.465900 AATTCCTGAGGGTTAATAGGATTGA 57.534 36.000 0.00 0.00 38.98 2.57
94 95 5.888982 TCCTGAGGGTTAATAGGATTGAC 57.111 43.478 0.00 0.00 34.54 3.18
95 96 5.285401 TCCTGAGGGTTAATAGGATTGACA 58.715 41.667 0.00 0.00 34.54 3.58
96 97 5.911178 TCCTGAGGGTTAATAGGATTGACAT 59.089 40.000 0.00 0.00 34.54 3.06
97 98 6.043243 TCCTGAGGGTTAATAGGATTGACATC 59.957 42.308 0.00 0.00 34.54 3.06
98 99 6.043706 CCTGAGGGTTAATAGGATTGACATCT 59.956 42.308 0.00 0.00 31.91 2.90
99 100 7.420680 CCTGAGGGTTAATAGGATTGACATCTT 60.421 40.741 0.00 0.00 31.91 2.40
100 101 8.561536 TGAGGGTTAATAGGATTGACATCTTA 57.438 34.615 0.00 0.00 0.00 2.10
101 102 8.429641 TGAGGGTTAATAGGATTGACATCTTAC 58.570 37.037 0.00 0.00 0.00 2.34
102 103 8.568617 AGGGTTAATAGGATTGACATCTTACT 57.431 34.615 0.00 0.00 0.00 2.24
103 104 9.670442 AGGGTTAATAGGATTGACATCTTACTA 57.330 33.333 0.00 0.00 0.00 1.82
116 117 8.547967 TGACATCTTACTATTGTCAGGAAAAC 57.452 34.615 1.11 0.00 43.44 2.43
117 118 8.154203 TGACATCTTACTATTGTCAGGAAAACA 58.846 33.333 1.11 0.00 43.44 2.83
118 119 8.918202 ACATCTTACTATTGTCAGGAAAACAA 57.082 30.769 0.00 0.00 40.63 2.83
119 120 8.784043 ACATCTTACTATTGTCAGGAAAACAAC 58.216 33.333 0.00 0.00 39.29 3.32
120 121 8.783093 CATCTTACTATTGTCAGGAAAACAACA 58.217 33.333 0.00 0.00 39.29 3.33
121 122 8.918202 TCTTACTATTGTCAGGAAAACAACAT 57.082 30.769 0.00 0.00 39.29 2.71
122 123 8.783093 TCTTACTATTGTCAGGAAAACAACATG 58.217 33.333 0.00 0.00 39.29 3.21
123 124 6.959639 ACTATTGTCAGGAAAACAACATGT 57.040 33.333 0.00 0.00 39.29 3.21
124 125 6.738114 ACTATTGTCAGGAAAACAACATGTG 58.262 36.000 0.00 0.00 39.29 3.21
125 126 3.435105 TGTCAGGAAAACAACATGTGC 57.565 42.857 0.00 0.00 0.00 4.57
126 127 2.757314 TGTCAGGAAAACAACATGTGCA 59.243 40.909 0.00 0.00 0.00 4.57
127 128 3.181488 TGTCAGGAAAACAACATGTGCAG 60.181 43.478 0.00 0.00 0.00 4.41
128 129 3.066621 GTCAGGAAAACAACATGTGCAGA 59.933 43.478 0.00 0.00 0.00 4.26
129 130 3.066621 TCAGGAAAACAACATGTGCAGAC 59.933 43.478 0.00 0.00 0.00 3.51
130 131 3.067180 CAGGAAAACAACATGTGCAGACT 59.933 43.478 0.00 0.00 0.00 3.24
131 132 3.701040 AGGAAAACAACATGTGCAGACTT 59.299 39.130 0.00 0.00 0.00 3.01
132 133 3.798337 GGAAAACAACATGTGCAGACTTG 59.202 43.478 0.00 0.00 34.21 3.16
133 134 3.441496 AAACAACATGTGCAGACTTGG 57.559 42.857 0.00 0.00 32.67 3.61
134 135 2.346766 ACAACATGTGCAGACTTGGA 57.653 45.000 0.00 0.00 32.67 3.53
135 136 2.653726 ACAACATGTGCAGACTTGGAA 58.346 42.857 0.00 0.00 32.67 3.53
136 137 3.023119 ACAACATGTGCAGACTTGGAAA 58.977 40.909 0.00 0.00 32.67 3.13
137 138 3.181487 ACAACATGTGCAGACTTGGAAAC 60.181 43.478 0.00 0.00 32.67 2.78
138 139 1.603802 ACATGTGCAGACTTGGAAACG 59.396 47.619 0.00 0.00 32.67 3.60
139 140 1.872952 CATGTGCAGACTTGGAAACGA 59.127 47.619 0.00 0.00 0.00 3.85
141 142 0.868406 GTGCAGACTTGGAAACGAGG 59.132 55.000 0.00 0.00 46.96 4.63
142 143 0.250295 TGCAGACTTGGAAACGAGGG 60.250 55.000 0.00 0.00 46.96 4.30
143 144 0.034896 GCAGACTTGGAAACGAGGGA 59.965 55.000 0.00 0.00 46.96 4.20
144 145 1.941668 GCAGACTTGGAAACGAGGGAG 60.942 57.143 0.00 0.00 46.96 4.30
145 146 1.618837 CAGACTTGGAAACGAGGGAGA 59.381 52.381 0.00 0.00 46.96 3.71
146 147 2.037251 CAGACTTGGAAACGAGGGAGAA 59.963 50.000 0.00 0.00 46.96 2.87
147 148 2.907042 AGACTTGGAAACGAGGGAGAAT 59.093 45.455 0.00 0.00 46.96 2.40
148 149 4.081642 CAGACTTGGAAACGAGGGAGAATA 60.082 45.833 0.00 0.00 46.96 1.75
149 150 4.160626 AGACTTGGAAACGAGGGAGAATAG 59.839 45.833 0.00 0.00 46.96 1.73
150 151 4.094476 ACTTGGAAACGAGGGAGAATAGA 58.906 43.478 0.00 0.00 46.96 1.98
151 152 4.530946 ACTTGGAAACGAGGGAGAATAGAA 59.469 41.667 0.00 0.00 46.96 2.10
152 153 4.467198 TGGAAACGAGGGAGAATAGAAC 57.533 45.455 0.00 0.00 0.00 3.01
153 154 3.197116 TGGAAACGAGGGAGAATAGAACC 59.803 47.826 0.00 0.00 0.00 3.62
154 155 3.431905 GGAAACGAGGGAGAATAGAACCC 60.432 52.174 0.00 0.00 43.55 4.11
159 160 2.912690 GGGAGAATAGAACCCGGAAG 57.087 55.000 0.73 0.00 34.03 3.46
160 161 2.117051 GGGAGAATAGAACCCGGAAGT 58.883 52.381 0.73 0.00 34.03 3.01
161 162 2.504585 GGGAGAATAGAACCCGGAAGTT 59.495 50.000 0.73 0.00 34.03 2.66
162 163 3.708121 GGGAGAATAGAACCCGGAAGTTA 59.292 47.826 0.73 0.00 34.03 2.24
163 164 4.162888 GGGAGAATAGAACCCGGAAGTTAA 59.837 45.833 0.73 0.00 34.03 2.01
164 165 5.358090 GGAGAATAGAACCCGGAAGTTAAG 58.642 45.833 0.73 0.00 0.00 1.85
165 166 4.767478 AGAATAGAACCCGGAAGTTAAGC 58.233 43.478 0.73 0.00 0.00 3.09
166 167 2.660189 TAGAACCCGGAAGTTAAGCG 57.340 50.000 0.73 0.00 0.00 4.68
167 168 0.683412 AGAACCCGGAAGTTAAGCGT 59.317 50.000 0.73 0.00 0.00 5.07
168 169 1.071228 AGAACCCGGAAGTTAAGCGTT 59.929 47.619 0.73 0.00 0.00 4.84
169 170 1.462283 GAACCCGGAAGTTAAGCGTTC 59.538 52.381 0.73 0.14 0.00 3.95
170 171 0.683412 ACCCGGAAGTTAAGCGTTCT 59.317 50.000 0.73 0.00 0.00 3.01
171 172 1.337541 ACCCGGAAGTTAAGCGTTCTC 60.338 52.381 0.73 0.00 0.00 2.87
172 173 1.337447 CCCGGAAGTTAAGCGTTCTCA 60.337 52.381 0.73 0.00 0.00 3.27
173 174 1.993370 CCGGAAGTTAAGCGTTCTCAG 59.007 52.381 0.00 0.00 0.00 3.35
174 175 1.993370 CGGAAGTTAAGCGTTCTCAGG 59.007 52.381 0.00 0.00 0.00 3.86
175 176 1.732809 GGAAGTTAAGCGTTCTCAGGC 59.267 52.381 0.00 0.00 0.00 4.85
176 177 2.613223 GGAAGTTAAGCGTTCTCAGGCT 60.613 50.000 0.00 0.00 46.32 4.58
177 178 2.086054 AGTTAAGCGTTCTCAGGCTG 57.914 50.000 8.58 8.58 43.50 4.85
178 179 1.079503 GTTAAGCGTTCTCAGGCTGG 58.920 55.000 15.73 5.63 43.50 4.85
179 180 0.973632 TTAAGCGTTCTCAGGCTGGA 59.026 50.000 15.73 8.13 43.50 3.86
180 181 0.532573 TAAGCGTTCTCAGGCTGGAG 59.467 55.000 15.73 10.81 43.50 3.86
181 182 1.476007 AAGCGTTCTCAGGCTGGAGT 61.476 55.000 15.73 0.00 43.50 3.85
182 183 0.612174 AGCGTTCTCAGGCTGGAGTA 60.612 55.000 15.73 2.14 42.66 2.59
183 184 0.179124 GCGTTCTCAGGCTGGAGTAG 60.179 60.000 15.73 4.51 36.30 2.57
184 185 1.178276 CGTTCTCAGGCTGGAGTAGT 58.822 55.000 15.73 0.00 36.30 2.73
185 186 1.135257 CGTTCTCAGGCTGGAGTAGTG 60.135 57.143 15.73 0.00 36.30 2.74
186 187 2.171840 GTTCTCAGGCTGGAGTAGTGA 58.828 52.381 15.73 0.00 36.30 3.41
187 188 2.136298 TCTCAGGCTGGAGTAGTGAG 57.864 55.000 15.73 2.04 36.73 3.51
188 189 1.636003 TCTCAGGCTGGAGTAGTGAGA 59.364 52.381 15.73 4.65 41.01 3.27
189 190 2.023673 CTCAGGCTGGAGTAGTGAGAG 58.976 57.143 15.73 0.00 37.43 3.20
190 191 1.110442 CAGGCTGGAGTAGTGAGAGG 58.890 60.000 6.61 0.00 0.00 3.69
191 192 1.003646 AGGCTGGAGTAGTGAGAGGA 58.996 55.000 0.00 0.00 0.00 3.71
192 193 1.573376 AGGCTGGAGTAGTGAGAGGAT 59.427 52.381 0.00 0.00 0.00 3.24
193 194 1.686052 GGCTGGAGTAGTGAGAGGATG 59.314 57.143 0.00 0.00 0.00 3.51
194 195 1.686052 GCTGGAGTAGTGAGAGGATGG 59.314 57.143 0.00 0.00 0.00 3.51
195 196 2.315176 CTGGAGTAGTGAGAGGATGGG 58.685 57.143 0.00 0.00 0.00 4.00
196 197 1.646447 TGGAGTAGTGAGAGGATGGGT 59.354 52.381 0.00 0.00 0.00 4.51
197 198 2.035632 GGAGTAGTGAGAGGATGGGTG 58.964 57.143 0.00 0.00 0.00 4.61
198 199 2.358300 GGAGTAGTGAGAGGATGGGTGA 60.358 54.545 0.00 0.00 0.00 4.02
199 200 2.691011 GAGTAGTGAGAGGATGGGTGAC 59.309 54.545 0.00 0.00 0.00 3.67
210 211 2.047560 GGGTGACCGTCCGGAAAG 60.048 66.667 5.23 2.31 43.64 2.62
211 212 2.739132 GGTGACCGTCCGGAAAGT 59.261 61.111 5.23 6.51 38.96 2.66
212 213 1.070275 GGTGACCGTCCGGAAAGTT 59.930 57.895 5.23 0.00 38.96 2.66
213 214 0.318120 GGTGACCGTCCGGAAAGTTA 59.682 55.000 5.23 0.00 38.96 2.24
214 215 1.670967 GGTGACCGTCCGGAAAGTTAG 60.671 57.143 5.23 0.00 38.96 2.34
215 216 1.270550 GTGACCGTCCGGAAAGTTAGA 59.729 52.381 5.23 0.00 38.96 2.10
216 217 2.094338 GTGACCGTCCGGAAAGTTAGAT 60.094 50.000 5.23 0.00 38.96 1.98
217 218 2.094390 TGACCGTCCGGAAAGTTAGATG 60.094 50.000 5.23 0.00 38.96 2.90
218 219 2.165030 GACCGTCCGGAAAGTTAGATGA 59.835 50.000 5.23 0.00 38.96 2.92
219 220 2.764572 ACCGTCCGGAAAGTTAGATGAT 59.235 45.455 5.23 0.00 38.96 2.45
220 221 3.197116 ACCGTCCGGAAAGTTAGATGATT 59.803 43.478 5.23 0.00 38.96 2.57
221 222 4.189231 CCGTCCGGAAAGTTAGATGATTT 58.811 43.478 5.23 0.00 37.50 2.17
222 223 4.034048 CCGTCCGGAAAGTTAGATGATTTG 59.966 45.833 5.23 0.00 37.50 2.32
223 224 4.034048 CGTCCGGAAAGTTAGATGATTTGG 59.966 45.833 5.23 0.00 0.00 3.28
224 225 5.183228 GTCCGGAAAGTTAGATGATTTGGA 58.817 41.667 5.23 0.00 0.00 3.53
225 226 5.646360 GTCCGGAAAGTTAGATGATTTGGAA 59.354 40.000 5.23 0.00 0.00 3.53
226 227 6.318900 GTCCGGAAAGTTAGATGATTTGGAAT 59.681 38.462 5.23 0.00 0.00 3.01
227 228 6.318648 TCCGGAAAGTTAGATGATTTGGAATG 59.681 38.462 0.00 0.00 0.00 2.67
228 229 6.318648 CCGGAAAGTTAGATGATTTGGAATGA 59.681 38.462 0.00 0.00 0.00 2.57
229 230 7.013655 CCGGAAAGTTAGATGATTTGGAATGAT 59.986 37.037 0.00 0.00 0.00 2.45
230 231 7.859377 CGGAAAGTTAGATGATTTGGAATGATG 59.141 37.037 0.00 0.00 0.00 3.07
231 232 8.906867 GGAAAGTTAGATGATTTGGAATGATGA 58.093 33.333 0.00 0.00 0.00 2.92
232 233 9.947669 GAAAGTTAGATGATTTGGAATGATGAG 57.052 33.333 0.00 0.00 0.00 2.90
233 234 8.461249 AAGTTAGATGATTTGGAATGATGAGG 57.539 34.615 0.00 0.00 0.00 3.86
234 235 7.002879 AGTTAGATGATTTGGAATGATGAGGG 58.997 38.462 0.00 0.00 0.00 4.30
235 236 4.737578 AGATGATTTGGAATGATGAGGGG 58.262 43.478 0.00 0.00 0.00 4.79
236 237 4.169461 AGATGATTTGGAATGATGAGGGGT 59.831 41.667 0.00 0.00 0.00 4.95
237 238 3.634504 TGATTTGGAATGATGAGGGGTG 58.365 45.455 0.00 0.00 0.00 4.61
238 239 3.269118 TGATTTGGAATGATGAGGGGTGA 59.731 43.478 0.00 0.00 0.00 4.02
239 240 4.079038 TGATTTGGAATGATGAGGGGTGAT 60.079 41.667 0.00 0.00 0.00 3.06
240 241 4.335735 TTTGGAATGATGAGGGGTGATT 57.664 40.909 0.00 0.00 0.00 2.57
241 242 5.464588 TTTGGAATGATGAGGGGTGATTA 57.535 39.130 0.00 0.00 0.00 1.75
242 243 4.712051 TGGAATGATGAGGGGTGATTAG 57.288 45.455 0.00 0.00 0.00 1.73
243 244 4.306391 TGGAATGATGAGGGGTGATTAGA 58.694 43.478 0.00 0.00 0.00 2.10
244 245 4.349048 TGGAATGATGAGGGGTGATTAGAG 59.651 45.833 0.00 0.00 0.00 2.43
245 246 4.594920 GGAATGATGAGGGGTGATTAGAGA 59.405 45.833 0.00 0.00 0.00 3.10
246 247 5.250313 GGAATGATGAGGGGTGATTAGAGAT 59.750 44.000 0.00 0.00 0.00 2.75
247 248 6.240118 GGAATGATGAGGGGTGATTAGAGATT 60.240 42.308 0.00 0.00 0.00 2.40
248 249 7.038017 GGAATGATGAGGGGTGATTAGAGATTA 60.038 40.741 0.00 0.00 0.00 1.75
249 250 6.924913 TGATGAGGGGTGATTAGAGATTAG 57.075 41.667 0.00 0.00 0.00 1.73
250 251 6.624297 TGATGAGGGGTGATTAGAGATTAGA 58.376 40.000 0.00 0.00 0.00 2.10
251 252 6.723515 TGATGAGGGGTGATTAGAGATTAGAG 59.276 42.308 0.00 0.00 0.00 2.43
252 253 5.398236 TGAGGGGTGATTAGAGATTAGAGG 58.602 45.833 0.00 0.00 0.00 3.69
253 254 5.103043 TGAGGGGTGATTAGAGATTAGAGGT 60.103 44.000 0.00 0.00 0.00 3.85
254 255 5.793967 AGGGGTGATTAGAGATTAGAGGTT 58.206 41.667 0.00 0.00 0.00 3.50
255 256 6.935036 AGGGGTGATTAGAGATTAGAGGTTA 58.065 40.000 0.00 0.00 0.00 2.85
256 257 7.371043 AGGGGTGATTAGAGATTAGAGGTTAA 58.629 38.462 0.00 0.00 0.00 2.01
257 258 7.849904 AGGGGTGATTAGAGATTAGAGGTTAAA 59.150 37.037 0.00 0.00 0.00 1.52
258 259 8.661345 GGGGTGATTAGAGATTAGAGGTTAAAT 58.339 37.037 0.00 0.00 0.00 1.40
265 266 9.823647 TTAGAGATTAGAGGTTAAATTGAGCAG 57.176 33.333 0.00 0.00 0.00 4.24
266 267 7.856415 AGAGATTAGAGGTTAAATTGAGCAGT 58.144 34.615 0.00 0.00 0.00 4.40
267 268 7.768120 AGAGATTAGAGGTTAAATTGAGCAGTG 59.232 37.037 0.00 0.00 0.00 3.66
268 269 7.624549 AGATTAGAGGTTAAATTGAGCAGTGA 58.375 34.615 0.00 0.00 0.00 3.41
269 270 8.270744 AGATTAGAGGTTAAATTGAGCAGTGAT 58.729 33.333 0.00 0.00 0.00 3.06
270 271 7.615582 TTAGAGGTTAAATTGAGCAGTGATG 57.384 36.000 0.00 0.00 0.00 3.07
271 272 5.809001 AGAGGTTAAATTGAGCAGTGATGA 58.191 37.500 0.00 0.00 0.00 2.92
272 273 5.879223 AGAGGTTAAATTGAGCAGTGATGAG 59.121 40.000 0.00 0.00 0.00 2.90
273 274 4.946157 AGGTTAAATTGAGCAGTGATGAGG 59.054 41.667 0.00 0.00 0.00 3.86
274 275 4.096984 GGTTAAATTGAGCAGTGATGAGGG 59.903 45.833 0.00 0.00 0.00 4.30
275 276 2.431954 AATTGAGCAGTGATGAGGGG 57.568 50.000 0.00 0.00 0.00 4.79
276 277 1.293062 ATTGAGCAGTGATGAGGGGT 58.707 50.000 0.00 0.00 0.00 4.95
277 278 0.325933 TTGAGCAGTGATGAGGGGTG 59.674 55.000 0.00 0.00 0.00 4.61
278 279 0.545071 TGAGCAGTGATGAGGGGTGA 60.545 55.000 0.00 0.00 0.00 4.02
279 280 0.835941 GAGCAGTGATGAGGGGTGAT 59.164 55.000 0.00 0.00 0.00 3.06
280 281 1.211457 GAGCAGTGATGAGGGGTGATT 59.789 52.381 0.00 0.00 0.00 2.57
281 282 2.435805 GAGCAGTGATGAGGGGTGATTA 59.564 50.000 0.00 0.00 0.00 1.75
282 283 2.437281 AGCAGTGATGAGGGGTGATTAG 59.563 50.000 0.00 0.00 0.00 1.73
283 284 2.435805 GCAGTGATGAGGGGTGATTAGA 59.564 50.000 0.00 0.00 0.00 2.10
284 285 3.494048 GCAGTGATGAGGGGTGATTAGAG 60.494 52.174 0.00 0.00 0.00 2.43
285 286 3.070734 CAGTGATGAGGGGTGATTAGAGG 59.929 52.174 0.00 0.00 0.00 3.69
286 287 3.041946 GTGATGAGGGGTGATTAGAGGT 58.958 50.000 0.00 0.00 0.00 3.85
287 288 3.456277 GTGATGAGGGGTGATTAGAGGTT 59.544 47.826 0.00 0.00 0.00 3.50
288 289 4.654262 GTGATGAGGGGTGATTAGAGGTTA 59.346 45.833 0.00 0.00 0.00 2.85
289 290 5.130477 GTGATGAGGGGTGATTAGAGGTTAA 59.870 44.000 0.00 0.00 0.00 2.01
290 291 5.729229 TGATGAGGGGTGATTAGAGGTTAAA 59.271 40.000 0.00 0.00 0.00 1.52
291 292 6.216662 TGATGAGGGGTGATTAGAGGTTAAAA 59.783 38.462 0.00 0.00 0.00 1.52
292 293 6.652205 TGAGGGGTGATTAGAGGTTAAAAT 57.348 37.500 0.00 0.00 0.00 1.82
293 294 7.758820 TGAGGGGTGATTAGAGGTTAAAATA 57.241 36.000 0.00 0.00 0.00 1.40
294 295 8.165267 TGAGGGGTGATTAGAGGTTAAAATAA 57.835 34.615 0.00 0.00 0.00 1.40
295 296 8.787818 TGAGGGGTGATTAGAGGTTAAAATAAT 58.212 33.333 0.00 0.00 0.00 1.28
296 297 9.642343 GAGGGGTGATTAGAGGTTAAAATAATT 57.358 33.333 0.00 0.00 0.00 1.40
297 298 9.642343 AGGGGTGATTAGAGGTTAAAATAATTC 57.358 33.333 0.00 0.00 0.00 2.17
298 299 9.416284 GGGGTGATTAGAGGTTAAAATAATTCA 57.584 33.333 0.00 0.00 0.00 2.57
357 358 9.470399 AATCATAAAATTTCCTTTAGTACCGGT 57.530 29.630 13.98 13.98 0.00 5.28
358 359 8.866970 TCATAAAATTTCCTTTAGTACCGGTT 57.133 30.769 15.04 0.00 0.00 4.44
359 360 8.732531 TCATAAAATTTCCTTTAGTACCGGTTG 58.267 33.333 15.04 0.00 0.00 3.77
360 361 5.970317 AAATTTCCTTTAGTACCGGTTGG 57.030 39.130 15.04 6.26 42.84 3.77
375 376 2.188062 GTTGGTGTTATCAACCGGGA 57.812 50.000 6.32 0.00 38.71 5.14
376 377 1.808343 GTTGGTGTTATCAACCGGGAC 59.192 52.381 6.32 0.00 38.71 4.46
377 378 1.354101 TGGTGTTATCAACCGGGACT 58.646 50.000 6.32 0.00 0.00 3.85
378 379 2.538222 TGGTGTTATCAACCGGGACTA 58.462 47.619 6.32 0.00 0.00 2.59
379 380 2.905085 TGGTGTTATCAACCGGGACTAA 59.095 45.455 6.32 0.00 0.00 2.24
380 381 3.327172 TGGTGTTATCAACCGGGACTAAA 59.673 43.478 6.32 0.00 0.00 1.85
381 382 3.937079 GGTGTTATCAACCGGGACTAAAG 59.063 47.826 6.32 0.00 0.00 1.85
382 383 3.937079 GTGTTATCAACCGGGACTAAAGG 59.063 47.826 6.32 0.00 0.00 3.11
383 384 3.583966 TGTTATCAACCGGGACTAAAGGT 59.416 43.478 6.32 0.00 40.50 3.50
384 385 2.781681 ATCAACCGGGACTAAAGGTG 57.218 50.000 6.32 0.00 38.44 4.00
385 386 0.688487 TCAACCGGGACTAAAGGTGG 59.312 55.000 6.32 0.00 38.44 4.61
386 387 0.688487 CAACCGGGACTAAAGGTGGA 59.312 55.000 6.32 0.00 38.44 4.02
387 388 0.689055 AACCGGGACTAAAGGTGGAC 59.311 55.000 6.32 0.00 38.44 4.02
388 389 1.196766 ACCGGGACTAAAGGTGGACC 61.197 60.000 6.32 0.00 36.81 4.46
417 418 4.660938 GCCACGTGGAGGGCCTTT 62.661 66.667 38.30 0.00 44.53 3.11
418 419 3.074281 CCACGTGGAGGGCCTTTA 58.926 61.111 31.31 0.00 37.39 1.85
419 420 1.078426 CCACGTGGAGGGCCTTTAG 60.078 63.158 31.31 2.32 37.39 1.85
420 421 1.677552 CACGTGGAGGGCCTTTAGT 59.322 57.895 7.89 3.03 34.31 2.24
421 422 0.391263 CACGTGGAGGGCCTTTAGTC 60.391 60.000 7.89 0.00 34.31 2.59
422 423 1.221021 CGTGGAGGGCCTTTAGTCC 59.779 63.158 7.89 4.32 34.31 3.85
423 424 1.608154 GTGGAGGGCCTTTAGTCCC 59.392 63.158 7.89 3.10 42.94 4.46
427 428 3.084304 GGGCCTTTAGTCCCGGTT 58.916 61.111 0.84 0.00 32.00 4.44
428 429 1.077930 GGGCCTTTAGTCCCGGTTC 60.078 63.158 0.84 0.00 32.00 3.62
429 430 1.559965 GGGCCTTTAGTCCCGGTTCT 61.560 60.000 0.84 0.15 32.00 3.01
430 431 0.327259 GGCCTTTAGTCCCGGTTCTT 59.673 55.000 0.00 0.00 0.00 2.52
431 432 1.556451 GGCCTTTAGTCCCGGTTCTTA 59.444 52.381 0.00 0.00 0.00 2.10
432 433 2.625737 GCCTTTAGTCCCGGTTCTTAC 58.374 52.381 0.00 0.00 0.00 2.34
433 434 2.027837 GCCTTTAGTCCCGGTTCTTACA 60.028 50.000 0.00 0.00 0.00 2.41
434 435 3.370209 GCCTTTAGTCCCGGTTCTTACAT 60.370 47.826 0.00 0.00 0.00 2.29
435 436 4.189231 CCTTTAGTCCCGGTTCTTACATG 58.811 47.826 0.00 0.00 0.00 3.21
436 437 4.081309 CCTTTAGTCCCGGTTCTTACATGA 60.081 45.833 0.00 0.00 0.00 3.07
437 438 5.484715 CTTTAGTCCCGGTTCTTACATGAA 58.515 41.667 0.00 0.00 0.00 2.57
438 439 3.329929 AGTCCCGGTTCTTACATGAAC 57.670 47.619 0.00 0.00 43.88 3.18
450 451 7.807680 GTTCTTACATGAACCAAGACTAAAGG 58.192 38.462 0.00 0.00 40.10 3.11
451 452 7.074653 TCTTACATGAACCAAGACTAAAGGT 57.925 36.000 0.00 0.00 37.20 3.50
452 453 7.159372 TCTTACATGAACCAAGACTAAAGGTC 58.841 38.462 0.00 0.00 44.80 3.85
453 454 4.652822 ACATGAACCAAGACTAAAGGTCC 58.347 43.478 0.00 0.00 45.54 4.46
454 455 4.351111 ACATGAACCAAGACTAAAGGTCCT 59.649 41.667 0.00 0.00 45.54 3.85
455 456 5.163088 ACATGAACCAAGACTAAAGGTCCTT 60.163 40.000 0.00 0.00 45.54 3.36
456 457 5.382664 TGAACCAAGACTAAAGGTCCTTT 57.617 39.130 20.59 20.59 45.54 3.11
457 458 5.762279 TGAACCAAGACTAAAGGTCCTTTT 58.238 37.500 21.88 5.18 45.54 2.27
458 459 6.192044 TGAACCAAGACTAAAGGTCCTTTTT 58.808 36.000 21.88 9.77 45.54 1.94
459 460 6.320418 TGAACCAAGACTAAAGGTCCTTTTTC 59.680 38.462 21.88 17.28 45.54 2.29
460 461 6.014771 ACCAAGACTAAAGGTCCTTTTTCT 57.985 37.500 21.88 19.01 45.54 2.52
461 462 7.145474 ACCAAGACTAAAGGTCCTTTTTCTA 57.855 36.000 21.88 3.35 45.54 2.10
462 463 6.996879 ACCAAGACTAAAGGTCCTTTTTCTAC 59.003 38.462 21.88 9.61 45.54 2.59
463 464 7.147355 ACCAAGACTAAAGGTCCTTTTTCTACT 60.147 37.037 21.88 11.44 45.54 2.57
464 465 8.373220 CCAAGACTAAAGGTCCTTTTTCTACTA 58.627 37.037 21.88 1.52 45.54 1.82
465 466 9.425577 CAAGACTAAAGGTCCTTTTTCTACTAG 57.574 37.037 21.88 13.23 45.54 2.57
466 467 8.724113 AGACTAAAGGTCCTTTTTCTACTAGT 57.276 34.615 21.88 16.16 45.54 2.57
479 480 5.557891 TTCTACTAGTGTACTTTCTCCGC 57.442 43.478 5.39 0.00 0.00 5.54
531 532 1.291877 CGGACGGGTTCAGCAAAGAG 61.292 60.000 0.00 0.00 0.00 2.85
532 533 0.955919 GGACGGGTTCAGCAAAGAGG 60.956 60.000 0.00 0.00 0.00 3.69
533 534 0.250338 GACGGGTTCAGCAAAGAGGT 60.250 55.000 0.00 0.00 0.00 3.85
534 535 0.535102 ACGGGTTCAGCAAAGAGGTG 60.535 55.000 0.00 0.00 46.98 4.00
548 549 1.625818 AGAGGTGCTCGACAAGGATTT 59.374 47.619 0.00 0.00 35.36 2.17
553 554 3.002791 GTGCTCGACAAGGATTTCATCA 58.997 45.455 0.00 0.00 0.00 3.07
616 621 2.678190 GCATCCTGTGACCTGAGGTTAC 60.678 54.545 18.63 18.63 41.70 2.50
661 666 0.464036 TTCGGTGCACAAGACAGAGT 59.536 50.000 20.43 0.00 0.00 3.24
686 691 1.672356 CCTTCAACCCAGCTGACGG 60.672 63.158 17.39 11.70 0.00 4.79
767 775 2.009774 CCTTTTGAACGATCGCCTCAT 58.990 47.619 16.60 0.00 0.00 2.90
894 905 1.541588 GGCAAGCTTTTGGAAGACGAT 59.458 47.619 0.00 0.00 34.71 3.73
1050 1068 1.895131 ACCATCAAAGACATGCAACCC 59.105 47.619 0.00 0.00 0.00 4.11
1080 1098 1.212935 AGCGCCCTACTCCATTTCATT 59.787 47.619 2.29 0.00 0.00 2.57
1086 1104 5.995282 CGCCCTACTCCATTTCATTTATACA 59.005 40.000 0.00 0.00 0.00 2.29
1441 1489 9.770097 CTCATCATCATCATCATCATCATCATA 57.230 33.333 0.00 0.00 0.00 2.15
1457 1505 9.322773 TCATCATCATAAGAATCTCAAAGTGAC 57.677 33.333 0.00 0.00 0.00 3.67
1459 1507 8.713737 TCATCATAAGAATCTCAAAGTGACTG 57.286 34.615 0.00 0.00 0.00 3.51
1461 1509 8.602328 CATCATAAGAATCTCAAAGTGACTGAC 58.398 37.037 0.00 0.00 0.00 3.51
1462 1510 7.099764 TCATAAGAATCTCAAAGTGACTGACC 58.900 38.462 0.00 0.00 0.00 4.02
1463 1511 4.278975 AGAATCTCAAAGTGACTGACCC 57.721 45.455 0.00 0.00 0.00 4.46
1464 1512 2.751166 ATCTCAAAGTGACTGACCCG 57.249 50.000 0.00 0.00 0.00 5.28
1466 1514 1.340248 TCTCAAAGTGACTGACCCGTC 59.660 52.381 0.00 0.00 34.52 4.79
1467 1515 1.341531 CTCAAAGTGACTGACCCGTCT 59.658 52.381 0.00 0.00 35.00 4.18
1468 1516 1.340248 TCAAAGTGACTGACCCGTCTC 59.660 52.381 0.00 0.00 35.00 3.36
1470 1518 1.249407 AAGTGACTGACCCGTCTCTC 58.751 55.000 0.00 0.00 36.91 3.20
1471 1519 0.110678 AGTGACTGACCCGTCTCTCA 59.889 55.000 0.00 0.00 33.80 3.27
1507 1757 7.048629 TGAAGTTTGATTTATCAGGTTGCAA 57.951 32.000 0.00 0.00 38.19 4.08
1547 1797 3.056536 TCGGATGAATATACAGGCTGAGC 60.057 47.826 23.66 0.00 0.00 4.26
1550 1800 1.688735 TGAATATACAGGCTGAGCGCT 59.311 47.619 23.66 11.27 39.13 5.92
1551 1801 2.103094 TGAATATACAGGCTGAGCGCTT 59.897 45.455 23.66 7.60 39.13 4.68
1597 1849 7.928908 TTTCACTGCATCAAAATTAGTGTTC 57.071 32.000 0.00 0.00 39.66 3.18
1611 1863 8.807667 AAATTAGTGTTCATCTTCAGCAAAAG 57.192 30.769 0.00 0.00 0.00 2.27
1642 1894 4.394300 CCTTCTGTGCACTCTTTATTGAGG 59.606 45.833 19.41 8.24 38.32 3.86
1738 2001 5.050091 CACAACAATCTCGTGCTACTCTTTT 60.050 40.000 0.00 0.00 0.00 2.27
1794 2059 2.161410 TGTCACAGTGCTTGTTGTGTTC 59.839 45.455 0.00 1.62 43.87 3.18
1797 2062 1.102154 CAGTGCTTGTTGTGTTCCCA 58.898 50.000 0.00 0.00 0.00 4.37
1807 2072 6.073819 GCTTGTTGTGTTCCCATGAAAATTAC 60.074 38.462 0.00 0.00 30.79 1.89
1876 2180 7.792925 TGTTATGAGTGTATCGTTGAACAAAG 58.207 34.615 0.00 0.00 0.00 2.77
1879 2183 4.572795 TGAGTGTATCGTTGAACAAAGCAA 59.427 37.500 0.00 0.00 0.00 3.91
1881 2185 5.451908 AGTGTATCGTTGAACAAAGCAATG 58.548 37.500 0.00 0.00 34.40 2.82
1882 2186 5.008613 AGTGTATCGTTGAACAAAGCAATGT 59.991 36.000 0.00 0.00 34.65 2.71
1934 2238 9.438228 AAAAGCTAGTCAGAGGTCTAAATTAAC 57.562 33.333 0.00 0.00 0.00 2.01
1940 2244 6.210984 AGTCAGAGGTCTAAATTAACGAACCT 59.789 38.462 0.00 0.00 0.00 3.50
1972 2276 4.572985 TTGTGCAGTGAATCCTTTTCTG 57.427 40.909 0.00 0.00 0.00 3.02
2035 2339 3.850122 TCGTCCTGTTCATAGACAGTG 57.150 47.619 4.54 0.00 44.34 3.66
2087 2404 4.260375 CGTGATATTTGCTTGCCTACACTC 60.260 45.833 0.00 0.00 0.00 3.51
2096 2413 3.868077 GCTTGCCTACACTCTGAATGTAG 59.132 47.826 17.01 17.01 46.11 2.74
2099 2416 3.131223 TGCCTACACTCTGAATGTAGCTC 59.869 47.826 18.20 12.91 45.49 4.09
2101 2418 2.285827 ACACTCTGAATGTAGCTCGC 57.714 50.000 0.00 0.00 0.00 5.03
2151 2468 6.015095 TGTTTTGCCATGGTCATACATAACAA 60.015 34.615 14.67 1.72 31.67 2.83
2209 2526 6.010219 ACCTCATAATTATTTGATTCCCCCG 58.990 40.000 0.00 0.00 0.00 5.73
2211 2528 6.071952 CCTCATAATTATTTGATTCCCCCGTG 60.072 42.308 0.00 0.00 0.00 4.94
2222 2539 1.302913 CCCCCGTGCACACATACAA 60.303 57.895 18.64 0.00 0.00 2.41
2233 2555 3.058914 GCACACATACAAACACAGTCTCC 60.059 47.826 0.00 0.00 0.00 3.71
2250 2572 6.209391 ACAGTCTCCCTTTGGAACATAAATTG 59.791 38.462 0.00 0.00 41.17 2.32
2263 2585 5.789643 ACATAAATTGAACCTGTTGCACT 57.210 34.783 0.00 0.00 0.00 4.40
2269 2591 0.663153 GAACCTGTTGCACTCACACC 59.337 55.000 0.00 0.00 0.00 4.16
2270 2592 0.034574 AACCTGTTGCACTCACACCA 60.035 50.000 0.00 0.00 0.00 4.17
2290 2612 8.921670 CACACCAATAAAGGCAATTTACTAAAC 58.078 33.333 0.00 0.00 36.20 2.01
2291 2613 8.866093 ACACCAATAAAGGCAATTTACTAAACT 58.134 29.630 0.00 0.00 36.20 2.66
2301 2623 9.780186 AGGCAATTTACTAAACTAGATGATACC 57.220 33.333 0.00 0.00 0.00 2.73
2302 2624 9.780186 GGCAATTTACTAAACTAGATGATACCT 57.220 33.333 0.00 0.00 0.00 3.08
2307 2629 6.074544 ACTAAACTAGATGATACCTCACGC 57.925 41.667 0.00 0.00 33.22 5.34
2308 2630 3.627732 AACTAGATGATACCTCACGCG 57.372 47.619 3.53 3.53 33.22 6.01
2309 2631 1.880675 ACTAGATGATACCTCACGCGG 59.119 52.381 12.47 0.00 33.22 6.46
2310 2632 1.880675 CTAGATGATACCTCACGCGGT 59.119 52.381 12.47 0.00 41.10 5.68
2311 2633 0.385751 AGATGATACCTCACGCGGTG 59.614 55.000 12.47 6.71 37.93 4.94
2312 2634 1.215655 GATGATACCTCACGCGGTGC 61.216 60.000 12.47 0.00 37.93 5.01
2313 2635 1.676678 ATGATACCTCACGCGGTGCT 61.677 55.000 12.47 0.00 37.93 4.40
2314 2636 1.878522 GATACCTCACGCGGTGCTG 60.879 63.158 12.47 0.00 37.93 4.41
2315 2637 4.735132 TACCTCACGCGGTGCTGC 62.735 66.667 12.47 0.00 37.93 5.25
2323 2645 2.591715 GCGGTGCTGCGGGATATT 60.592 61.111 0.00 0.00 0.00 1.28
2324 2646 1.301401 GCGGTGCTGCGGGATATTA 60.301 57.895 0.00 0.00 0.00 0.98
2325 2647 1.291877 GCGGTGCTGCGGGATATTAG 61.292 60.000 0.00 0.00 0.00 1.73
2326 2648 0.033504 CGGTGCTGCGGGATATTAGT 59.966 55.000 0.00 0.00 0.00 2.24
2327 2649 1.512926 GGTGCTGCGGGATATTAGTG 58.487 55.000 0.00 0.00 0.00 2.74
2328 2650 1.202651 GGTGCTGCGGGATATTAGTGT 60.203 52.381 0.00 0.00 0.00 3.55
2329 2651 1.867233 GTGCTGCGGGATATTAGTGTG 59.133 52.381 0.00 0.00 0.00 3.82
2330 2652 0.868406 GCTGCGGGATATTAGTGTGC 59.132 55.000 0.00 0.00 0.00 4.57
2331 2653 1.810031 GCTGCGGGATATTAGTGTGCA 60.810 52.381 0.00 0.00 0.00 4.57
2332 2654 2.560504 CTGCGGGATATTAGTGTGCAA 58.439 47.619 0.00 0.00 0.00 4.08
2333 2655 3.141398 CTGCGGGATATTAGTGTGCAAT 58.859 45.455 0.00 0.00 0.00 3.56
2334 2656 4.314961 CTGCGGGATATTAGTGTGCAATA 58.685 43.478 0.00 0.00 0.00 1.90
2335 2657 4.062293 TGCGGGATATTAGTGTGCAATAC 58.938 43.478 0.00 0.00 0.00 1.89
2336 2658 3.435671 GCGGGATATTAGTGTGCAATACC 59.564 47.826 0.00 0.00 0.00 2.73
2337 2659 3.678072 CGGGATATTAGTGTGCAATACCG 59.322 47.826 1.72 1.72 0.00 4.02
2338 2660 4.638304 GGGATATTAGTGTGCAATACCGT 58.362 43.478 0.00 0.00 0.00 4.83
2339 2661 4.451096 GGGATATTAGTGTGCAATACCGTG 59.549 45.833 0.00 0.00 0.00 4.94
2340 2662 5.294356 GGATATTAGTGTGCAATACCGTGA 58.706 41.667 0.00 0.00 0.00 4.35
2341 2663 5.756347 GGATATTAGTGTGCAATACCGTGAA 59.244 40.000 0.00 0.00 0.00 3.18
2342 2664 6.426937 GGATATTAGTGTGCAATACCGTGAAT 59.573 38.462 0.00 0.00 0.00 2.57
2343 2665 7.601130 GGATATTAGTGTGCAATACCGTGAATA 59.399 37.037 0.00 0.00 0.00 1.75
2344 2666 9.151471 GATATTAGTGTGCAATACCGTGAATAT 57.849 33.333 0.00 0.00 0.00 1.28
2345 2667 7.801716 ATTAGTGTGCAATACCGTGAATATT 57.198 32.000 0.00 0.00 0.00 1.28
2346 2668 5.734855 AGTGTGCAATACCGTGAATATTC 57.265 39.130 8.60 8.60 0.00 1.75
2347 2669 5.182487 AGTGTGCAATACCGTGAATATTCA 58.818 37.500 14.23 14.23 34.20 2.57
2348 2670 5.822519 AGTGTGCAATACCGTGAATATTCAT 59.177 36.000 20.65 8.21 39.73 2.57
2349 2671 5.909054 GTGTGCAATACCGTGAATATTCATG 59.091 40.000 24.90 24.90 42.45 3.07
2350 2672 5.819901 TGTGCAATACCGTGAATATTCATGA 59.180 36.000 30.79 17.24 44.92 3.07
2351 2673 6.018016 TGTGCAATACCGTGAATATTCATGAG 60.018 38.462 30.79 23.55 44.92 2.90
2352 2674 5.469760 TGCAATACCGTGAATATTCATGAGG 59.530 40.000 30.79 27.06 44.92 3.86
2353 2675 5.470098 GCAATACCGTGAATATTCATGAGGT 59.530 40.000 30.79 29.91 44.92 3.85
2354 2676 6.649141 GCAATACCGTGAATATTCATGAGGTA 59.351 38.462 30.62 30.62 44.92 3.08
2355 2677 7.172532 GCAATACCGTGAATATTCATGAGGTAA 59.827 37.037 31.35 22.63 44.92 2.85
2356 2678 9.051679 CAATACCGTGAATATTCATGAGGTAAA 57.948 33.333 31.35 22.23 44.92 2.01
2357 2679 9.793259 AATACCGTGAATATTCATGAGGTAAAT 57.207 29.630 31.35 25.18 44.92 1.40
2358 2680 9.793259 ATACCGTGAATATTCATGAGGTAAATT 57.207 29.630 31.35 21.93 44.92 1.82
2359 2681 8.154649 ACCGTGAATATTCATGAGGTAAATTC 57.845 34.615 30.79 10.62 44.92 2.17
2360 2682 7.993183 ACCGTGAATATTCATGAGGTAAATTCT 59.007 33.333 30.79 11.75 44.92 2.40
2361 2683 8.840321 CCGTGAATATTCATGAGGTAAATTCTT 58.160 33.333 30.79 0.00 44.92 2.52
2362 2684 9.655769 CGTGAATATTCATGAGGTAAATTCTTG 57.344 33.333 26.90 0.00 44.92 3.02
2363 2685 9.956720 GTGAATATTCATGAGGTAAATTCTTGG 57.043 33.333 20.65 0.00 39.73 3.61
2364 2686 9.919416 TGAATATTCATGAGGTAAATTCTTGGA 57.081 29.630 14.23 0.00 31.01 3.53
2367 2689 7.592885 ATTCATGAGGTAAATTCTTGGATGG 57.407 36.000 0.00 0.00 0.00 3.51
2368 2690 6.078456 TCATGAGGTAAATTCTTGGATGGT 57.922 37.500 0.00 0.00 0.00 3.55
2369 2691 5.887598 TCATGAGGTAAATTCTTGGATGGTG 59.112 40.000 0.00 0.00 0.00 4.17
2370 2692 4.599041 TGAGGTAAATTCTTGGATGGTGG 58.401 43.478 0.00 0.00 0.00 4.61
2371 2693 4.290985 TGAGGTAAATTCTTGGATGGTGGA 59.709 41.667 0.00 0.00 0.00 4.02
2372 2694 5.044179 TGAGGTAAATTCTTGGATGGTGGAT 60.044 40.000 0.00 0.00 0.00 3.41
2373 2695 6.159575 TGAGGTAAATTCTTGGATGGTGGATA 59.840 38.462 0.00 0.00 0.00 2.59
2374 2696 6.980577 AGGTAAATTCTTGGATGGTGGATAA 58.019 36.000 0.00 0.00 0.00 1.75
2375 2697 7.062957 AGGTAAATTCTTGGATGGTGGATAAG 58.937 38.462 0.00 0.00 0.00 1.73
2376 2698 7.060421 GGTAAATTCTTGGATGGTGGATAAGA 58.940 38.462 0.00 0.00 0.00 2.10
2377 2699 7.229506 GGTAAATTCTTGGATGGTGGATAAGAG 59.770 40.741 0.00 0.00 0.00 2.85
2378 2700 6.581388 AATTCTTGGATGGTGGATAAGAGA 57.419 37.500 0.00 0.00 0.00 3.10
2379 2701 6.776887 ATTCTTGGATGGTGGATAAGAGAT 57.223 37.500 0.00 0.00 0.00 2.75
2380 2702 7.878621 ATTCTTGGATGGTGGATAAGAGATA 57.121 36.000 0.00 0.00 0.00 1.98
2381 2703 7.690454 TTCTTGGATGGTGGATAAGAGATAA 57.310 36.000 0.00 0.00 0.00 1.75
2382 2704 7.690454 TCTTGGATGGTGGATAAGAGATAAA 57.310 36.000 0.00 0.00 0.00 1.40
2383 2705 8.101309 TCTTGGATGGTGGATAAGAGATAAAA 57.899 34.615 0.00 0.00 0.00 1.52
2384 2706 8.556589 TCTTGGATGGTGGATAAGAGATAAAAA 58.443 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 8.739972 ACTGTTTGAGTTTGAAACTATTGTTCT 58.260 29.630 11.01 0.00 43.03 3.01
16 17 8.798153 CACTGTTTGAGTTTGAAACTATTGTTC 58.202 33.333 11.01 0.00 43.03 3.18
17 18 8.519526 TCACTGTTTGAGTTTGAAACTATTGTT 58.480 29.630 11.01 0.00 43.03 2.83
18 19 8.050778 TCACTGTTTGAGTTTGAAACTATTGT 57.949 30.769 11.01 2.32 43.03 2.71
19 20 8.909708 TTCACTGTTTGAGTTTGAAACTATTG 57.090 30.769 11.01 0.13 43.03 1.90
21 22 9.520204 CATTTCACTGTTTGAGTTTGAAACTAT 57.480 29.630 11.01 0.00 43.03 2.12
22 23 8.519526 ACATTTCACTGTTTGAGTTTGAAACTA 58.480 29.630 11.01 0.00 43.03 2.24
23 24 7.329226 CACATTTCACTGTTTGAGTTTGAAACT 59.671 33.333 10.82 10.82 46.38 2.66
24 25 7.116233 ACACATTTCACTGTTTGAGTTTGAAAC 59.884 33.333 0.00 0.00 32.33 2.78
25 26 7.116090 CACACATTTCACTGTTTGAGTTTGAAA 59.884 33.333 0.00 0.00 34.94 2.69
26 27 6.585702 CACACATTTCACTGTTTGAGTTTGAA 59.414 34.615 0.00 0.00 34.94 2.69
27 28 6.072230 TCACACATTTCACTGTTTGAGTTTGA 60.072 34.615 0.00 0.00 32.43 2.69
28 29 6.033831 GTCACACATTTCACTGTTTGAGTTTG 59.966 38.462 0.00 0.00 36.72 2.93
29 30 6.071952 AGTCACACATTTCACTGTTTGAGTTT 60.072 34.615 0.00 0.00 36.54 2.66
30 31 5.415701 AGTCACACATTTCACTGTTTGAGTT 59.584 36.000 0.00 0.00 36.54 3.01
31 32 4.943705 AGTCACACATTTCACTGTTTGAGT 59.056 37.500 0.00 0.00 36.72 3.41
32 33 5.490139 AGTCACACATTTCACTGTTTGAG 57.510 39.130 0.00 0.00 36.72 3.02
33 34 5.414144 TGAAGTCACACATTTCACTGTTTGA 59.586 36.000 0.00 0.00 34.39 2.69
34 35 5.639757 TGAAGTCACACATTTCACTGTTTG 58.360 37.500 0.00 0.00 0.00 2.93
35 36 5.895636 TGAAGTCACACATTTCACTGTTT 57.104 34.783 0.00 0.00 0.00 2.83
36 37 5.734220 GCATGAAGTCACACATTTCACTGTT 60.734 40.000 0.00 0.00 34.04 3.16
37 38 4.261322 GCATGAAGTCACACATTTCACTGT 60.261 41.667 0.00 0.00 34.04 3.55
38 39 4.023450 AGCATGAAGTCACACATTTCACTG 60.023 41.667 0.00 0.00 34.04 3.66
39 40 4.139786 AGCATGAAGTCACACATTTCACT 58.860 39.130 0.00 0.00 34.04 3.41
40 41 4.023792 TGAGCATGAAGTCACACATTTCAC 60.024 41.667 0.00 0.00 34.04 3.18
41 42 4.136051 TGAGCATGAAGTCACACATTTCA 58.864 39.130 0.00 0.00 35.52 2.69
42 43 4.754372 TGAGCATGAAGTCACACATTTC 57.246 40.909 0.00 0.00 0.00 2.17
43 44 4.558095 GCTTGAGCATGAAGTCACACATTT 60.558 41.667 0.00 0.00 41.59 2.32
44 45 3.057736 GCTTGAGCATGAAGTCACACATT 60.058 43.478 0.00 0.00 41.59 2.71
45 46 2.486982 GCTTGAGCATGAAGTCACACAT 59.513 45.455 0.00 0.00 41.59 3.21
46 47 1.875514 GCTTGAGCATGAAGTCACACA 59.124 47.619 0.00 0.00 41.59 3.72
47 48 2.149578 AGCTTGAGCATGAAGTCACAC 58.850 47.619 5.70 0.00 45.16 3.82
48 49 2.556144 AGCTTGAGCATGAAGTCACA 57.444 45.000 5.70 0.00 45.16 3.58
49 50 5.557891 ATTTAGCTTGAGCATGAAGTCAC 57.442 39.130 5.70 0.00 45.16 3.67
50 51 5.124457 GGAATTTAGCTTGAGCATGAAGTCA 59.876 40.000 5.70 0.00 45.16 3.41
51 52 5.356470 AGGAATTTAGCTTGAGCATGAAGTC 59.644 40.000 5.70 5.57 45.16 3.01
52 53 5.125097 CAGGAATTTAGCTTGAGCATGAAGT 59.875 40.000 5.70 0.00 45.16 3.01
53 54 5.356190 TCAGGAATTTAGCTTGAGCATGAAG 59.644 40.000 5.70 0.00 45.16 3.02
54 55 5.255687 TCAGGAATTTAGCTTGAGCATGAA 58.744 37.500 5.70 0.00 45.16 2.57
55 56 4.847198 TCAGGAATTTAGCTTGAGCATGA 58.153 39.130 5.70 0.00 45.16 3.07
56 57 4.036498 CCTCAGGAATTTAGCTTGAGCATG 59.964 45.833 5.70 0.00 45.16 4.06
57 58 4.205587 CCTCAGGAATTTAGCTTGAGCAT 58.794 43.478 5.70 0.00 45.16 3.79
58 59 3.614092 CCTCAGGAATTTAGCTTGAGCA 58.386 45.455 5.70 0.00 45.16 4.26
59 60 2.948315 CCCTCAGGAATTTAGCTTGAGC 59.052 50.000 0.00 0.00 37.93 4.26
60 61 4.227864 ACCCTCAGGAATTTAGCTTGAG 57.772 45.455 0.00 0.00 38.69 3.02
61 62 4.657814 AACCCTCAGGAATTTAGCTTGA 57.342 40.909 0.00 0.00 36.73 3.02
62 63 7.229506 CCTATTAACCCTCAGGAATTTAGCTTG 59.770 40.741 0.00 0.00 36.73 4.01
63 64 7.128883 TCCTATTAACCCTCAGGAATTTAGCTT 59.871 37.037 0.00 0.00 34.25 3.74
64 65 6.619852 TCCTATTAACCCTCAGGAATTTAGCT 59.380 38.462 0.00 0.00 34.25 3.32
65 66 6.838382 TCCTATTAACCCTCAGGAATTTAGC 58.162 40.000 0.00 0.00 34.25 3.09
66 67 9.289782 CAATCCTATTAACCCTCAGGAATTTAG 57.710 37.037 0.00 0.00 40.48 1.85
67 68 9.009675 TCAATCCTATTAACCCTCAGGAATTTA 57.990 33.333 0.00 0.00 40.48 1.40
68 69 7.780271 GTCAATCCTATTAACCCTCAGGAATTT 59.220 37.037 0.00 0.00 40.48 1.82
69 70 7.091993 TGTCAATCCTATTAACCCTCAGGAATT 60.092 37.037 0.00 0.00 40.48 2.17
70 71 6.389869 TGTCAATCCTATTAACCCTCAGGAAT 59.610 38.462 0.00 0.00 40.48 3.01
71 72 5.729229 TGTCAATCCTATTAACCCTCAGGAA 59.271 40.000 0.00 0.00 40.48 3.36
72 73 5.285401 TGTCAATCCTATTAACCCTCAGGA 58.715 41.667 0.00 0.00 41.31 3.86
73 74 5.630415 TGTCAATCCTATTAACCCTCAGG 57.370 43.478 0.00 0.00 40.04 3.86
74 75 7.072263 AGATGTCAATCCTATTAACCCTCAG 57.928 40.000 0.00 0.00 32.77 3.35
75 76 7.451731 AAGATGTCAATCCTATTAACCCTCA 57.548 36.000 0.00 0.00 32.77 3.86
76 77 8.652290 AGTAAGATGTCAATCCTATTAACCCTC 58.348 37.037 0.00 0.00 32.77 4.30
77 78 8.568617 AGTAAGATGTCAATCCTATTAACCCT 57.431 34.615 0.00 0.00 32.77 4.34
92 93 8.547967 TGTTTTCCTGACAATAGTAAGATGTC 57.452 34.615 7.00 7.00 42.90 3.06
93 94 8.784043 GTTGTTTTCCTGACAATAGTAAGATGT 58.216 33.333 0.00 0.00 39.03 3.06
94 95 8.783093 TGTTGTTTTCCTGACAATAGTAAGATG 58.217 33.333 0.00 0.00 39.03 2.90
95 96 8.918202 TGTTGTTTTCCTGACAATAGTAAGAT 57.082 30.769 0.00 0.00 39.03 2.40
96 97 8.783093 CATGTTGTTTTCCTGACAATAGTAAGA 58.217 33.333 0.00 0.00 39.03 2.10
97 98 8.567948 ACATGTTGTTTTCCTGACAATAGTAAG 58.432 33.333 0.00 0.00 39.03 2.34
98 99 8.349245 CACATGTTGTTTTCCTGACAATAGTAA 58.651 33.333 0.00 0.00 39.03 2.24
99 100 7.521423 GCACATGTTGTTTTCCTGACAATAGTA 60.521 37.037 0.00 0.00 39.03 1.82
100 101 6.735694 GCACATGTTGTTTTCCTGACAATAGT 60.736 38.462 0.00 0.00 39.03 2.12
101 102 5.630680 GCACATGTTGTTTTCCTGACAATAG 59.369 40.000 0.00 0.00 39.03 1.73
102 103 5.068329 TGCACATGTTGTTTTCCTGACAATA 59.932 36.000 0.00 0.00 39.03 1.90
103 104 4.141981 TGCACATGTTGTTTTCCTGACAAT 60.142 37.500 0.00 0.00 39.03 2.71
104 105 3.194329 TGCACATGTTGTTTTCCTGACAA 59.806 39.130 0.00 0.00 34.83 3.18
105 106 2.757314 TGCACATGTTGTTTTCCTGACA 59.243 40.909 0.00 0.00 0.00 3.58
106 107 3.066621 TCTGCACATGTTGTTTTCCTGAC 59.933 43.478 0.00 0.00 0.00 3.51
107 108 3.066621 GTCTGCACATGTTGTTTTCCTGA 59.933 43.478 0.00 0.00 0.00 3.86
108 109 3.067180 AGTCTGCACATGTTGTTTTCCTG 59.933 43.478 0.00 0.00 0.00 3.86
109 110 3.290710 AGTCTGCACATGTTGTTTTCCT 58.709 40.909 0.00 0.00 0.00 3.36
110 111 3.715628 AGTCTGCACATGTTGTTTTCC 57.284 42.857 0.00 0.00 0.00 3.13
111 112 3.798337 CCAAGTCTGCACATGTTGTTTTC 59.202 43.478 0.00 0.00 0.00 2.29
112 113 3.446873 TCCAAGTCTGCACATGTTGTTTT 59.553 39.130 0.00 0.00 0.00 2.43
113 114 3.023119 TCCAAGTCTGCACATGTTGTTT 58.977 40.909 0.00 0.00 0.00 2.83
114 115 2.653726 TCCAAGTCTGCACATGTTGTT 58.346 42.857 0.00 0.00 0.00 2.83
115 116 2.346766 TCCAAGTCTGCACATGTTGT 57.653 45.000 0.00 0.00 0.00 3.32
116 117 3.374745 GTTTCCAAGTCTGCACATGTTG 58.625 45.455 0.00 0.00 0.00 3.33
117 118 2.033299 CGTTTCCAAGTCTGCACATGTT 59.967 45.455 0.00 0.00 0.00 2.71
118 119 1.603802 CGTTTCCAAGTCTGCACATGT 59.396 47.619 0.00 0.00 0.00 3.21
119 120 1.872952 TCGTTTCCAAGTCTGCACATG 59.127 47.619 0.00 0.00 0.00 3.21
120 121 2.146342 CTCGTTTCCAAGTCTGCACAT 58.854 47.619 0.00 0.00 0.00 3.21
121 122 1.581934 CTCGTTTCCAAGTCTGCACA 58.418 50.000 0.00 0.00 0.00 4.57
122 123 0.868406 CCTCGTTTCCAAGTCTGCAC 59.132 55.000 0.00 0.00 0.00 4.57
123 124 0.250295 CCCTCGTTTCCAAGTCTGCA 60.250 55.000 0.00 0.00 0.00 4.41
124 125 0.034896 TCCCTCGTTTCCAAGTCTGC 59.965 55.000 0.00 0.00 0.00 4.26
125 126 1.618837 TCTCCCTCGTTTCCAAGTCTG 59.381 52.381 0.00 0.00 0.00 3.51
126 127 2.011122 TCTCCCTCGTTTCCAAGTCT 57.989 50.000 0.00 0.00 0.00 3.24
127 128 2.833631 TTCTCCCTCGTTTCCAAGTC 57.166 50.000 0.00 0.00 0.00 3.01
128 129 4.094476 TCTATTCTCCCTCGTTTCCAAGT 58.906 43.478 0.00 0.00 0.00 3.16
129 130 4.737855 TCTATTCTCCCTCGTTTCCAAG 57.262 45.455 0.00 0.00 0.00 3.61
130 131 4.323257 GGTTCTATTCTCCCTCGTTTCCAA 60.323 45.833 0.00 0.00 0.00 3.53
131 132 3.197116 GGTTCTATTCTCCCTCGTTTCCA 59.803 47.826 0.00 0.00 0.00 3.53
132 133 3.431905 GGGTTCTATTCTCCCTCGTTTCC 60.432 52.174 0.00 0.00 38.29 3.13
133 134 3.737355 CGGGTTCTATTCTCCCTCGTTTC 60.737 52.174 0.00 0.00 39.10 2.78
134 135 2.167900 CGGGTTCTATTCTCCCTCGTTT 59.832 50.000 0.00 0.00 39.10 3.60
135 136 1.755380 CGGGTTCTATTCTCCCTCGTT 59.245 52.381 0.00 0.00 39.10 3.85
136 137 1.400737 CGGGTTCTATTCTCCCTCGT 58.599 55.000 0.00 0.00 39.10 4.18
137 138 0.674534 CCGGGTTCTATTCTCCCTCG 59.325 60.000 0.00 0.00 39.10 4.63
138 139 2.083628 TCCGGGTTCTATTCTCCCTC 57.916 55.000 0.00 0.00 39.10 4.30
139 140 2.292984 ACTTCCGGGTTCTATTCTCCCT 60.293 50.000 0.00 0.00 39.10 4.20
140 141 2.117051 ACTTCCGGGTTCTATTCTCCC 58.883 52.381 0.00 0.00 37.98 4.30
141 142 3.908643 AACTTCCGGGTTCTATTCTCC 57.091 47.619 0.00 0.00 0.00 3.71
142 143 4.809958 GCTTAACTTCCGGGTTCTATTCTC 59.190 45.833 0.00 0.00 0.00 2.87
143 144 4.679905 CGCTTAACTTCCGGGTTCTATTCT 60.680 45.833 0.00 0.00 0.00 2.40
144 145 3.554731 CGCTTAACTTCCGGGTTCTATTC 59.445 47.826 0.00 0.00 0.00 1.75
145 146 3.055602 ACGCTTAACTTCCGGGTTCTATT 60.056 43.478 0.00 0.00 0.00 1.73
146 147 2.498885 ACGCTTAACTTCCGGGTTCTAT 59.501 45.455 0.00 0.00 0.00 1.98
147 148 1.895131 ACGCTTAACTTCCGGGTTCTA 59.105 47.619 0.00 0.00 0.00 2.10
148 149 0.683412 ACGCTTAACTTCCGGGTTCT 59.317 50.000 0.00 0.00 0.00 3.01
149 150 1.462283 GAACGCTTAACTTCCGGGTTC 59.538 52.381 0.00 0.00 41.26 3.62
150 151 1.071228 AGAACGCTTAACTTCCGGGTT 59.929 47.619 0.00 0.60 36.67 4.11
151 152 0.683412 AGAACGCTTAACTTCCGGGT 59.317 50.000 0.00 0.00 0.00 5.28
152 153 1.337447 TGAGAACGCTTAACTTCCGGG 60.337 52.381 0.00 0.00 0.00 5.73
153 154 1.993370 CTGAGAACGCTTAACTTCCGG 59.007 52.381 0.00 0.00 0.00 5.14
154 155 1.993370 CCTGAGAACGCTTAACTTCCG 59.007 52.381 0.00 0.00 0.00 4.30
155 156 1.732809 GCCTGAGAACGCTTAACTTCC 59.267 52.381 0.00 0.00 0.00 3.46
156 157 2.413453 CAGCCTGAGAACGCTTAACTTC 59.587 50.000 0.00 0.00 31.40 3.01
157 158 2.417719 CAGCCTGAGAACGCTTAACTT 58.582 47.619 0.00 0.00 31.40 2.66
158 159 1.338200 CCAGCCTGAGAACGCTTAACT 60.338 52.381 0.00 0.00 31.40 2.24
159 160 1.079503 CCAGCCTGAGAACGCTTAAC 58.920 55.000 0.00 0.00 31.40 2.01
160 161 0.973632 TCCAGCCTGAGAACGCTTAA 59.026 50.000 0.00 0.00 31.40 1.85
161 162 0.532573 CTCCAGCCTGAGAACGCTTA 59.467 55.000 0.00 0.00 34.11 3.09
162 163 1.294780 CTCCAGCCTGAGAACGCTT 59.705 57.895 0.00 0.00 34.11 4.68
163 164 0.612174 TACTCCAGCCTGAGAACGCT 60.612 55.000 7.07 0.00 36.22 5.07
164 165 0.179124 CTACTCCAGCCTGAGAACGC 60.179 60.000 7.07 0.00 36.22 4.84
165 166 1.135257 CACTACTCCAGCCTGAGAACG 60.135 57.143 7.07 0.00 36.22 3.95
166 167 2.165437 CTCACTACTCCAGCCTGAGAAC 59.835 54.545 7.07 0.00 31.84 3.01
167 168 2.041755 TCTCACTACTCCAGCCTGAGAA 59.958 50.000 7.07 0.00 34.89 2.87
168 169 1.636003 TCTCACTACTCCAGCCTGAGA 59.364 52.381 7.07 0.00 35.24 3.27
169 170 2.023673 CTCTCACTACTCCAGCCTGAG 58.976 57.143 0.00 0.00 38.37 3.35
170 171 1.341482 CCTCTCACTACTCCAGCCTGA 60.341 57.143 0.00 0.00 0.00 3.86
171 172 1.110442 CCTCTCACTACTCCAGCCTG 58.890 60.000 0.00 0.00 0.00 4.85
172 173 1.003646 TCCTCTCACTACTCCAGCCT 58.996 55.000 0.00 0.00 0.00 4.58
173 174 1.686052 CATCCTCTCACTACTCCAGCC 59.314 57.143 0.00 0.00 0.00 4.85
174 175 1.686052 CCATCCTCTCACTACTCCAGC 59.314 57.143 0.00 0.00 0.00 4.85
175 176 2.315176 CCCATCCTCTCACTACTCCAG 58.685 57.143 0.00 0.00 0.00 3.86
176 177 1.646447 ACCCATCCTCTCACTACTCCA 59.354 52.381 0.00 0.00 0.00 3.86
177 178 2.035632 CACCCATCCTCTCACTACTCC 58.964 57.143 0.00 0.00 0.00 3.85
178 179 2.691011 GTCACCCATCCTCTCACTACTC 59.309 54.545 0.00 0.00 0.00 2.59
179 180 2.624557 GGTCACCCATCCTCTCACTACT 60.625 54.545 0.00 0.00 0.00 2.57
180 181 1.757699 GGTCACCCATCCTCTCACTAC 59.242 57.143 0.00 0.00 0.00 2.73
181 182 1.685180 CGGTCACCCATCCTCTCACTA 60.685 57.143 0.00 0.00 0.00 2.74
182 183 0.972983 CGGTCACCCATCCTCTCACT 60.973 60.000 0.00 0.00 0.00 3.41
183 184 1.258445 ACGGTCACCCATCCTCTCAC 61.258 60.000 0.00 0.00 0.00 3.51
184 185 0.970937 GACGGTCACCCATCCTCTCA 60.971 60.000 2.62 0.00 0.00 3.27
185 186 1.677637 GGACGGTCACCCATCCTCTC 61.678 65.000 10.76 0.00 0.00 3.20
186 187 1.686110 GGACGGTCACCCATCCTCT 60.686 63.158 10.76 0.00 0.00 3.69
187 188 2.901042 GGACGGTCACCCATCCTC 59.099 66.667 10.76 0.00 0.00 3.71
188 189 3.075005 CGGACGGTCACCCATCCT 61.075 66.667 10.76 0.00 0.00 3.24
189 190 4.157120 CCGGACGGTCACCCATCC 62.157 72.222 10.76 1.98 0.00 3.51
190 191 2.175035 TTTCCGGACGGTCACCCATC 62.175 60.000 1.83 0.00 36.47 3.51
191 192 2.180159 CTTTCCGGACGGTCACCCAT 62.180 60.000 1.83 0.00 36.47 4.00
192 193 2.843411 TTTCCGGACGGTCACCCA 60.843 61.111 1.83 0.00 36.47 4.51
193 194 2.047560 CTTTCCGGACGGTCACCC 60.048 66.667 1.83 0.00 36.47 4.61
194 195 0.318120 TAACTTTCCGGACGGTCACC 59.682 55.000 1.83 0.00 36.47 4.02
195 196 1.270550 TCTAACTTTCCGGACGGTCAC 59.729 52.381 1.83 0.00 36.47 3.67
196 197 1.619654 TCTAACTTTCCGGACGGTCA 58.380 50.000 1.83 0.00 36.47 4.02
197 198 2.165030 TCATCTAACTTTCCGGACGGTC 59.835 50.000 1.83 0.00 36.47 4.79
198 199 2.173519 TCATCTAACTTTCCGGACGGT 58.826 47.619 1.83 2.54 36.47 4.83
199 200 2.953466 TCATCTAACTTTCCGGACGG 57.047 50.000 1.83 3.96 0.00 4.79
200 201 4.034048 CCAAATCATCTAACTTTCCGGACG 59.966 45.833 1.83 0.00 0.00 4.79
201 202 5.183228 TCCAAATCATCTAACTTTCCGGAC 58.817 41.667 1.83 0.00 0.00 4.79
202 203 5.429681 TCCAAATCATCTAACTTTCCGGA 57.570 39.130 0.00 0.00 0.00 5.14
203 204 6.318648 TCATTCCAAATCATCTAACTTTCCGG 59.681 38.462 0.00 0.00 0.00 5.14
204 205 7.320443 TCATTCCAAATCATCTAACTTTCCG 57.680 36.000 0.00 0.00 0.00 4.30
205 206 8.906867 TCATCATTCCAAATCATCTAACTTTCC 58.093 33.333 0.00 0.00 0.00 3.13
206 207 9.947669 CTCATCATTCCAAATCATCTAACTTTC 57.052 33.333 0.00 0.00 0.00 2.62
207 208 8.910944 CCTCATCATTCCAAATCATCTAACTTT 58.089 33.333 0.00 0.00 0.00 2.66
208 209 7.504911 CCCTCATCATTCCAAATCATCTAACTT 59.495 37.037 0.00 0.00 0.00 2.66
209 210 7.002879 CCCTCATCATTCCAAATCATCTAACT 58.997 38.462 0.00 0.00 0.00 2.24
210 211 6.208204 CCCCTCATCATTCCAAATCATCTAAC 59.792 42.308 0.00 0.00 0.00 2.34
211 212 6.126097 ACCCCTCATCATTCCAAATCATCTAA 60.126 38.462 0.00 0.00 0.00 2.10
212 213 5.373555 ACCCCTCATCATTCCAAATCATCTA 59.626 40.000 0.00 0.00 0.00 1.98
213 214 4.169461 ACCCCTCATCATTCCAAATCATCT 59.831 41.667 0.00 0.00 0.00 2.90
214 215 4.280174 CACCCCTCATCATTCCAAATCATC 59.720 45.833 0.00 0.00 0.00 2.92
215 216 4.079038 TCACCCCTCATCATTCCAAATCAT 60.079 41.667 0.00 0.00 0.00 2.45
216 217 3.269118 TCACCCCTCATCATTCCAAATCA 59.731 43.478 0.00 0.00 0.00 2.57
217 218 3.902218 TCACCCCTCATCATTCCAAATC 58.098 45.455 0.00 0.00 0.00 2.17
218 219 4.547886 ATCACCCCTCATCATTCCAAAT 57.452 40.909 0.00 0.00 0.00 2.32
219 220 4.335735 AATCACCCCTCATCATTCCAAA 57.664 40.909 0.00 0.00 0.00 3.28
220 221 4.726317 TCTAATCACCCCTCATCATTCCAA 59.274 41.667 0.00 0.00 0.00 3.53
221 222 4.306391 TCTAATCACCCCTCATCATTCCA 58.694 43.478 0.00 0.00 0.00 3.53
222 223 4.594920 TCTCTAATCACCCCTCATCATTCC 59.405 45.833 0.00 0.00 0.00 3.01
223 224 5.815233 TCTCTAATCACCCCTCATCATTC 57.185 43.478 0.00 0.00 0.00 2.67
224 225 6.776887 AATCTCTAATCACCCCTCATCATT 57.223 37.500 0.00 0.00 0.00 2.57
225 226 7.251936 TCTAATCTCTAATCACCCCTCATCAT 58.748 38.462 0.00 0.00 0.00 2.45
226 227 6.624297 TCTAATCTCTAATCACCCCTCATCA 58.376 40.000 0.00 0.00 0.00 3.07
227 228 6.154363 CCTCTAATCTCTAATCACCCCTCATC 59.846 46.154 0.00 0.00 0.00 2.92
228 229 6.022315 CCTCTAATCTCTAATCACCCCTCAT 58.978 44.000 0.00 0.00 0.00 2.90
229 230 5.103043 ACCTCTAATCTCTAATCACCCCTCA 60.103 44.000 0.00 0.00 0.00 3.86
230 231 5.399113 ACCTCTAATCTCTAATCACCCCTC 58.601 45.833 0.00 0.00 0.00 4.30
231 232 5.426325 ACCTCTAATCTCTAATCACCCCT 57.574 43.478 0.00 0.00 0.00 4.79
232 233 7.613551 TTAACCTCTAATCTCTAATCACCCC 57.386 40.000 0.00 0.00 0.00 4.95
239 240 9.823647 CTGCTCAATTTAACCTCTAATCTCTAA 57.176 33.333 0.00 0.00 0.00 2.10
240 241 8.982723 ACTGCTCAATTTAACCTCTAATCTCTA 58.017 33.333 0.00 0.00 0.00 2.43
241 242 7.768120 CACTGCTCAATTTAACCTCTAATCTCT 59.232 37.037 0.00 0.00 0.00 3.10
242 243 7.766278 TCACTGCTCAATTTAACCTCTAATCTC 59.234 37.037 0.00 0.00 0.00 2.75
243 244 7.624549 TCACTGCTCAATTTAACCTCTAATCT 58.375 34.615 0.00 0.00 0.00 2.40
244 245 7.849804 TCACTGCTCAATTTAACCTCTAATC 57.150 36.000 0.00 0.00 0.00 1.75
245 246 8.049117 TCATCACTGCTCAATTTAACCTCTAAT 58.951 33.333 0.00 0.00 0.00 1.73
246 247 7.394016 TCATCACTGCTCAATTTAACCTCTAA 58.606 34.615 0.00 0.00 0.00 2.10
247 248 6.946340 TCATCACTGCTCAATTTAACCTCTA 58.054 36.000 0.00 0.00 0.00 2.43
248 249 5.809001 TCATCACTGCTCAATTTAACCTCT 58.191 37.500 0.00 0.00 0.00 3.69
249 250 5.065731 CCTCATCACTGCTCAATTTAACCTC 59.934 44.000 0.00 0.00 0.00 3.85
250 251 4.946157 CCTCATCACTGCTCAATTTAACCT 59.054 41.667 0.00 0.00 0.00 3.50
251 252 4.096984 CCCTCATCACTGCTCAATTTAACC 59.903 45.833 0.00 0.00 0.00 2.85
252 253 4.096984 CCCCTCATCACTGCTCAATTTAAC 59.903 45.833 0.00 0.00 0.00 2.01
253 254 4.263905 ACCCCTCATCACTGCTCAATTTAA 60.264 41.667 0.00 0.00 0.00 1.52
254 255 3.266772 ACCCCTCATCACTGCTCAATTTA 59.733 43.478 0.00 0.00 0.00 1.40
255 256 2.042162 ACCCCTCATCACTGCTCAATTT 59.958 45.455 0.00 0.00 0.00 1.82
256 257 1.637553 ACCCCTCATCACTGCTCAATT 59.362 47.619 0.00 0.00 0.00 2.32
257 258 1.064906 CACCCCTCATCACTGCTCAAT 60.065 52.381 0.00 0.00 0.00 2.57
258 259 0.325933 CACCCCTCATCACTGCTCAA 59.674 55.000 0.00 0.00 0.00 3.02
259 260 0.545071 TCACCCCTCATCACTGCTCA 60.545 55.000 0.00 0.00 0.00 4.26
260 261 0.835941 ATCACCCCTCATCACTGCTC 59.164 55.000 0.00 0.00 0.00 4.26
261 262 1.293062 AATCACCCCTCATCACTGCT 58.707 50.000 0.00 0.00 0.00 4.24
262 263 2.435805 TCTAATCACCCCTCATCACTGC 59.564 50.000 0.00 0.00 0.00 4.40
263 264 3.070734 CCTCTAATCACCCCTCATCACTG 59.929 52.174 0.00 0.00 0.00 3.66
264 265 3.310954 ACCTCTAATCACCCCTCATCACT 60.311 47.826 0.00 0.00 0.00 3.41
265 266 3.041946 ACCTCTAATCACCCCTCATCAC 58.958 50.000 0.00 0.00 0.00 3.06
266 267 3.421394 ACCTCTAATCACCCCTCATCA 57.579 47.619 0.00 0.00 0.00 3.07
267 268 5.888982 TTAACCTCTAATCACCCCTCATC 57.111 43.478 0.00 0.00 0.00 2.92
268 269 6.652205 TTTTAACCTCTAATCACCCCTCAT 57.348 37.500 0.00 0.00 0.00 2.90
269 270 6.652205 ATTTTAACCTCTAATCACCCCTCA 57.348 37.500 0.00 0.00 0.00 3.86
270 271 9.642343 AATTATTTTAACCTCTAATCACCCCTC 57.358 33.333 0.00 0.00 0.00 4.30
271 272 9.642343 GAATTATTTTAACCTCTAATCACCCCT 57.358 33.333 0.00 0.00 0.00 4.79
272 273 9.416284 TGAATTATTTTAACCTCTAATCACCCC 57.584 33.333 0.00 0.00 0.00 4.95
331 332 9.470399 ACCGGTACTAAAGGAAATTTTATGATT 57.530 29.630 4.49 0.00 32.01 2.57
332 333 9.470399 AACCGGTACTAAAGGAAATTTTATGAT 57.530 29.630 8.00 0.00 32.01 2.45
333 334 8.732531 CAACCGGTACTAAAGGAAATTTTATGA 58.267 33.333 8.00 0.00 32.01 2.15
334 335 7.971722 CCAACCGGTACTAAAGGAAATTTTATG 59.028 37.037 8.00 0.00 32.01 1.90
335 336 7.670979 ACCAACCGGTACTAAAGGAAATTTTAT 59.329 33.333 8.00 0.00 46.71 1.40
336 337 7.003482 ACCAACCGGTACTAAAGGAAATTTTA 58.997 34.615 8.00 0.00 46.71 1.52
337 338 5.834742 ACCAACCGGTACTAAAGGAAATTTT 59.165 36.000 8.00 0.00 46.71 1.82
338 339 5.242171 CACCAACCGGTACTAAAGGAAATTT 59.758 40.000 8.00 0.00 46.94 1.82
339 340 4.763279 CACCAACCGGTACTAAAGGAAATT 59.237 41.667 8.00 0.00 46.94 1.82
340 341 4.202493 ACACCAACCGGTACTAAAGGAAAT 60.202 41.667 8.00 0.00 46.94 2.17
341 342 3.136260 ACACCAACCGGTACTAAAGGAAA 59.864 43.478 8.00 0.00 46.94 3.13
342 343 2.705127 ACACCAACCGGTACTAAAGGAA 59.295 45.455 8.00 0.00 46.94 3.36
343 344 2.328319 ACACCAACCGGTACTAAAGGA 58.672 47.619 8.00 0.00 46.94 3.36
344 345 2.845363 ACACCAACCGGTACTAAAGG 57.155 50.000 8.00 6.03 46.94 3.11
345 346 5.481105 TGATAACACCAACCGGTACTAAAG 58.519 41.667 8.00 0.00 46.94 1.85
346 347 5.480642 TGATAACACCAACCGGTACTAAA 57.519 39.130 8.00 0.00 46.94 1.85
347 348 5.237048 GTTGATAACACCAACCGGTACTAA 58.763 41.667 8.00 0.00 46.94 2.24
348 349 4.819769 GTTGATAACACCAACCGGTACTA 58.180 43.478 8.00 0.00 46.94 1.82
349 350 3.667360 GTTGATAACACCAACCGGTACT 58.333 45.455 8.00 0.00 46.94 2.73
356 357 1.808343 GTCCCGGTTGATAACACCAAC 59.192 52.381 0.00 0.00 42.18 3.77
357 358 1.700739 AGTCCCGGTTGATAACACCAA 59.299 47.619 0.00 0.00 0.00 3.67
358 359 1.354101 AGTCCCGGTTGATAACACCA 58.646 50.000 0.00 0.00 0.00 4.17
359 360 3.615224 TTAGTCCCGGTTGATAACACC 57.385 47.619 0.00 0.00 0.00 4.16
360 361 3.937079 CCTTTAGTCCCGGTTGATAACAC 59.063 47.826 0.00 0.00 0.00 3.32
361 362 3.583966 ACCTTTAGTCCCGGTTGATAACA 59.416 43.478 0.00 0.00 0.00 2.41
362 363 3.937079 CACCTTTAGTCCCGGTTGATAAC 59.063 47.826 0.00 0.00 0.00 1.89
363 364 3.054948 CCACCTTTAGTCCCGGTTGATAA 60.055 47.826 0.00 0.00 0.00 1.75
364 365 2.502538 CCACCTTTAGTCCCGGTTGATA 59.497 50.000 0.00 0.00 0.00 2.15
365 366 1.280998 CCACCTTTAGTCCCGGTTGAT 59.719 52.381 0.00 0.00 0.00 2.57
366 367 0.688487 CCACCTTTAGTCCCGGTTGA 59.312 55.000 0.00 0.00 0.00 3.18
367 368 0.688487 TCCACCTTTAGTCCCGGTTG 59.312 55.000 0.00 0.00 0.00 3.77
368 369 0.689055 GTCCACCTTTAGTCCCGGTT 59.311 55.000 0.00 0.00 0.00 4.44
369 370 1.196766 GGTCCACCTTTAGTCCCGGT 61.197 60.000 0.00 0.00 0.00 5.28
370 371 0.908180 AGGTCCACCTTTAGTCCCGG 60.908 60.000 0.00 0.00 46.09 5.73
371 372 2.680066 AGGTCCACCTTTAGTCCCG 58.320 57.895 0.00 0.00 46.09 5.14
381 382 4.416738 GCTGCCTGGAGGTCCACC 62.417 72.222 0.00 0.00 42.01 4.61
382 383 4.767255 CGCTGCCTGGAGGTCCAC 62.767 72.222 0.00 0.00 42.01 4.02
401 402 1.078426 CTAAAGGCCCTCCACGTGG 60.078 63.158 29.26 29.26 33.74 4.94
402 403 0.391263 GACTAAAGGCCCTCCACGTG 60.391 60.000 9.08 9.08 33.74 4.49
403 404 1.551019 GGACTAAAGGCCCTCCACGT 61.551 60.000 0.00 0.00 33.74 4.49
404 405 1.221021 GGACTAAAGGCCCTCCACG 59.779 63.158 0.00 0.00 33.74 4.94
405 406 1.608154 GGGACTAAAGGCCCTCCAC 59.392 63.158 14.19 0.00 41.31 4.02
406 407 1.993391 CGGGACTAAAGGCCCTCCA 60.993 63.158 18.97 0.00 42.40 3.86
407 408 2.743179 CCGGGACTAAAGGCCCTCC 61.743 68.421 18.97 0.00 42.40 4.30
408 409 1.559965 AACCGGGACTAAAGGCCCTC 61.560 60.000 18.97 0.00 42.40 4.30
409 410 1.540617 AACCGGGACTAAAGGCCCT 60.541 57.895 18.97 0.00 42.40 5.19
410 411 1.077930 GAACCGGGACTAAAGGCCC 60.078 63.158 11.29 11.29 41.11 5.80
411 412 0.327259 AAGAACCGGGACTAAAGGCC 59.673 55.000 6.32 0.00 0.00 5.19
412 413 2.027837 TGTAAGAACCGGGACTAAAGGC 60.028 50.000 6.32 0.00 0.00 4.35
413 414 3.967332 TGTAAGAACCGGGACTAAAGG 57.033 47.619 6.32 0.00 0.00 3.11
414 415 5.080969 TCATGTAAGAACCGGGACTAAAG 57.919 43.478 6.32 0.00 0.00 1.85
415 416 5.240121 GTTCATGTAAGAACCGGGACTAAA 58.760 41.667 6.32 0.00 41.52 1.85
416 417 4.824289 GTTCATGTAAGAACCGGGACTAA 58.176 43.478 6.32 0.00 41.52 2.24
417 418 4.460948 GTTCATGTAAGAACCGGGACTA 57.539 45.455 6.32 0.00 41.52 2.59
418 419 3.329929 GTTCATGTAAGAACCGGGACT 57.670 47.619 6.32 0.73 41.52 3.85
425 426 7.444487 ACCTTTAGTCTTGGTTCATGTAAGAAC 59.556 37.037 0.00 0.00 45.50 3.01
426 427 7.514721 ACCTTTAGTCTTGGTTCATGTAAGAA 58.485 34.615 0.00 0.00 32.76 2.52
427 428 7.074653 ACCTTTAGTCTTGGTTCATGTAAGA 57.925 36.000 0.00 0.00 0.00 2.10
428 429 6.371825 GGACCTTTAGTCTTGGTTCATGTAAG 59.628 42.308 0.00 0.00 45.54 2.34
429 430 6.043938 AGGACCTTTAGTCTTGGTTCATGTAA 59.956 38.462 0.00 0.00 45.54 2.41
430 431 5.546499 AGGACCTTTAGTCTTGGTTCATGTA 59.454 40.000 0.00 0.00 45.54 2.29
431 432 4.351111 AGGACCTTTAGTCTTGGTTCATGT 59.649 41.667 0.00 0.00 45.54 3.21
432 433 4.911390 AGGACCTTTAGTCTTGGTTCATG 58.089 43.478 0.00 0.00 45.54 3.07
433 434 5.584551 AAGGACCTTTAGTCTTGGTTCAT 57.415 39.130 0.00 0.00 45.54 2.57
434 435 5.382664 AAAGGACCTTTAGTCTTGGTTCA 57.617 39.130 18.19 0.00 45.54 3.18
435 436 6.546403 AGAAAAAGGACCTTTAGTCTTGGTTC 59.454 38.462 19.86 15.62 45.54 3.62
436 437 6.432581 AGAAAAAGGACCTTTAGTCTTGGTT 58.567 36.000 19.86 7.84 45.54 3.67
437 438 6.014771 AGAAAAAGGACCTTTAGTCTTGGT 57.985 37.500 19.86 0.00 45.54 3.67
438 439 7.225011 AGTAGAAAAAGGACCTTTAGTCTTGG 58.775 38.462 26.48 0.00 45.54 3.61
439 440 9.425577 CTAGTAGAAAAAGGACCTTTAGTCTTG 57.574 37.037 26.48 15.56 45.54 3.02
440 441 9.156940 ACTAGTAGAAAAAGGACCTTTAGTCTT 57.843 33.333 26.48 16.31 45.54 3.01
441 442 8.586744 CACTAGTAGAAAAAGGACCTTTAGTCT 58.413 37.037 25.39 25.39 45.54 3.24
442 443 8.366401 ACACTAGTAGAAAAAGGACCTTTAGTC 58.634 37.037 19.86 18.36 45.51 2.59
443 444 8.260099 ACACTAGTAGAAAAAGGACCTTTAGT 57.740 34.615 19.86 14.00 31.99 2.24
444 445 9.636879 GTACACTAGTAGAAAAAGGACCTTTAG 57.363 37.037 19.86 13.39 31.99 1.85
445 446 9.372189 AGTACACTAGTAGAAAAAGGACCTTTA 57.628 33.333 19.86 1.30 31.99 1.85
446 447 8.260099 AGTACACTAGTAGAAAAAGGACCTTT 57.740 34.615 14.03 14.03 34.94 3.11
447 448 7.852550 AGTACACTAGTAGAAAAAGGACCTT 57.147 36.000 0.00 0.00 0.00 3.50
448 449 7.852550 AAGTACACTAGTAGAAAAAGGACCT 57.147 36.000 3.59 0.00 0.00 3.85
449 450 8.366401 AGAAAGTACACTAGTAGAAAAAGGACC 58.634 37.037 3.59 0.00 0.00 4.46
450 451 9.409312 GAGAAAGTACACTAGTAGAAAAAGGAC 57.591 37.037 3.59 0.00 0.00 3.85
451 452 8.583296 GGAGAAAGTACACTAGTAGAAAAAGGA 58.417 37.037 3.59 0.00 0.00 3.36
452 453 7.541437 CGGAGAAAGTACACTAGTAGAAAAAGG 59.459 40.741 3.59 0.00 0.00 3.11
453 454 7.062022 GCGGAGAAAGTACACTAGTAGAAAAAG 59.938 40.741 3.59 0.00 0.00 2.27
454 455 6.865205 GCGGAGAAAGTACACTAGTAGAAAAA 59.135 38.462 3.59 0.00 0.00 1.94
455 456 6.385033 GCGGAGAAAGTACACTAGTAGAAAA 58.615 40.000 3.59 0.00 0.00 2.29
456 457 5.105997 GGCGGAGAAAGTACACTAGTAGAAA 60.106 44.000 3.59 0.00 0.00 2.52
457 458 4.397417 GGCGGAGAAAGTACACTAGTAGAA 59.603 45.833 3.59 0.00 0.00 2.10
458 459 3.944015 GGCGGAGAAAGTACACTAGTAGA 59.056 47.826 3.59 0.00 0.00 2.59
459 460 3.242673 CGGCGGAGAAAGTACACTAGTAG 60.243 52.174 0.00 0.00 0.00 2.57
460 461 2.679837 CGGCGGAGAAAGTACACTAGTA 59.320 50.000 0.00 0.00 0.00 1.82
461 462 1.471684 CGGCGGAGAAAGTACACTAGT 59.528 52.381 0.00 0.00 0.00 2.57
462 463 1.202268 CCGGCGGAGAAAGTACACTAG 60.202 57.143 24.41 0.00 0.00 2.57
463 464 0.813184 CCGGCGGAGAAAGTACACTA 59.187 55.000 24.41 0.00 0.00 2.74
464 465 1.590147 CCGGCGGAGAAAGTACACT 59.410 57.895 24.41 0.00 0.00 3.55
465 466 2.098831 GCCGGCGGAGAAAGTACAC 61.099 63.158 33.44 3.13 0.00 2.90
466 467 2.263540 GCCGGCGGAGAAAGTACA 59.736 61.111 33.44 0.00 0.00 2.90
487 488 0.968901 AAGCGGATGGACCAGTCGTA 60.969 55.000 17.05 0.00 38.90 3.43
531 532 1.808411 TGAAATCCTTGTCGAGCACC 58.192 50.000 0.00 0.00 0.00 5.01
532 533 3.002791 TGATGAAATCCTTGTCGAGCAC 58.997 45.455 0.00 0.00 44.73 4.40
533 534 3.002791 GTGATGAAATCCTTGTCGAGCA 58.997 45.455 0.00 0.00 44.73 4.26
534 535 3.002791 TGTGATGAAATCCTTGTCGAGC 58.997 45.455 0.00 0.00 44.73 5.03
540 541 7.278646 TCGAGATAAACTGTGATGAAATCCTTG 59.721 37.037 0.00 0.00 44.73 3.61
548 549 4.399303 TGAGCTCGAGATAAACTGTGATGA 59.601 41.667 18.75 0.00 0.00 2.92
553 554 4.930963 CTCATGAGCTCGAGATAAACTGT 58.069 43.478 18.75 0.00 0.00 3.55
584 585 3.329889 AGGATGCCCGCACCTTGA 61.330 61.111 0.00 0.00 37.58 3.02
661 666 0.110486 GCTGGGTTGAAGGTCCTCAA 59.890 55.000 0.00 0.00 32.89 3.02
894 905 3.515502 AGAAAGTGACATCGAATCCCTCA 59.484 43.478 0.00 0.00 0.00 3.86
971 986 1.277557 AGAGCTCCGCTTTGAAGACAT 59.722 47.619 10.93 0.00 39.88 3.06
1050 1068 0.373716 GTAGGGCGCTGAAAACATCG 59.626 55.000 14.51 0.00 0.00 3.84
1068 1086 9.965902 AAAGAGTCTGTATAAATGAAATGGAGT 57.034 29.630 0.00 0.00 0.00 3.85
1086 1104 1.980765 TCACCATCAGGCAAAGAGTCT 59.019 47.619 0.00 0.00 39.06 3.24
1396 1444 2.547211 GAGCTACTCATGCATTGCGAAT 59.453 45.455 0.00 0.00 0.00 3.34
1441 1489 4.646572 GGGTCAGTCACTTTGAGATTCTT 58.353 43.478 0.00 0.00 0.00 2.52
1443 1491 2.996621 CGGGTCAGTCACTTTGAGATTC 59.003 50.000 0.00 0.00 0.00 2.52
1444 1492 2.368875 ACGGGTCAGTCACTTTGAGATT 59.631 45.455 0.00 0.00 0.00 2.40
1448 1496 1.340248 GAGACGGGTCAGTCACTTTGA 59.660 52.381 1.17 0.00 43.24 2.69
1449 1497 1.341531 AGAGACGGGTCAGTCACTTTG 59.658 52.381 1.17 0.00 43.24 2.77
1450 1498 1.614413 GAGAGACGGGTCAGTCACTTT 59.386 52.381 1.17 0.00 41.03 2.66
1452 1500 0.110678 TGAGAGACGGGTCAGTCACT 59.889 55.000 1.17 2.95 43.03 3.41
1453 1501 1.178276 ATGAGAGACGGGTCAGTCAC 58.822 55.000 1.17 0.00 43.24 3.67
1454 1502 2.026169 ACTATGAGAGACGGGTCAGTCA 60.026 50.000 1.17 3.90 43.24 3.41
1455 1503 2.645802 ACTATGAGAGACGGGTCAGTC 58.354 52.381 1.17 0.00 41.23 3.51
1456 1504 2.810870 ACTATGAGAGACGGGTCAGT 57.189 50.000 1.17 0.00 0.00 3.41
1457 1505 4.641094 ACTAAACTATGAGAGACGGGTCAG 59.359 45.833 1.17 0.00 0.00 3.51
1459 1507 4.883006 AGACTAAACTATGAGAGACGGGTC 59.117 45.833 0.00 0.00 0.00 4.46
1461 1509 5.357314 TCAAGACTAAACTATGAGAGACGGG 59.643 44.000 0.00 0.00 0.00 5.28
1462 1510 6.438259 TCAAGACTAAACTATGAGAGACGG 57.562 41.667 0.00 0.00 0.00 4.79
1463 1511 7.531716 ACTTCAAGACTAAACTATGAGAGACG 58.468 38.462 0.00 0.00 0.00 4.18
1464 1512 9.699703 AAACTTCAAGACTAAACTATGAGAGAC 57.300 33.333 0.00 0.00 0.00 3.36
1466 1514 9.698309 TCAAACTTCAAGACTAAACTATGAGAG 57.302 33.333 0.00 0.00 0.00 3.20
1507 1757 3.069586 TCCGATCGATGGCTAAAATCAGT 59.930 43.478 18.66 0.00 0.00 3.41
1574 1826 7.036996 TGAACACTAATTTTGATGCAGTGAA 57.963 32.000 8.82 0.00 39.13 3.18
1597 1849 6.044682 AGGAAAACAACTTTTGCTGAAGATG 58.955 36.000 6.64 7.30 44.03 2.90
1611 1863 3.378427 AGAGTGCACAGAAGGAAAACAAC 59.622 43.478 21.04 0.00 0.00 3.32
1642 1894 8.343974 CATTACATGCAAATGTAGACCAAATC 57.656 34.615 11.46 0.00 38.16 2.17
1738 2001 9.158233 GTTAATCCTACTAATTGTGTTGCACTA 57.842 33.333 0.00 0.00 35.11 2.74
1785 2048 7.504403 AATGTAATTTTCATGGGAACACAACA 58.496 30.769 0.00 0.00 36.41 3.33
1794 2059 8.256605 TGTATGTTGGAATGTAATTTTCATGGG 58.743 33.333 0.00 0.00 36.07 4.00
1882 2186 7.702386 TCAAACATGAAAAATTGTCGAGAAGA 58.298 30.769 0.00 0.00 0.00 2.87
1934 2238 2.086869 ACAAATGCCATCTCAGGTTCG 58.913 47.619 0.00 0.00 0.00 3.95
1989 2293 4.091509 CCTATAAACGCAGACAACAGTGAC 59.908 45.833 0.00 0.00 0.00 3.67
2035 2339 4.433615 TCGCTCTCAGGTTTCAATCATAC 58.566 43.478 0.00 0.00 0.00 2.39
2064 2372 3.623060 AGTGTAGGCAAGCAAATATCACG 59.377 43.478 0.00 0.00 0.00 4.35
2087 2404 1.579698 ATGCAGCGAGCTACATTCAG 58.420 50.000 5.05 0.00 45.94 3.02
2096 2413 3.411415 ACTTTCATTAATGCAGCGAGC 57.589 42.857 10.76 0.00 45.96 5.03
2099 2416 3.065233 TGCCTACTTTCATTAATGCAGCG 59.935 43.478 10.76 4.56 0.00 5.18
2101 2418 9.188588 CATATTTGCCTACTTTCATTAATGCAG 57.811 33.333 10.76 10.99 0.00 4.41
2190 2507 5.010617 GTGCACGGGGGAATCAAATAATTAT 59.989 40.000 0.00 0.00 0.00 1.28
2191 2508 4.339814 GTGCACGGGGGAATCAAATAATTA 59.660 41.667 0.00 0.00 0.00 1.40
2209 2526 3.312421 AGACTGTGTTTGTATGTGTGCAC 59.688 43.478 10.75 10.75 0.00 4.57
2211 2528 3.058914 GGAGACTGTGTTTGTATGTGTGC 60.059 47.826 0.00 0.00 0.00 4.57
2222 2539 2.241176 TGTTCCAAAGGGAGACTGTGTT 59.759 45.455 0.00 0.00 46.01 3.32
2233 2555 6.758254 ACAGGTTCAATTTATGTTCCAAAGG 58.242 36.000 0.00 0.00 0.00 3.11
2250 2572 0.663153 GGTGTGAGTGCAACAGGTTC 59.337 55.000 0.00 0.00 41.43 3.62
2263 2585 6.909550 AGTAAATTGCCTTTATTGGTGTGA 57.090 33.333 0.00 0.00 32.12 3.58
2290 2612 1.880675 ACCGCGTGAGGTATCATCTAG 59.119 52.381 4.92 0.00 43.89 2.43
2291 2613 1.607148 CACCGCGTGAGGTATCATCTA 59.393 52.381 4.92 0.00 43.89 1.98
2292 2614 0.385751 CACCGCGTGAGGTATCATCT 59.614 55.000 4.92 0.00 43.89 2.90
2293 2615 1.215655 GCACCGCGTGAGGTATCATC 61.216 60.000 4.92 0.00 43.89 2.92
2294 2616 1.227263 GCACCGCGTGAGGTATCAT 60.227 57.895 4.92 0.00 43.89 2.45
2295 2617 2.183300 GCACCGCGTGAGGTATCA 59.817 61.111 4.92 0.00 43.89 2.15
2296 2618 1.878522 CAGCACCGCGTGAGGTATC 60.879 63.158 4.92 0.00 43.89 2.24
2297 2619 2.184322 CAGCACCGCGTGAGGTAT 59.816 61.111 4.92 0.00 43.89 2.73
2298 2620 4.735132 GCAGCACCGCGTGAGGTA 62.735 66.667 4.92 0.00 43.89 3.08
2306 2628 1.291877 CTAATATCCCGCAGCACCGC 61.292 60.000 0.00 0.00 0.00 5.68
2307 2629 0.033504 ACTAATATCCCGCAGCACCG 59.966 55.000 0.00 0.00 0.00 4.94
2308 2630 1.202651 ACACTAATATCCCGCAGCACC 60.203 52.381 0.00 0.00 0.00 5.01
2309 2631 1.867233 CACACTAATATCCCGCAGCAC 59.133 52.381 0.00 0.00 0.00 4.40
2310 2632 1.810031 GCACACTAATATCCCGCAGCA 60.810 52.381 0.00 0.00 0.00 4.41
2311 2633 0.868406 GCACACTAATATCCCGCAGC 59.132 55.000 0.00 0.00 0.00 5.25
2312 2634 2.238942 TGCACACTAATATCCCGCAG 57.761 50.000 0.00 0.00 0.00 5.18
2313 2635 2.700722 TTGCACACTAATATCCCGCA 57.299 45.000 0.00 0.00 0.00 5.69
2314 2636 3.435671 GGTATTGCACACTAATATCCCGC 59.564 47.826 0.00 0.00 0.00 6.13
2315 2637 3.678072 CGGTATTGCACACTAATATCCCG 59.322 47.826 0.00 0.00 0.00 5.14
2316 2638 4.451096 CACGGTATTGCACACTAATATCCC 59.549 45.833 0.00 0.00 0.00 3.85
2317 2639 5.294356 TCACGGTATTGCACACTAATATCC 58.706 41.667 0.00 0.00 0.00 2.59
2318 2640 6.838198 TTCACGGTATTGCACACTAATATC 57.162 37.500 0.00 0.00 0.00 1.63
2319 2641 9.502091 AATATTCACGGTATTGCACACTAATAT 57.498 29.630 0.00 0.00 0.00 1.28
2320 2642 8.896320 AATATTCACGGTATTGCACACTAATA 57.104 30.769 0.00 0.00 0.00 0.98
2321 2643 7.497579 TGAATATTCACGGTATTGCACACTAAT 59.502 33.333 14.23 0.00 31.01 1.73
2322 2644 6.819146 TGAATATTCACGGTATTGCACACTAA 59.181 34.615 14.23 0.00 31.01 2.24
2323 2645 6.342111 TGAATATTCACGGTATTGCACACTA 58.658 36.000 14.23 0.00 31.01 2.74
2324 2646 5.182487 TGAATATTCACGGTATTGCACACT 58.818 37.500 14.23 0.00 31.01 3.55
2325 2647 5.478233 TGAATATTCACGGTATTGCACAC 57.522 39.130 14.23 0.00 31.01 3.82
2326 2648 5.819901 TCATGAATATTCACGGTATTGCACA 59.180 36.000 20.19 0.00 40.49 4.57
2327 2649 6.299023 TCATGAATATTCACGGTATTGCAC 57.701 37.500 20.19 0.00 40.49 4.57
2328 2650 5.469760 CCTCATGAATATTCACGGTATTGCA 59.530 40.000 20.19 4.10 40.49 4.08
2329 2651 5.470098 ACCTCATGAATATTCACGGTATTGC 59.530 40.000 23.86 0.00 40.49 3.56
2330 2652 8.601845 TTACCTCATGAATATTCACGGTATTG 57.398 34.615 27.03 19.00 40.49 1.90
2331 2653 9.793259 ATTTACCTCATGAATATTCACGGTATT 57.207 29.630 27.03 20.06 40.49 1.89
2332 2654 9.793259 AATTTACCTCATGAATATTCACGGTAT 57.207 29.630 27.03 18.84 40.49 2.73
2333 2655 9.268268 GAATTTACCTCATGAATATTCACGGTA 57.732 33.333 24.88 24.88 40.49 4.02
2334 2656 7.993183 AGAATTTACCTCATGAATATTCACGGT 59.007 33.333 26.26 26.26 40.49 4.83
2335 2657 8.383318 AGAATTTACCTCATGAATATTCACGG 57.617 34.615 20.19 20.36 40.49 4.94
2336 2658 9.655769 CAAGAATTTACCTCATGAATATTCACG 57.344 33.333 20.19 12.79 40.49 4.35
2337 2659 9.956720 CCAAGAATTTACCTCATGAATATTCAC 57.043 33.333 20.19 3.54 40.49 3.18
2338 2660 9.919416 TCCAAGAATTTACCTCATGAATATTCA 57.081 29.630 20.07 20.07 42.14 2.57
2341 2663 9.305555 CCATCCAAGAATTTACCTCATGAATAT 57.694 33.333 0.00 0.00 0.00 1.28
2342 2664 8.281531 ACCATCCAAGAATTTACCTCATGAATA 58.718 33.333 0.00 0.00 0.00 1.75
2343 2665 7.069085 CACCATCCAAGAATTTACCTCATGAAT 59.931 37.037 0.00 0.00 0.00 2.57
2344 2666 6.377996 CACCATCCAAGAATTTACCTCATGAA 59.622 38.462 0.00 0.00 0.00 2.57
2345 2667 5.887598 CACCATCCAAGAATTTACCTCATGA 59.112 40.000 0.00 0.00 0.00 3.07
2346 2668 5.068198 CCACCATCCAAGAATTTACCTCATG 59.932 44.000 0.00 0.00 0.00 3.07
2347 2669 5.044179 TCCACCATCCAAGAATTTACCTCAT 60.044 40.000 0.00 0.00 0.00 2.90
2348 2670 4.290985 TCCACCATCCAAGAATTTACCTCA 59.709 41.667 0.00 0.00 0.00 3.86
2349 2671 4.855340 TCCACCATCCAAGAATTTACCTC 58.145 43.478 0.00 0.00 0.00 3.85
2350 2672 4.946160 TCCACCATCCAAGAATTTACCT 57.054 40.909 0.00 0.00 0.00 3.08
2351 2673 7.060421 TCTTATCCACCATCCAAGAATTTACC 58.940 38.462 0.00 0.00 0.00 2.85
2352 2674 7.993183 TCTCTTATCCACCATCCAAGAATTTAC 59.007 37.037 0.00 0.00 0.00 2.01
2353 2675 8.101309 TCTCTTATCCACCATCCAAGAATTTA 57.899 34.615 0.00 0.00 0.00 1.40
2354 2676 6.973642 TCTCTTATCCACCATCCAAGAATTT 58.026 36.000 0.00 0.00 0.00 1.82
2355 2677 6.581388 TCTCTTATCCACCATCCAAGAATT 57.419 37.500 0.00 0.00 0.00 2.17
2356 2678 6.776887 ATCTCTTATCCACCATCCAAGAAT 57.223 37.500 0.00 0.00 0.00 2.40
2357 2679 7.690454 TTATCTCTTATCCACCATCCAAGAA 57.310 36.000 0.00 0.00 0.00 2.52
2358 2680 7.690454 TTTATCTCTTATCCACCATCCAAGA 57.310 36.000 0.00 0.00 0.00 3.02
2359 2681 8.752005 TTTTTATCTCTTATCCACCATCCAAG 57.248 34.615 0.00 0.00 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.