Multiple sequence alignment - TraesCS2D01G059200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G059200 chr2D 100.000 2515 0 0 1 2515 24556013 24558527 0.000000e+00 4645.0
1 TraesCS2D01G059200 chr2D 89.496 476 35 12 1086 1553 33878286 33878754 2.790000e-164 588.0
2 TraesCS2D01G059200 chr2D 79.310 899 103 39 1637 2478 33878909 33879781 1.020000e-153 553.0
3 TraesCS2D01G059200 chr2D 93.333 60 2 1 1018 1075 417995726 417995785 1.240000e-13 87.9
4 TraesCS2D01G059200 chr2B 89.540 1195 75 25 1080 2251 40280541 40279374 0.000000e+00 1469.0
5 TraesCS2D01G059200 chr2B 81.588 1461 139 63 1086 2459 55913220 55914637 0.000000e+00 1088.0
6 TraesCS2D01G059200 chr2B 84.675 770 62 23 1086 1827 55923844 55924585 0.000000e+00 717.0
7 TraesCS2D01G059200 chr2B 90.476 126 5 5 1959 2079 55925014 55925137 2.590000e-35 159.0
8 TraesCS2D01G059200 chr2B 91.139 79 4 3 2276 2353 40279289 40279365 1.230000e-18 104.0
9 TraesCS2D01G059200 chr2A 82.184 1117 107 43 1086 2141 36672784 36671699 0.000000e+00 876.0
10 TraesCS2D01G059200 chr2A 81.802 1121 113 40 1198 2258 36742932 36744021 0.000000e+00 856.0
11 TraesCS2D01G059200 chr2A 86.852 540 52 15 1115 1640 27345037 27344503 1.000000e-163 586.0
12 TraesCS2D01G059200 chr2A 90.078 383 27 6 1714 2087 27344473 27344093 1.050000e-133 486.0
13 TraesCS2D01G059200 chr2A 87.755 98 7 2 938 1034 27345144 27345051 2.640000e-20 110.0
14 TraesCS2D01G059200 chr2A 98.077 52 1 0 1026 1077 683519452 683519503 9.580000e-15 91.6
15 TraesCS2D01G059200 chr5D 83.135 421 62 8 1086 1502 326369717 326370132 2.360000e-100 375.0
16 TraesCS2D01G059200 chr5D 98.214 56 1 0 975 1030 326369664 326369719 5.730000e-17 99.0
17 TraesCS2D01G059200 chr5B 81.560 423 62 12 1086 1502 378816119 378816531 4.010000e-88 335.0
18 TraesCS2D01G059200 chr5B 98.214 56 1 0 975 1030 378816066 378816121 5.730000e-17 99.0
19 TraesCS2D01G059200 chr4D 96.364 55 1 1 1021 1075 485525284 485525337 3.450000e-14 89.8
20 TraesCS2D01G059200 chr7D 90.909 66 5 1 1028 1092 152126096 152126031 1.240000e-13 87.9
21 TraesCS2D01G059200 chr6A 94.737 57 2 1 1018 1074 438580273 438580328 1.240000e-13 87.9
22 TraesCS2D01G059200 chr4A 94.737 57 2 1 1018 1074 45946799 45946854 1.240000e-13 87.9
23 TraesCS2D01G059200 chr1A 92.063 63 3 2 1017 1078 186714650 186714711 1.240000e-13 87.9
24 TraesCS2D01G059200 chr6D 90.769 65 4 2 1027 1091 326542405 326542343 4.460000e-13 86.1
25 TraesCS2D01G059200 chr6B 90.625 64 5 1 1028 1090 439078543 439078606 1.600000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G059200 chr2D 24556013 24558527 2514 False 4645.0 4645 100.000000 1 2515 1 chr2D.!!$F1 2514
1 TraesCS2D01G059200 chr2D 33878286 33879781 1495 False 570.5 588 84.403000 1086 2478 2 chr2D.!!$F3 1392
2 TraesCS2D01G059200 chr2B 40279374 40280541 1167 True 1469.0 1469 89.540000 1080 2251 1 chr2B.!!$R1 1171
3 TraesCS2D01G059200 chr2B 55913220 55914637 1417 False 1088.0 1088 81.588000 1086 2459 1 chr2B.!!$F2 1373
4 TraesCS2D01G059200 chr2B 55923844 55925137 1293 False 438.0 717 87.575500 1086 2079 2 chr2B.!!$F3 993
5 TraesCS2D01G059200 chr2A 36671699 36672784 1085 True 876.0 876 82.184000 1086 2141 1 chr2A.!!$R1 1055
6 TraesCS2D01G059200 chr2A 36742932 36744021 1089 False 856.0 856 81.802000 1198 2258 1 chr2A.!!$F1 1060
7 TraesCS2D01G059200 chr2A 27344093 27345144 1051 True 394.0 586 88.228333 938 2087 3 chr2A.!!$R2 1149

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
887 888 0.03254 CCTTGGCTGCACTTGTTTCC 59.967 55.0 0.5 0.0 0.0 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1777 1894 0.040958 CAACTCCGAAGCAAGCACAC 60.041 55.0 0.0 0.0 0.0 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 8.833231 TGTTTTGTTTTATGTTGTTTCCTTCA 57.167 26.923 0.00 0.00 0.00 3.02
52 53 9.442047 TGTTTTGTTTTATGTTGTTTCCTTCAT 57.558 25.926 0.00 0.00 0.00 2.57
53 54 9.701355 GTTTTGTTTTATGTTGTTTCCTTCATG 57.299 29.630 0.00 0.00 0.00 3.07
54 55 8.430801 TTTGTTTTATGTTGTTTCCTTCATGG 57.569 30.769 0.00 0.00 37.10 3.66
55 56 7.353414 TGTTTTATGTTGTTTCCTTCATGGA 57.647 32.000 0.00 0.00 44.51 3.41
56 57 7.961351 TGTTTTATGTTGTTTCCTTCATGGAT 58.039 30.769 0.00 0.00 45.68 3.41
57 58 8.428063 TGTTTTATGTTGTTTCCTTCATGGATT 58.572 29.630 0.00 0.00 45.68 3.01
58 59 9.271828 GTTTTATGTTGTTTCCTTCATGGATTT 57.728 29.630 0.00 0.00 45.68 2.17
59 60 9.844257 TTTTATGTTGTTTCCTTCATGGATTTT 57.156 25.926 0.00 0.00 45.68 1.82
60 61 9.844257 TTTATGTTGTTTCCTTCATGGATTTTT 57.156 25.926 0.00 0.00 45.68 1.94
125 126 8.597662 AAAATGTTCCTGAAATGTTCAAGATG 57.402 30.769 0.00 0.00 39.58 2.90
126 127 6.906157 ATGTTCCTGAAATGTTCAAGATGT 57.094 33.333 0.00 0.00 39.58 3.06
127 128 6.713762 TGTTCCTGAAATGTTCAAGATGTT 57.286 33.333 0.00 0.00 39.58 2.71
128 129 6.738114 TGTTCCTGAAATGTTCAAGATGTTC 58.262 36.000 0.00 0.00 39.58 3.18
129 130 5.611796 TCCTGAAATGTTCAAGATGTTCG 57.388 39.130 0.00 0.00 39.58 3.95
130 131 4.083324 TCCTGAAATGTTCAAGATGTTCGC 60.083 41.667 0.00 0.00 39.58 4.70
131 132 4.320421 CCTGAAATGTTCAAGATGTTCGCA 60.320 41.667 0.00 0.00 39.58 5.10
132 133 5.375417 TGAAATGTTCAAGATGTTCGCAT 57.625 34.783 0.00 0.00 37.34 4.73
133 134 5.771469 TGAAATGTTCAAGATGTTCGCATT 58.229 33.333 0.00 0.00 35.77 3.56
134 135 6.215121 TGAAATGTTCAAGATGTTCGCATTT 58.785 32.000 0.00 0.00 35.77 2.32
135 136 6.700960 TGAAATGTTCAAGATGTTCGCATTTT 59.299 30.769 0.00 0.00 35.77 1.82
136 137 6.695292 AATGTTCAAGATGTTCGCATTTTC 57.305 33.333 0.00 0.00 38.08 2.29
137 138 5.180367 TGTTCAAGATGTTCGCATTTTCA 57.820 34.783 0.00 0.00 38.08 2.69
138 139 5.214417 TGTTCAAGATGTTCGCATTTTCAG 58.786 37.500 0.00 0.00 38.08 3.02
139 140 4.424061 TCAAGATGTTCGCATTTTCAGG 57.576 40.909 0.00 0.00 38.08 3.86
140 141 4.071423 TCAAGATGTTCGCATTTTCAGGA 58.929 39.130 0.00 0.00 38.08 3.86
141 142 4.518590 TCAAGATGTTCGCATTTTCAGGAA 59.481 37.500 0.00 0.00 38.08 3.36
142 143 5.183713 TCAAGATGTTCGCATTTTCAGGAAT 59.816 36.000 0.00 0.00 38.08 3.01
143 144 5.649782 AGATGTTCGCATTTTCAGGAATT 57.350 34.783 0.00 0.00 38.08 2.17
144 145 6.029346 AGATGTTCGCATTTTCAGGAATTT 57.971 33.333 0.00 0.00 38.08 1.82
145 146 6.458210 AGATGTTCGCATTTTCAGGAATTTT 58.542 32.000 0.00 0.00 38.08 1.82
146 147 5.903764 TGTTCGCATTTTCAGGAATTTTG 57.096 34.783 0.00 0.00 0.00 2.44
147 148 5.355596 TGTTCGCATTTTCAGGAATTTTGT 58.644 33.333 0.00 0.00 0.00 2.83
148 149 5.814705 TGTTCGCATTTTCAGGAATTTTGTT 59.185 32.000 0.00 0.00 0.00 2.83
149 150 6.019156 TGTTCGCATTTTCAGGAATTTTGTTC 60.019 34.615 0.00 0.00 0.00 3.18
150 151 5.595885 TCGCATTTTCAGGAATTTTGTTCA 58.404 33.333 0.00 0.00 0.00 3.18
151 152 6.045318 TCGCATTTTCAGGAATTTTGTTCAA 58.955 32.000 0.00 0.00 0.00 2.69
152 153 6.536582 TCGCATTTTCAGGAATTTTGTTCAAA 59.463 30.769 0.00 0.00 0.00 2.69
153 154 7.226325 TCGCATTTTCAGGAATTTTGTTCAAAT 59.774 29.630 0.00 0.00 36.57 2.32
154 155 7.856894 CGCATTTTCAGGAATTTTGTTCAAATT 59.143 29.630 0.00 0.00 46.10 1.82
155 156 9.518906 GCATTTTCAGGAATTTTGTTCAAATTT 57.481 25.926 0.00 2.61 43.89 1.82
160 161 9.664332 TTCAGGAATTTTGTTCAAATTTTCAGA 57.336 25.926 16.03 10.40 43.89 3.27
161 162 9.664332 TCAGGAATTTTGTTCAAATTTTCAGAA 57.336 25.926 16.03 0.00 43.89 3.02
170 171 7.937704 TGTTCAAATTTTCAGAATTATTCGCG 58.062 30.769 0.00 0.00 34.02 5.87
171 172 7.593273 TGTTCAAATTTTCAGAATTATTCGCGT 59.407 29.630 5.77 0.00 34.02 6.01
172 173 8.424731 GTTCAAATTTTCAGAATTATTCGCGTT 58.575 29.630 5.77 0.00 34.02 4.84
173 174 8.514136 TCAAATTTTCAGAATTATTCGCGTTT 57.486 26.923 5.77 0.00 34.02 3.60
174 175 8.635124 TCAAATTTTCAGAATTATTCGCGTTTC 58.365 29.630 5.77 3.37 34.02 2.78
175 176 7.506296 AATTTTCAGAATTATTCGCGTTTCC 57.494 32.000 5.77 0.00 34.02 3.13
176 177 4.609691 TTCAGAATTATTCGCGTTTCCC 57.390 40.909 5.77 0.00 34.02 3.97
177 178 3.869065 TCAGAATTATTCGCGTTTCCCT 58.131 40.909 5.77 0.00 34.02 4.20
178 179 5.013568 TCAGAATTATTCGCGTTTCCCTA 57.986 39.130 5.77 0.00 34.02 3.53
179 180 5.421277 TCAGAATTATTCGCGTTTCCCTAA 58.579 37.500 5.77 0.00 34.02 2.69
180 181 6.053005 TCAGAATTATTCGCGTTTCCCTAAT 58.947 36.000 5.77 0.00 34.02 1.73
181 182 6.540914 TCAGAATTATTCGCGTTTCCCTAATT 59.459 34.615 5.77 7.80 34.02 1.40
182 183 7.066525 TCAGAATTATTCGCGTTTCCCTAATTT 59.933 33.333 5.77 0.00 34.02 1.82
183 184 7.700656 CAGAATTATTCGCGTTTCCCTAATTTT 59.299 33.333 5.77 1.49 34.02 1.82
184 185 7.700656 AGAATTATTCGCGTTTCCCTAATTTTG 59.299 33.333 5.77 0.00 34.02 2.44
185 186 4.776795 ATTCGCGTTTCCCTAATTTTGT 57.223 36.364 5.77 0.00 0.00 2.83
186 187 4.571372 TTCGCGTTTCCCTAATTTTGTT 57.429 36.364 5.77 0.00 0.00 2.83
187 188 4.149910 TCGCGTTTCCCTAATTTTGTTC 57.850 40.909 5.77 0.00 0.00 3.18
188 189 3.816523 TCGCGTTTCCCTAATTTTGTTCT 59.183 39.130 5.77 0.00 0.00 3.01
189 190 4.083696 TCGCGTTTCCCTAATTTTGTTCTC 60.084 41.667 5.77 0.00 0.00 2.87
190 191 4.156182 GCGTTTCCCTAATTTTGTTCTCG 58.844 43.478 0.00 0.00 0.00 4.04
191 192 4.156182 CGTTTCCCTAATTTTGTTCTCGC 58.844 43.478 0.00 0.00 0.00 5.03
192 193 4.083484 CGTTTCCCTAATTTTGTTCTCGCT 60.083 41.667 0.00 0.00 0.00 4.93
193 194 5.562113 CGTTTCCCTAATTTTGTTCTCGCTT 60.562 40.000 0.00 0.00 0.00 4.68
194 195 6.213677 GTTTCCCTAATTTTGTTCTCGCTTT 58.786 36.000 0.00 0.00 0.00 3.51
195 196 6.399639 TTCCCTAATTTTGTTCTCGCTTTT 57.600 33.333 0.00 0.00 0.00 2.27
196 197 6.009115 TCCCTAATTTTGTTCTCGCTTTTC 57.991 37.500 0.00 0.00 0.00 2.29
197 198 5.533154 TCCCTAATTTTGTTCTCGCTTTTCA 59.467 36.000 0.00 0.00 0.00 2.69
198 199 6.039941 TCCCTAATTTTGTTCTCGCTTTTCAA 59.960 34.615 0.00 0.00 0.00 2.69
199 200 6.868339 CCCTAATTTTGTTCTCGCTTTTCAAT 59.132 34.615 0.00 0.00 0.00 2.57
200 201 8.026607 CCCTAATTTTGTTCTCGCTTTTCAATA 58.973 33.333 0.00 0.00 0.00 1.90
201 202 9.405587 CCTAATTTTGTTCTCGCTTTTCAATAA 57.594 29.630 0.00 0.00 0.00 1.40
207 208 7.867445 TGTTCTCGCTTTTCAATAAAAATCC 57.133 32.000 0.00 0.00 36.30 3.01
208 209 7.429633 TGTTCTCGCTTTTCAATAAAAATCCA 58.570 30.769 0.00 0.00 36.30 3.41
209 210 8.087750 TGTTCTCGCTTTTCAATAAAAATCCAT 58.912 29.630 0.00 0.00 36.30 3.41
210 211 8.925700 GTTCTCGCTTTTCAATAAAAATCCATT 58.074 29.630 0.00 0.00 36.30 3.16
211 212 9.487790 TTCTCGCTTTTCAATAAAAATCCATTT 57.512 25.926 0.00 0.00 36.30 2.32
212 213 9.487790 TCTCGCTTTTCAATAAAAATCCATTTT 57.512 25.926 0.00 0.00 43.52 1.82
213 214 9.532697 CTCGCTTTTCAATAAAAATCCATTTTG 57.467 29.630 0.00 0.00 41.29 2.44
214 215 9.050601 TCGCTTTTCAATAAAAATCCATTTTGT 57.949 25.926 0.00 0.00 41.29 2.83
235 236 9.658799 TTTTGTAAGAAATGGTTGAAATGTTCA 57.341 25.926 0.00 0.00 38.04 3.18
236 237 9.658799 TTTGTAAGAAATGGTTGAAATGTTCAA 57.341 25.926 0.00 0.00 46.68 2.69
247 248 5.521906 TGAAATGTTCAAATTTCGGTGGA 57.478 34.783 5.47 0.00 45.55 4.02
248 249 5.285651 TGAAATGTTCAAATTTCGGTGGAC 58.714 37.500 5.47 0.00 45.55 4.02
249 250 5.068460 TGAAATGTTCAAATTTCGGTGGACT 59.932 36.000 5.47 0.00 45.55 3.85
250 251 5.529581 AATGTTCAAATTTCGGTGGACTT 57.470 34.783 0.00 0.00 0.00 3.01
251 252 4.993029 TGTTCAAATTTCGGTGGACTTT 57.007 36.364 0.00 0.00 0.00 2.66
252 253 5.331876 TGTTCAAATTTCGGTGGACTTTT 57.668 34.783 0.00 0.00 0.00 2.27
253 254 5.725362 TGTTCAAATTTCGGTGGACTTTTT 58.275 33.333 0.00 0.00 0.00 1.94
254 255 5.578727 TGTTCAAATTTCGGTGGACTTTTTG 59.421 36.000 0.00 0.00 0.00 2.44
255 256 5.584253 TCAAATTTCGGTGGACTTTTTGA 57.416 34.783 0.00 0.00 0.00 2.69
256 257 5.967088 TCAAATTTCGGTGGACTTTTTGAA 58.033 33.333 0.00 0.00 0.00 2.69
257 258 6.039616 TCAAATTTCGGTGGACTTTTTGAAG 58.960 36.000 0.00 0.00 0.00 3.02
258 259 5.592104 AATTTCGGTGGACTTTTTGAAGT 57.408 34.783 0.00 0.00 35.34 3.01
259 260 6.702716 AATTTCGGTGGACTTTTTGAAGTA 57.297 33.333 0.00 0.00 32.22 2.24
260 261 5.488645 TTTCGGTGGACTTTTTGAAGTAC 57.511 39.130 0.00 0.00 34.18 2.73
261 262 4.411256 TCGGTGGACTTTTTGAAGTACT 57.589 40.909 3.45 0.00 34.68 2.73
262 263 4.124238 TCGGTGGACTTTTTGAAGTACTG 58.876 43.478 0.00 0.30 34.68 2.74
263 264 3.875134 CGGTGGACTTTTTGAAGTACTGT 59.125 43.478 0.00 0.00 34.68 3.55
264 265 4.334481 CGGTGGACTTTTTGAAGTACTGTT 59.666 41.667 0.00 0.00 34.68 3.16
265 266 5.503520 CGGTGGACTTTTTGAAGTACTGTTC 60.504 44.000 0.00 0.00 34.68 3.18
266 267 5.499047 GTGGACTTTTTGAAGTACTGTTCG 58.501 41.667 0.00 0.00 34.68 3.95
267 268 5.064325 GTGGACTTTTTGAAGTACTGTTCGT 59.936 40.000 0.00 0.00 34.68 3.85
268 269 5.644636 TGGACTTTTTGAAGTACTGTTCGTT 59.355 36.000 0.00 0.00 34.68 3.85
269 270 6.149807 TGGACTTTTTGAAGTACTGTTCGTTT 59.850 34.615 0.00 0.00 34.68 3.60
270 271 7.025365 GGACTTTTTGAAGTACTGTTCGTTTT 58.975 34.615 0.00 0.00 32.22 2.43
271 272 7.539710 GGACTTTTTGAAGTACTGTTCGTTTTT 59.460 33.333 0.00 0.00 32.22 1.94
272 273 8.222984 ACTTTTTGAAGTACTGTTCGTTTTTG 57.777 30.769 0.00 0.00 0.00 2.44
273 274 7.863877 ACTTTTTGAAGTACTGTTCGTTTTTGT 59.136 29.630 0.00 0.00 0.00 2.83
274 275 8.576936 TTTTTGAAGTACTGTTCGTTTTTGTT 57.423 26.923 0.00 0.00 0.00 2.83
275 276 7.784790 TTTGAAGTACTGTTCGTTTTTGTTC 57.215 32.000 0.00 0.00 0.00 3.18
276 277 6.730960 TGAAGTACTGTTCGTTTTTGTTCT 57.269 33.333 0.00 0.00 0.00 3.01
277 278 7.136289 TGAAGTACTGTTCGTTTTTGTTCTT 57.864 32.000 0.00 0.00 0.00 2.52
278 279 7.586747 TGAAGTACTGTTCGTTTTTGTTCTTT 58.413 30.769 0.00 0.00 0.00 2.52
279 280 7.747357 TGAAGTACTGTTCGTTTTTGTTCTTTC 59.253 33.333 0.00 0.00 0.00 2.62
280 281 7.136289 AGTACTGTTCGTTTTTGTTCTTTCA 57.864 32.000 0.00 0.00 0.00 2.69
281 282 7.758495 AGTACTGTTCGTTTTTGTTCTTTCAT 58.242 30.769 0.00 0.00 0.00 2.57
282 283 8.885722 AGTACTGTTCGTTTTTGTTCTTTCATA 58.114 29.630 0.00 0.00 0.00 2.15
283 284 9.493206 GTACTGTTCGTTTTTGTTCTTTCATAA 57.507 29.630 0.00 0.00 0.00 1.90
284 285 8.973835 ACTGTTCGTTTTTGTTCTTTCATAAA 57.026 26.923 0.00 0.00 0.00 1.40
285 286 9.413048 ACTGTTCGTTTTTGTTCTTTCATAAAA 57.587 25.926 0.00 0.00 0.00 1.52
373 374 8.703604 TTAACACACATTTTTCGGATTTTTCA 57.296 26.923 0.00 0.00 0.00 2.69
374 375 7.602517 AACACACATTTTTCGGATTTTTCAA 57.397 28.000 0.00 0.00 0.00 2.69
375 376 7.602517 ACACACATTTTTCGGATTTTTCAAA 57.397 28.000 0.00 0.00 0.00 2.69
376 377 8.034058 ACACACATTTTTCGGATTTTTCAAAA 57.966 26.923 0.00 0.00 0.00 2.44
377 378 8.507249 ACACACATTTTTCGGATTTTTCAAAAA 58.493 25.926 0.00 0.00 33.46 1.94
434 435 8.437360 AAAACAGAATTTCAGAAAATGTTCCC 57.563 30.769 17.93 0.00 35.27 3.97
435 436 6.729690 ACAGAATTTCAGAAAATGTTCCCA 57.270 33.333 0.00 0.00 35.27 4.37
436 437 6.752168 ACAGAATTTCAGAAAATGTTCCCAG 58.248 36.000 0.00 0.00 35.27 4.45
437 438 6.161381 CAGAATTTCAGAAAATGTTCCCAGG 58.839 40.000 0.00 0.00 35.27 4.45
438 439 5.840693 AGAATTTCAGAAAATGTTCCCAGGT 59.159 36.000 0.00 0.00 35.27 4.00
439 440 6.327365 AGAATTTCAGAAAATGTTCCCAGGTT 59.673 34.615 0.00 0.00 35.27 3.50
440 441 5.948742 TTTCAGAAAATGTTCCCAGGTTT 57.051 34.783 0.00 0.00 33.92 3.27
441 442 7.610580 ATTTCAGAAAATGTTCCCAGGTTTA 57.389 32.000 0.00 0.00 33.78 2.01
442 443 7.425224 TTTCAGAAAATGTTCCCAGGTTTAA 57.575 32.000 0.00 0.00 33.92 1.52
443 444 7.425224 TTCAGAAAATGTTCCCAGGTTTAAA 57.575 32.000 0.00 0.00 33.92 1.52
444 445 7.425224 TCAGAAAATGTTCCCAGGTTTAAAA 57.575 32.000 0.00 0.00 33.92 1.52
445 446 7.852263 TCAGAAAATGTTCCCAGGTTTAAAAA 58.148 30.769 0.00 0.00 33.92 1.94
530 531 7.849322 AAAAGATAGAAAAGGCTAAAACCCA 57.151 32.000 0.00 0.00 0.00 4.51
531 532 7.849322 AAAGATAGAAAAGGCTAAAACCCAA 57.151 32.000 0.00 0.00 0.00 4.12
532 533 6.835819 AGATAGAAAAGGCTAAAACCCAAC 57.164 37.500 0.00 0.00 0.00 3.77
533 534 6.311735 AGATAGAAAAGGCTAAAACCCAACA 58.688 36.000 0.00 0.00 0.00 3.33
534 535 6.780522 AGATAGAAAAGGCTAAAACCCAACAA 59.219 34.615 0.00 0.00 0.00 2.83
535 536 5.685520 AGAAAAGGCTAAAACCCAACAAA 57.314 34.783 0.00 0.00 0.00 2.83
536 537 6.056090 AGAAAAGGCTAAAACCCAACAAAA 57.944 33.333 0.00 0.00 0.00 2.44
537 538 5.878116 AGAAAAGGCTAAAACCCAACAAAAC 59.122 36.000 0.00 0.00 0.00 2.43
538 539 3.446310 AGGCTAAAACCCAACAAAACG 57.554 42.857 0.00 0.00 0.00 3.60
539 540 3.025262 AGGCTAAAACCCAACAAAACGA 58.975 40.909 0.00 0.00 0.00 3.85
540 541 3.117794 GGCTAAAACCCAACAAAACGAC 58.882 45.455 0.00 0.00 0.00 4.34
541 542 3.429135 GGCTAAAACCCAACAAAACGACA 60.429 43.478 0.00 0.00 0.00 4.35
542 543 3.794564 GCTAAAACCCAACAAAACGACAG 59.205 43.478 0.00 0.00 0.00 3.51
543 544 2.951457 AAACCCAACAAAACGACAGG 57.049 45.000 0.00 0.00 0.00 4.00
544 545 1.107945 AACCCAACAAAACGACAGGG 58.892 50.000 0.00 0.00 42.07 4.45
545 546 0.753848 ACCCAACAAAACGACAGGGG 60.754 55.000 0.00 0.00 40.64 4.79
546 547 0.466555 CCCAACAAAACGACAGGGGA 60.467 55.000 0.00 0.00 36.14 4.81
547 548 1.394618 CCAACAAAACGACAGGGGAA 58.605 50.000 0.00 0.00 0.00 3.97
548 549 1.751924 CCAACAAAACGACAGGGGAAA 59.248 47.619 0.00 0.00 0.00 3.13
549 550 2.166664 CCAACAAAACGACAGGGGAAAA 59.833 45.455 0.00 0.00 0.00 2.29
550 551 3.368531 CCAACAAAACGACAGGGGAAAAA 60.369 43.478 0.00 0.00 0.00 1.94
568 569 4.483476 AAAAATGGCAGTACGTCACTTC 57.517 40.909 0.00 0.00 34.26 3.01
569 570 3.402628 AAATGGCAGTACGTCACTTCT 57.597 42.857 0.00 0.00 34.26 2.85
570 571 3.402628 AATGGCAGTACGTCACTTCTT 57.597 42.857 0.00 0.00 34.26 2.52
571 572 2.148916 TGGCAGTACGTCACTTCTTG 57.851 50.000 0.00 0.00 34.26 3.02
572 573 1.411246 TGGCAGTACGTCACTTCTTGT 59.589 47.619 0.00 0.00 34.26 3.16
573 574 2.624364 TGGCAGTACGTCACTTCTTGTA 59.376 45.455 0.00 0.00 34.26 2.41
574 575 2.985139 GGCAGTACGTCACTTCTTGTAC 59.015 50.000 0.00 0.00 34.26 2.90
575 576 2.985139 GCAGTACGTCACTTCTTGTACC 59.015 50.000 0.00 0.00 38.31 3.34
576 577 3.231965 CAGTACGTCACTTCTTGTACCG 58.768 50.000 0.00 0.00 38.31 4.02
577 578 2.880890 AGTACGTCACTTCTTGTACCGT 59.119 45.455 0.00 0.00 38.31 4.83
578 579 4.065088 AGTACGTCACTTCTTGTACCGTA 58.935 43.478 0.00 0.00 38.31 4.02
579 580 3.549299 ACGTCACTTCTTGTACCGTAG 57.451 47.619 0.00 0.00 34.09 3.51
580 581 2.248487 CGTCACTTCTTGTACCGTAGC 58.752 52.381 0.00 0.00 0.00 3.58
581 582 2.603953 GTCACTTCTTGTACCGTAGCC 58.396 52.381 0.00 0.00 0.00 3.93
582 583 2.230750 GTCACTTCTTGTACCGTAGCCT 59.769 50.000 0.00 0.00 0.00 4.58
583 584 3.441572 GTCACTTCTTGTACCGTAGCCTA 59.558 47.826 0.00 0.00 0.00 3.93
584 585 4.081406 TCACTTCTTGTACCGTAGCCTAA 58.919 43.478 0.00 0.00 0.00 2.69
585 586 4.523943 TCACTTCTTGTACCGTAGCCTAAA 59.476 41.667 0.00 0.00 0.00 1.85
586 587 5.010922 TCACTTCTTGTACCGTAGCCTAAAA 59.989 40.000 0.00 0.00 0.00 1.52
587 588 5.873164 CACTTCTTGTACCGTAGCCTAAAAT 59.127 40.000 0.00 0.00 0.00 1.82
588 589 5.873164 ACTTCTTGTACCGTAGCCTAAAATG 59.127 40.000 0.00 0.00 0.00 2.32
589 590 4.761975 TCTTGTACCGTAGCCTAAAATGG 58.238 43.478 0.00 0.00 0.00 3.16
590 591 3.547054 TGTACCGTAGCCTAAAATGGG 57.453 47.619 0.00 0.00 0.00 4.00
596 597 3.536917 GCCTAAAATGGGCCGGCC 61.537 66.667 38.57 38.57 43.49 6.13
609 610 4.547367 CGGCCCAATCGGACCTCC 62.547 72.222 0.00 0.00 35.34 4.30
610 611 4.191015 GGCCCAATCGGACCTCCC 62.191 72.222 0.00 0.00 30.37 4.30
611 612 3.090532 GCCCAATCGGACCTCCCT 61.091 66.667 0.00 0.00 0.00 4.20
612 613 2.911143 CCCAATCGGACCTCCCTG 59.089 66.667 0.00 0.00 0.00 4.45
613 614 1.995626 CCCAATCGGACCTCCCTGT 60.996 63.158 0.00 0.00 0.00 4.00
614 615 1.562672 CCCAATCGGACCTCCCTGTT 61.563 60.000 0.00 0.00 0.00 3.16
615 616 0.107654 CCAATCGGACCTCCCTGTTC 60.108 60.000 0.00 0.00 0.00 3.18
616 617 0.460284 CAATCGGACCTCCCTGTTCG 60.460 60.000 0.00 0.00 38.62 3.95
617 618 0.903454 AATCGGACCTCCCTGTTCGT 60.903 55.000 0.00 0.00 38.41 3.85
618 619 1.321074 ATCGGACCTCCCTGTTCGTC 61.321 60.000 0.00 0.00 38.41 4.20
619 620 2.572284 GGACCTCCCTGTTCGTCG 59.428 66.667 0.00 0.00 0.00 5.12
620 621 2.126031 GACCTCCCTGTTCGTCGC 60.126 66.667 0.00 0.00 0.00 5.19
621 622 3.644399 GACCTCCCTGTTCGTCGCC 62.644 68.421 0.00 0.00 0.00 5.54
622 623 4.452733 CCTCCCTGTTCGTCGCCC 62.453 72.222 0.00 0.00 0.00 6.13
623 624 3.382832 CTCCCTGTTCGTCGCCCT 61.383 66.667 0.00 0.00 0.00 5.19
624 625 3.649277 CTCCCTGTTCGTCGCCCTG 62.649 68.421 0.00 0.00 0.00 4.45
625 626 4.003788 CCCTGTTCGTCGCCCTGT 62.004 66.667 0.00 0.00 0.00 4.00
626 627 2.432628 CCTGTTCGTCGCCCTGTC 60.433 66.667 0.00 0.00 0.00 3.51
627 628 2.651361 CTGTTCGTCGCCCTGTCT 59.349 61.111 0.00 0.00 0.00 3.41
628 629 1.592400 CCTGTTCGTCGCCCTGTCTA 61.592 60.000 0.00 0.00 0.00 2.59
629 630 0.456221 CTGTTCGTCGCCCTGTCTAT 59.544 55.000 0.00 0.00 0.00 1.98
630 631 0.892755 TGTTCGTCGCCCTGTCTATT 59.107 50.000 0.00 0.00 0.00 1.73
631 632 1.274167 TGTTCGTCGCCCTGTCTATTT 59.726 47.619 0.00 0.00 0.00 1.40
632 633 1.659098 GTTCGTCGCCCTGTCTATTTG 59.341 52.381 0.00 0.00 0.00 2.32
633 634 1.179152 TCGTCGCCCTGTCTATTTGA 58.821 50.000 0.00 0.00 0.00 2.69
634 635 1.135199 TCGTCGCCCTGTCTATTTGAC 60.135 52.381 0.00 0.00 45.54 3.18
644 645 3.261981 GTCTATTTGACACATCCCGGT 57.738 47.619 0.00 0.00 44.73 5.28
645 646 3.195661 GTCTATTTGACACATCCCGGTC 58.804 50.000 0.00 0.00 44.73 4.79
646 647 2.169769 TCTATTTGACACATCCCGGTCC 59.830 50.000 0.00 0.00 33.09 4.46
647 648 0.695924 ATTTGACACATCCCGGTCCA 59.304 50.000 0.00 0.00 33.09 4.02
648 649 0.036164 TTTGACACATCCCGGTCCAG 59.964 55.000 0.00 0.00 33.09 3.86
649 650 0.834261 TTGACACATCCCGGTCCAGA 60.834 55.000 0.00 0.00 33.09 3.86
650 651 0.834261 TGACACATCCCGGTCCAGAA 60.834 55.000 0.00 0.00 33.09 3.02
651 652 0.323629 GACACATCCCGGTCCAGAAA 59.676 55.000 0.00 0.00 0.00 2.52
652 653 0.768622 ACACATCCCGGTCCAGAAAA 59.231 50.000 0.00 0.00 0.00 2.29
653 654 1.144093 ACACATCCCGGTCCAGAAAAA 59.856 47.619 0.00 0.00 0.00 1.94
672 673 3.804900 AAAAAGGTTTCGTCCCCGA 57.195 47.368 0.00 0.00 42.41 5.14
673 674 2.281539 AAAAAGGTTTCGTCCCCGAT 57.718 45.000 0.00 0.00 43.80 4.18
674 675 2.281539 AAAAGGTTTCGTCCCCGATT 57.718 45.000 0.00 0.00 43.80 3.34
675 676 1.817357 AAAGGTTTCGTCCCCGATTC 58.183 50.000 0.00 0.00 43.80 2.52
676 677 0.035725 AAGGTTTCGTCCCCGATTCC 60.036 55.000 0.00 0.00 43.80 3.01
677 678 1.196104 AGGTTTCGTCCCCGATTCCA 61.196 55.000 0.00 0.00 43.80 3.53
678 679 1.022982 GGTTTCGTCCCCGATTCCAC 61.023 60.000 0.00 0.00 43.80 4.02
679 680 0.036671 GTTTCGTCCCCGATTCCACT 60.037 55.000 0.00 0.00 43.80 4.00
680 681 0.036765 TTTCGTCCCCGATTCCACTG 60.037 55.000 0.00 0.00 43.80 3.66
681 682 1.895020 TTCGTCCCCGATTCCACTGG 61.895 60.000 0.00 0.00 43.80 4.00
682 683 2.355986 CGTCCCCGATTCCACTGGA 61.356 63.158 0.00 0.00 35.63 3.86
683 684 1.522569 GTCCCCGATTCCACTGGAG 59.477 63.158 0.00 0.00 31.21 3.86
684 685 1.689233 TCCCCGATTCCACTGGAGG 60.689 63.158 0.00 0.00 31.21 4.30
685 686 2.746375 CCCCGATTCCACTGGAGGG 61.746 68.421 12.35 12.35 35.28 4.30
686 687 2.746375 CCCGATTCCACTGGAGGGG 61.746 68.421 11.67 12.73 32.81 4.79
687 688 2.190578 CGATTCCACTGGAGGGGC 59.809 66.667 0.00 0.00 31.21 5.80
688 689 2.190578 GATTCCACTGGAGGGGCG 59.809 66.667 0.00 0.00 31.21 6.13
689 690 2.610859 ATTCCACTGGAGGGGCGT 60.611 61.111 0.00 0.00 31.21 5.68
690 691 2.876368 GATTCCACTGGAGGGGCGTG 62.876 65.000 0.00 0.00 31.21 5.34
697 698 4.603946 GGAGGGGCGTGCGGTATC 62.604 72.222 0.00 0.00 0.00 2.24
698 699 3.537874 GAGGGGCGTGCGGTATCT 61.538 66.667 0.00 0.00 0.00 1.98
699 700 3.081409 AGGGGCGTGCGGTATCTT 61.081 61.111 0.00 0.00 0.00 2.40
700 701 2.588034 GGGGCGTGCGGTATCTTC 60.588 66.667 0.00 0.00 0.00 2.87
701 702 2.499685 GGGCGTGCGGTATCTTCT 59.500 61.111 0.00 0.00 0.00 2.85
702 703 1.591863 GGGCGTGCGGTATCTTCTC 60.592 63.158 0.00 0.00 0.00 2.87
703 704 1.591863 GGCGTGCGGTATCTTCTCC 60.592 63.158 0.00 0.00 0.00 3.71
704 705 1.437986 GCGTGCGGTATCTTCTCCT 59.562 57.895 0.00 0.00 0.00 3.69
705 706 0.872021 GCGTGCGGTATCTTCTCCTG 60.872 60.000 0.00 0.00 0.00 3.86
706 707 0.872021 CGTGCGGTATCTTCTCCTGC 60.872 60.000 0.00 0.00 0.00 4.85
707 708 0.872021 GTGCGGTATCTTCTCCTGCG 60.872 60.000 0.00 0.00 0.00 5.18
708 709 1.035385 TGCGGTATCTTCTCCTGCGA 61.035 55.000 0.00 0.00 0.00 5.10
709 710 0.595310 GCGGTATCTTCTCCTGCGAC 60.595 60.000 0.00 0.00 0.00 5.19
710 711 0.317103 CGGTATCTTCTCCTGCGACG 60.317 60.000 0.00 0.00 0.00 5.12
711 712 0.595310 GGTATCTTCTCCTGCGACGC 60.595 60.000 14.19 14.19 0.00 5.19
712 713 0.930742 GTATCTTCTCCTGCGACGCG 60.931 60.000 16.14 3.53 0.00 6.01
747 748 4.821589 CCGGCGTGCTCTTCCTCC 62.822 72.222 6.01 0.00 0.00 4.30
748 749 4.821589 CGGCGTGCTCTTCCTCCC 62.822 72.222 0.00 0.00 0.00 4.30
749 750 4.475135 GGCGTGCTCTTCCTCCCC 62.475 72.222 0.00 0.00 0.00 4.81
750 751 4.475135 GCGTGCTCTTCCTCCCCC 62.475 72.222 0.00 0.00 0.00 5.40
751 752 4.148825 CGTGCTCTTCCTCCCCCG 62.149 72.222 0.00 0.00 0.00 5.73
752 753 3.787001 GTGCTCTTCCTCCCCCGG 61.787 72.222 0.00 0.00 0.00 5.73
755 756 4.806339 CTCTTCCTCCCCCGGCCT 62.806 72.222 0.00 0.00 0.00 5.19
756 757 4.348495 TCTTCCTCCCCCGGCCTT 62.348 66.667 0.00 0.00 0.00 4.35
757 758 3.798511 CTTCCTCCCCCGGCCTTC 61.799 72.222 0.00 0.00 0.00 3.46
758 759 4.348495 TTCCTCCCCCGGCCTTCT 62.348 66.667 0.00 0.00 0.00 2.85
759 760 4.798682 TCCTCCCCCGGCCTTCTC 62.799 72.222 0.00 0.00 0.00 2.87
760 761 4.806339 CCTCCCCCGGCCTTCTCT 62.806 72.222 0.00 0.00 0.00 3.10
761 762 3.157949 CTCCCCCGGCCTTCTCTC 61.158 72.222 0.00 0.00 0.00 3.20
762 763 4.798682 TCCCCCGGCCTTCTCTCC 62.799 72.222 0.00 0.00 0.00 3.71
779 780 3.885521 CGGAGGTACCTCGACGCC 61.886 72.222 31.00 19.09 43.59 5.68
780 781 3.885521 GGAGGTACCTCGACGCCG 61.886 72.222 31.00 0.00 43.59 6.46
781 782 4.549516 GAGGTACCTCGACGCCGC 62.550 72.222 25.83 1.42 33.06 6.53
810 811 3.726517 CGCCACCACGCCTTCTTG 61.727 66.667 0.00 0.00 0.00 3.02
811 812 2.281484 GCCACCACGCCTTCTTGA 60.281 61.111 0.00 0.00 0.00 3.02
812 813 1.675641 GCCACCACGCCTTCTTGAT 60.676 57.895 0.00 0.00 0.00 2.57
813 814 1.244019 GCCACCACGCCTTCTTGATT 61.244 55.000 0.00 0.00 0.00 2.57
814 815 1.247567 CCACCACGCCTTCTTGATTT 58.752 50.000 0.00 0.00 0.00 2.17
815 816 1.613437 CCACCACGCCTTCTTGATTTT 59.387 47.619 0.00 0.00 0.00 1.82
816 817 2.035832 CCACCACGCCTTCTTGATTTTT 59.964 45.455 0.00 0.00 0.00 1.94
861 862 2.825836 CCCTGGCGTGCCTGAATC 60.826 66.667 18.13 0.00 37.23 2.52
862 863 2.825836 CCTGGCGTGCCTGAATCC 60.826 66.667 18.13 0.00 37.23 3.01
863 864 2.270205 CTGGCGTGCCTGAATCCT 59.730 61.111 12.84 0.00 37.23 3.24
864 865 1.377725 CTGGCGTGCCTGAATCCTT 60.378 57.895 12.84 0.00 37.23 3.36
865 866 0.962356 CTGGCGTGCCTGAATCCTTT 60.962 55.000 12.84 0.00 37.23 3.11
866 867 0.960364 TGGCGTGCCTGAATCCTTTC 60.960 55.000 12.84 0.00 36.94 2.62
867 868 0.960364 GGCGTGCCTGAATCCTTTCA 60.960 55.000 2.98 0.00 39.54 2.69
868 869 0.169009 GCGTGCCTGAATCCTTTCAC 59.831 55.000 0.00 0.00 36.94 3.18
869 870 0.804989 CGTGCCTGAATCCTTTCACC 59.195 55.000 0.00 0.00 36.94 4.02
870 871 1.611673 CGTGCCTGAATCCTTTCACCT 60.612 52.381 0.00 0.00 36.94 4.00
871 872 2.519013 GTGCCTGAATCCTTTCACCTT 58.481 47.619 0.00 0.00 36.94 3.50
872 873 2.229784 GTGCCTGAATCCTTTCACCTTG 59.770 50.000 0.00 0.00 36.94 3.61
873 874 1.821136 GCCTGAATCCTTTCACCTTGG 59.179 52.381 0.00 0.00 36.94 3.61
874 875 1.821136 CCTGAATCCTTTCACCTTGGC 59.179 52.381 0.00 0.00 36.94 4.52
875 876 2.556114 CCTGAATCCTTTCACCTTGGCT 60.556 50.000 0.00 0.00 36.94 4.75
876 877 2.490903 CTGAATCCTTTCACCTTGGCTG 59.509 50.000 0.00 0.00 36.94 4.85
877 878 1.203287 GAATCCTTTCACCTTGGCTGC 59.797 52.381 0.00 0.00 0.00 5.25
878 879 0.112995 ATCCTTTCACCTTGGCTGCA 59.887 50.000 0.50 0.00 0.00 4.41
879 880 0.823356 TCCTTTCACCTTGGCTGCAC 60.823 55.000 0.50 0.00 0.00 4.57
880 881 0.825010 CCTTTCACCTTGGCTGCACT 60.825 55.000 0.50 0.00 0.00 4.40
881 882 1.035139 CTTTCACCTTGGCTGCACTT 58.965 50.000 0.50 0.00 0.00 3.16
882 883 0.746063 TTTCACCTTGGCTGCACTTG 59.254 50.000 0.50 0.00 0.00 3.16
883 884 0.395586 TTCACCTTGGCTGCACTTGT 60.396 50.000 0.50 0.00 0.00 3.16
884 885 0.395586 TCACCTTGGCTGCACTTGTT 60.396 50.000 0.50 0.00 0.00 2.83
885 886 0.461135 CACCTTGGCTGCACTTGTTT 59.539 50.000 0.50 0.00 0.00 2.83
886 887 0.746659 ACCTTGGCTGCACTTGTTTC 59.253 50.000 0.50 0.00 0.00 2.78
887 888 0.032540 CCTTGGCTGCACTTGTTTCC 59.967 55.000 0.50 0.00 0.00 3.13
888 889 1.035139 CTTGGCTGCACTTGTTTCCT 58.965 50.000 0.50 0.00 0.00 3.36
889 890 0.746063 TTGGCTGCACTTGTTTCCTG 59.254 50.000 0.50 0.00 0.00 3.86
890 891 0.106769 TGGCTGCACTTGTTTCCTGA 60.107 50.000 0.50 0.00 0.00 3.86
891 892 1.032014 GGCTGCACTTGTTTCCTGAA 58.968 50.000 0.50 0.00 0.00 3.02
892 893 1.000938 GGCTGCACTTGTTTCCTGAAG 60.001 52.381 0.50 0.00 0.00 3.02
893 894 1.949525 GCTGCACTTGTTTCCTGAAGA 59.050 47.619 0.00 0.00 0.00 2.87
894 895 2.358898 GCTGCACTTGTTTCCTGAAGAA 59.641 45.455 0.00 0.00 0.00 2.52
895 896 3.549625 GCTGCACTTGTTTCCTGAAGAAG 60.550 47.826 0.00 0.00 42.63 2.85
896 897 3.879295 CTGCACTTGTTTCCTGAAGAAGA 59.121 43.478 3.13 0.00 40.17 2.87
897 898 4.269183 TGCACTTGTTTCCTGAAGAAGAA 58.731 39.130 3.13 0.00 40.17 2.52
898 899 4.336433 TGCACTTGTTTCCTGAAGAAGAAG 59.664 41.667 3.13 0.00 40.17 2.85
899 900 4.576463 GCACTTGTTTCCTGAAGAAGAAGA 59.424 41.667 3.13 0.00 40.17 2.87
900 901 5.066505 GCACTTGTTTCCTGAAGAAGAAGAA 59.933 40.000 3.13 0.00 40.17 2.52
901 902 6.404734 GCACTTGTTTCCTGAAGAAGAAGAAA 60.405 38.462 3.13 0.00 40.17 2.52
902 903 7.538575 CACTTGTTTCCTGAAGAAGAAGAAAA 58.461 34.615 3.13 0.00 40.17 2.29
903 904 8.028938 CACTTGTTTCCTGAAGAAGAAGAAAAA 58.971 33.333 3.13 0.00 40.17 1.94
920 921 3.366052 AAAAATACTGTCGCCATCCCT 57.634 42.857 0.00 0.00 0.00 4.20
921 922 4.497291 AAAAATACTGTCGCCATCCCTA 57.503 40.909 0.00 0.00 0.00 3.53
922 923 3.470645 AAATACTGTCGCCATCCCTAC 57.529 47.619 0.00 0.00 0.00 3.18
923 924 1.339097 ATACTGTCGCCATCCCTACC 58.661 55.000 0.00 0.00 0.00 3.18
924 925 0.260816 TACTGTCGCCATCCCTACCT 59.739 55.000 0.00 0.00 0.00 3.08
925 926 0.260816 ACTGTCGCCATCCCTACCTA 59.739 55.000 0.00 0.00 0.00 3.08
926 927 0.962489 CTGTCGCCATCCCTACCTAG 59.038 60.000 0.00 0.00 0.00 3.02
927 928 1.113517 TGTCGCCATCCCTACCTAGC 61.114 60.000 0.00 0.00 0.00 3.42
928 929 0.828343 GTCGCCATCCCTACCTAGCT 60.828 60.000 0.00 0.00 0.00 3.32
929 930 0.105658 TCGCCATCCCTACCTAGCTT 60.106 55.000 0.00 0.00 0.00 3.74
930 931 1.146359 TCGCCATCCCTACCTAGCTTA 59.854 52.381 0.00 0.00 0.00 3.09
931 932 1.546476 CGCCATCCCTACCTAGCTTAG 59.454 57.143 0.00 0.00 0.00 2.18
932 933 1.276705 GCCATCCCTACCTAGCTTAGC 59.723 57.143 0.00 0.00 0.00 3.09
933 934 2.896039 CCATCCCTACCTAGCTTAGCT 58.104 52.381 12.67 12.67 43.41 3.32
934 935 3.243724 CCATCCCTACCTAGCTTAGCTT 58.756 50.000 13.44 0.00 40.44 3.74
935 936 4.417437 CCATCCCTACCTAGCTTAGCTTA 58.583 47.826 13.44 0.00 40.44 3.09
936 937 4.221041 CCATCCCTACCTAGCTTAGCTTAC 59.779 50.000 13.44 0.00 40.44 2.34
948 949 8.422566 CCTAGCTTAGCTTACAAGGTTAATACT 58.577 37.037 13.44 0.00 40.44 2.12
986 987 0.883833 CATCGCCCAGCTGAAAGTTT 59.116 50.000 17.39 0.00 35.30 2.66
990 991 1.197721 CGCCCAGCTGAAAGTTTACAG 59.802 52.381 17.39 9.42 35.30 2.74
1023 1024 0.179034 GGGCTCCTGGTCATGCTAAG 60.179 60.000 0.00 0.00 0.00 2.18
1030 1031 3.451178 TCCTGGTCATGCTAAGAAGGTAC 59.549 47.826 0.00 0.00 0.00 3.34
1032 1033 4.442192 CCTGGTCATGCTAAGAAGGTACTC 60.442 50.000 0.00 0.00 38.49 2.59
1033 1034 3.451178 TGGTCATGCTAAGAAGGTACTCC 59.549 47.826 0.00 0.00 38.49 3.85
1034 1035 3.181464 GGTCATGCTAAGAAGGTACTCCC 60.181 52.174 0.00 0.00 38.49 4.30
1036 1037 3.961408 TCATGCTAAGAAGGTACTCCCTC 59.039 47.826 0.00 0.00 45.47 4.30
1037 1038 2.748388 TGCTAAGAAGGTACTCCCTCC 58.252 52.381 0.00 0.00 45.47 4.30
1038 1039 2.043939 TGCTAAGAAGGTACTCCCTCCA 59.956 50.000 0.00 0.00 45.47 3.86
1039 1040 3.310193 GCTAAGAAGGTACTCCCTCCAT 58.690 50.000 0.00 0.00 45.47 3.41
1040 1041 3.712218 GCTAAGAAGGTACTCCCTCCATT 59.288 47.826 0.00 0.00 45.47 3.16
1041 1042 4.202274 GCTAAGAAGGTACTCCCTCCATTC 60.202 50.000 0.00 0.00 45.47 2.67
1042 1043 2.765502 AGAAGGTACTCCCTCCATTCC 58.234 52.381 0.00 0.00 45.47 3.01
1043 1044 2.045885 AGAAGGTACTCCCTCCATTCCA 59.954 50.000 0.00 0.00 45.47 3.53
1044 1045 2.661176 AGGTACTCCCTCCATTCCAA 57.339 50.000 0.00 0.00 40.71 3.53
1045 1046 2.929301 AGGTACTCCCTCCATTCCAAA 58.071 47.619 0.00 0.00 40.71 3.28
1046 1047 3.265489 AGGTACTCCCTCCATTCCAAAA 58.735 45.455 0.00 0.00 40.71 2.44
1047 1048 3.858638 AGGTACTCCCTCCATTCCAAAAT 59.141 43.478 0.00 0.00 40.71 1.82
1048 1049 5.043762 AGGTACTCCCTCCATTCCAAAATA 58.956 41.667 0.00 0.00 40.71 1.40
1049 1050 5.132816 AGGTACTCCCTCCATTCCAAAATAG 59.867 44.000 0.00 0.00 40.71 1.73
1050 1051 5.132144 GGTACTCCCTCCATTCCAAAATAGA 59.868 44.000 0.00 0.00 0.00 1.98
1051 1052 6.183361 GGTACTCCCTCCATTCCAAAATAGAT 60.183 42.308 0.00 0.00 0.00 1.98
1052 1053 5.699143 ACTCCCTCCATTCCAAAATAGATG 58.301 41.667 0.00 0.00 0.00 2.90
1053 1054 5.433051 ACTCCCTCCATTCCAAAATAGATGA 59.567 40.000 0.00 0.00 0.00 2.92
1054 1055 5.694995 TCCCTCCATTCCAAAATAGATGAC 58.305 41.667 0.00 0.00 0.00 3.06
1055 1056 4.829492 CCCTCCATTCCAAAATAGATGACC 59.171 45.833 0.00 0.00 0.00 4.02
1056 1057 4.829492 CCTCCATTCCAAAATAGATGACCC 59.171 45.833 0.00 0.00 0.00 4.46
1057 1058 5.448654 CTCCATTCCAAAATAGATGACCCA 58.551 41.667 0.00 0.00 0.00 4.51
1058 1059 5.836705 TCCATTCCAAAATAGATGACCCAA 58.163 37.500 0.00 0.00 0.00 4.12
1059 1060 5.656416 TCCATTCCAAAATAGATGACCCAAC 59.344 40.000 0.00 0.00 0.00 3.77
1060 1061 5.658190 CCATTCCAAAATAGATGACCCAACT 59.342 40.000 0.00 0.00 0.00 3.16
1061 1062 6.155049 CCATTCCAAAATAGATGACCCAACTT 59.845 38.462 0.00 0.00 0.00 2.66
1062 1063 7.310609 CCATTCCAAAATAGATGACCCAACTTT 60.311 37.037 0.00 0.00 0.00 2.66
1063 1064 8.748412 CATTCCAAAATAGATGACCCAACTTTA 58.252 33.333 0.00 0.00 0.00 1.85
1064 1065 8.893563 TTCCAAAATAGATGACCCAACTTTAT 57.106 30.769 0.00 0.00 0.00 1.40
1065 1066 9.983024 TTCCAAAATAGATGACCCAACTTTATA 57.017 29.630 0.00 0.00 0.00 0.98
1066 1067 9.403583 TCCAAAATAGATGACCCAACTTTATAC 57.596 33.333 0.00 0.00 0.00 1.47
1067 1068 9.408648 CCAAAATAGATGACCCAACTTTATACT 57.591 33.333 0.00 0.00 0.00 2.12
1102 1103 3.113260 GGAGTAATTCCGATGGACCAG 57.887 52.381 0.00 0.00 35.91 4.00
1106 1107 0.749454 AATTCCGATGGACCAGCTGC 60.749 55.000 8.66 0.00 0.00 5.25
1125 1126 5.298777 AGCTGCCTTTTGTTCATCAGATATC 59.701 40.000 0.00 0.00 0.00 1.63
1126 1127 5.066893 GCTGCCTTTTGTTCATCAGATATCA 59.933 40.000 5.32 0.00 0.00 2.15
1157 1158 0.875059 GTTAGGTTGCAGACTGGTGC 59.125 55.000 4.26 0.00 44.27 5.01
1177 1178 3.780902 GCCATTGGCCATAAACAACTAC 58.219 45.455 17.28 0.00 44.06 2.73
1181 1182 5.393027 CCATTGGCCATAAACAACTACACTC 60.393 44.000 6.09 0.00 0.00 3.51
1231 1236 8.487313 TTGTATGTCAGTATGTATTCACAACC 57.513 34.615 0.00 0.00 38.42 3.77
1245 1254 9.469807 TGTATTCACAACCACATTAACATTTTC 57.530 29.630 0.00 0.00 0.00 2.29
1439 1460 6.621316 TTGACCTTAACAAGCGACATAAAA 57.379 33.333 0.00 0.00 0.00 1.52
1474 1496 0.512952 CTCCGTGACGCCAAGAAAAG 59.487 55.000 0.00 0.00 0.00 2.27
1529 1551 5.923114 CCCTGAGTGAATAATACAGTCATCG 59.077 44.000 0.00 0.00 43.60 3.84
1622 1724 8.376270 AGTCAGCTAGGTAGTTTTGTTTCTATT 58.624 33.333 0.00 0.00 0.00 1.73
1623 1725 8.443937 GTCAGCTAGGTAGTTTTGTTTCTATTG 58.556 37.037 0.00 0.00 0.00 1.90
1705 1821 3.565482 GGTCACCGACTCACCGTAATATA 59.435 47.826 0.00 0.00 32.47 0.86
1706 1822 4.531332 GTCACCGACTCACCGTAATATAC 58.469 47.826 0.00 0.00 0.00 1.47
1777 1894 9.992910 TCATCATCGATCAAAATAAAGTTTCAG 57.007 29.630 0.00 0.00 0.00 3.02
1827 1944 6.482308 ACAAGTCAGCTAAATAACGTTCTGTT 59.518 34.615 2.82 0.00 44.78 3.16
1979 2409 5.249393 AGTCCACTCAGTACAGATTTCCATT 59.751 40.000 0.00 0.00 0.00 3.16
1998 2429 3.804193 GCTGCCAGCCGCTAACAC 61.804 66.667 5.06 0.00 38.78 3.32
2170 2622 9.765795 ATTTAAGCTTTGTATACTAGCTACCTG 57.234 33.333 24.05 0.00 44.05 4.00
2225 2678 6.215431 TCATCCCAGGAATCTTTTGAGAGTAA 59.785 38.462 0.00 0.00 0.00 2.24
2260 2713 3.496331 CAGGGTCTTGTGTATGGGTTTT 58.504 45.455 0.00 0.00 0.00 2.43
2265 2718 4.082949 GGTCTTGTGTATGGGTTTTGTAGC 60.083 45.833 0.00 0.00 0.00 3.58
2266 2719 4.517453 GTCTTGTGTATGGGTTTTGTAGCA 59.483 41.667 0.00 0.00 0.00 3.49
2267 2720 5.009210 GTCTTGTGTATGGGTTTTGTAGCAA 59.991 40.000 0.00 0.00 0.00 3.91
2268 2721 5.594725 TCTTGTGTATGGGTTTTGTAGCAAA 59.405 36.000 0.00 0.00 0.00 3.68
2269 2722 6.266558 TCTTGTGTATGGGTTTTGTAGCAAAT 59.733 34.615 0.00 0.00 0.00 2.32
2272 2725 8.128322 TGTGTATGGGTTTTGTAGCAAATTAT 57.872 30.769 0.00 0.00 0.00 1.28
2275 2728 9.469097 TGTATGGGTTTTGTAGCAAATTATACT 57.531 29.630 0.00 0.00 0.00 2.12
2337 2797 6.591448 CGCACCATCTTATCTCAATATAGCAA 59.409 38.462 0.00 0.00 0.00 3.91
2342 2802 7.335422 CCATCTTATCTCAATATAGCAACCACC 59.665 40.741 0.00 0.00 0.00 4.61
2352 2812 0.037590 AGCAACCACCGCCTATCAAA 59.962 50.000 0.00 0.00 0.00 2.69
2360 2820 2.552315 CACCGCCTATCAAACAACAACT 59.448 45.455 0.00 0.00 0.00 3.16
2361 2821 3.004315 CACCGCCTATCAAACAACAACTT 59.996 43.478 0.00 0.00 0.00 2.66
2362 2822 3.634910 ACCGCCTATCAAACAACAACTTT 59.365 39.130 0.00 0.00 0.00 2.66
2384 2844 1.368374 TGTAGAAAGGGGGTTGAGGG 58.632 55.000 0.00 0.00 0.00 4.30
2390 2850 2.861974 GGGGGTTGAGGGTGGGAA 60.862 66.667 0.00 0.00 0.00 3.97
2404 2876 3.268595 GGGTGGGAAGAGAGGGAAAATTA 59.731 47.826 0.00 0.00 0.00 1.40
2406 2878 4.018324 GGTGGGAAGAGAGGGAAAATTAGT 60.018 45.833 0.00 0.00 0.00 2.24
2407 2879 5.516768 GGTGGGAAGAGAGGGAAAATTAGTT 60.517 44.000 0.00 0.00 0.00 2.24
2408 2880 6.010850 GTGGGAAGAGAGGGAAAATTAGTTT 58.989 40.000 0.00 0.00 0.00 2.66
2454 2926 8.870879 GGCTTTATTACTAATCATAGTTAGGCG 58.129 37.037 0.00 0.00 42.39 5.52
2474 2946 3.758973 TTCGCCCCGTGCAAACTCA 62.759 57.895 0.00 0.00 41.33 3.41
2478 2950 3.726517 CCCGTGCAAACTCAGCGG 61.727 66.667 2.86 2.86 41.82 5.52
2479 2951 4.389576 CCGTGCAAACTCAGCGGC 62.390 66.667 0.00 0.00 35.90 6.53
2480 2952 3.349006 CGTGCAAACTCAGCGGCT 61.349 61.111 0.00 0.00 33.85 5.52
2481 2953 2.027073 CGTGCAAACTCAGCGGCTA 61.027 57.895 0.26 0.00 33.85 3.93
2482 2954 1.565156 CGTGCAAACTCAGCGGCTAA 61.565 55.000 0.26 0.00 33.85 3.09
2483 2955 0.804989 GTGCAAACTCAGCGGCTAAT 59.195 50.000 0.26 0.00 33.85 1.73
2484 2956 1.086696 TGCAAACTCAGCGGCTAATC 58.913 50.000 0.26 0.00 33.85 1.75
2485 2957 1.086696 GCAAACTCAGCGGCTAATCA 58.913 50.000 0.26 0.00 0.00 2.57
2486 2958 1.063174 GCAAACTCAGCGGCTAATCAG 59.937 52.381 0.26 0.00 0.00 2.90
2502 2974 6.583912 CTAATCAGCAAATTTTGGCAGATG 57.416 37.500 10.96 0.00 36.54 2.90
2503 2975 4.546829 ATCAGCAAATTTTGGCAGATGT 57.453 36.364 10.96 0.00 35.33 3.06
2504 2976 4.339872 TCAGCAAATTTTGGCAGATGTT 57.660 36.364 10.96 0.00 0.00 2.71
2505 2977 4.059511 TCAGCAAATTTTGGCAGATGTTG 58.940 39.130 10.96 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 9.273016 TGAAGGAAACAACATAAAACAAAACAA 57.727 25.926 0.00 0.00 0.00 2.83
26 27 8.833231 TGAAGGAAACAACATAAAACAAAACA 57.167 26.923 0.00 0.00 0.00 2.83
27 28 9.701355 CATGAAGGAAACAACATAAAACAAAAC 57.299 29.630 0.00 0.00 0.00 2.43
28 29 8.887717 CCATGAAGGAAACAACATAAAACAAAA 58.112 29.630 0.00 0.00 41.22 2.44
29 30 8.260818 TCCATGAAGGAAACAACATAAAACAAA 58.739 29.630 0.00 0.00 45.65 2.83
30 31 7.786030 TCCATGAAGGAAACAACATAAAACAA 58.214 30.769 0.00 0.00 45.65 2.83
31 32 7.353414 TCCATGAAGGAAACAACATAAAACA 57.647 32.000 0.00 0.00 45.65 2.83
99 100 9.048446 CATCTTGAACATTTCAGGAACATTTTT 57.952 29.630 5.00 0.00 46.76 1.94
100 101 8.206189 ACATCTTGAACATTTCAGGAACATTTT 58.794 29.630 5.00 0.00 46.76 1.82
101 102 7.729116 ACATCTTGAACATTTCAGGAACATTT 58.271 30.769 5.00 0.00 46.76 2.32
102 103 7.294017 ACATCTTGAACATTTCAGGAACATT 57.706 32.000 5.00 0.00 46.76 2.71
103 104 6.906157 ACATCTTGAACATTTCAGGAACAT 57.094 33.333 5.00 0.00 46.76 2.71
104 105 6.513230 CGAACATCTTGAACATTTCAGGAACA 60.513 38.462 5.00 0.00 46.76 3.18
105 106 5.853282 CGAACATCTTGAACATTTCAGGAAC 59.147 40.000 5.00 0.00 46.76 3.62
106 107 5.562696 GCGAACATCTTGAACATTTCAGGAA 60.563 40.000 5.00 0.00 46.76 3.36
108 109 4.161333 GCGAACATCTTGAACATTTCAGG 58.839 43.478 0.00 0.00 41.38 3.86
109 110 4.786507 TGCGAACATCTTGAACATTTCAG 58.213 39.130 0.00 0.00 41.38 3.02
110 111 4.827304 TGCGAACATCTTGAACATTTCA 57.173 36.364 0.00 0.00 38.04 2.69
111 112 6.695292 AAATGCGAACATCTTGAACATTTC 57.305 33.333 0.00 0.00 34.62 2.17
112 113 6.700960 TGAAAATGCGAACATCTTGAACATTT 59.299 30.769 0.00 0.00 37.73 2.32
113 114 6.215121 TGAAAATGCGAACATCTTGAACATT 58.785 32.000 0.00 0.00 34.62 2.71
114 115 5.771469 TGAAAATGCGAACATCTTGAACAT 58.229 33.333 0.00 0.00 34.62 2.71
115 116 5.180367 TGAAAATGCGAACATCTTGAACA 57.820 34.783 0.00 0.00 34.62 3.18
116 117 4.618489 CCTGAAAATGCGAACATCTTGAAC 59.382 41.667 0.00 0.00 34.62 3.18
117 118 4.518590 TCCTGAAAATGCGAACATCTTGAA 59.481 37.500 0.00 0.00 34.62 2.69
118 119 4.071423 TCCTGAAAATGCGAACATCTTGA 58.929 39.130 0.00 0.00 34.62 3.02
119 120 4.424061 TCCTGAAAATGCGAACATCTTG 57.576 40.909 0.00 0.00 34.62 3.02
120 121 5.649782 ATTCCTGAAAATGCGAACATCTT 57.350 34.783 0.00 0.00 34.62 2.40
121 122 5.649782 AATTCCTGAAAATGCGAACATCT 57.350 34.783 0.00 0.00 34.62 2.90
122 123 6.146021 ACAAAATTCCTGAAAATGCGAACATC 59.854 34.615 0.00 0.00 34.62 3.06
123 124 5.990996 ACAAAATTCCTGAAAATGCGAACAT 59.009 32.000 0.00 0.00 38.49 2.71
124 125 5.355596 ACAAAATTCCTGAAAATGCGAACA 58.644 33.333 0.00 0.00 0.00 3.18
125 126 5.905480 ACAAAATTCCTGAAAATGCGAAC 57.095 34.783 0.00 0.00 0.00 3.95
126 127 6.045318 TGAACAAAATTCCTGAAAATGCGAA 58.955 32.000 0.00 0.00 0.00 4.70
127 128 5.595885 TGAACAAAATTCCTGAAAATGCGA 58.404 33.333 0.00 0.00 0.00 5.10
128 129 5.903764 TGAACAAAATTCCTGAAAATGCG 57.096 34.783 0.00 0.00 0.00 4.73
129 130 9.518906 AAATTTGAACAAAATTCCTGAAAATGC 57.481 25.926 4.12 0.00 45.73 3.56
134 135 9.664332 TCTGAAAATTTGAACAAAATTCCTGAA 57.336 25.926 17.75 0.00 45.73 3.02
135 136 9.664332 TTCTGAAAATTTGAACAAAATTCCTGA 57.336 25.926 17.75 14.70 45.73 3.86
144 145 8.423973 CGCGAATAATTCTGAAAATTTGAACAA 58.576 29.630 0.00 0.00 0.00 2.83
145 146 7.593273 ACGCGAATAATTCTGAAAATTTGAACA 59.407 29.630 15.93 0.00 0.00 3.18
146 147 7.938743 ACGCGAATAATTCTGAAAATTTGAAC 58.061 30.769 15.93 0.00 0.00 3.18
147 148 8.514136 AACGCGAATAATTCTGAAAATTTGAA 57.486 26.923 15.93 0.00 0.00 2.69
148 149 8.514136 AAACGCGAATAATTCTGAAAATTTGA 57.486 26.923 15.93 0.00 0.00 2.69
149 150 7.892731 GGAAACGCGAATAATTCTGAAAATTTG 59.107 33.333 15.93 3.40 0.00 2.32
150 151 7.062956 GGGAAACGCGAATAATTCTGAAAATTT 59.937 33.333 15.93 0.00 0.00 1.82
151 152 6.530181 GGGAAACGCGAATAATTCTGAAAATT 59.470 34.615 15.93 0.00 0.00 1.82
152 153 6.033966 GGGAAACGCGAATAATTCTGAAAAT 58.966 36.000 15.93 0.00 0.00 1.82
153 154 5.182380 AGGGAAACGCGAATAATTCTGAAAA 59.818 36.000 15.93 0.00 0.00 2.29
154 155 4.698304 AGGGAAACGCGAATAATTCTGAAA 59.302 37.500 15.93 0.00 0.00 2.69
155 156 4.258543 AGGGAAACGCGAATAATTCTGAA 58.741 39.130 15.93 0.00 0.00 3.02
156 157 3.869065 AGGGAAACGCGAATAATTCTGA 58.131 40.909 15.93 0.00 0.00 3.27
157 158 5.728351 TTAGGGAAACGCGAATAATTCTG 57.272 39.130 15.93 0.00 0.00 3.02
158 159 6.937436 AATTAGGGAAACGCGAATAATTCT 57.063 33.333 15.93 3.75 0.00 2.40
159 160 7.486870 ACAAAATTAGGGAAACGCGAATAATTC 59.513 33.333 15.93 8.83 0.00 2.17
160 161 7.317390 ACAAAATTAGGGAAACGCGAATAATT 58.683 30.769 15.93 10.50 0.00 1.40
161 162 6.859017 ACAAAATTAGGGAAACGCGAATAAT 58.141 32.000 15.93 4.87 0.00 1.28
162 163 6.256912 ACAAAATTAGGGAAACGCGAATAA 57.743 33.333 15.93 2.53 0.00 1.40
163 164 5.883503 ACAAAATTAGGGAAACGCGAATA 57.116 34.783 15.93 0.00 0.00 1.75
164 165 4.776795 ACAAAATTAGGGAAACGCGAAT 57.223 36.364 15.93 0.00 0.00 3.34
165 166 4.276431 AGAACAAAATTAGGGAAACGCGAA 59.724 37.500 15.93 0.00 0.00 4.70
166 167 3.816523 AGAACAAAATTAGGGAAACGCGA 59.183 39.130 15.93 0.00 0.00 5.87
167 168 4.155310 AGAACAAAATTAGGGAAACGCG 57.845 40.909 3.53 3.53 0.00 6.01
168 169 4.156182 CGAGAACAAAATTAGGGAAACGC 58.844 43.478 0.00 0.00 0.00 4.84
169 170 4.083484 AGCGAGAACAAAATTAGGGAAACG 60.083 41.667 0.00 0.00 0.00 3.60
170 171 5.372547 AGCGAGAACAAAATTAGGGAAAC 57.627 39.130 0.00 0.00 0.00 2.78
171 172 6.399639 AAAGCGAGAACAAAATTAGGGAAA 57.600 33.333 0.00 0.00 0.00 3.13
172 173 6.039941 TGAAAAGCGAGAACAAAATTAGGGAA 59.960 34.615 0.00 0.00 0.00 3.97
173 174 5.533154 TGAAAAGCGAGAACAAAATTAGGGA 59.467 36.000 0.00 0.00 0.00 4.20
174 175 5.768317 TGAAAAGCGAGAACAAAATTAGGG 58.232 37.500 0.00 0.00 0.00 3.53
175 176 7.873739 ATTGAAAAGCGAGAACAAAATTAGG 57.126 32.000 0.00 0.00 0.00 2.69
181 182 8.760569 GGATTTTTATTGAAAAGCGAGAACAAA 58.239 29.630 0.00 0.00 42.94 2.83
182 183 7.923344 TGGATTTTTATTGAAAAGCGAGAACAA 59.077 29.630 0.00 0.00 42.94 2.83
183 184 7.429633 TGGATTTTTATTGAAAAGCGAGAACA 58.570 30.769 0.00 0.00 42.94 3.18
184 185 7.867445 TGGATTTTTATTGAAAAGCGAGAAC 57.133 32.000 0.00 0.00 42.94 3.01
185 186 9.487790 AAATGGATTTTTATTGAAAAGCGAGAA 57.512 25.926 0.00 0.00 42.94 2.87
186 187 9.487790 AAAATGGATTTTTATTGAAAAGCGAGA 57.512 25.926 0.00 0.00 42.94 4.04
187 188 9.532697 CAAAATGGATTTTTATTGAAAAGCGAG 57.467 29.630 0.00 0.00 42.94 5.03
188 189 9.050601 ACAAAATGGATTTTTATTGAAAAGCGA 57.949 25.926 0.00 0.00 42.94 4.93
209 210 9.658799 TGAACATTTCAACCATTTCTTACAAAA 57.341 25.926 0.00 0.00 36.59 2.44
210 211 9.658799 TTGAACATTTCAACCATTTCTTACAAA 57.341 25.926 0.00 0.00 44.21 2.83
225 226 5.068460 AGTCCACCGAAATTTGAACATTTCA 59.932 36.000 0.00 0.00 41.48 2.69
226 227 5.528870 AGTCCACCGAAATTTGAACATTTC 58.471 37.500 0.00 0.00 39.06 2.17
227 228 5.529581 AGTCCACCGAAATTTGAACATTT 57.470 34.783 0.00 0.00 0.00 2.32
228 229 5.529581 AAGTCCACCGAAATTTGAACATT 57.470 34.783 0.00 0.00 0.00 2.71
229 230 5.529581 AAAGTCCACCGAAATTTGAACAT 57.470 34.783 0.00 0.00 0.00 2.71
230 231 4.993029 AAAGTCCACCGAAATTTGAACA 57.007 36.364 0.00 0.00 0.00 3.18
231 232 5.808030 TCAAAAAGTCCACCGAAATTTGAAC 59.192 36.000 0.00 0.00 0.00 3.18
232 233 5.967088 TCAAAAAGTCCACCGAAATTTGAA 58.033 33.333 0.00 0.00 0.00 2.69
233 234 5.584253 TCAAAAAGTCCACCGAAATTTGA 57.416 34.783 0.00 0.00 0.00 2.69
234 235 5.810074 ACTTCAAAAAGTCCACCGAAATTTG 59.190 36.000 0.00 0.00 42.10 2.32
235 236 5.972935 ACTTCAAAAAGTCCACCGAAATTT 58.027 33.333 0.00 0.00 42.10 1.82
236 237 5.592104 ACTTCAAAAAGTCCACCGAAATT 57.408 34.783 0.00 0.00 42.10 1.82
237 238 5.826208 AGTACTTCAAAAAGTCCACCGAAAT 59.174 36.000 0.00 0.00 44.64 2.17
238 239 5.065474 CAGTACTTCAAAAAGTCCACCGAAA 59.935 40.000 0.00 0.00 44.64 3.46
239 240 4.573201 CAGTACTTCAAAAAGTCCACCGAA 59.427 41.667 0.00 0.00 44.64 4.30
240 241 4.124238 CAGTACTTCAAAAAGTCCACCGA 58.876 43.478 0.00 0.00 44.64 4.69
241 242 3.875134 ACAGTACTTCAAAAAGTCCACCG 59.125 43.478 0.00 0.00 44.64 4.94
242 243 5.503520 CGAACAGTACTTCAAAAAGTCCACC 60.504 44.000 0.00 0.00 44.64 4.61
243 244 5.064325 ACGAACAGTACTTCAAAAAGTCCAC 59.936 40.000 0.00 0.00 44.64 4.02
244 245 5.180271 ACGAACAGTACTTCAAAAAGTCCA 58.820 37.500 0.00 0.00 44.64 4.02
245 246 5.729974 ACGAACAGTACTTCAAAAAGTCC 57.270 39.130 0.00 0.00 44.64 3.85
246 247 8.363029 CAAAAACGAACAGTACTTCAAAAAGTC 58.637 33.333 0.00 0.00 44.64 3.01
248 249 8.222984 ACAAAAACGAACAGTACTTCAAAAAG 57.777 30.769 0.00 0.00 38.54 2.27
249 250 8.576936 AACAAAAACGAACAGTACTTCAAAAA 57.423 26.923 0.00 0.00 0.00 1.94
250 251 8.077386 AGAACAAAAACGAACAGTACTTCAAAA 58.923 29.630 0.00 0.00 0.00 2.44
251 252 7.586747 AGAACAAAAACGAACAGTACTTCAAA 58.413 30.769 0.00 0.00 0.00 2.69
252 253 7.136289 AGAACAAAAACGAACAGTACTTCAA 57.864 32.000 0.00 0.00 0.00 2.69
253 254 6.730960 AGAACAAAAACGAACAGTACTTCA 57.269 33.333 0.00 0.00 0.00 3.02
254 255 7.747357 TGAAAGAACAAAAACGAACAGTACTTC 59.253 33.333 0.00 0.00 0.00 3.01
255 256 7.586747 TGAAAGAACAAAAACGAACAGTACTT 58.413 30.769 0.00 0.00 0.00 2.24
256 257 7.136289 TGAAAGAACAAAAACGAACAGTACT 57.864 32.000 0.00 0.00 0.00 2.73
257 258 7.964545 ATGAAAGAACAAAAACGAACAGTAC 57.035 32.000 0.00 0.00 0.00 2.73
259 260 8.973835 TTTATGAAAGAACAAAAACGAACAGT 57.026 26.923 0.00 0.00 0.00 3.55
347 348 9.151471 TGAAAAATCCGAAAAATGTGTGTTAAA 57.849 25.926 0.00 0.00 0.00 1.52
348 349 8.703604 TGAAAAATCCGAAAAATGTGTGTTAA 57.296 26.923 0.00 0.00 0.00 2.01
349 350 8.703604 TTGAAAAATCCGAAAAATGTGTGTTA 57.296 26.923 0.00 0.00 0.00 2.41
350 351 7.602517 TTGAAAAATCCGAAAAATGTGTGTT 57.397 28.000 0.00 0.00 0.00 3.32
351 352 7.602517 TTTGAAAAATCCGAAAAATGTGTGT 57.397 28.000 0.00 0.00 0.00 3.72
352 353 8.886816 TTTTTGAAAAATCCGAAAAATGTGTG 57.113 26.923 0.00 0.00 0.00 3.82
408 409 8.892723 GGGAACATTTTCTGAAATTCTGTTTTT 58.107 29.630 18.76 5.94 33.25 1.94
409 410 8.046107 TGGGAACATTTTCTGAAATTCTGTTTT 58.954 29.630 18.76 6.42 33.25 2.43
410 411 7.563906 TGGGAACATTTTCTGAAATTCTGTTT 58.436 30.769 18.76 9.42 33.25 2.83
411 412 7.123355 TGGGAACATTTTCTGAAATTCTGTT 57.877 32.000 18.22 18.22 33.25 3.16
412 413 6.239402 CCTGGGAACATTTTCTGAAATTCTGT 60.239 38.462 3.31 5.82 41.51 3.41
413 414 6.161381 CCTGGGAACATTTTCTGAAATTCTG 58.839 40.000 3.31 5.24 41.51 3.02
414 415 5.840693 ACCTGGGAACATTTTCTGAAATTCT 59.159 36.000 3.31 0.00 41.51 2.40
415 416 6.101650 ACCTGGGAACATTTTCTGAAATTC 57.898 37.500 3.31 5.21 41.51 2.17
416 417 6.499106 AACCTGGGAACATTTTCTGAAATT 57.501 33.333 3.31 0.00 41.51 1.82
417 418 6.499106 AAACCTGGGAACATTTTCTGAAAT 57.501 33.333 3.31 0.00 41.51 2.17
418 419 5.948742 AAACCTGGGAACATTTTCTGAAA 57.051 34.783 0.00 0.00 41.51 2.69
419 420 7.425224 TTTAAACCTGGGAACATTTTCTGAA 57.575 32.000 0.00 0.00 41.51 3.02
420 421 7.425224 TTTTAAACCTGGGAACATTTTCTGA 57.575 32.000 0.00 0.00 41.51 3.27
504 505 9.541884 TGGGTTTTAGCCTTTTCTATCTTTTAT 57.458 29.630 0.00 0.00 36.53 1.40
505 506 8.943594 TGGGTTTTAGCCTTTTCTATCTTTTA 57.056 30.769 0.00 0.00 36.53 1.52
506 507 7.849322 TGGGTTTTAGCCTTTTCTATCTTTT 57.151 32.000 0.00 0.00 36.53 2.27
507 508 7.289084 TGTTGGGTTTTAGCCTTTTCTATCTTT 59.711 33.333 0.00 0.00 36.53 2.52
508 509 6.780522 TGTTGGGTTTTAGCCTTTTCTATCTT 59.219 34.615 0.00 0.00 36.53 2.40
509 510 6.311735 TGTTGGGTTTTAGCCTTTTCTATCT 58.688 36.000 0.00 0.00 36.53 1.98
510 511 6.584185 TGTTGGGTTTTAGCCTTTTCTATC 57.416 37.500 0.00 0.00 36.53 2.08
511 512 6.987403 TTGTTGGGTTTTAGCCTTTTCTAT 57.013 33.333 0.00 0.00 36.53 1.98
512 513 6.793505 TTTGTTGGGTTTTAGCCTTTTCTA 57.206 33.333 0.00 0.00 36.53 2.10
513 514 5.685520 TTTGTTGGGTTTTAGCCTTTTCT 57.314 34.783 0.00 0.00 36.53 2.52
514 515 5.220510 CGTTTTGTTGGGTTTTAGCCTTTTC 60.221 40.000 0.00 0.00 36.53 2.29
515 516 4.632251 CGTTTTGTTGGGTTTTAGCCTTTT 59.368 37.500 0.00 0.00 36.53 2.27
516 517 4.081586 TCGTTTTGTTGGGTTTTAGCCTTT 60.082 37.500 0.00 0.00 36.53 3.11
517 518 3.447944 TCGTTTTGTTGGGTTTTAGCCTT 59.552 39.130 0.00 0.00 36.53 4.35
518 519 3.025262 TCGTTTTGTTGGGTTTTAGCCT 58.975 40.909 0.00 0.00 36.53 4.58
519 520 3.117794 GTCGTTTTGTTGGGTTTTAGCC 58.882 45.455 0.00 0.00 36.00 3.93
520 521 3.771798 TGTCGTTTTGTTGGGTTTTAGC 58.228 40.909 0.00 0.00 0.00 3.09
521 522 4.356289 CCTGTCGTTTTGTTGGGTTTTAG 58.644 43.478 0.00 0.00 0.00 1.85
522 523 3.130693 CCCTGTCGTTTTGTTGGGTTTTA 59.869 43.478 0.00 0.00 0.00 1.52
523 524 2.093921 CCCTGTCGTTTTGTTGGGTTTT 60.094 45.455 0.00 0.00 0.00 2.43
524 525 1.478916 CCCTGTCGTTTTGTTGGGTTT 59.521 47.619 0.00 0.00 0.00 3.27
525 526 1.107945 CCCTGTCGTTTTGTTGGGTT 58.892 50.000 0.00 0.00 0.00 4.11
526 527 0.753848 CCCCTGTCGTTTTGTTGGGT 60.754 55.000 0.00 0.00 33.13 4.51
527 528 0.466555 TCCCCTGTCGTTTTGTTGGG 60.467 55.000 0.00 0.00 34.68 4.12
528 529 1.394618 TTCCCCTGTCGTTTTGTTGG 58.605 50.000 0.00 0.00 0.00 3.77
529 530 3.512033 TTTTCCCCTGTCGTTTTGTTG 57.488 42.857 0.00 0.00 0.00 3.33
547 548 4.134563 AGAAGTGACGTACTGCCATTTTT 58.865 39.130 0.00 0.00 40.26 1.94
548 549 3.740115 AGAAGTGACGTACTGCCATTTT 58.260 40.909 0.00 0.00 40.26 1.82
549 550 3.402628 AGAAGTGACGTACTGCCATTT 57.597 42.857 0.00 0.00 40.26 2.32
550 551 3.067106 CAAGAAGTGACGTACTGCCATT 58.933 45.455 0.00 0.00 40.26 3.16
551 552 2.037251 ACAAGAAGTGACGTACTGCCAT 59.963 45.455 0.00 0.00 40.26 4.40
552 553 1.411246 ACAAGAAGTGACGTACTGCCA 59.589 47.619 0.00 0.00 40.26 4.92
553 554 2.150397 ACAAGAAGTGACGTACTGCC 57.850 50.000 0.00 0.00 40.26 4.85
554 555 2.985139 GGTACAAGAAGTGACGTACTGC 59.015 50.000 0.00 0.00 40.26 4.40
555 556 3.231965 CGGTACAAGAAGTGACGTACTG 58.768 50.000 0.00 0.00 40.26 2.74
556 557 2.880890 ACGGTACAAGAAGTGACGTACT 59.119 45.455 0.00 0.00 40.46 2.73
557 558 3.273919 ACGGTACAAGAAGTGACGTAC 57.726 47.619 0.00 0.00 40.46 3.67
558 559 3.120199 GCTACGGTACAAGAAGTGACGTA 60.120 47.826 0.00 0.00 41.71 3.57
559 560 2.351157 GCTACGGTACAAGAAGTGACGT 60.351 50.000 0.00 0.00 43.19 4.34
560 561 2.248487 GCTACGGTACAAGAAGTGACG 58.752 52.381 0.00 0.00 36.93 4.35
561 562 2.230750 AGGCTACGGTACAAGAAGTGAC 59.769 50.000 0.00 0.00 0.00 3.67
562 563 2.522185 AGGCTACGGTACAAGAAGTGA 58.478 47.619 0.00 0.00 0.00 3.41
563 564 4.445452 TTAGGCTACGGTACAAGAAGTG 57.555 45.455 0.00 0.00 0.00 3.16
564 565 5.473066 TTTTAGGCTACGGTACAAGAAGT 57.527 39.130 0.00 0.00 0.00 3.01
565 566 5.293569 CCATTTTAGGCTACGGTACAAGAAG 59.706 44.000 0.00 0.00 0.00 2.85
566 567 5.180271 CCATTTTAGGCTACGGTACAAGAA 58.820 41.667 0.00 0.00 0.00 2.52
567 568 4.383335 CCCATTTTAGGCTACGGTACAAGA 60.383 45.833 0.00 0.00 0.00 3.02
568 569 3.875134 CCCATTTTAGGCTACGGTACAAG 59.125 47.826 0.00 0.00 0.00 3.16
569 570 3.876341 CCCATTTTAGGCTACGGTACAA 58.124 45.455 0.00 0.00 0.00 2.41
570 571 3.547054 CCCATTTTAGGCTACGGTACA 57.453 47.619 0.00 0.00 0.00 2.90
594 595 3.090532 AGGGAGGTCCGATTGGGC 61.091 66.667 0.00 0.00 41.52 5.36
595 596 1.562672 AACAGGGAGGTCCGATTGGG 61.563 60.000 0.00 0.00 41.52 4.12
596 597 0.107654 GAACAGGGAGGTCCGATTGG 60.108 60.000 0.00 0.00 41.52 3.16
597 598 0.460284 CGAACAGGGAGGTCCGATTG 60.460 60.000 0.00 0.00 41.52 2.67
598 599 0.903454 ACGAACAGGGAGGTCCGATT 60.903 55.000 0.00 0.00 41.52 3.34
599 600 1.305046 ACGAACAGGGAGGTCCGAT 60.305 57.895 0.00 0.00 41.52 4.18
600 601 1.975407 GACGAACAGGGAGGTCCGA 60.975 63.158 0.00 0.00 41.52 4.55
601 602 2.572284 GACGAACAGGGAGGTCCG 59.428 66.667 0.00 0.00 41.52 4.79
602 603 2.572284 CGACGAACAGGGAGGTCC 59.428 66.667 0.00 0.00 0.00 4.46
603 604 2.126031 GCGACGAACAGGGAGGTC 60.126 66.667 0.00 0.00 0.00 3.85
604 605 3.692406 GGCGACGAACAGGGAGGT 61.692 66.667 0.00 0.00 0.00 3.85
605 606 4.452733 GGGCGACGAACAGGGAGG 62.453 72.222 0.00 0.00 0.00 4.30
606 607 3.382832 AGGGCGACGAACAGGGAG 61.383 66.667 0.00 0.00 0.00 4.30
607 608 3.691342 CAGGGCGACGAACAGGGA 61.691 66.667 0.00 0.00 0.00 4.20
608 609 3.934391 GACAGGGCGACGAACAGGG 62.934 68.421 0.00 0.00 0.00 4.45
609 610 1.592400 TAGACAGGGCGACGAACAGG 61.592 60.000 0.00 0.00 0.00 4.00
610 611 0.456221 ATAGACAGGGCGACGAACAG 59.544 55.000 0.00 0.00 0.00 3.16
611 612 0.892755 AATAGACAGGGCGACGAACA 59.107 50.000 0.00 0.00 0.00 3.18
612 613 1.659098 CAAATAGACAGGGCGACGAAC 59.341 52.381 0.00 0.00 0.00 3.95
613 614 1.546923 TCAAATAGACAGGGCGACGAA 59.453 47.619 0.00 0.00 0.00 3.85
614 615 1.135199 GTCAAATAGACAGGGCGACGA 60.135 52.381 0.00 0.00 46.77 4.20
615 616 1.278238 GTCAAATAGACAGGGCGACG 58.722 55.000 0.00 0.00 46.77 5.12
625 626 2.169769 GGACCGGGATGTGTCAAATAGA 59.830 50.000 6.32 0.00 33.09 1.98
626 627 2.093181 TGGACCGGGATGTGTCAAATAG 60.093 50.000 6.32 0.00 33.09 1.73
627 628 1.909986 TGGACCGGGATGTGTCAAATA 59.090 47.619 6.32 0.00 33.09 1.40
628 629 0.695924 TGGACCGGGATGTGTCAAAT 59.304 50.000 6.32 0.00 33.09 2.32
629 630 0.036164 CTGGACCGGGATGTGTCAAA 59.964 55.000 6.32 0.00 33.09 2.69
630 631 0.834261 TCTGGACCGGGATGTGTCAA 60.834 55.000 6.32 0.00 33.09 3.18
631 632 0.834261 TTCTGGACCGGGATGTGTCA 60.834 55.000 6.32 0.00 33.09 3.58
632 633 0.323629 TTTCTGGACCGGGATGTGTC 59.676 55.000 6.32 0.00 0.00 3.67
633 634 0.768622 TTTTCTGGACCGGGATGTGT 59.231 50.000 6.32 0.00 0.00 3.72
634 635 1.904287 TTTTTCTGGACCGGGATGTG 58.096 50.000 6.32 0.00 0.00 3.21
665 666 1.522569 CTCCAGTGGAATCGGGGAC 59.477 63.158 14.17 0.00 0.00 4.46
666 667 1.689233 CCTCCAGTGGAATCGGGGA 60.689 63.158 14.17 0.00 0.00 4.81
667 668 2.746375 CCCTCCAGTGGAATCGGGG 61.746 68.421 22.33 20.02 32.81 5.73
668 669 2.746375 CCCCTCCAGTGGAATCGGG 61.746 68.421 22.89 22.89 35.28 5.14
669 670 2.911143 CCCCTCCAGTGGAATCGG 59.089 66.667 14.17 11.08 0.00 4.18
670 671 2.190578 GCCCCTCCAGTGGAATCG 59.809 66.667 14.17 1.23 0.00 3.34
671 672 2.190578 CGCCCCTCCAGTGGAATC 59.809 66.667 14.17 1.70 0.00 2.52
672 673 2.610859 ACGCCCCTCCAGTGGAAT 60.611 61.111 14.17 0.00 0.00 3.01
673 674 3.636231 CACGCCCCTCCAGTGGAA 61.636 66.667 14.17 0.00 32.68 3.53
680 681 4.603946 GATACCGCACGCCCCTCC 62.604 72.222 0.00 0.00 0.00 4.30
681 682 2.973180 GAAGATACCGCACGCCCCTC 62.973 65.000 0.00 0.00 0.00 4.30
682 683 3.081409 AAGATACCGCACGCCCCT 61.081 61.111 0.00 0.00 0.00 4.79
683 684 2.588034 GAAGATACCGCACGCCCC 60.588 66.667 0.00 0.00 0.00 5.80
684 685 1.591863 GAGAAGATACCGCACGCCC 60.592 63.158 0.00 0.00 0.00 6.13
685 686 1.591863 GGAGAAGATACCGCACGCC 60.592 63.158 0.00 0.00 0.00 5.68
686 687 0.872021 CAGGAGAAGATACCGCACGC 60.872 60.000 0.00 0.00 0.00 5.34
687 688 0.872021 GCAGGAGAAGATACCGCACG 60.872 60.000 0.00 0.00 0.00 5.34
688 689 0.872021 CGCAGGAGAAGATACCGCAC 60.872 60.000 0.00 0.00 0.00 5.34
689 690 1.035385 TCGCAGGAGAAGATACCGCA 61.035 55.000 0.00 0.00 0.00 5.69
690 691 0.595310 GTCGCAGGAGAAGATACCGC 60.595 60.000 0.00 0.00 0.00 5.68
691 692 0.317103 CGTCGCAGGAGAAGATACCG 60.317 60.000 0.00 0.00 0.00 4.02
692 693 0.595310 GCGTCGCAGGAGAAGATACC 60.595 60.000 13.44 0.00 0.00 2.73
693 694 0.930742 CGCGTCGCAGGAGAAGATAC 60.931 60.000 18.75 0.00 0.00 2.24
694 695 1.355563 CGCGTCGCAGGAGAAGATA 59.644 57.895 18.75 0.00 0.00 1.98
695 696 2.103143 CGCGTCGCAGGAGAAGAT 59.897 61.111 18.75 0.00 0.00 2.40
730 731 4.821589 GGAGGAAGAGCACGCCGG 62.822 72.222 0.00 0.00 0.00 6.13
731 732 4.821589 GGGAGGAAGAGCACGCCG 62.822 72.222 0.00 0.00 0.00 6.46
732 733 4.475135 GGGGAGGAAGAGCACGCC 62.475 72.222 0.00 0.00 0.00 5.68
733 734 4.475135 GGGGGAGGAAGAGCACGC 62.475 72.222 0.00 0.00 0.00 5.34
734 735 4.148825 CGGGGGAGGAAGAGCACG 62.149 72.222 0.00 0.00 0.00 5.34
735 736 3.787001 CCGGGGGAGGAAGAGCAC 61.787 72.222 0.00 0.00 0.00 4.40
738 739 4.806339 AGGCCGGGGGAGGAAGAG 62.806 72.222 2.18 0.00 0.00 2.85
739 740 4.348495 AAGGCCGGGGGAGGAAGA 62.348 66.667 2.18 0.00 0.00 2.87
740 741 3.798511 GAAGGCCGGGGGAGGAAG 61.799 72.222 2.18 0.00 0.00 3.46
741 742 4.348495 AGAAGGCCGGGGGAGGAA 62.348 66.667 2.18 0.00 0.00 3.36
742 743 4.798682 GAGAAGGCCGGGGGAGGA 62.799 72.222 2.18 0.00 0.00 3.71
743 744 4.806339 AGAGAAGGCCGGGGGAGG 62.806 72.222 2.18 0.00 0.00 4.30
744 745 3.157949 GAGAGAAGGCCGGGGGAG 61.158 72.222 2.18 0.00 0.00 4.30
745 746 4.798682 GGAGAGAAGGCCGGGGGA 62.799 72.222 2.18 0.00 0.00 4.81
750 751 2.905935 TACCTCCGGAGAGAAGGCCG 62.906 65.000 33.39 15.39 43.39 6.13
751 752 1.076192 TACCTCCGGAGAGAAGGCC 60.076 63.158 33.39 0.00 43.39 5.19
752 753 1.393487 GGTACCTCCGGAGAGAAGGC 61.393 65.000 33.39 15.01 43.39 4.35
753 754 0.259356 AGGTACCTCCGGAGAGAAGG 59.741 60.000 33.39 19.05 43.39 3.46
754 755 1.682740 GAGGTACCTCCGGAGAGAAG 58.317 60.000 33.39 18.06 43.39 2.85
755 756 0.107312 CGAGGTACCTCCGGAGAGAA 60.107 60.000 33.39 14.38 43.39 2.87
756 757 0.979709 TCGAGGTACCTCCGGAGAGA 60.980 60.000 33.39 20.55 43.39 3.10
757 758 0.814812 GTCGAGGTACCTCCGGAGAG 60.815 65.000 33.39 23.50 41.99 3.20
758 759 1.222936 GTCGAGGTACCTCCGGAGA 59.777 63.158 33.39 21.55 41.99 3.71
759 760 2.178890 CGTCGAGGTACCTCCGGAG 61.179 68.421 31.78 25.36 41.99 4.63
760 761 2.124983 CGTCGAGGTACCTCCGGA 60.125 66.667 31.78 22.54 41.99 5.14
761 762 3.885521 GCGTCGAGGTACCTCCGG 61.886 72.222 31.78 22.31 41.99 5.14
762 763 3.885521 GGCGTCGAGGTACCTCCG 61.886 72.222 31.78 29.10 41.99 4.63
763 764 3.885521 CGGCGTCGAGGTACCTCC 61.886 72.222 31.78 19.40 39.77 4.30
764 765 4.549516 GCGGCGTCGAGGTACCTC 62.550 72.222 29.18 29.18 39.00 3.85
794 795 1.244019 AATCAAGAAGGCGTGGTGGC 61.244 55.000 0.00 0.00 45.27 5.01
795 796 1.247567 AAATCAAGAAGGCGTGGTGG 58.752 50.000 0.00 0.00 0.00 4.61
796 797 3.369546 AAAAATCAAGAAGGCGTGGTG 57.630 42.857 0.00 0.00 0.00 4.17
815 816 3.817709 CTGTCCCAGCAAAAGGAAAAA 57.182 42.857 0.00 0.00 32.81 1.94
844 845 2.825836 GATTCAGGCACGCCAGGG 60.826 66.667 11.35 0.00 38.92 4.45
845 846 2.825836 GGATTCAGGCACGCCAGG 60.826 66.667 11.35 1.94 38.92 4.45
846 847 0.962356 AAAGGATTCAGGCACGCCAG 60.962 55.000 11.35 1.82 38.92 4.85
847 848 0.960364 GAAAGGATTCAGGCACGCCA 60.960 55.000 11.35 0.00 38.92 5.69
848 849 0.960364 TGAAAGGATTCAGGCACGCC 60.960 55.000 0.00 0.00 40.59 5.68
849 850 0.169009 GTGAAAGGATTCAGGCACGC 59.831 55.000 0.00 0.00 45.88 5.34
850 851 0.804989 GGTGAAAGGATTCAGGCACG 59.195 55.000 0.00 0.00 45.88 5.34
851 852 2.206576 AGGTGAAAGGATTCAGGCAC 57.793 50.000 0.00 0.00 45.88 5.01
852 853 2.517959 CAAGGTGAAAGGATTCAGGCA 58.482 47.619 0.00 0.00 45.88 4.75
853 854 1.821136 CCAAGGTGAAAGGATTCAGGC 59.179 52.381 0.00 0.00 45.88 4.85
854 855 1.821136 GCCAAGGTGAAAGGATTCAGG 59.179 52.381 0.00 0.00 45.88 3.86
855 856 2.490903 CAGCCAAGGTGAAAGGATTCAG 59.509 50.000 0.00 0.00 45.88 3.02
856 857 2.517959 CAGCCAAGGTGAAAGGATTCA 58.482 47.619 0.00 0.00 43.18 2.57
857 858 1.203287 GCAGCCAAGGTGAAAGGATTC 59.797 52.381 0.00 0.00 36.04 2.52
858 859 1.260544 GCAGCCAAGGTGAAAGGATT 58.739 50.000 0.00 0.00 32.22 3.01
859 860 0.112995 TGCAGCCAAGGTGAAAGGAT 59.887 50.000 0.00 0.00 32.22 3.24
860 861 0.823356 GTGCAGCCAAGGTGAAAGGA 60.823 55.000 0.00 0.00 32.22 3.36
861 862 0.825010 AGTGCAGCCAAGGTGAAAGG 60.825 55.000 0.00 0.00 32.22 3.11
862 863 1.035139 AAGTGCAGCCAAGGTGAAAG 58.965 50.000 0.00 0.00 32.22 2.62
863 864 0.746063 CAAGTGCAGCCAAGGTGAAA 59.254 50.000 0.00 0.00 32.22 2.69
864 865 0.395586 ACAAGTGCAGCCAAGGTGAA 60.396 50.000 0.00 0.00 32.22 3.18
865 866 0.395586 AACAAGTGCAGCCAAGGTGA 60.396 50.000 0.00 0.00 32.22 4.02
866 867 0.461135 AAACAAGTGCAGCCAAGGTG 59.539 50.000 0.00 0.00 0.00 4.00
867 868 0.746659 GAAACAAGTGCAGCCAAGGT 59.253 50.000 0.00 0.00 0.00 3.50
868 869 0.032540 GGAAACAAGTGCAGCCAAGG 59.967 55.000 0.00 0.00 0.00 3.61
869 870 1.035139 AGGAAACAAGTGCAGCCAAG 58.965 50.000 0.00 0.00 0.00 3.61
870 871 0.746063 CAGGAAACAAGTGCAGCCAA 59.254 50.000 0.00 0.00 0.00 4.52
871 872 0.106769 TCAGGAAACAAGTGCAGCCA 60.107 50.000 0.00 0.00 0.00 4.75
872 873 1.000938 CTTCAGGAAACAAGTGCAGCC 60.001 52.381 0.00 0.00 0.00 4.85
873 874 1.949525 TCTTCAGGAAACAAGTGCAGC 59.050 47.619 0.00 0.00 0.00 5.25
874 875 3.879295 TCTTCTTCAGGAAACAAGTGCAG 59.121 43.478 0.00 0.00 33.07 4.41
875 876 3.884895 TCTTCTTCAGGAAACAAGTGCA 58.115 40.909 0.00 0.00 33.07 4.57
876 877 4.576463 TCTTCTTCTTCAGGAAACAAGTGC 59.424 41.667 0.00 0.00 33.07 4.40
877 878 6.683974 TTCTTCTTCTTCAGGAAACAAGTG 57.316 37.500 0.00 0.00 33.07 3.16
878 879 7.703058 TTTTCTTCTTCTTCAGGAAACAAGT 57.297 32.000 0.00 0.00 33.07 3.16
909 910 0.828343 AGCTAGGTAGGGATGGCGAC 60.828 60.000 0.00 0.00 0.00 5.19
910 911 0.105658 AAGCTAGGTAGGGATGGCGA 60.106 55.000 0.00 0.00 0.00 5.54
911 912 1.546476 CTAAGCTAGGTAGGGATGGCG 59.454 57.143 0.00 0.00 0.00 5.69
912 913 1.276705 GCTAAGCTAGGTAGGGATGGC 59.723 57.143 0.00 0.00 0.00 4.40
913 914 2.896039 AGCTAAGCTAGGTAGGGATGG 58.104 52.381 0.00 0.00 36.99 3.51
914 915 4.833380 TGTAAGCTAAGCTAGGTAGGGATG 59.167 45.833 0.00 0.00 38.25 3.51
915 916 5.076057 TGTAAGCTAAGCTAGGTAGGGAT 57.924 43.478 0.00 0.00 38.25 3.85
916 917 4.531357 TGTAAGCTAAGCTAGGTAGGGA 57.469 45.455 0.00 0.00 38.25 4.20
917 918 4.039366 CCTTGTAAGCTAAGCTAGGTAGGG 59.961 50.000 0.00 0.00 38.25 3.53
918 919 4.650131 ACCTTGTAAGCTAAGCTAGGTAGG 59.350 45.833 13.47 5.90 40.71 3.18
919 920 5.855740 ACCTTGTAAGCTAAGCTAGGTAG 57.144 43.478 13.47 0.00 40.71 3.18
920 921 7.722949 TTAACCTTGTAAGCTAAGCTAGGTA 57.277 36.000 14.75 2.97 41.36 3.08
921 922 6.616237 TTAACCTTGTAAGCTAAGCTAGGT 57.384 37.500 10.67 10.67 43.25 3.08
922 923 8.422566 AGTATTAACCTTGTAAGCTAAGCTAGG 58.577 37.037 9.70 9.70 38.25 3.02
923 924 9.819267 AAGTATTAACCTTGTAAGCTAAGCTAG 57.181 33.333 0.00 0.00 38.25 3.42
925 926 9.597170 GTAAGTATTAACCTTGTAAGCTAAGCT 57.403 33.333 0.00 0.00 33.58 3.74
926 927 9.597170 AGTAAGTATTAACCTTGTAAGCTAAGC 57.403 33.333 0.00 0.00 28.70 3.09
929 930 9.880157 CCAAGTAAGTATTAACCTTGTAAGCTA 57.120 33.333 0.00 0.00 34.60 3.32
930 931 8.599792 TCCAAGTAAGTATTAACCTTGTAAGCT 58.400 33.333 0.00 0.00 34.60 3.74
931 932 8.782339 TCCAAGTAAGTATTAACCTTGTAAGC 57.218 34.615 0.00 0.00 34.60 3.09
961 962 2.192664 TCAGCTGGGCGATGTAAAAA 57.807 45.000 15.13 0.00 0.00 1.94
962 963 2.192664 TTCAGCTGGGCGATGTAAAA 57.807 45.000 15.13 0.00 0.00 1.52
963 964 2.083774 CTTTCAGCTGGGCGATGTAAA 58.916 47.619 15.13 3.34 0.00 2.01
964 965 1.003118 ACTTTCAGCTGGGCGATGTAA 59.997 47.619 15.13 0.00 0.00 2.41
965 966 0.613260 ACTTTCAGCTGGGCGATGTA 59.387 50.000 15.13 0.00 0.00 2.29
972 973 4.821805 TCTTTCTGTAAACTTTCAGCTGGG 59.178 41.667 15.13 7.27 0.00 4.45
979 980 8.447053 CCTCATAGCTTCTTTCTGTAAACTTTC 58.553 37.037 0.00 0.00 0.00 2.62
986 987 4.033709 AGCCCTCATAGCTTCTTTCTGTA 58.966 43.478 0.00 0.00 37.24 2.74
990 991 2.437651 AGGAGCCCTCATAGCTTCTTTC 59.562 50.000 0.00 0.00 44.06 2.62
1030 1031 5.767168 GTCATCTATTTTGGAATGGAGGGAG 59.233 44.000 0.00 0.00 36.39 4.30
1031 1032 5.399038 GGTCATCTATTTTGGAATGGAGGGA 60.399 44.000 0.00 0.00 36.39 4.20
1032 1033 4.829492 GGTCATCTATTTTGGAATGGAGGG 59.171 45.833 0.00 0.00 36.39 4.30
1033 1034 4.829492 GGGTCATCTATTTTGGAATGGAGG 59.171 45.833 0.00 0.00 36.39 4.30
1034 1035 5.448654 TGGGTCATCTATTTTGGAATGGAG 58.551 41.667 0.00 0.00 36.39 3.86
1035 1036 5.464588 TGGGTCATCTATTTTGGAATGGA 57.535 39.130 0.00 0.00 37.20 3.41
1036 1037 5.658190 AGTTGGGTCATCTATTTTGGAATGG 59.342 40.000 0.00 0.00 0.00 3.16
1037 1038 6.780457 AGTTGGGTCATCTATTTTGGAATG 57.220 37.500 0.00 0.00 0.00 2.67
1038 1039 7.797121 AAAGTTGGGTCATCTATTTTGGAAT 57.203 32.000 0.00 0.00 0.00 3.01
1039 1040 8.893563 ATAAAGTTGGGTCATCTATTTTGGAA 57.106 30.769 0.00 0.00 0.00 3.53
1040 1041 9.403583 GTATAAAGTTGGGTCATCTATTTTGGA 57.596 33.333 0.00 0.00 0.00 3.53
1041 1042 9.408648 AGTATAAAGTTGGGTCATCTATTTTGG 57.591 33.333 0.00 0.00 0.00 3.28
1067 1068 9.991906 CGGAATTACTCCTTCCATATAAAGTTA 57.008 33.333 3.26 0.00 42.85 2.24
1068 1069 8.711170 TCGGAATTACTCCTTCCATATAAAGTT 58.289 33.333 3.26 0.00 42.85 2.66
1069 1070 8.258850 TCGGAATTACTCCTTCCATATAAAGT 57.741 34.615 3.26 0.00 42.85 2.66
1070 1071 9.155975 CATCGGAATTACTCCTTCCATATAAAG 57.844 37.037 3.26 0.00 42.85 1.85
1071 1072 8.100791 CCATCGGAATTACTCCTTCCATATAAA 58.899 37.037 3.26 0.00 42.85 1.40
1072 1073 7.456585 TCCATCGGAATTACTCCTTCCATATAA 59.543 37.037 3.26 0.00 42.85 0.98
1073 1074 6.957606 TCCATCGGAATTACTCCTTCCATATA 59.042 38.462 3.26 0.00 42.85 0.86
1074 1075 5.785423 TCCATCGGAATTACTCCTTCCATAT 59.215 40.000 3.26 0.00 42.85 1.78
1075 1076 5.011738 GTCCATCGGAATTACTCCTTCCATA 59.988 44.000 3.26 0.00 42.85 2.74
1076 1077 3.973973 TCCATCGGAATTACTCCTTCCAT 59.026 43.478 3.26 0.00 42.85 3.41
1077 1078 3.134081 GTCCATCGGAATTACTCCTTCCA 59.866 47.826 3.26 0.00 42.85 3.53
1078 1079 3.494573 GGTCCATCGGAATTACTCCTTCC 60.495 52.174 0.00 0.00 42.85 3.46
1079 1080 3.134081 TGGTCCATCGGAATTACTCCTTC 59.866 47.826 0.00 0.00 42.85 3.46
1080 1081 3.112263 TGGTCCATCGGAATTACTCCTT 58.888 45.455 0.00 0.00 42.85 3.36
1081 1082 2.700897 CTGGTCCATCGGAATTACTCCT 59.299 50.000 0.00 0.00 42.85 3.69
1082 1083 2.807108 GCTGGTCCATCGGAATTACTCC 60.807 54.545 0.00 0.00 41.40 3.85
1083 1084 2.103263 AGCTGGTCCATCGGAATTACTC 59.897 50.000 0.00 0.00 31.38 2.59
1099 1100 1.614903 TGATGAACAAAAGGCAGCTGG 59.385 47.619 17.12 0.00 0.00 4.85
1102 1103 3.863142 ATCTGATGAACAAAAGGCAGC 57.137 42.857 0.00 0.00 0.00 5.25
1125 1126 5.132502 TGCAACCTAACCATCAGGATAATG 58.867 41.667 0.00 0.00 38.69 1.90
1126 1127 5.132648 TCTGCAACCTAACCATCAGGATAAT 59.867 40.000 0.00 0.00 38.69 1.28
1157 1158 4.462483 AGTGTAGTTGTTTATGGCCAATGG 59.538 41.667 10.96 0.00 0.00 3.16
1166 1167 6.597832 AGAGCAGAGAGTGTAGTTGTTTAT 57.402 37.500 0.00 0.00 0.00 1.40
1177 1178 4.869297 CAGTTCCAATTAGAGCAGAGAGTG 59.131 45.833 0.00 0.00 0.00 3.51
1181 1182 5.336150 TCTCAGTTCCAATTAGAGCAGAG 57.664 43.478 4.36 4.36 33.69 3.35
1245 1254 3.961477 TCGTCACATTTTTCACCTGTG 57.039 42.857 0.00 0.00 41.24 3.66
1456 1478 1.503818 GCTTTTCTTGGCGTCACGGA 61.504 55.000 0.00 0.00 0.00 4.69
1474 1496 0.453390 CTTCTTCGAATGCCCCTTGC 59.547 55.000 0.00 0.00 41.77 4.01
1630 1733 1.764134 CCGTAAGCCCCATTACACCTA 59.236 52.381 0.00 0.00 35.75 3.08
1642 1753 3.380479 TGACATATAGCACCGTAAGCC 57.620 47.619 0.00 0.00 0.00 4.35
1777 1894 0.040958 CAACTCCGAAGCAAGCACAC 60.041 55.000 0.00 0.00 0.00 3.82
1827 1944 4.604976 GCTCCGTTAGCGTTTAGATCTAA 58.395 43.478 11.24 11.24 42.53 2.10
1889 2293 7.827701 TGGAAAACAGTACACAACACAAAATA 58.172 30.769 0.00 0.00 0.00 1.40
1891 2295 6.085555 TGGAAAACAGTACACAACACAAAA 57.914 33.333 0.00 0.00 0.00 2.44
2158 2610 4.142227 GCAGTAAGTTGCAGGTAGCTAGTA 60.142 45.833 0.00 0.00 45.94 1.82
2159 2611 3.368531 GCAGTAAGTTGCAGGTAGCTAGT 60.369 47.826 0.00 0.00 45.94 2.57
2170 2622 4.295870 GTTAAAACCCAGCAGTAAGTTGC 58.704 43.478 0.00 0.00 44.41 4.17
2312 2772 6.101997 TGCTATATTGAGATAAGATGGTGCG 58.898 40.000 0.00 0.00 0.00 5.34
2337 2797 1.202830 TGTTGTTTGATAGGCGGTGGT 60.203 47.619 0.00 0.00 0.00 4.16
2361 2821 4.219919 CCTCAACCCCCTTTCTACAAAAA 58.780 43.478 0.00 0.00 0.00 1.94
2362 2822 3.437344 CCCTCAACCCCCTTTCTACAAAA 60.437 47.826 0.00 0.00 0.00 2.44
2377 2837 0.615850 CCTCTCTTCCCACCCTCAAC 59.384 60.000 0.00 0.00 0.00 3.18
2384 2844 5.180810 ACTAATTTTCCCTCTCTTCCCAC 57.819 43.478 0.00 0.00 0.00 4.61
2462 2934 4.389576 GCCGCTGAGTTTGCACGG 62.390 66.667 5.37 5.37 46.50 4.94
2466 2938 1.063174 CTGATTAGCCGCTGAGTTTGC 59.937 52.381 2.16 0.00 0.00 3.68
2479 2951 6.103997 ACATCTGCCAAAATTTGCTGATTAG 58.896 36.000 15.69 10.70 42.11 1.73
2480 2952 6.040209 ACATCTGCCAAAATTTGCTGATTA 57.960 33.333 15.69 0.00 42.11 1.75
2481 2953 4.901868 ACATCTGCCAAAATTTGCTGATT 58.098 34.783 15.69 8.49 42.11 2.57
2482 2954 4.546829 ACATCTGCCAAAATTTGCTGAT 57.453 36.364 13.67 13.67 43.98 2.90
2483 2955 4.059511 CAACATCTGCCAAAATTTGCTGA 58.940 39.130 10.96 10.96 39.32 4.26
2484 2956 3.364565 GCAACATCTGCCAAAATTTGCTG 60.365 43.478 0.00 0.00 46.13 4.41
2485 2957 2.809696 GCAACATCTGCCAAAATTTGCT 59.190 40.909 0.00 0.00 46.13 3.91
2486 2958 3.191735 GCAACATCTGCCAAAATTTGC 57.808 42.857 0.00 0.00 46.13 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.