Multiple sequence alignment - TraesCS2D01G057900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G057900 chr2D 100.000 4397 0 0 1 4397 22961326 22965722 0.000000e+00 8120.0
1 TraesCS2D01G057900 chr2D 86.094 489 34 14 228 688 22926727 22927209 3.050000e-136 496.0
2 TraesCS2D01G057900 chr2D 88.798 366 37 2 1875 2236 381956004 381955639 3.120000e-121 446.0
3 TraesCS2D01G057900 chr2D 93.038 158 10 1 64 221 445733671 445733827 3.420000e-56 230.0
4 TraesCS2D01G057900 chr2D 85.938 128 16 2 730 856 22952342 22952468 7.670000e-28 135.0
5 TraesCS2D01G057900 chr2B 88.278 4095 262 93 435 4397 37432637 37428629 0.000000e+00 4702.0
6 TraesCS2D01G057900 chr2B 90.588 170 10 5 64 232 708240518 708240682 2.060000e-53 220.0
7 TraesCS2D01G057900 chr2B 91.429 70 6 0 439 508 617124367 617124436 3.620000e-16 97.1
8 TraesCS2D01G057900 chr2A 86.642 3279 269 82 228 3411 24529458 24532662 0.000000e+00 3472.0
9 TraesCS2D01G057900 chr2A 90.449 356 28 4 1321 1672 269269170 269268817 8.610000e-127 464.0
10 TraesCS2D01G057900 chr2A 90.169 356 29 5 1321 1672 269306944 269306591 4.010000e-125 459.0
11 TraesCS2D01G057900 chr2A 91.935 62 5 0 1947 2008 240853474 240853535 2.180000e-13 87.9
12 TraesCS2D01G057900 chrUn 90.449 356 27 6 1321 1672 295944822 295944470 3.100000e-126 462.0
13 TraesCS2D01G057900 chrUn 90.423 355 26 6 1321 1669 265948088 265948440 1.110000e-125 460.0
14 TraesCS2D01G057900 chr4A 90.652 353 26 6 1321 1669 611288636 611288985 3.100000e-126 462.0
15 TraesCS2D01G057900 chr7A 90.169 356 29 4 1321 1672 199440437 199440084 4.010000e-125 459.0
16 TraesCS2D01G057900 chr7A 79.577 142 22 6 2279 2420 596721405 596721271 1.300000e-15 95.3
17 TraesCS2D01G057900 chr3A 90.169 356 29 4 1321 1672 689755375 689755022 4.010000e-125 459.0
18 TraesCS2D01G057900 chr6B 76.096 707 80 39 1348 2008 76042302 76042965 2.000000e-73 287.0
19 TraesCS2D01G057900 chr4B 93.082 159 10 1 63 221 63754003 63753846 9.510000e-57 231.0
20 TraesCS2D01G057900 chr4B 93.038 158 10 1 64 221 660120600 660120756 3.420000e-56 230.0
21 TraesCS2D01G057900 chr4B 93.103 116 8 0 1081 1196 597430845 597430730 2.100000e-38 171.0
22 TraesCS2D01G057900 chr3D 92.453 159 11 1 63 221 238999576 238999419 4.420000e-55 226.0
23 TraesCS2D01G057900 chr4D 92.405 158 10 2 64 221 58643757 58643912 1.590000e-54 224.0
24 TraesCS2D01G057900 chr4D 88.764 178 14 5 59 236 68663816 68663987 3.440000e-51 213.0
25 TraesCS2D01G057900 chr6D 90.588 170 12 2 63 232 422936566 422936401 5.720000e-54 222.0
26 TraesCS2D01G057900 chr5D 91.304 161 13 1 61 221 539915849 539916008 7.400000e-53 219.0
27 TraesCS2D01G057900 chr3B 74.815 135 32 1 3898 4032 207046129 207045997 4.750000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G057900 chr2D 22961326 22965722 4396 False 8120 8120 100.000 1 4397 1 chr2D.!!$F3 4396
1 TraesCS2D01G057900 chr2B 37428629 37432637 4008 True 4702 4702 88.278 435 4397 1 chr2B.!!$R1 3962
2 TraesCS2D01G057900 chr2A 24529458 24532662 3204 False 3472 3472 86.642 228 3411 1 chr2A.!!$F1 3183
3 TraesCS2D01G057900 chr6B 76042302 76042965 663 False 287 287 76.096 1348 2008 1 chr6B.!!$F1 660

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
584 625 0.026285 GCGATAAATCTGCGCGTGTT 59.974 50.0 8.43 0.0 41.37 3.32 F
1313 1414 0.474854 TAGGTTGCTTGAGGGGTGGA 60.475 55.0 0.00 0.0 0.00 4.02 F
1860 2005 0.321298 TTTGTACCAAGGGAGCGAGC 60.321 55.0 0.00 0.0 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1389 1495 0.109086 CTGATCCGAGTTCGCACTGT 60.109 55.0 0.0 0.0 38.18 3.55 R
2610 2816 0.036164 GCCACCACACATGTCACCTA 59.964 55.0 0.0 0.0 0.00 3.08 R
3508 3741 0.107165 GGGGATTCGGGTTCTGAAGG 60.107 60.0 0.0 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.341263 TGAGCGGTCTGTAGTCTGT 57.659 52.632 16.64 0.00 0.00 3.41
19 20 2.484742 TGAGCGGTCTGTAGTCTGTA 57.515 50.000 16.64 0.00 0.00 2.74
20 21 2.082231 TGAGCGGTCTGTAGTCTGTAC 58.918 52.381 16.64 0.00 0.00 2.90
21 22 1.062294 GAGCGGTCTGTAGTCTGTACG 59.938 57.143 7.51 0.00 0.00 3.67
22 23 1.081892 GCGGTCTGTAGTCTGTACGA 58.918 55.000 0.00 0.00 0.00 3.43
23 24 1.062294 GCGGTCTGTAGTCTGTACGAG 59.938 57.143 0.00 0.00 0.00 4.18
24 25 2.614779 CGGTCTGTAGTCTGTACGAGA 58.385 52.381 0.00 0.00 0.00 4.04
25 26 3.196463 CGGTCTGTAGTCTGTACGAGAT 58.804 50.000 0.00 0.00 31.63 2.75
26 27 3.245754 CGGTCTGTAGTCTGTACGAGATC 59.754 52.174 0.00 0.00 31.63 2.75
27 28 4.190001 GGTCTGTAGTCTGTACGAGATCA 58.810 47.826 0.00 0.00 31.63 2.92
28 29 4.034279 GGTCTGTAGTCTGTACGAGATCAC 59.966 50.000 0.00 0.00 31.63 3.06
29 30 4.630505 GTCTGTAGTCTGTACGAGATCACA 59.369 45.833 0.00 0.00 31.63 3.58
30 31 5.121925 GTCTGTAGTCTGTACGAGATCACAA 59.878 44.000 0.00 0.00 30.80 3.33
31 32 5.351740 TCTGTAGTCTGTACGAGATCACAAG 59.648 44.000 0.00 0.00 30.80 3.16
32 33 4.395231 TGTAGTCTGTACGAGATCACAAGG 59.605 45.833 0.00 0.00 31.63 3.61
33 34 2.164624 AGTCTGTACGAGATCACAAGGC 59.835 50.000 0.00 0.00 31.63 4.35
34 35 2.094700 GTCTGTACGAGATCACAAGGCA 60.095 50.000 0.00 0.00 31.63 4.75
35 36 2.164422 TCTGTACGAGATCACAAGGCAG 59.836 50.000 0.00 0.00 0.00 4.85
36 37 2.164422 CTGTACGAGATCACAAGGCAGA 59.836 50.000 0.00 0.00 0.00 4.26
37 38 2.164422 TGTACGAGATCACAAGGCAGAG 59.836 50.000 0.00 0.00 0.00 3.35
38 39 0.534412 ACGAGATCACAAGGCAGAGG 59.466 55.000 0.00 0.00 0.00 3.69
39 40 0.809241 CGAGATCACAAGGCAGAGGC 60.809 60.000 0.00 0.00 40.13 4.70
40 41 0.251354 GAGATCACAAGGCAGAGGCA 59.749 55.000 0.00 0.00 43.71 4.75
41 42 0.035630 AGATCACAAGGCAGAGGCAC 60.036 55.000 0.00 0.00 43.71 5.01
42 43 0.321919 GATCACAAGGCAGAGGCACA 60.322 55.000 0.00 0.00 43.71 4.57
43 44 0.111061 ATCACAAGGCAGAGGCACAA 59.889 50.000 0.00 0.00 43.71 3.33
44 45 0.106769 TCACAAGGCAGAGGCACAAA 60.107 50.000 0.00 0.00 43.71 2.83
45 46 0.746063 CACAAGGCAGAGGCACAAAA 59.254 50.000 0.00 0.00 43.71 2.44
46 47 1.342174 CACAAGGCAGAGGCACAAAAT 59.658 47.619 0.00 0.00 43.71 1.82
47 48 1.342174 ACAAGGCAGAGGCACAAAATG 59.658 47.619 0.00 0.00 43.71 2.32
48 49 1.342174 CAAGGCAGAGGCACAAAATGT 59.658 47.619 0.00 0.00 43.71 2.71
49 50 2.557924 CAAGGCAGAGGCACAAAATGTA 59.442 45.455 0.00 0.00 43.71 2.29
50 51 2.162681 AGGCAGAGGCACAAAATGTAC 58.837 47.619 0.00 0.00 43.71 2.90
51 52 2.162681 GGCAGAGGCACAAAATGTACT 58.837 47.619 0.00 0.00 43.71 2.73
52 53 2.162408 GGCAGAGGCACAAAATGTACTC 59.838 50.000 0.00 6.37 43.71 2.59
53 54 2.162408 GCAGAGGCACAAAATGTACTCC 59.838 50.000 9.42 1.10 40.72 3.85
54 55 3.679389 CAGAGGCACAAAATGTACTCCT 58.321 45.455 9.42 4.94 35.46 3.69
55 56 4.832248 CAGAGGCACAAAATGTACTCCTA 58.168 43.478 9.42 0.00 35.46 2.94
56 57 4.631813 CAGAGGCACAAAATGTACTCCTAC 59.368 45.833 9.42 0.00 35.46 3.18
57 58 4.286032 AGAGGCACAAAATGTACTCCTACA 59.714 41.667 9.42 0.00 35.46 2.74
58 59 5.045578 AGAGGCACAAAATGTACTCCTACAT 60.046 40.000 9.42 0.00 44.22 2.29
68 69 5.475273 TGTACTCCTACATTTCGTACTCG 57.525 43.478 0.00 0.00 33.47 4.18
69 70 3.417690 ACTCCTACATTTCGTACTCGC 57.582 47.619 0.00 0.00 36.96 5.03
70 71 3.015327 ACTCCTACATTTCGTACTCGCT 58.985 45.455 0.00 0.00 36.96 4.93
71 72 3.065095 ACTCCTACATTTCGTACTCGCTC 59.935 47.826 0.00 0.00 36.96 5.03
72 73 2.357009 TCCTACATTTCGTACTCGCTCC 59.643 50.000 0.00 0.00 36.96 4.70
73 74 2.373269 CTACATTTCGTACTCGCTCCG 58.627 52.381 0.00 0.00 36.96 4.63
74 75 0.524862 ACATTTCGTACTCGCTCCGT 59.475 50.000 0.00 0.00 36.96 4.69
75 76 1.068055 ACATTTCGTACTCGCTCCGTT 60.068 47.619 0.00 0.00 36.96 4.44
76 77 1.582502 CATTTCGTACTCGCTCCGTTC 59.417 52.381 0.00 0.00 36.96 3.95
77 78 0.109597 TTTCGTACTCGCTCCGTTCC 60.110 55.000 0.00 0.00 36.96 3.62
78 79 0.957395 TTCGTACTCGCTCCGTTCCT 60.957 55.000 0.00 0.00 36.96 3.36
79 80 0.108186 TCGTACTCGCTCCGTTCCTA 60.108 55.000 0.00 0.00 36.96 2.94
80 81 0.729116 CGTACTCGCTCCGTTCCTAA 59.271 55.000 0.00 0.00 0.00 2.69
81 82 1.131126 CGTACTCGCTCCGTTCCTAAA 59.869 52.381 0.00 0.00 0.00 1.85
82 83 2.223433 CGTACTCGCTCCGTTCCTAAAT 60.223 50.000 0.00 0.00 0.00 1.40
83 84 3.002656 CGTACTCGCTCCGTTCCTAAATA 59.997 47.826 0.00 0.00 0.00 1.40
84 85 3.433513 ACTCGCTCCGTTCCTAAATAC 57.566 47.619 0.00 0.00 0.00 1.89
85 86 2.756760 ACTCGCTCCGTTCCTAAATACA 59.243 45.455 0.00 0.00 0.00 2.29
86 87 3.194116 ACTCGCTCCGTTCCTAAATACAA 59.806 43.478 0.00 0.00 0.00 2.41
87 88 3.777478 TCGCTCCGTTCCTAAATACAAG 58.223 45.455 0.00 0.00 0.00 3.16
88 89 3.194116 TCGCTCCGTTCCTAAATACAAGT 59.806 43.478 0.00 0.00 0.00 3.16
89 90 3.550678 CGCTCCGTTCCTAAATACAAGTC 59.449 47.826 0.00 0.00 0.00 3.01
90 91 4.677250 CGCTCCGTTCCTAAATACAAGTCT 60.677 45.833 0.00 0.00 0.00 3.24
91 92 5.176592 GCTCCGTTCCTAAATACAAGTCTT 58.823 41.667 0.00 0.00 0.00 3.01
92 93 5.642491 GCTCCGTTCCTAAATACAAGTCTTT 59.358 40.000 0.00 0.00 0.00 2.52
93 94 6.148976 GCTCCGTTCCTAAATACAAGTCTTTT 59.851 38.462 0.00 0.00 0.00 2.27
94 95 7.429636 TCCGTTCCTAAATACAAGTCTTTTG 57.570 36.000 0.00 0.00 0.00 2.44
95 96 6.993902 TCCGTTCCTAAATACAAGTCTTTTGT 59.006 34.615 0.00 0.00 36.49 2.83
96 97 8.149647 TCCGTTCCTAAATACAAGTCTTTTGTA 58.850 33.333 2.61 2.61 38.99 2.41
97 98 8.440833 CCGTTCCTAAATACAAGTCTTTTGTAG 58.559 37.037 6.02 0.00 38.17 2.74
98 99 9.199982 CGTTCCTAAATACAAGTCTTTTGTAGA 57.800 33.333 6.02 0.00 38.17 2.59
105 106 9.793259 AAATACAAGTCTTTTGTAGAGATTCCA 57.207 29.630 6.02 0.00 38.17 3.53
106 107 8.779354 ATACAAGTCTTTTGTAGAGATTCCAC 57.221 34.615 6.02 0.00 38.17 4.02
107 108 6.831976 ACAAGTCTTTTGTAGAGATTCCACT 58.168 36.000 0.00 0.00 32.23 4.00
108 109 7.963532 ACAAGTCTTTTGTAGAGATTCCACTA 58.036 34.615 0.00 0.00 32.23 2.74
109 110 8.598041 ACAAGTCTTTTGTAGAGATTCCACTAT 58.402 33.333 0.00 0.00 32.23 2.12
110 111 8.877779 CAAGTCTTTTGTAGAGATTCCACTATG 58.122 37.037 0.00 0.00 32.23 2.23
111 112 8.367660 AGTCTTTTGTAGAGATTCCACTATGA 57.632 34.615 0.00 0.00 32.23 2.15
112 113 8.816894 AGTCTTTTGTAGAGATTCCACTATGAA 58.183 33.333 0.00 0.00 32.23 2.57
113 114 8.874816 GTCTTTTGTAGAGATTCCACTATGAAC 58.125 37.037 0.00 0.00 32.23 3.18
114 115 8.816894 TCTTTTGTAGAGATTCCACTATGAACT 58.183 33.333 0.00 0.00 0.00 3.01
116 117 9.871238 TTTTGTAGAGATTCCACTATGAACTAC 57.129 33.333 0.00 0.00 0.00 2.73
117 118 8.589701 TTGTAGAGATTCCACTATGAACTACA 57.410 34.615 0.00 0.00 33.29 2.74
118 119 7.997482 TGTAGAGATTCCACTATGAACTACAC 58.003 38.462 0.00 0.00 31.66 2.90
119 120 7.614192 TGTAGAGATTCCACTATGAACTACACA 59.386 37.037 0.00 0.00 31.66 3.72
120 121 6.868622 AGAGATTCCACTATGAACTACACAC 58.131 40.000 0.00 0.00 0.00 3.82
121 122 5.651530 AGATTCCACTATGAACTACACACG 58.348 41.667 0.00 0.00 0.00 4.49
122 123 3.861276 TCCACTATGAACTACACACGG 57.139 47.619 0.00 0.00 0.00 4.94
123 124 3.423749 TCCACTATGAACTACACACGGA 58.576 45.455 0.00 0.00 0.00 4.69
124 125 3.442625 TCCACTATGAACTACACACGGAG 59.557 47.826 0.00 0.00 0.00 4.63
125 126 3.179830 CACTATGAACTACACACGGAGC 58.820 50.000 0.00 0.00 0.00 4.70
126 127 2.823747 ACTATGAACTACACACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
127 128 2.831685 ATGAACTACACACGGAGCAA 57.168 45.000 0.00 0.00 0.00 3.91
128 129 2.605837 TGAACTACACACGGAGCAAA 57.394 45.000 0.00 0.00 0.00 3.68
129 130 2.907634 TGAACTACACACGGAGCAAAA 58.092 42.857 0.00 0.00 0.00 2.44
130 131 3.472652 TGAACTACACACGGAGCAAAAT 58.527 40.909 0.00 0.00 0.00 1.82
131 132 3.249799 TGAACTACACACGGAGCAAAATG 59.750 43.478 0.00 0.00 0.00 2.32
132 133 3.120321 ACTACACACGGAGCAAAATGA 57.880 42.857 0.00 0.00 0.00 2.57
133 134 3.067106 ACTACACACGGAGCAAAATGAG 58.933 45.455 0.00 0.00 0.00 2.90
134 135 1.967319 ACACACGGAGCAAAATGAGT 58.033 45.000 0.00 0.00 0.00 3.41
135 136 1.603802 ACACACGGAGCAAAATGAGTG 59.396 47.619 0.00 0.00 35.89 3.51
136 137 1.872952 CACACGGAGCAAAATGAGTGA 59.127 47.619 0.19 0.00 34.16 3.41
137 138 2.290367 CACACGGAGCAAAATGAGTGAA 59.710 45.455 0.19 0.00 34.16 3.18
138 139 3.058016 CACACGGAGCAAAATGAGTGAAT 60.058 43.478 0.19 0.00 34.16 2.57
139 140 3.189287 ACACGGAGCAAAATGAGTGAATC 59.811 43.478 0.19 0.00 34.16 2.52
140 141 3.438087 CACGGAGCAAAATGAGTGAATCT 59.562 43.478 0.00 0.00 0.00 2.40
141 142 4.631377 CACGGAGCAAAATGAGTGAATCTA 59.369 41.667 0.00 0.00 0.00 1.98
142 143 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
143 144 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
144 145 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
157 158 8.430801 AGTGAATCTACACTCTAAAATGCATC 57.569 34.615 0.00 0.00 46.36 3.91
158 159 8.263640 AGTGAATCTACACTCTAAAATGCATCT 58.736 33.333 0.00 0.00 46.36 2.90
159 160 8.333908 GTGAATCTACACTCTAAAATGCATCTG 58.666 37.037 0.00 0.00 37.73 2.90
160 161 8.043113 TGAATCTACACTCTAAAATGCATCTGT 58.957 33.333 0.00 0.00 0.00 3.41
161 162 9.534565 GAATCTACACTCTAAAATGCATCTGTA 57.465 33.333 0.00 0.00 0.00 2.74
164 165 9.967346 TCTACACTCTAAAATGCATCTGTATAC 57.033 33.333 0.00 0.00 0.00 1.47
165 166 7.700322 ACACTCTAAAATGCATCTGTATACG 57.300 36.000 0.00 0.00 0.00 3.06
166 167 7.265673 ACACTCTAAAATGCATCTGTATACGT 58.734 34.615 0.00 0.00 0.00 3.57
167 168 7.435488 ACACTCTAAAATGCATCTGTATACGTC 59.565 37.037 0.00 0.00 0.00 4.34
168 169 6.924060 ACTCTAAAATGCATCTGTATACGTCC 59.076 38.462 0.00 0.00 0.00 4.79
169 170 5.918576 TCTAAAATGCATCTGTATACGTCCG 59.081 40.000 0.00 0.00 0.00 4.79
170 171 3.728076 AATGCATCTGTATACGTCCGT 57.272 42.857 0.00 0.00 0.00 4.69
171 172 4.841443 AATGCATCTGTATACGTCCGTA 57.159 40.909 0.00 1.60 34.87 4.02
172 173 5.386958 AATGCATCTGTATACGTCCGTAT 57.613 39.130 15.73 15.73 43.04 3.06
173 174 4.155310 TGCATCTGTATACGTCCGTATG 57.845 45.455 19.58 7.85 40.98 2.39
174 175 3.566742 TGCATCTGTATACGTCCGTATGT 59.433 43.478 19.58 1.03 40.98 2.29
175 176 3.912563 GCATCTGTATACGTCCGTATGTG 59.087 47.826 19.58 12.01 40.98 3.21
176 177 4.473199 CATCTGTATACGTCCGTATGTGG 58.527 47.826 19.58 10.48 40.98 4.17
177 178 3.544684 TCTGTATACGTCCGTATGTGGT 58.455 45.455 19.58 0.00 40.98 4.16
178 179 3.947196 TCTGTATACGTCCGTATGTGGTT 59.053 43.478 19.58 0.00 40.98 3.67
179 180 4.035558 TCTGTATACGTCCGTATGTGGTTC 59.964 45.833 19.58 6.40 40.98 3.62
180 181 3.693578 TGTATACGTCCGTATGTGGTTCA 59.306 43.478 19.58 8.31 40.98 3.18
181 182 4.338964 TGTATACGTCCGTATGTGGTTCAT 59.661 41.667 19.58 0.00 40.98 2.57
182 183 5.530543 TGTATACGTCCGTATGTGGTTCATA 59.469 40.000 19.58 0.00 40.98 2.15
183 184 3.431922 ACGTCCGTATGTGGTTCATAG 57.568 47.619 0.00 0.00 39.36 2.23
184 185 2.756760 ACGTCCGTATGTGGTTCATAGT 59.243 45.455 0.00 0.00 39.36 2.12
185 186 3.113322 CGTCCGTATGTGGTTCATAGTG 58.887 50.000 0.00 0.00 39.36 2.74
186 187 3.181494 CGTCCGTATGTGGTTCATAGTGA 60.181 47.826 0.00 0.00 39.36 3.41
187 188 4.360563 GTCCGTATGTGGTTCATAGTGAG 58.639 47.826 0.00 0.00 39.36 3.51
188 189 4.097437 GTCCGTATGTGGTTCATAGTGAGA 59.903 45.833 0.00 0.00 39.36 3.27
189 190 4.893524 TCCGTATGTGGTTCATAGTGAGAT 59.106 41.667 0.00 0.00 39.36 2.75
190 191 5.009710 TCCGTATGTGGTTCATAGTGAGATC 59.990 44.000 0.00 0.00 39.36 2.75
191 192 5.010112 CCGTATGTGGTTCATAGTGAGATCT 59.990 44.000 0.00 0.00 39.36 2.75
192 193 6.146216 CGTATGTGGTTCATAGTGAGATCTC 58.854 44.000 16.21 16.21 39.36 2.75
193 194 6.016693 CGTATGTGGTTCATAGTGAGATCTCT 60.017 42.308 22.95 6.99 39.36 3.10
194 195 5.588958 TGTGGTTCATAGTGAGATCTCTG 57.411 43.478 22.95 13.04 0.00 3.35
195 196 4.142071 TGTGGTTCATAGTGAGATCTCTGC 60.142 45.833 22.95 15.34 0.00 4.26
196 197 4.026052 TGGTTCATAGTGAGATCTCTGCA 58.974 43.478 22.95 8.50 0.00 4.41
197 198 4.467438 TGGTTCATAGTGAGATCTCTGCAA 59.533 41.667 22.95 7.12 0.00 4.08
198 199 5.046376 TGGTTCATAGTGAGATCTCTGCAAA 60.046 40.000 22.95 7.77 0.00 3.68
199 200 5.523188 GGTTCATAGTGAGATCTCTGCAAAG 59.477 44.000 22.95 9.27 0.00 2.77
200 201 6.336566 GTTCATAGTGAGATCTCTGCAAAGA 58.663 40.000 22.95 11.24 0.00 2.52
201 202 5.900425 TCATAGTGAGATCTCTGCAAAGAC 58.100 41.667 22.95 11.09 0.00 3.01
202 203 5.655974 TCATAGTGAGATCTCTGCAAAGACT 59.344 40.000 22.95 17.16 0.00 3.24
203 204 4.888326 AGTGAGATCTCTGCAAAGACTT 57.112 40.909 22.95 0.06 0.00 3.01
204 205 4.567971 AGTGAGATCTCTGCAAAGACTTG 58.432 43.478 22.95 0.00 35.49 3.16
205 206 4.040217 AGTGAGATCTCTGCAAAGACTTGT 59.960 41.667 22.95 0.00 34.79 3.16
206 207 5.244851 AGTGAGATCTCTGCAAAGACTTGTA 59.755 40.000 22.95 0.00 34.79 2.41
207 208 6.070881 AGTGAGATCTCTGCAAAGACTTGTAT 60.071 38.462 22.95 0.00 34.79 2.29
208 209 6.593382 GTGAGATCTCTGCAAAGACTTGTATT 59.407 38.462 22.95 0.00 34.79 1.89
209 210 7.118971 GTGAGATCTCTGCAAAGACTTGTATTT 59.881 37.037 22.95 0.00 34.79 1.40
210 211 8.314021 TGAGATCTCTGCAAAGACTTGTATTTA 58.686 33.333 22.95 0.00 34.79 1.40
211 212 8.715191 AGATCTCTGCAAAGACTTGTATTTAG 57.285 34.615 0.00 0.00 34.79 1.85
212 213 7.768120 AGATCTCTGCAAAGACTTGTATTTAGG 59.232 37.037 0.00 0.00 34.79 2.69
213 214 7.004555 TCTCTGCAAAGACTTGTATTTAGGA 57.995 36.000 0.00 0.00 34.79 2.94
214 215 7.450074 TCTCTGCAAAGACTTGTATTTAGGAA 58.550 34.615 0.00 0.00 34.79 3.36
215 216 7.387948 TCTCTGCAAAGACTTGTATTTAGGAAC 59.612 37.037 0.00 0.00 34.79 3.62
216 217 6.147164 TCTGCAAAGACTTGTATTTAGGAACG 59.853 38.462 0.00 0.00 34.79 3.95
217 218 5.180492 TGCAAAGACTTGTATTTAGGAACGG 59.820 40.000 0.00 0.00 34.79 4.44
218 219 5.410439 GCAAAGACTTGTATTTAGGAACGGA 59.590 40.000 0.00 0.00 34.79 4.69
219 220 6.402226 GCAAAGACTTGTATTTAGGAACGGAG 60.402 42.308 0.00 0.00 34.79 4.63
220 221 5.340439 AGACTTGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
221 222 5.021458 AGACTTGTATTTAGGAACGGAGGA 58.979 41.667 0.00 0.00 0.00 3.71
222 223 5.127356 AGACTTGTATTTAGGAACGGAGGAG 59.873 44.000 0.00 0.00 0.00 3.69
223 224 4.161754 ACTTGTATTTAGGAACGGAGGAGG 59.838 45.833 0.00 0.00 0.00 4.30
224 225 3.036091 TGTATTTAGGAACGGAGGAGGG 58.964 50.000 0.00 0.00 0.00 4.30
225 226 2.563039 ATTTAGGAACGGAGGAGGGA 57.437 50.000 0.00 0.00 0.00 4.20
226 227 1.861982 TTTAGGAACGGAGGAGGGAG 58.138 55.000 0.00 0.00 0.00 4.30
251 252 6.403866 AGTTGACATGCTTGACCAAAAATA 57.596 33.333 6.60 0.00 0.00 1.40
265 266 8.862325 TGACCAAAAATATAAAAGCAGAGAGA 57.138 30.769 0.00 0.00 0.00 3.10
266 267 8.730680 TGACCAAAAATATAAAAGCAGAGAGAC 58.269 33.333 0.00 0.00 0.00 3.36
267 268 8.056407 ACCAAAAATATAAAAGCAGAGAGACC 57.944 34.615 0.00 0.00 0.00 3.85
268 269 7.890655 ACCAAAAATATAAAAGCAGAGAGACCT 59.109 33.333 0.00 0.00 0.00 3.85
269 270 8.186821 CCAAAAATATAAAAGCAGAGAGACCTG 58.813 37.037 0.00 0.00 37.23 4.00
276 277 1.510383 CAGAGAGACCTGCACCGAG 59.490 63.158 0.00 0.00 0.00 4.63
278 279 3.363844 GAGAGACCTGCACCGAGGC 62.364 68.421 0.00 0.00 36.46 4.70
279 280 3.386237 GAGACCTGCACCGAGGCT 61.386 66.667 0.00 0.00 36.46 4.58
280 281 2.037367 AGACCTGCACCGAGGCTA 59.963 61.111 0.00 0.00 36.46 3.93
281 282 1.605058 GAGACCTGCACCGAGGCTAA 61.605 60.000 0.00 0.00 36.46 3.09
282 283 1.448013 GACCTGCACCGAGGCTAAC 60.448 63.158 0.00 0.00 36.46 2.34
283 284 1.889530 GACCTGCACCGAGGCTAACT 61.890 60.000 0.00 0.00 36.46 2.24
285 286 1.448540 CTGCACCGAGGCTAACTGG 60.449 63.158 0.00 0.00 34.04 4.00
286 287 2.172483 CTGCACCGAGGCTAACTGGT 62.172 60.000 0.00 0.00 32.90 4.00
287 288 1.741770 GCACCGAGGCTAACTGGTG 60.742 63.158 18.23 18.23 44.39 4.17
289 290 2.291043 ACCGAGGCTAACTGGTGGG 61.291 63.158 0.00 0.00 31.94 4.61
299 312 1.549203 AACTGGTGGGCACATGATTC 58.451 50.000 0.00 0.00 0.00 2.52
320 333 1.898574 CTGCCCACACAACCCTGAC 60.899 63.158 0.00 0.00 0.00 3.51
338 351 2.177950 CCACTCATGGCTCAACAGC 58.822 57.895 0.00 0.00 46.06 4.40
371 402 2.811317 GCAGCACGGAGGAAGTCG 60.811 66.667 0.00 0.00 0.00 4.18
416 454 4.798344 CAGGGCAGGGCAGAGCAG 62.798 72.222 0.00 0.00 0.00 4.24
429 467 1.939785 GAGCAGCGTACCGTCATCG 60.940 63.158 0.00 0.00 0.00 3.84
508 546 1.446099 GACCGCGAGATCTGCACAA 60.446 57.895 8.23 0.00 0.00 3.33
519 557 4.054085 TGCACAACAGAGCAGAGC 57.946 55.556 0.00 0.00 35.51 4.09
533 571 2.436292 GAGCAGAGCAGCACCCAG 60.436 66.667 0.00 0.00 36.85 4.45
546 584 0.107456 CACCCAGTCAGTTGAGCACT 59.893 55.000 0.00 0.00 35.35 4.40
554 595 1.102809 CAGTTGAGCACTGCCACCAA 61.103 55.000 0.00 0.00 46.70 3.67
558 599 0.106769 TGAGCACTGCCACCAAGAAA 60.107 50.000 0.00 0.00 0.00 2.52
559 600 1.032014 GAGCACTGCCACCAAGAAAA 58.968 50.000 0.00 0.00 0.00 2.29
562 603 2.036346 AGCACTGCCACCAAGAAAAATC 59.964 45.455 0.00 0.00 0.00 2.17
569 610 2.493278 CCACCAAGAAAAATCCAGCGAT 59.507 45.455 0.00 0.00 0.00 4.58
574 615 6.473455 CACCAAGAAAAATCCAGCGATAAATC 59.527 38.462 0.00 0.00 0.00 2.17
575 616 6.378280 ACCAAGAAAAATCCAGCGATAAATCT 59.622 34.615 0.00 0.00 0.00 2.40
576 617 6.694411 CCAAGAAAAATCCAGCGATAAATCTG 59.306 38.462 0.00 0.00 0.00 2.90
577 618 5.825507 AGAAAAATCCAGCGATAAATCTGC 58.174 37.500 0.00 0.50 0.00 4.26
578 619 3.885484 AAATCCAGCGATAAATCTGCG 57.115 42.857 0.00 0.00 33.67 5.18
583 624 1.636340 GCGATAAATCTGCGCGTGT 59.364 52.632 8.43 0.00 41.37 4.49
584 625 0.026285 GCGATAAATCTGCGCGTGTT 59.974 50.000 8.43 0.00 41.37 3.32
585 626 1.256895 GCGATAAATCTGCGCGTGTTA 59.743 47.619 8.43 0.00 41.37 2.41
586 627 2.875633 CGATAAATCTGCGCGTGTTAC 58.124 47.619 8.43 0.00 0.00 2.50
588 629 2.081725 TAAATCTGCGCGTGTTACCA 57.918 45.000 8.43 0.00 0.00 3.25
589 630 1.231221 AAATCTGCGCGTGTTACCAA 58.769 45.000 8.43 0.00 0.00 3.67
590 631 0.515564 AATCTGCGCGTGTTACCAAC 59.484 50.000 8.43 0.00 0.00 3.77
597 638 1.007502 CGTGTTACCAACGGACGGA 60.008 57.895 0.00 0.00 37.39 4.69
603 644 3.677648 CCAACGGACGGACGGACT 61.678 66.667 6.00 0.00 38.39 3.85
604 645 2.334946 CCAACGGACGGACGGACTA 61.335 63.158 6.00 0.00 38.39 2.59
959 1034 1.228154 GGGCCCAAACAGAACGACT 60.228 57.895 19.95 0.00 0.00 4.18
1064 1152 2.427245 CGGAAGGGAGAGCCACGAT 61.427 63.158 0.00 0.00 35.15 3.73
1197 1285 4.022849 CCTGCCAAAGGTGAGTTCTTTTAG 60.023 45.833 0.00 0.00 41.74 1.85
1198 1286 4.787551 TGCCAAAGGTGAGTTCTTTTAGA 58.212 39.130 0.00 0.00 32.72 2.10
1203 1291 5.632034 AAGGTGAGTTCTTTTAGACCTGT 57.368 39.130 0.00 0.00 34.02 4.00
1204 1292 4.962155 AGGTGAGTTCTTTTAGACCTGTG 58.038 43.478 0.00 0.00 32.48 3.66
1205 1293 4.409247 AGGTGAGTTCTTTTAGACCTGTGT 59.591 41.667 0.00 0.00 32.48 3.72
1240 1328 0.817013 TCATTTCGGGGCTGCAAATC 59.183 50.000 0.50 0.00 0.00 2.17
1243 1331 2.756321 TTTCGGGGCTGCAAATCGGA 62.756 55.000 0.50 0.00 0.00 4.55
1288 1389 4.264253 TCAGATAGGCAGAATTGGTTGTG 58.736 43.478 0.00 0.00 0.00 3.33
1307 1408 2.749621 GTGGTTCATAGGTTGCTTGAGG 59.250 50.000 0.00 0.00 0.00 3.86
1308 1409 2.290896 TGGTTCATAGGTTGCTTGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
1309 1410 2.369394 GTTCATAGGTTGCTTGAGGGG 58.631 52.381 0.00 0.00 0.00 4.79
1310 1411 1.668826 TCATAGGTTGCTTGAGGGGT 58.331 50.000 0.00 0.00 0.00 4.95
1311 1412 1.281867 TCATAGGTTGCTTGAGGGGTG 59.718 52.381 0.00 0.00 0.00 4.61
1313 1414 0.474854 TAGGTTGCTTGAGGGGTGGA 60.475 55.000 0.00 0.00 0.00 4.02
1317 1418 3.732849 GCTTGAGGGGTGGAGGGG 61.733 72.222 0.00 0.00 0.00 4.79
1389 1495 8.289618 GCTGAGAATGTTTTCTTATGTGTGTTA 58.710 33.333 0.00 0.00 42.34 2.41
1529 1647 3.270027 TCTGTTTCAGCCATACAATCCG 58.730 45.455 0.00 0.00 0.00 4.18
1573 1692 5.419542 GCAAATACTGGAGACACTGTCATA 58.580 41.667 11.80 0.00 34.60 2.15
1580 1704 6.577103 ACTGGAGACACTGTCATACATATTG 58.423 40.000 11.80 0.00 34.60 1.90
1593 1717 6.594159 GTCATACATATTGGGCATGGTAGTAC 59.406 42.308 0.00 0.00 0.00 2.73
1628 1752 2.571212 ACGGTCTTGCAACATCTTCAA 58.429 42.857 0.00 0.00 0.00 2.69
1632 1756 4.984161 CGGTCTTGCAACATCTTCAAAAAT 59.016 37.500 0.00 0.00 0.00 1.82
1798 1943 8.587952 AACAGTACCATTCTGCAAAATAAAAC 57.412 30.769 0.00 0.00 36.50 2.43
1832 1977 2.477845 AAGGGGCATGAACAATTTGC 57.522 45.000 0.00 0.00 35.64 3.68
1834 1979 1.360931 GGGGCATGAACAATTTGCGC 61.361 55.000 0.00 0.00 45.43 6.09
1858 2003 2.642154 TTTTTGTACCAAGGGAGCGA 57.358 45.000 0.00 0.00 0.00 4.93
1859 2004 2.178912 TTTTGTACCAAGGGAGCGAG 57.821 50.000 0.00 0.00 0.00 5.03
1860 2005 0.321298 TTTGTACCAAGGGAGCGAGC 60.321 55.000 0.00 0.00 0.00 5.03
1861 2006 2.202756 GTACCAAGGGAGCGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
1920 2079 3.449322 TGCGCGTTTTCTTTCTCATAC 57.551 42.857 8.43 0.00 0.00 2.39
1925 2088 4.201628 CGCGTTTTCTTTCTCATACAGGAG 60.202 45.833 0.00 0.00 36.21 3.69
1947 2110 6.127026 GGAGGAAGAAAGTATTAGCTCCAGAA 60.127 42.308 0.00 0.00 0.00 3.02
1956 2119 7.430760 AGTATTAGCTCCAGAAGAAGATGTT 57.569 36.000 0.00 0.00 0.00 2.71
2015 2178 1.513160 CCCAACGTTTTATGCGCCG 60.513 57.895 4.18 1.64 0.00 6.46
2018 2181 1.466697 CCAACGTTTTATGCGCCGAAT 60.467 47.619 4.18 0.00 0.00 3.34
2060 2223 3.578688 GAACAAGCCTGGCATACAAAAG 58.421 45.455 22.65 0.00 0.00 2.27
2140 2303 4.902448 ACCCTGGTCTCCTTCTATGTTATC 59.098 45.833 0.00 0.00 0.00 1.75
2345 2516 3.890674 GCCACCTGCTTTACCTCG 58.109 61.111 0.00 0.00 36.87 4.63
2409 2580 4.020928 TGTCAGGCCTTACTCGACAATTTA 60.021 41.667 17.94 0.00 33.86 1.40
2410 2581 4.329256 GTCAGGCCTTACTCGACAATTTAC 59.671 45.833 0.00 0.00 0.00 2.01
2412 2583 4.935808 CAGGCCTTACTCGACAATTTACTT 59.064 41.667 0.00 0.00 0.00 2.24
2426 2597 7.903431 CGACAATTTACTTTTAGTATCCTGCAC 59.097 37.037 0.00 0.00 29.64 4.57
2509 2691 5.909610 GTGTATGACAAGAAAACAAGAGTGC 59.090 40.000 0.00 0.00 0.00 4.40
2511 2693 3.620488 TGACAAGAAAACAAGAGTGCCT 58.380 40.909 0.00 0.00 0.00 4.75
2519 2701 7.530426 AGAAAACAAGAGTGCCTATTTCATT 57.470 32.000 0.00 0.00 30.68 2.57
2530 2712 9.860898 GAGTGCCTATTTCATTTTATTTTCTGT 57.139 29.630 0.00 0.00 0.00 3.41
2548 2753 8.496872 TTTTCTGTAATGTTTTACTTTAGCGC 57.503 30.769 0.00 0.00 38.81 5.92
2582 2787 7.497249 GTCATCAAGCTTGTAGAATGTATTCCT 59.503 37.037 25.19 0.00 37.51 3.36
2606 2812 7.496591 CCTTGAATGATATTTCAACCATTTGGG 59.503 37.037 0.96 0.00 39.91 4.12
2607 2813 6.887013 TGAATGATATTTCAACCATTTGGGG 58.113 36.000 0.96 0.00 35.57 4.96
2722 2928 5.140454 TGCTATGGTATGCTCTACTCTTGA 58.860 41.667 0.00 0.00 0.00 3.02
2739 2945 7.440523 ACTCTTGATTTAGTGATTTGGTGTC 57.559 36.000 0.00 0.00 0.00 3.67
2742 2948 7.685481 TCTTGATTTAGTGATTTGGTGTCCTA 58.315 34.615 0.00 0.00 0.00 2.94
2755 2961 6.817765 TTGGTGTCCTACATTTTCAGAATC 57.182 37.500 0.00 0.00 0.00 2.52
2802 3009 6.923928 AGTGTAGTTCTCCGTATCTAAGAC 57.076 41.667 0.00 0.00 0.00 3.01
2854 3061 6.422701 ACATCGATCGTTTGTAGTTTTCTTCA 59.577 34.615 19.75 0.00 0.00 3.02
2857 3064 5.332055 CGATCGTTTGTAGTTTTCTTCACGT 60.332 40.000 7.03 0.00 0.00 4.49
2904 3122 2.550830 TTCAGTCAAGTCAGCCCTTC 57.449 50.000 0.00 0.00 0.00 3.46
2905 3123 1.722034 TCAGTCAAGTCAGCCCTTCT 58.278 50.000 0.00 0.00 0.00 2.85
2908 3126 1.622811 AGTCAAGTCAGCCCTTCTCTG 59.377 52.381 0.00 0.00 0.00 3.35
2926 3144 6.522625 TCTCTGTTTCAAACAACAAATGGA 57.477 33.333 4.13 0.00 41.61 3.41
2943 3161 6.424812 ACAAATGGACATAAAAGCTTTTCTGC 59.575 34.615 27.80 21.56 30.18 4.26
2958 3177 6.146673 AGCTTTTCTGCATACATTTTCTTTGC 59.853 34.615 0.00 0.00 34.99 3.68
2977 3196 5.539582 TTGCCTGTTTACATGTCGATTAC 57.460 39.130 0.00 0.00 0.00 1.89
3027 3246 1.467734 CTCTGATCTGTGTTTGCCTGC 59.532 52.381 0.00 0.00 0.00 4.85
3061 3280 1.452833 GAAGCTGGTCTGCCCCATC 60.453 63.158 0.00 0.00 33.00 3.51
3458 3682 5.464722 CAGGTCTCAATGTCTCATAAATCCG 59.535 44.000 0.00 0.00 0.00 4.18
3469 3693 6.071560 TGTCTCATAAATCCGTACACTTCAGT 60.072 38.462 0.00 0.00 0.00 3.41
3470 3694 6.472808 GTCTCATAAATCCGTACACTTCAGTC 59.527 42.308 0.00 0.00 0.00 3.51
3499 3732 3.810896 GTGGCCGTGCGAATTCCC 61.811 66.667 0.00 0.00 0.00 3.97
3506 3739 2.794631 GCCGTGCGAATTCCCTAATTTG 60.795 50.000 0.00 0.00 38.87 2.32
3507 3740 2.223479 CCGTGCGAATTCCCTAATTTGG 60.223 50.000 0.00 0.00 37.08 3.28
3508 3741 2.794631 CGTGCGAATTCCCTAATTTGGC 60.795 50.000 0.00 0.00 37.08 4.52
3509 3742 1.754226 TGCGAATTCCCTAATTTGGCC 59.246 47.619 0.00 0.00 37.08 5.36
3510 3743 2.031870 GCGAATTCCCTAATTTGGCCT 58.968 47.619 3.32 0.00 37.08 5.19
3511 3744 2.430694 GCGAATTCCCTAATTTGGCCTT 59.569 45.455 3.32 0.00 37.08 4.35
3512 3745 3.490933 GCGAATTCCCTAATTTGGCCTTC 60.491 47.826 3.32 2.70 37.08 3.46
3513 3746 3.699038 CGAATTCCCTAATTTGGCCTTCA 59.301 43.478 3.32 0.00 35.41 3.02
3514 3747 4.202050 CGAATTCCCTAATTTGGCCTTCAG 60.202 45.833 3.32 0.00 35.41 3.02
3515 3748 4.608170 ATTCCCTAATTTGGCCTTCAGA 57.392 40.909 3.32 0.00 0.00 3.27
3516 3749 4.396357 TTCCCTAATTTGGCCTTCAGAA 57.604 40.909 3.32 0.00 0.00 3.02
3517 3750 3.697166 TCCCTAATTTGGCCTTCAGAAC 58.303 45.455 3.32 0.00 0.00 3.01
3518 3751 2.760650 CCCTAATTTGGCCTTCAGAACC 59.239 50.000 3.32 0.00 0.00 3.62
3519 3752 2.760650 CCTAATTTGGCCTTCAGAACCC 59.239 50.000 3.32 0.00 0.00 4.11
3520 3753 1.256812 AATTTGGCCTTCAGAACCCG 58.743 50.000 3.32 0.00 0.00 5.28
3521 3754 0.404040 ATTTGGCCTTCAGAACCCGA 59.596 50.000 3.32 0.00 0.00 5.14
3522 3755 0.183971 TTTGGCCTTCAGAACCCGAA 59.816 50.000 3.32 0.00 0.00 4.30
3523 3756 0.404040 TTGGCCTTCAGAACCCGAAT 59.596 50.000 3.32 0.00 0.00 3.34
3524 3757 0.035439 TGGCCTTCAGAACCCGAATC 60.035 55.000 3.32 0.00 0.00 2.52
3525 3758 0.748367 GGCCTTCAGAACCCGAATCC 60.748 60.000 0.00 0.00 0.00 3.01
3526 3759 0.748367 GCCTTCAGAACCCGAATCCC 60.748 60.000 0.00 0.00 0.00 3.85
3527 3760 0.107165 CCTTCAGAACCCGAATCCCC 60.107 60.000 0.00 0.00 0.00 4.81
3528 3761 0.912486 CTTCAGAACCCGAATCCCCT 59.088 55.000 0.00 0.00 0.00 4.79
3529 3762 1.282157 CTTCAGAACCCGAATCCCCTT 59.718 52.381 0.00 0.00 0.00 3.95
3537 3770 1.005450 CCCGAATCCCCTTTTCCTTCA 59.995 52.381 0.00 0.00 0.00 3.02
3559 3792 2.550208 GGTCGTGGAATGAAGTGAACCT 60.550 50.000 0.00 0.00 30.74 3.50
3741 3979 1.533625 TTGGCCATCTTGTTCCTTCG 58.466 50.000 6.09 0.00 0.00 3.79
3784 4022 3.430895 GCTTCACAAATGCATTGAACCAG 59.569 43.478 13.82 8.11 41.85 4.00
3818 4056 0.950555 GACACATGCCAACGCTCTCA 60.951 55.000 0.00 0.00 35.36 3.27
3838 4076 2.455674 TGATGAGAACTTCACCACCG 57.544 50.000 0.00 0.00 38.99 4.94
3854 4092 2.618302 CCACCGTCAAGAGGAGACTAGA 60.618 54.545 0.00 0.00 44.43 2.43
3908 4146 5.451242 GCAAACAAATAACTGACCAGGTGAA 60.451 40.000 0.00 0.00 0.00 3.18
3909 4147 5.767816 AACAAATAACTGACCAGGTGAAC 57.232 39.130 0.00 0.00 0.00 3.18
3960 4198 5.132897 TGATAAATTGGTTGTGCCTTCAC 57.867 39.130 0.00 0.00 43.40 3.18
3978 4216 5.515886 CCTTCACCCCCTTTATTGTTGACTA 60.516 44.000 0.00 0.00 0.00 2.59
4016 4254 2.802816 CGAGGGAAGTCAACAGTCTTTG 59.197 50.000 0.00 0.00 0.00 2.77
4022 4260 2.748605 AGTCAACAGTCTTTGAGCTCG 58.251 47.619 9.64 0.00 36.15 5.03
4086 4324 7.865706 TCTAAACTTTTCAGAATATGCCTCC 57.134 36.000 0.00 0.00 0.00 4.30
4108 4346 0.387565 TCTTTTGCTTTTCCGCCACC 59.612 50.000 0.00 0.00 0.00 4.61
4109 4347 0.103937 CTTTTGCTTTTCCGCCACCA 59.896 50.000 0.00 0.00 0.00 4.17
4150 4388 6.809196 GTGGAAATGAGCTATACGATTAGAGG 59.191 42.308 0.00 0.00 0.00 3.69
4172 4410 4.004314 GCTCCTTGAAGTCTACTTTTCCC 58.996 47.826 0.00 0.00 36.11 3.97
4199 4437 3.947910 AAGACCTTGCATCATTTGGTG 57.052 42.857 0.00 0.00 0.00 4.17
4205 4443 2.151881 TGCATCATTTGGTGTTGTGC 57.848 45.000 0.00 0.00 34.65 4.57
4252 4490 3.548214 GGAAAGTGTCGAGGAAAAGTTGC 60.548 47.826 0.00 0.00 0.00 4.17
4254 4492 0.384353 GTGTCGAGGAAAAGTTGCGC 60.384 55.000 0.00 0.00 0.00 6.09
4298 4536 7.441017 TCAATAACTTCCCATTTTCCAAGTTG 58.559 34.615 6.23 0.00 39.03 3.16
4300 4538 2.368548 ACTTCCCATTTTCCAAGTTGCC 59.631 45.455 0.00 0.00 0.00 4.52
4309 4547 0.469144 TCCAAGTTGCCTTTGGACCC 60.469 55.000 8.98 0.00 46.84 4.46
4362 4606 2.418884 GGAGGGATCCTGTTCTCGTTTC 60.419 54.545 12.58 0.00 31.76 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.082231 GTACAGACTACAGACCGCTCA 58.918 52.381 0.00 0.00 0.00 4.26
1 2 1.062294 CGTACAGACTACAGACCGCTC 59.938 57.143 0.00 0.00 0.00 5.03
2 3 1.085091 CGTACAGACTACAGACCGCT 58.915 55.000 0.00 0.00 0.00 5.52
3 4 1.062294 CTCGTACAGACTACAGACCGC 59.938 57.143 0.00 0.00 0.00 5.68
4 5 2.614779 TCTCGTACAGACTACAGACCG 58.385 52.381 0.00 0.00 0.00 4.79
5 6 4.034279 GTGATCTCGTACAGACTACAGACC 59.966 50.000 0.00 0.00 32.26 3.85
6 7 4.630505 TGTGATCTCGTACAGACTACAGAC 59.369 45.833 0.00 0.00 32.26 3.51
7 8 4.828829 TGTGATCTCGTACAGACTACAGA 58.171 43.478 0.00 0.00 32.26 3.41
8 9 5.447954 CCTTGTGATCTCGTACAGACTACAG 60.448 48.000 0.00 0.94 33.85 2.74
9 10 4.395231 CCTTGTGATCTCGTACAGACTACA 59.605 45.833 0.00 2.40 32.26 2.74
10 11 4.731193 GCCTTGTGATCTCGTACAGACTAC 60.731 50.000 0.00 0.05 32.26 2.73
11 12 3.377485 GCCTTGTGATCTCGTACAGACTA 59.623 47.826 0.00 0.00 32.26 2.59
12 13 2.164624 GCCTTGTGATCTCGTACAGACT 59.835 50.000 0.00 0.00 32.26 3.24
13 14 2.094700 TGCCTTGTGATCTCGTACAGAC 60.095 50.000 0.00 0.00 32.26 3.51
14 15 2.164422 CTGCCTTGTGATCTCGTACAGA 59.836 50.000 0.00 0.00 34.78 3.41
15 16 2.164422 TCTGCCTTGTGATCTCGTACAG 59.836 50.000 0.00 0.00 0.00 2.74
16 17 2.164422 CTCTGCCTTGTGATCTCGTACA 59.836 50.000 0.00 0.00 0.00 2.90
17 18 2.480416 CCTCTGCCTTGTGATCTCGTAC 60.480 54.545 0.00 0.00 0.00 3.67
18 19 1.751351 CCTCTGCCTTGTGATCTCGTA 59.249 52.381 0.00 0.00 0.00 3.43
19 20 0.534412 CCTCTGCCTTGTGATCTCGT 59.466 55.000 0.00 0.00 0.00 4.18
20 21 0.809241 GCCTCTGCCTTGTGATCTCG 60.809 60.000 0.00 0.00 0.00 4.04
21 22 0.251354 TGCCTCTGCCTTGTGATCTC 59.749 55.000 0.00 0.00 36.33 2.75
22 23 0.035630 GTGCCTCTGCCTTGTGATCT 60.036 55.000 0.00 0.00 36.33 2.75
23 24 0.321919 TGTGCCTCTGCCTTGTGATC 60.322 55.000 0.00 0.00 36.33 2.92
24 25 0.111061 TTGTGCCTCTGCCTTGTGAT 59.889 50.000 0.00 0.00 36.33 3.06
25 26 0.106769 TTTGTGCCTCTGCCTTGTGA 60.107 50.000 0.00 0.00 36.33 3.58
26 27 0.746063 TTTTGTGCCTCTGCCTTGTG 59.254 50.000 0.00 0.00 36.33 3.33
27 28 1.342174 CATTTTGTGCCTCTGCCTTGT 59.658 47.619 0.00 0.00 36.33 3.16
28 29 1.342174 ACATTTTGTGCCTCTGCCTTG 59.658 47.619 0.00 0.00 36.33 3.61
29 30 1.708341 ACATTTTGTGCCTCTGCCTT 58.292 45.000 0.00 0.00 36.33 4.35
30 31 2.162681 GTACATTTTGTGCCTCTGCCT 58.837 47.619 0.00 0.00 36.33 4.75
31 32 2.162408 GAGTACATTTTGTGCCTCTGCC 59.838 50.000 0.00 0.00 33.24 4.85
32 33 2.162408 GGAGTACATTTTGTGCCTCTGC 59.838 50.000 0.00 0.00 33.24 4.26
33 34 3.679389 AGGAGTACATTTTGTGCCTCTG 58.321 45.455 0.00 0.00 33.24 3.35
34 35 4.286032 TGTAGGAGTACATTTTGTGCCTCT 59.714 41.667 0.00 3.06 34.02 3.69
35 36 4.575885 TGTAGGAGTACATTTTGTGCCTC 58.424 43.478 0.00 2.68 34.02 4.70
36 37 4.634012 TGTAGGAGTACATTTTGTGCCT 57.366 40.909 0.00 0.00 34.02 4.75
45 46 5.505324 GCGAGTACGAAATGTAGGAGTACAT 60.505 44.000 0.00 0.00 45.34 2.29
46 47 4.201851 GCGAGTACGAAATGTAGGAGTACA 60.202 45.833 0.00 0.00 41.67 2.90
47 48 4.034975 AGCGAGTACGAAATGTAGGAGTAC 59.965 45.833 0.00 0.00 42.66 2.73
48 49 4.194640 AGCGAGTACGAAATGTAGGAGTA 58.805 43.478 0.00 0.00 42.66 2.59
49 50 3.015327 AGCGAGTACGAAATGTAGGAGT 58.985 45.455 0.00 0.00 42.66 3.85
50 51 3.548415 GGAGCGAGTACGAAATGTAGGAG 60.548 52.174 0.00 0.00 42.66 3.69
51 52 2.357009 GGAGCGAGTACGAAATGTAGGA 59.643 50.000 0.00 0.00 42.66 2.94
52 53 2.728922 GGAGCGAGTACGAAATGTAGG 58.271 52.381 0.00 0.00 42.66 3.18
53 54 2.223203 ACGGAGCGAGTACGAAATGTAG 60.223 50.000 0.00 0.00 42.66 2.74
54 55 1.739466 ACGGAGCGAGTACGAAATGTA 59.261 47.619 0.00 0.00 42.66 2.29
55 56 0.524862 ACGGAGCGAGTACGAAATGT 59.475 50.000 0.00 0.00 42.66 2.71
56 57 1.582502 GAACGGAGCGAGTACGAAATG 59.417 52.381 0.00 0.00 42.66 2.32
57 58 1.468736 GGAACGGAGCGAGTACGAAAT 60.469 52.381 0.00 0.00 42.66 2.17
58 59 0.109597 GGAACGGAGCGAGTACGAAA 60.110 55.000 0.00 0.00 42.66 3.46
59 60 0.957395 AGGAACGGAGCGAGTACGAA 60.957 55.000 0.00 0.00 42.66 3.85
60 61 0.108186 TAGGAACGGAGCGAGTACGA 60.108 55.000 0.00 0.00 42.66 3.43
61 62 0.729116 TTAGGAACGGAGCGAGTACG 59.271 55.000 0.00 0.00 42.93 3.67
62 63 2.927553 TTTAGGAACGGAGCGAGTAC 57.072 50.000 0.00 0.00 0.00 2.73
63 64 3.947196 TGTATTTAGGAACGGAGCGAGTA 59.053 43.478 0.00 0.00 0.00 2.59
64 65 2.756760 TGTATTTAGGAACGGAGCGAGT 59.243 45.455 0.00 0.00 0.00 4.18
65 66 3.431922 TGTATTTAGGAACGGAGCGAG 57.568 47.619 0.00 0.00 0.00 5.03
66 67 3.194116 ACTTGTATTTAGGAACGGAGCGA 59.806 43.478 0.00 0.00 0.00 4.93
67 68 3.518590 ACTTGTATTTAGGAACGGAGCG 58.481 45.455 0.00 0.00 0.00 5.03
68 69 4.756502 AGACTTGTATTTAGGAACGGAGC 58.243 43.478 0.00 0.00 0.00 4.70
69 70 7.172703 ACAAAAGACTTGTATTTAGGAACGGAG 59.827 37.037 0.00 0.00 0.00 4.63
70 71 6.993902 ACAAAAGACTTGTATTTAGGAACGGA 59.006 34.615 0.00 0.00 0.00 4.69
71 72 7.198306 ACAAAAGACTTGTATTTAGGAACGG 57.802 36.000 0.00 0.00 0.00 4.44
72 73 9.199982 TCTACAAAAGACTTGTATTTAGGAACG 57.800 33.333 0.00 0.00 34.75 3.95
79 80 9.793259 TGGAATCTCTACAAAAGACTTGTATTT 57.207 29.630 0.00 0.00 34.75 1.40
80 81 9.220767 GTGGAATCTCTACAAAAGACTTGTATT 57.779 33.333 0.00 0.00 34.75 1.89
81 82 8.598041 AGTGGAATCTCTACAAAAGACTTGTAT 58.402 33.333 0.00 0.00 34.75 2.29
82 83 7.963532 AGTGGAATCTCTACAAAAGACTTGTA 58.036 34.615 0.00 0.00 34.11 2.41
83 84 6.831976 AGTGGAATCTCTACAAAAGACTTGT 58.168 36.000 0.00 0.00 36.49 3.16
84 85 8.877779 CATAGTGGAATCTCTACAAAAGACTTG 58.122 37.037 0.00 0.00 29.47 3.16
85 86 8.816894 TCATAGTGGAATCTCTACAAAAGACTT 58.183 33.333 0.00 0.00 29.47 3.01
86 87 8.367660 TCATAGTGGAATCTCTACAAAAGACT 57.632 34.615 0.00 0.00 29.47 3.24
87 88 8.874816 GTTCATAGTGGAATCTCTACAAAAGAC 58.125 37.037 0.00 0.00 29.47 3.01
88 89 8.816894 AGTTCATAGTGGAATCTCTACAAAAGA 58.183 33.333 0.00 0.00 29.47 2.52
90 91 9.871238 GTAGTTCATAGTGGAATCTCTACAAAA 57.129 33.333 0.00 0.00 30.38 2.44
91 92 9.031537 TGTAGTTCATAGTGGAATCTCTACAAA 57.968 33.333 0.00 0.00 34.07 2.83
92 93 8.467598 GTGTAGTTCATAGTGGAATCTCTACAA 58.532 37.037 0.00 0.00 36.49 2.41
93 94 7.614192 TGTGTAGTTCATAGTGGAATCTCTACA 59.386 37.037 0.00 0.00 34.35 2.74
94 95 7.916450 GTGTGTAGTTCATAGTGGAATCTCTAC 59.084 40.741 0.00 0.00 30.52 2.59
95 96 7.201705 CGTGTGTAGTTCATAGTGGAATCTCTA 60.202 40.741 0.00 0.00 0.00 2.43
96 97 6.404844 CGTGTGTAGTTCATAGTGGAATCTCT 60.405 42.308 0.00 0.00 0.00 3.10
97 98 5.744345 CGTGTGTAGTTCATAGTGGAATCTC 59.256 44.000 0.00 0.00 0.00 2.75
98 99 5.394224 CCGTGTGTAGTTCATAGTGGAATCT 60.394 44.000 0.00 0.00 0.00 2.40
99 100 4.804139 CCGTGTGTAGTTCATAGTGGAATC 59.196 45.833 0.00 0.00 0.00 2.52
100 101 4.464951 TCCGTGTGTAGTTCATAGTGGAAT 59.535 41.667 0.00 0.00 0.00 3.01
101 102 3.827876 TCCGTGTGTAGTTCATAGTGGAA 59.172 43.478 0.00 0.00 0.00 3.53
102 103 3.423749 TCCGTGTGTAGTTCATAGTGGA 58.576 45.455 0.00 0.00 0.00 4.02
103 104 3.770666 CTCCGTGTGTAGTTCATAGTGG 58.229 50.000 0.00 0.00 0.00 4.00
104 105 3.179830 GCTCCGTGTGTAGTTCATAGTG 58.820 50.000 0.00 0.00 0.00 2.74
105 106 2.823747 TGCTCCGTGTGTAGTTCATAGT 59.176 45.455 0.00 0.00 0.00 2.12
106 107 3.503827 TGCTCCGTGTGTAGTTCATAG 57.496 47.619 0.00 0.00 0.00 2.23
107 108 3.945981 TTGCTCCGTGTGTAGTTCATA 57.054 42.857 0.00 0.00 0.00 2.15
108 109 2.831685 TTGCTCCGTGTGTAGTTCAT 57.168 45.000 0.00 0.00 0.00 2.57
109 110 2.605837 TTTGCTCCGTGTGTAGTTCA 57.394 45.000 0.00 0.00 0.00 3.18
110 111 3.496884 TCATTTTGCTCCGTGTGTAGTTC 59.503 43.478 0.00 0.00 0.00 3.01
111 112 3.472652 TCATTTTGCTCCGTGTGTAGTT 58.527 40.909 0.00 0.00 0.00 2.24
112 113 3.067106 CTCATTTTGCTCCGTGTGTAGT 58.933 45.455 0.00 0.00 0.00 2.73
113 114 3.067106 ACTCATTTTGCTCCGTGTGTAG 58.933 45.455 0.00 0.00 0.00 2.74
114 115 2.805671 CACTCATTTTGCTCCGTGTGTA 59.194 45.455 0.00 0.00 0.00 2.90
115 116 1.603802 CACTCATTTTGCTCCGTGTGT 59.396 47.619 0.00 0.00 0.00 3.72
116 117 1.872952 TCACTCATTTTGCTCCGTGTG 59.127 47.619 0.00 0.00 0.00 3.82
117 118 2.254546 TCACTCATTTTGCTCCGTGT 57.745 45.000 0.00 0.00 0.00 4.49
118 119 3.438087 AGATTCACTCATTTTGCTCCGTG 59.562 43.478 0.00 0.00 0.00 4.94
119 120 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
120 121 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
121 122 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
122 123 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
133 134 8.333908 CAGATGCATTTTAGAGTGTAGATTCAC 58.666 37.037 0.00 0.00 38.46 3.18
134 135 8.043113 ACAGATGCATTTTAGAGTGTAGATTCA 58.957 33.333 0.00 0.00 0.00 2.57
135 136 8.430801 ACAGATGCATTTTAGAGTGTAGATTC 57.569 34.615 0.00 0.00 0.00 2.52
138 139 9.967346 GTATACAGATGCATTTTAGAGTGTAGA 57.033 33.333 0.00 0.00 0.00 2.59
139 140 8.906693 CGTATACAGATGCATTTTAGAGTGTAG 58.093 37.037 0.00 0.00 0.00 2.74
140 141 8.410912 ACGTATACAGATGCATTTTAGAGTGTA 58.589 33.333 0.00 1.67 0.00 2.90
141 142 7.265673 ACGTATACAGATGCATTTTAGAGTGT 58.734 34.615 0.00 0.00 0.00 3.55
142 143 7.096023 GGACGTATACAGATGCATTTTAGAGTG 60.096 40.741 0.00 0.00 0.00 3.51
143 144 6.924060 GGACGTATACAGATGCATTTTAGAGT 59.076 38.462 0.00 0.00 0.00 3.24
144 145 6.088217 CGGACGTATACAGATGCATTTTAGAG 59.912 42.308 0.00 0.00 0.00 2.43
145 146 5.918576 CGGACGTATACAGATGCATTTTAGA 59.081 40.000 0.00 0.00 0.00 2.10
146 147 5.690409 ACGGACGTATACAGATGCATTTTAG 59.310 40.000 0.00 0.00 0.00 1.85
147 148 5.593968 ACGGACGTATACAGATGCATTTTA 58.406 37.500 0.00 0.00 0.00 1.52
148 149 4.439057 ACGGACGTATACAGATGCATTTT 58.561 39.130 0.00 0.00 0.00 1.82
149 150 4.054780 ACGGACGTATACAGATGCATTT 57.945 40.909 0.00 0.00 0.00 2.32
150 151 3.728076 ACGGACGTATACAGATGCATT 57.272 42.857 0.00 0.00 0.00 3.56
151 152 4.217767 ACATACGGACGTATACAGATGCAT 59.782 41.667 15.98 0.00 39.07 3.96
152 153 3.566742 ACATACGGACGTATACAGATGCA 59.433 43.478 15.98 0.00 39.07 3.96
153 154 3.912563 CACATACGGACGTATACAGATGC 59.087 47.826 15.98 0.00 39.07 3.91
154 155 4.023450 ACCACATACGGACGTATACAGATG 60.023 45.833 15.98 8.85 39.07 2.90
155 156 4.139786 ACCACATACGGACGTATACAGAT 58.860 43.478 15.98 0.72 39.07 2.90
156 157 3.544684 ACCACATACGGACGTATACAGA 58.455 45.455 15.98 0.00 39.07 3.41
157 158 3.976793 ACCACATACGGACGTATACAG 57.023 47.619 15.98 10.24 39.07 2.74
158 159 3.693578 TGAACCACATACGGACGTATACA 59.306 43.478 15.98 7.96 39.07 2.29
159 160 4.291540 TGAACCACATACGGACGTATAC 57.708 45.455 15.98 0.00 39.07 1.47
160 161 5.764686 ACTATGAACCACATACGGACGTATA 59.235 40.000 15.98 1.02 39.07 1.47
161 162 4.581824 ACTATGAACCACATACGGACGTAT 59.418 41.667 11.25 11.25 41.49 3.06
162 163 3.947196 ACTATGAACCACATACGGACGTA 59.053 43.478 7.05 7.05 40.07 3.57
163 164 2.756760 ACTATGAACCACATACGGACGT 59.243 45.455 1.98 1.98 40.07 4.34
164 165 3.113322 CACTATGAACCACATACGGACG 58.887 50.000 0.00 0.00 40.07 4.79
165 166 4.097437 TCTCACTATGAACCACATACGGAC 59.903 45.833 0.00 0.00 40.07 4.79
166 167 4.274978 TCTCACTATGAACCACATACGGA 58.725 43.478 0.00 0.00 40.07 4.69
167 168 4.649088 TCTCACTATGAACCACATACGG 57.351 45.455 0.00 0.00 40.07 4.02
168 169 6.016693 AGAGATCTCACTATGAACCACATACG 60.017 42.308 24.39 0.00 40.07 3.06
169 170 7.144661 CAGAGATCTCACTATGAACCACATAC 58.855 42.308 24.39 0.00 40.07 2.39
170 171 6.239148 GCAGAGATCTCACTATGAACCACATA 60.239 42.308 24.39 0.00 40.07 2.29
171 172 5.453057 GCAGAGATCTCACTATGAACCACAT 60.453 44.000 24.39 0.00 42.39 3.21
172 173 4.142071 GCAGAGATCTCACTATGAACCACA 60.142 45.833 24.39 0.00 31.75 4.17
173 174 4.142071 TGCAGAGATCTCACTATGAACCAC 60.142 45.833 24.39 2.17 31.75 4.16
174 175 4.026052 TGCAGAGATCTCACTATGAACCA 58.974 43.478 24.39 5.20 31.75 3.67
175 176 4.662468 TGCAGAGATCTCACTATGAACC 57.338 45.455 24.39 2.82 31.75 3.62
176 177 6.255453 GTCTTTGCAGAGATCTCACTATGAAC 59.745 42.308 24.39 10.89 31.75 3.18
177 178 6.154192 AGTCTTTGCAGAGATCTCACTATGAA 59.846 38.462 24.39 5.90 31.75 2.57
178 179 5.655974 AGTCTTTGCAGAGATCTCACTATGA 59.344 40.000 24.39 15.59 31.75 2.15
179 180 5.904941 AGTCTTTGCAGAGATCTCACTATG 58.095 41.667 24.39 14.43 33.03 2.23
180 181 6.070881 ACAAGTCTTTGCAGAGATCTCACTAT 60.071 38.462 24.39 0.57 37.85 2.12
181 182 5.244851 ACAAGTCTTTGCAGAGATCTCACTA 59.755 40.000 24.39 10.21 37.85 2.74
182 183 4.040217 ACAAGTCTTTGCAGAGATCTCACT 59.960 41.667 24.39 13.70 37.85 3.41
183 184 4.314121 ACAAGTCTTTGCAGAGATCTCAC 58.686 43.478 24.39 15.91 37.85 3.51
184 185 4.613925 ACAAGTCTTTGCAGAGATCTCA 57.386 40.909 24.39 1.70 37.85 3.27
185 186 7.608308 AAATACAAGTCTTTGCAGAGATCTC 57.392 36.000 15.29 15.29 37.85 2.75
186 187 7.768120 CCTAAATACAAGTCTTTGCAGAGATCT 59.232 37.037 10.53 6.85 37.85 2.75
187 188 7.766278 TCCTAAATACAAGTCTTTGCAGAGATC 59.234 37.037 10.53 4.68 37.85 2.75
188 189 7.624549 TCCTAAATACAAGTCTTTGCAGAGAT 58.375 34.615 10.53 0.00 37.85 2.75
189 190 7.004555 TCCTAAATACAAGTCTTTGCAGAGA 57.995 36.000 2.15 2.15 37.85 3.10
190 191 7.522374 GTTCCTAAATACAAGTCTTTGCAGAG 58.478 38.462 0.00 0.00 37.85 3.35
191 192 6.147164 CGTTCCTAAATACAAGTCTTTGCAGA 59.853 38.462 0.00 0.00 37.85 4.26
192 193 6.307155 CGTTCCTAAATACAAGTCTTTGCAG 58.693 40.000 0.00 0.00 37.85 4.41
193 194 5.180492 CCGTTCCTAAATACAAGTCTTTGCA 59.820 40.000 0.00 0.00 37.85 4.08
194 195 5.410439 TCCGTTCCTAAATACAAGTCTTTGC 59.590 40.000 0.00 0.00 37.85 3.68
195 196 6.092259 CCTCCGTTCCTAAATACAAGTCTTTG 59.908 42.308 0.00 0.00 40.24 2.77
196 197 6.013984 TCCTCCGTTCCTAAATACAAGTCTTT 60.014 38.462 0.00 0.00 0.00 2.52
197 198 5.482878 TCCTCCGTTCCTAAATACAAGTCTT 59.517 40.000 0.00 0.00 0.00 3.01
198 199 5.021458 TCCTCCGTTCCTAAATACAAGTCT 58.979 41.667 0.00 0.00 0.00 3.24
199 200 5.334724 TCCTCCGTTCCTAAATACAAGTC 57.665 43.478 0.00 0.00 0.00 3.01
200 201 4.161754 CCTCCTCCGTTCCTAAATACAAGT 59.838 45.833 0.00 0.00 0.00 3.16
201 202 4.443034 CCCTCCTCCGTTCCTAAATACAAG 60.443 50.000 0.00 0.00 0.00 3.16
202 203 3.453353 CCCTCCTCCGTTCCTAAATACAA 59.547 47.826 0.00 0.00 0.00 2.41
203 204 3.036091 CCCTCCTCCGTTCCTAAATACA 58.964 50.000 0.00 0.00 0.00 2.29
204 205 3.303049 TCCCTCCTCCGTTCCTAAATAC 58.697 50.000 0.00 0.00 0.00 1.89
205 206 3.052338 ACTCCCTCCTCCGTTCCTAAATA 60.052 47.826 0.00 0.00 0.00 1.40
206 207 2.292984 ACTCCCTCCTCCGTTCCTAAAT 60.293 50.000 0.00 0.00 0.00 1.40
207 208 1.078324 ACTCCCTCCTCCGTTCCTAAA 59.922 52.381 0.00 0.00 0.00 1.85
208 209 0.708802 ACTCCCTCCTCCGTTCCTAA 59.291 55.000 0.00 0.00 0.00 2.69
209 210 1.493871 CTACTCCCTCCTCCGTTCCTA 59.506 57.143 0.00 0.00 0.00 2.94
210 211 0.259356 CTACTCCCTCCTCCGTTCCT 59.741 60.000 0.00 0.00 0.00 3.36
211 212 0.033306 ACTACTCCCTCCTCCGTTCC 60.033 60.000 0.00 0.00 0.00 3.62
212 213 1.477295 CAACTACTCCCTCCTCCGTTC 59.523 57.143 0.00 0.00 0.00 3.95
213 214 1.076677 TCAACTACTCCCTCCTCCGTT 59.923 52.381 0.00 0.00 0.00 4.44
214 215 0.702902 TCAACTACTCCCTCCTCCGT 59.297 55.000 0.00 0.00 0.00 4.69
215 216 1.104630 GTCAACTACTCCCTCCTCCG 58.895 60.000 0.00 0.00 0.00 4.63
216 217 2.233305 TGTCAACTACTCCCTCCTCC 57.767 55.000 0.00 0.00 0.00 4.30
217 218 2.159028 GCATGTCAACTACTCCCTCCTC 60.159 54.545 0.00 0.00 0.00 3.71
218 219 1.834263 GCATGTCAACTACTCCCTCCT 59.166 52.381 0.00 0.00 0.00 3.69
219 220 1.834263 AGCATGTCAACTACTCCCTCC 59.166 52.381 0.00 0.00 0.00 4.30
220 221 3.055819 TCAAGCATGTCAACTACTCCCTC 60.056 47.826 0.00 0.00 0.00 4.30
221 222 2.906389 TCAAGCATGTCAACTACTCCCT 59.094 45.455 0.00 0.00 0.00 4.20
222 223 3.003480 GTCAAGCATGTCAACTACTCCC 58.997 50.000 0.00 0.00 0.00 4.30
223 224 3.003480 GGTCAAGCATGTCAACTACTCC 58.997 50.000 0.00 0.00 0.00 3.85
224 225 3.664107 TGGTCAAGCATGTCAACTACTC 58.336 45.455 0.00 0.00 0.00 2.59
225 226 3.769739 TGGTCAAGCATGTCAACTACT 57.230 42.857 0.00 0.00 0.00 2.57
226 227 4.829064 TTTGGTCAAGCATGTCAACTAC 57.171 40.909 0.00 0.00 0.00 2.73
265 266 1.913762 AGTTAGCCTCGGTGCAGGT 60.914 57.895 0.00 0.00 35.72 4.00
266 267 1.448540 CAGTTAGCCTCGGTGCAGG 60.449 63.158 0.00 0.00 36.50 4.85
267 268 1.448540 CCAGTTAGCCTCGGTGCAG 60.449 63.158 0.00 0.00 0.00 4.41
268 269 2.214216 ACCAGTTAGCCTCGGTGCA 61.214 57.895 0.11 0.00 0.00 4.57
269 270 1.741770 CACCAGTTAGCCTCGGTGC 60.742 63.158 0.00 0.00 42.24 5.01
271 272 2.291043 CCCACCAGTTAGCCTCGGT 61.291 63.158 0.00 0.00 0.00 4.69
272 273 2.584608 CCCACCAGTTAGCCTCGG 59.415 66.667 0.00 0.00 0.00 4.63
274 275 1.377333 GTGCCCACCAGTTAGCCTC 60.377 63.158 0.00 0.00 0.00 4.70
276 277 1.000896 ATGTGCCCACCAGTTAGCC 60.001 57.895 0.00 0.00 0.00 3.93
278 279 2.425143 ATCATGTGCCCACCAGTTAG 57.575 50.000 0.00 0.00 0.00 2.34
279 280 2.308570 AGAATCATGTGCCCACCAGTTA 59.691 45.455 0.00 0.00 0.00 2.24
280 281 1.076024 AGAATCATGTGCCCACCAGTT 59.924 47.619 0.00 0.00 0.00 3.16
281 282 0.700564 AGAATCATGTGCCCACCAGT 59.299 50.000 0.00 0.00 0.00 4.00
282 283 1.747355 GAAGAATCATGTGCCCACCAG 59.253 52.381 0.00 0.00 0.00 4.00
283 284 1.355381 AGAAGAATCATGTGCCCACCA 59.645 47.619 0.00 0.00 0.00 4.17
285 286 1.133790 GCAGAAGAATCATGTGCCCAC 59.866 52.381 0.00 0.00 0.00 4.61
286 287 1.466856 GCAGAAGAATCATGTGCCCA 58.533 50.000 0.00 0.00 0.00 5.36
287 288 0.743097 GGCAGAAGAATCATGTGCCC 59.257 55.000 14.66 0.00 46.72 5.36
289 290 1.133790 GTGGGCAGAAGAATCATGTGC 59.866 52.381 0.00 0.00 0.00 4.57
299 312 1.151450 AGGGTTGTGTGGGCAGAAG 59.849 57.895 0.00 0.00 0.00 2.85
329 342 1.578423 GCTTCAGTGGCTGTTGAGC 59.422 57.895 0.00 0.00 45.40 4.26
332 345 2.253452 GCGCTTCAGTGGCTGTTG 59.747 61.111 0.00 0.00 32.61 3.33
353 384 2.811317 GACTTCCTCCGTGCTGCG 60.811 66.667 0.00 0.00 40.95 5.18
355 386 2.811317 GCGACTTCCTCCGTGCTG 60.811 66.667 0.00 0.00 0.00 4.41
361 392 2.388347 GCATCTTGCGACTTCCTCC 58.612 57.895 0.00 0.00 31.71 4.30
371 402 1.756375 CTCTGTACGCCGCATCTTGC 61.756 60.000 0.00 0.00 40.69 4.01
380 411 4.162690 CCTGCCCCTCTGTACGCC 62.163 72.222 0.00 0.00 0.00 5.68
403 441 4.457496 TACGCTGCTCTGCCCTGC 62.457 66.667 0.00 0.00 0.00 4.85
404 442 2.510238 GTACGCTGCTCTGCCCTG 60.510 66.667 0.00 0.00 0.00 4.45
405 443 3.775654 GGTACGCTGCTCTGCCCT 61.776 66.667 0.00 0.00 0.00 5.19
429 467 1.376037 CTTCCCCTGACGCCTTGAC 60.376 63.158 0.00 0.00 0.00 3.18
508 546 1.592743 CTGCTCTGCTCTGCTCTGT 59.407 57.895 0.00 0.00 0.00 3.41
511 549 2.101835 GTGCTGCTCTGCTCTGCTC 61.102 63.158 0.00 0.00 0.00 4.26
512 550 2.047083 GTGCTGCTCTGCTCTGCT 60.047 61.111 0.00 0.00 0.00 4.24
513 551 3.126225 GGTGCTGCTCTGCTCTGC 61.126 66.667 0.00 0.00 0.00 4.26
514 552 2.436292 GGGTGCTGCTCTGCTCTG 60.436 66.667 0.00 0.00 0.00 3.35
515 553 2.926779 TGGGTGCTGCTCTGCTCT 60.927 61.111 0.00 0.00 0.00 4.09
516 554 2.436292 CTGGGTGCTGCTCTGCTC 60.436 66.667 0.00 0.00 0.00 4.26
517 555 3.247648 ACTGGGTGCTGCTCTGCT 61.248 61.111 0.00 0.00 0.00 4.24
518 556 2.745492 GACTGGGTGCTGCTCTGC 60.745 66.667 0.00 0.00 0.00 4.26
519 557 1.375652 CTGACTGGGTGCTGCTCTG 60.376 63.158 0.00 0.00 0.00 3.35
546 584 1.344114 GCTGGATTTTTCTTGGTGGCA 59.656 47.619 0.00 0.00 0.00 4.92
554 595 5.504665 CGCAGATTTATCGCTGGATTTTTCT 60.505 40.000 0.00 0.00 34.00 2.52
558 599 2.031682 GCGCAGATTTATCGCTGGATTT 60.032 45.455 0.30 0.00 44.79 2.17
559 600 1.532868 GCGCAGATTTATCGCTGGATT 59.467 47.619 0.30 0.00 44.79 3.01
562 603 1.202568 CGCGCAGATTTATCGCTGG 59.797 57.895 8.75 0.00 45.87 4.85
569 610 2.081725 TGGTAACACGCGCAGATTTA 57.918 45.000 5.73 0.00 46.17 1.40
583 624 1.900981 TCCGTCCGTCCGTTGGTAA 60.901 57.895 0.00 0.00 0.00 2.85
584 625 2.282110 TCCGTCCGTCCGTTGGTA 60.282 61.111 0.00 0.00 0.00 3.25
585 626 3.982241 GTCCGTCCGTCCGTTGGT 61.982 66.667 0.00 0.00 0.00 3.67
586 627 1.865788 TTAGTCCGTCCGTCCGTTGG 61.866 60.000 0.00 0.00 0.00 3.77
588 629 1.581447 GTTAGTCCGTCCGTCCGTT 59.419 57.895 0.00 0.00 0.00 4.44
589 630 2.335712 GGTTAGTCCGTCCGTCCGT 61.336 63.158 0.00 0.00 0.00 4.69
590 631 2.486966 GGTTAGTCCGTCCGTCCG 59.513 66.667 0.00 0.00 0.00 4.79
619 660 3.041940 GACGACACCAAGCCCGTG 61.042 66.667 0.00 0.00 35.22 4.94
651 692 2.904131 CGAGGAAGAAGCCCCCTC 59.096 66.667 0.00 0.00 42.24 4.30
652 693 3.403558 GCGAGGAAGAAGCCCCCT 61.404 66.667 0.00 0.00 0.00 4.79
842 883 1.745489 GGCGTCCACCCATTCACTC 60.745 63.158 0.00 0.00 0.00 3.51
843 884 2.351276 GGCGTCCACCCATTCACT 59.649 61.111 0.00 0.00 0.00 3.41
844 885 3.124921 CGGCGTCCACCCATTCAC 61.125 66.667 0.00 0.00 0.00 3.18
845 886 4.402528 CCGGCGTCCACCCATTCA 62.403 66.667 6.01 0.00 0.00 2.57
874 939 2.217510 ATATATCCGCCTCGACCACT 57.782 50.000 0.00 0.00 0.00 4.00
947 1018 1.772182 CTCGCTCAGTCGTTCTGTTT 58.228 50.000 9.34 0.00 43.97 2.83
1176 1264 4.578928 GTCTAAAAGAACTCACCTTTGGCA 59.421 41.667 0.00 0.00 34.42 4.92
1181 1269 5.104485 ACACAGGTCTAAAAGAACTCACCTT 60.104 40.000 0.00 0.00 37.92 3.50
1197 1285 0.252103 TCACCTCCCCTACACAGGTC 60.252 60.000 0.00 0.00 38.57 3.85
1198 1286 0.252284 CTCACCTCCCCTACACAGGT 60.252 60.000 0.00 0.00 41.52 4.00
1203 1291 0.614979 GAGCACTCACCTCCCCTACA 60.615 60.000 0.00 0.00 0.00 2.74
1204 1292 0.614979 TGAGCACTCACCTCCCCTAC 60.615 60.000 0.00 0.00 34.14 3.18
1205 1293 0.339859 ATGAGCACTCACCTCCCCTA 59.660 55.000 1.71 0.00 43.11 3.53
1214 1302 1.377202 GCCCCGAAATGAGCACTCA 60.377 57.895 2.25 2.25 44.59 3.41
1243 1331 1.549170 ACGAACTAACATCGGAGCCTT 59.451 47.619 0.00 0.00 44.32 4.35
1288 1389 2.369394 CCCTCAAGCAACCTATGAACC 58.631 52.381 0.00 0.00 0.00 3.62
1342 1444 6.155221 TCAGCACCTAATTCAGTAGAGATGTT 59.845 38.462 0.00 0.00 0.00 2.71
1389 1495 0.109086 CTGATCCGAGTTCGCACTGT 60.109 55.000 0.00 0.00 38.18 3.55
1457 1569 3.643595 CTTGGCATCGCTGGGGGAA 62.644 63.158 0.00 0.00 0.00 3.97
1460 1572 3.944250 AACCTTGGCATCGCTGGGG 62.944 63.158 0.00 0.00 0.00 4.96
1529 1647 4.040461 TGCCTTATCCACCTTATGCTAGAC 59.960 45.833 0.00 0.00 0.00 2.59
1573 1692 4.165180 TGTGTACTACCATGCCCAATATGT 59.835 41.667 0.00 0.00 0.00 2.29
1580 1704 1.553248 TGACTGTGTACTACCATGCCC 59.447 52.381 0.00 0.00 0.00 5.36
1628 1752 7.786464 ACCTGAATGGGCTAGAATATTGATTTT 59.214 33.333 0.00 0.00 41.11 1.82
1632 1756 5.912149 ACCTGAATGGGCTAGAATATTGA 57.088 39.130 0.00 0.00 41.11 2.57
1798 1943 1.880027 CCCCTTTTGGTTCTTCAGACG 59.120 52.381 0.00 0.00 38.10 4.18
1843 1988 2.978824 GCTCGCTCCCTTGGTACA 59.021 61.111 0.00 0.00 0.00 2.90
1844 1989 2.202756 CGCTCGCTCCCTTGGTAC 60.203 66.667 0.00 0.00 0.00 3.34
1857 2002 0.368227 CTCACAATGTTCGAGCGCTC 59.632 55.000 27.64 27.64 0.00 5.03
1858 2003 1.016130 CCTCACAATGTTCGAGCGCT 61.016 55.000 11.27 11.27 0.00 5.92
1859 2004 1.421485 CCTCACAATGTTCGAGCGC 59.579 57.895 0.00 0.00 0.00 5.92
1860 2005 1.016130 AGCCTCACAATGTTCGAGCG 61.016 55.000 0.00 0.00 0.00 5.03
1861 2006 0.723981 GAGCCTCACAATGTTCGAGC 59.276 55.000 0.00 0.00 0.00 5.03
1865 2024 3.300009 CAAAACGAGCCTCACAATGTTC 58.700 45.455 0.00 0.00 0.00 3.18
1869 2028 1.609208 AGCAAAACGAGCCTCACAAT 58.391 45.000 0.00 0.00 0.00 2.71
1920 2079 5.129485 TGGAGCTAATACTTTCTTCCTCCTG 59.871 44.000 0.00 0.00 38.67 3.86
1925 2088 6.879400 TCTTCTGGAGCTAATACTTTCTTCC 58.121 40.000 0.00 0.00 0.00 3.46
1947 2110 2.299326 AGGCAAGCCAAACATCTTCT 57.701 45.000 14.40 0.00 38.92 2.85
1956 2119 0.251297 ACAGCACATAGGCAAGCCAA 60.251 50.000 14.40 0.00 38.92 4.52
2015 2178 0.810648 TGTCCGCAGCAAATCCATTC 59.189 50.000 0.00 0.00 0.00 2.67
2018 2181 0.322366 TCATGTCCGCAGCAAATCCA 60.322 50.000 0.00 0.00 0.00 3.41
2060 2223 2.493278 ACCACAATTTCTGCATACAGCC 59.507 45.455 0.00 0.00 44.10 4.85
2140 2303 2.159627 GCATGGGAAACAGTAAGACGTG 59.840 50.000 0.00 0.00 0.00 4.49
2367 2538 5.263599 TGACATGAGTATGGCCAGATTTTT 58.736 37.500 13.05 0.00 41.94 1.94
2368 2539 4.858850 TGACATGAGTATGGCCAGATTTT 58.141 39.130 13.05 0.00 41.94 1.82
2369 2540 4.458397 CTGACATGAGTATGGCCAGATTT 58.542 43.478 13.05 0.00 41.94 2.17
2370 2541 3.181447 CCTGACATGAGTATGGCCAGATT 60.181 47.826 13.05 2.16 41.94 2.40
2455 2626 9.167311 GACATGTAAAGAGTCAATGAGGTTATT 57.833 33.333 0.00 0.00 32.68 1.40
2456 2627 8.321353 TGACATGTAAAGAGTCAATGAGGTTAT 58.679 33.333 0.00 0.00 39.15 1.89
2457 2628 7.602644 GTGACATGTAAAGAGTCAATGAGGTTA 59.397 37.037 0.00 0.00 43.16 2.85
2458 2629 6.428159 GTGACATGTAAAGAGTCAATGAGGTT 59.572 38.462 0.00 0.00 43.16 3.50
2459 2630 5.934625 GTGACATGTAAAGAGTCAATGAGGT 59.065 40.000 0.00 0.00 43.16 3.85
2460 2631 6.169094 AGTGACATGTAAAGAGTCAATGAGG 58.831 40.000 0.00 0.00 43.16 3.86
2530 2712 8.225107 CACAAGTAGCGCTAAAGTAAAACATTA 58.775 33.333 20.73 0.00 0.00 1.90
2548 2753 6.159293 TCTACAAGCTTGATGACACAAGTAG 58.841 40.000 32.50 17.88 45.98 2.57
2582 2787 7.037730 ACCCCAAATGGTTGAAATATCATTCAA 60.038 33.333 0.00 0.00 44.68 2.69
2606 2812 1.071699 ACCACACATGTCACCTACACC 59.928 52.381 0.00 0.00 42.09 4.16
2607 2813 2.143122 CACCACACATGTCACCTACAC 58.857 52.381 0.00 0.00 42.09 2.90
2609 2815 1.808411 CCACCACACATGTCACCTAC 58.192 55.000 0.00 0.00 0.00 3.18
2610 2816 0.036164 GCCACCACACATGTCACCTA 59.964 55.000 0.00 0.00 0.00 3.08
2722 2928 8.650143 AAATGTAGGACACCAAATCACTAAAT 57.350 30.769 0.00 0.00 0.00 1.40
2739 2945 9.401058 AGAATTACTGGATTCTGAAAATGTAGG 57.599 33.333 7.47 0.00 43.02 3.18
2854 3061 2.089201 GGGTGCTTTTGGCTATTACGT 58.911 47.619 0.00 0.00 42.39 3.57
2857 3064 2.099405 GCTGGGTGCTTTTGGCTATTA 58.901 47.619 0.00 0.00 42.39 0.98
2880 3098 2.157738 GGCTGACTTGACTGAAATGCT 58.842 47.619 0.00 0.00 0.00 3.79
2904 3122 6.098679 TGTCCATTTGTTGTTTGAAACAGAG 58.901 36.000 10.91 0.00 43.27 3.35
2905 3123 6.030548 TGTCCATTTGTTGTTTGAAACAGA 57.969 33.333 10.91 0.64 43.27 3.41
2908 3126 9.701355 CTTTTATGTCCATTTGTTGTTTGAAAC 57.299 29.630 0.14 0.14 0.00 2.78
2926 3144 9.492973 AAAATGTATGCAGAAAAGCTTTTATGT 57.507 25.926 34.57 23.90 40.46 2.29
2943 3161 8.649841 CATGTAAACAGGCAAAGAAAATGTATG 58.350 33.333 0.00 0.00 0.00 2.39
2958 3177 5.447279 GGCTTGTAATCGACATGTAAACAGG 60.447 44.000 0.00 1.15 38.07 4.00
3027 3246 2.644555 CTTCCCACGGCCTACATCGG 62.645 65.000 0.00 0.00 0.00 4.18
3052 3271 1.617018 TTCCGAGACAGATGGGGCAG 61.617 60.000 0.00 0.00 0.00 4.85
3058 3277 1.519455 GCCGGTTCCGAGACAGATG 60.519 63.158 13.08 0.00 0.00 2.90
3061 3280 4.052229 ACGCCGGTTCCGAGACAG 62.052 66.667 13.08 0.00 0.00 3.51
3439 3663 6.980978 AGTGTACGGATTTATGAGACATTGAG 59.019 38.462 0.00 0.00 0.00 3.02
3443 3667 6.873997 TGAAGTGTACGGATTTATGAGACAT 58.126 36.000 0.00 0.00 0.00 3.06
3458 3682 5.050972 CGACCTGAAAAAGACTGAAGTGTAC 60.051 44.000 0.00 0.00 0.00 2.90
3469 3693 0.882927 CGGCCACGACCTGAAAAAGA 60.883 55.000 2.24 0.00 44.60 2.52
3470 3694 1.164041 ACGGCCACGACCTGAAAAAG 61.164 55.000 2.24 0.00 44.60 2.27
3494 3727 4.608170 TCTGAAGGCCAAATTAGGGAAT 57.392 40.909 5.01 0.00 0.00 3.01
3499 3732 2.423538 CGGGTTCTGAAGGCCAAATTAG 59.576 50.000 5.01 0.00 0.00 1.73
3506 3739 0.748367 GGATTCGGGTTCTGAAGGCC 60.748 60.000 0.00 0.00 0.00 5.19
3507 3740 0.748367 GGGATTCGGGTTCTGAAGGC 60.748 60.000 0.00 0.00 0.00 4.35
3508 3741 0.107165 GGGGATTCGGGTTCTGAAGG 60.107 60.000 0.00 0.00 0.00 3.46
3509 3742 0.912486 AGGGGATTCGGGTTCTGAAG 59.088 55.000 0.00 0.00 0.00 3.02
3510 3743 1.368374 AAGGGGATTCGGGTTCTGAA 58.632 50.000 0.00 0.00 0.00 3.02
3511 3744 1.368374 AAAGGGGATTCGGGTTCTGA 58.632 50.000 0.00 0.00 0.00 3.27
3512 3745 2.092323 GAAAAGGGGATTCGGGTTCTG 58.908 52.381 0.00 0.00 0.00 3.02
3513 3746 1.005569 GGAAAAGGGGATTCGGGTTCT 59.994 52.381 0.00 0.00 0.00 3.01
3514 3747 1.005569 AGGAAAAGGGGATTCGGGTTC 59.994 52.381 0.00 0.00 0.00 3.62
3515 3748 1.081481 AGGAAAAGGGGATTCGGGTT 58.919 50.000 0.00 0.00 0.00 4.11
3516 3749 1.005569 GAAGGAAAAGGGGATTCGGGT 59.994 52.381 0.00 0.00 0.00 5.28
3517 3750 1.005450 TGAAGGAAAAGGGGATTCGGG 59.995 52.381 0.00 0.00 0.00 5.14
3518 3751 2.369394 CTGAAGGAAAAGGGGATTCGG 58.631 52.381 0.00 0.00 0.00 4.30
3519 3752 2.290960 ACCTGAAGGAAAAGGGGATTCG 60.291 50.000 2.62 0.00 37.94 3.34
3520 3753 3.357203 GACCTGAAGGAAAAGGGGATTC 58.643 50.000 2.62 0.00 37.94 2.52
3521 3754 2.290960 CGACCTGAAGGAAAAGGGGATT 60.291 50.000 2.62 0.00 37.94 3.01
3522 3755 1.282157 CGACCTGAAGGAAAAGGGGAT 59.718 52.381 2.62 0.00 37.94 3.85
3523 3756 0.690762 CGACCTGAAGGAAAAGGGGA 59.309 55.000 2.62 0.00 37.94 4.81
3524 3757 0.400594 ACGACCTGAAGGAAAAGGGG 59.599 55.000 2.62 0.00 37.94 4.79
3525 3758 1.523758 CACGACCTGAAGGAAAAGGG 58.476 55.000 2.62 0.00 37.94 3.95
3526 3759 1.071699 TCCACGACCTGAAGGAAAAGG 59.928 52.381 2.62 0.27 39.65 3.11
3527 3760 2.543777 TCCACGACCTGAAGGAAAAG 57.456 50.000 2.62 0.00 38.94 2.27
3528 3761 3.146066 CATTCCACGACCTGAAGGAAAA 58.854 45.455 2.62 0.00 38.94 2.29
3529 3762 2.370519 TCATTCCACGACCTGAAGGAAA 59.629 45.455 2.62 0.00 38.94 3.13
3537 3770 2.550208 GGTTCACTTCATTCCACGACCT 60.550 50.000 0.00 0.00 0.00 3.85
3719 3957 3.885297 CGAAGGAACAAGATGGCCAATAT 59.115 43.478 10.96 0.00 0.00 1.28
3741 3979 3.849953 GACGGACGGCGTGCAATC 61.850 66.667 30.11 22.16 0.00 2.67
3761 3999 3.069872 TGGTTCAATGCATTTGTGAAGCT 59.930 39.130 28.44 0.50 45.50 3.74
3766 4004 1.722464 CGCTGGTTCAATGCATTTGTG 59.278 47.619 9.83 0.00 36.65 3.33
3784 4022 2.762745 TGTGTCTCTTTTCCTTACCGC 58.237 47.619 0.00 0.00 0.00 5.68
3818 4056 2.303022 ACGGTGGTGAAGTTCTCATCAT 59.697 45.455 4.17 0.00 46.89 2.45
3838 4076 9.138596 ACCTATATTTTCTAGTCTCCTCTTGAC 57.861 37.037 0.00 0.00 34.88 3.18
3854 4092 7.503902 GGCTTCTTCTGATTGGACCTATATTTT 59.496 37.037 0.00 0.00 0.00 1.82
3934 4172 5.806654 AGGCACAACCAATTTATCAAGTT 57.193 34.783 0.00 0.00 43.14 2.66
3960 4198 6.007703 TGAGTTTAGTCAACAATAAAGGGGG 58.992 40.000 0.00 0.00 37.93 5.40
3978 4216 2.146342 CTCGACTTGGCACATGAGTTT 58.854 47.619 0.00 0.00 39.30 2.66
4016 4254 4.474226 AACATTGTTTCTTCACGAGCTC 57.526 40.909 2.73 2.73 0.00 4.09
4022 4260 3.701241 TCCGCAAACATTGTTTCTTCAC 58.299 40.909 11.78 0.03 0.00 3.18
4086 4324 1.068610 TGGCGGAAAAGCAAAAGATCG 60.069 47.619 0.00 0.00 39.27 3.69
4108 4346 5.621197 TTCCACGTTGTATCTCCAAAATG 57.379 39.130 0.00 0.00 0.00 2.32
4109 4347 6.432783 TCATTTCCACGTTGTATCTCCAAAAT 59.567 34.615 0.00 0.00 0.00 1.82
4150 4388 4.004314 GGGAAAAGTAGACTTCAAGGAGC 58.996 47.826 0.00 0.00 34.61 4.70
4172 4410 1.962807 TGATGCAAGGTCTTTTGGGTG 59.037 47.619 0.00 0.00 0.00 4.61
4199 4437 4.083537 TGGTCATAACTTTCGATGCACAAC 60.084 41.667 0.00 0.00 0.00 3.32
4205 4443 5.572211 CCACAATGGTCATAACTTTCGATG 58.428 41.667 0.00 0.00 31.35 3.84
4252 4490 0.526524 AAGCTTCTCGGATTCTCGCG 60.527 55.000 0.00 0.00 0.00 5.87
4254 4492 3.254060 TGAAAAGCTTCTCGGATTCTCG 58.746 45.455 0.00 0.00 32.33 4.04
4298 4536 2.356667 CCTCCAGGGTCCAAAGGC 59.643 66.667 0.00 0.00 0.00 4.35
4309 4547 1.229336 AGGTCCTCCACACCTCCAG 60.229 63.158 0.00 0.00 40.54 3.86
4337 4581 0.688087 AGAACAGGATCCCTCCCGTC 60.688 60.000 8.55 0.00 43.21 4.79
4345 4589 3.320673 ACAGAAACGAGAACAGGATCC 57.679 47.619 2.48 2.48 0.00 3.36
4350 4594 5.047847 TGAACCTAACAGAAACGAGAACAG 58.952 41.667 0.00 0.00 0.00 3.16
4362 4606 3.131396 AGCAAGACGTTGAACCTAACAG 58.869 45.455 0.00 0.00 35.46 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.