Multiple sequence alignment - TraesCS2D01G056500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G056500 chr2D 100.000 3134 0 0 1 3134 22502109 22505242 0.000000e+00 5788.0
1 TraesCS2D01G056500 chr2D 84.476 496 62 7 1001 1481 68924070 68923575 2.830000e-130 475.0
2 TraesCS2D01G056500 chr2A 91.209 1604 103 19 871 2447 24300346 24301938 0.000000e+00 2146.0
3 TraesCS2D01G056500 chr2A 88.629 642 35 25 1 614 24299305 24299936 0.000000e+00 747.0
4 TraesCS2D01G056500 chr2A 84.921 504 61 6 1001 1489 65822210 65821707 2.170000e-136 496.0
5 TraesCS2D01G056500 chr2A 87.261 157 18 2 2456 2611 618954822 618954667 8.930000e-41 178.0
6 TraesCS2D01G056500 chr2A 80.864 162 28 3 1615 1773 65821203 65821042 1.180000e-24 124.0
7 TraesCS2D01G056500 chr2A 93.333 75 4 1 3024 3098 24306164 24306237 3.300000e-20 110.0
8 TraesCS2D01G056500 chr2A 92.000 50 2 2 3085 3134 78855431 78855384 5.610000e-08 69.4
9 TraesCS2D01G056500 chr2A 97.500 40 1 0 3095 3134 136969903 136969864 5.610000e-08 69.4
10 TraesCS2D01G056500 chr2B 92.313 1340 61 15 878 2185 39195232 39193903 0.000000e+00 1866.0
11 TraesCS2D01G056500 chr2B 84.921 504 61 7 1001 1489 101489343 101488840 2.170000e-136 496.0
12 TraesCS2D01G056500 chr2B 92.447 331 13 4 296 614 39195939 39195609 2.200000e-126 462.0
13 TraesCS2D01G056500 chr2B 84.184 392 36 18 336 721 39191432 39191061 1.070000e-94 357.0
14 TraesCS2D01G056500 chr2B 84.516 310 22 9 2663 2946 39196908 39197217 1.840000e-72 283.0
15 TraesCS2D01G056500 chr2B 86.928 153 16 2 2305 2453 39193803 39193651 5.380000e-38 169.0
16 TraesCS2D01G056500 chr2B 79.141 163 29 5 1615 1773 101488339 101488178 1.190000e-19 108.0
17 TraesCS2D01G056500 chr5D 88.189 381 21 8 2661 3017 539479220 539479600 1.730000e-117 433.0
18 TraesCS2D01G056500 chr5B 88.189 381 21 8 2661 3017 681132356 681132736 1.730000e-117 433.0
19 TraesCS2D01G056500 chr4A 87.402 381 24 8 2661 3017 628926441 628926061 1.740000e-112 416.0
20 TraesCS2D01G056500 chr4A 89.209 139 14 1 2497 2634 629398077 629398215 4.160000e-39 172.0
21 TraesCS2D01G056500 chr3B 88.636 176 15 4 2462 2634 476946622 476946795 3.170000e-50 209.0
22 TraesCS2D01G056500 chr3B 79.545 176 31 2 2462 2633 24818099 24817925 1.530000e-23 121.0
23 TraesCS2D01G056500 chr3A 86.528 193 17 3 2451 2635 733502068 733501877 1.470000e-48 204.0
24 TraesCS2D01G056500 chr3A 95.238 42 2 0 3093 3134 700815041 700815082 2.020000e-07 67.6
25 TraesCS2D01G056500 chr7B 88.485 165 17 2 2456 2619 118128086 118127923 6.860000e-47 198.0
26 TraesCS2D01G056500 chr7B 80.702 171 29 1 2467 2633 113801435 113801265 2.540000e-26 130.0
27 TraesCS2D01G056500 chrUn 87.879 165 18 2 2456 2619 23656642 23656805 3.190000e-45 193.0
28 TraesCS2D01G056500 chr6B 85.083 181 25 2 2456 2635 26523429 26523608 1.920000e-42 183.0
29 TraesCS2D01G056500 chr7A 84.783 184 25 3 2456 2637 109824932 109824750 6.900000e-42 182.0
30 TraesCS2D01G056500 chr4D 95.349 43 2 0 3092 3134 125073522 125073480 5.610000e-08 69.4
31 TraesCS2D01G056500 chr4D 97.436 39 1 0 3096 3134 309494639 309494677 2.020000e-07 67.6
32 TraesCS2D01G056500 chr4D 97.436 39 1 0 3096 3134 323113696 323113734 2.020000e-07 67.6
33 TraesCS2D01G056500 chr3D 95.349 43 1 1 3092 3134 169426214 169426255 2.020000e-07 67.6
34 TraesCS2D01G056500 chr5A 97.297 37 1 0 3098 3134 621835942 621835906 2.610000e-06 63.9
35 TraesCS2D01G056500 chr1D 91.489 47 3 1 3089 3134 360388399 360388353 2.610000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G056500 chr2D 22502109 22505242 3133 False 5788.0 5788 100.0000 1 3134 1 chr2D.!!$F1 3133
1 TraesCS2D01G056500 chr2A 24299305 24301938 2633 False 1446.5 2146 89.9190 1 2447 2 chr2A.!!$F2 2446
2 TraesCS2D01G056500 chr2A 65821042 65822210 1168 True 310.0 496 82.8925 1001 1773 2 chr2A.!!$R4 772
3 TraesCS2D01G056500 chr2B 39191061 39195939 4878 True 713.5 1866 88.9680 296 2453 4 chr2B.!!$R1 2157
4 TraesCS2D01G056500 chr2B 101488178 101489343 1165 True 302.0 496 82.0310 1001 1773 2 chr2B.!!$R2 772

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
455 487 0.030501 AAGATATGTGGACCGGGGGA 60.031 55.0 6.32 0.0 0.00 4.81 F
750 1007 0.317603 AATCGTCCGATAACCGCTCG 60.318 55.0 2.16 0.0 36.84 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1575 1883 0.316689 GTTTTGGAGACGGCAACACG 60.317 55.0 0.0 0.0 40.31 4.49 R
2522 3324 0.179045 CCACGCTAGAAATCAGGGGG 60.179 60.0 0.0 0.0 0.00 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 107 8.076178 GCAACAGTCAAATCAGTAAGTTTACAT 58.924 33.333 4.97 0.00 36.12 2.29
156 161 9.125026 GTCATCCATCCAGTAAATTAATCACTT 57.875 33.333 0.97 0.00 0.00 3.16
195 217 2.143122 CGGGTCACATATGCATGGTAC 58.857 52.381 10.16 6.86 36.39 3.34
196 218 2.143122 GGGTCACATATGCATGGTACG 58.857 52.381 10.16 0.00 36.39 3.67
197 219 2.484770 GGGTCACATATGCATGGTACGT 60.485 50.000 10.16 0.00 36.39 3.57
198 220 3.243941 GGGTCACATATGCATGGTACGTA 60.244 47.826 10.16 0.00 36.39 3.57
209 231 5.294356 TGCATGGTACGTAGATATCCAAAC 58.706 41.667 6.01 2.89 0.00 2.93
210 232 4.689345 GCATGGTACGTAGATATCCAAACC 59.311 45.833 6.01 1.67 0.00 3.27
211 233 4.572985 TGGTACGTAGATATCCAAACCG 57.427 45.455 0.00 0.00 0.00 4.44
212 234 3.318839 TGGTACGTAGATATCCAAACCGG 59.681 47.826 0.00 0.00 0.00 5.28
218 240 1.141053 AGATATCCAAACCGGCCTCAC 59.859 52.381 0.00 0.00 33.14 3.51
233 255 1.002366 CTCACATCTTTCGGCGAAGG 58.998 55.000 23.77 23.77 0.00 3.46
245 267 1.362406 GGCGAAGGAGAAAGAAGCCG 61.362 60.000 0.00 0.00 33.43 5.52
333 359 0.950836 CTGGTGAAACGCCATTGTCA 59.049 50.000 4.51 0.00 43.46 3.58
349 375 2.338809 TGTCAGAATCCCTTGAGGTGT 58.661 47.619 0.00 0.00 36.75 4.16
350 376 2.303022 TGTCAGAATCCCTTGAGGTGTC 59.697 50.000 0.00 0.00 36.75 3.67
351 377 1.550524 TCAGAATCCCTTGAGGTGTCG 59.449 52.381 0.00 0.00 36.75 4.35
352 378 1.550524 CAGAATCCCTTGAGGTGTCGA 59.449 52.381 0.00 0.00 36.75 4.20
382 412 1.694150 AGATATATGCGCCGGCCATAT 59.306 47.619 33.59 33.59 38.85 1.78
383 413 2.069273 GATATATGCGCCGGCCATATC 58.931 52.381 34.44 27.46 36.37 1.63
453 485 1.128200 TGAAGATATGTGGACCGGGG 58.872 55.000 6.32 0.00 0.00 5.73
454 486 0.396811 GAAGATATGTGGACCGGGGG 59.603 60.000 6.32 0.00 0.00 5.40
455 487 0.030501 AAGATATGTGGACCGGGGGA 60.031 55.000 6.32 0.00 0.00 4.81
456 488 0.030501 AGATATGTGGACCGGGGGAA 60.031 55.000 6.32 0.00 0.00 3.97
457 489 1.064825 GATATGTGGACCGGGGGAAT 58.935 55.000 6.32 0.00 0.00 3.01
591 634 2.842457 CGAAGATGCCATTCTCCATCA 58.158 47.619 0.00 0.00 40.15 3.07
615 688 0.859232 GTTCGGCAGCCACGTATATG 59.141 55.000 13.30 0.00 0.00 1.78
618 691 1.890489 TCGGCAGCCACGTATATGTAT 59.110 47.619 13.30 0.00 0.00 2.29
620 693 2.609491 CGGCAGCCACGTATATGTATGT 60.609 50.000 13.30 0.00 0.00 2.29
624 697 4.796290 GCAGCCACGTATATGTATGTGACT 60.796 45.833 20.03 12.85 46.27 3.41
625 698 4.681483 CAGCCACGTATATGTATGTGACTG 59.319 45.833 18.76 18.76 45.47 3.51
633 706 7.279313 ACGTATATGTATGTGACTGTTTTTCCC 59.721 37.037 0.00 0.00 0.00 3.97
634 707 7.279090 CGTATATGTATGTGACTGTTTTTCCCA 59.721 37.037 0.00 0.00 0.00 4.37
644 901 5.048782 TGACTGTTTTTCCCATGAGAAATCG 60.049 40.000 2.98 0.00 35.74 3.34
646 903 3.056891 TGTTTTTCCCATGAGAAATCGCC 60.057 43.478 2.98 0.00 35.74 5.54
650 907 4.437682 TTCCCATGAGAAATCGCCTTAT 57.562 40.909 0.00 0.00 0.00 1.73
655 912 3.793797 TGAGAAATCGCCTTATCGACA 57.206 42.857 0.00 0.00 41.62 4.35
656 913 4.118093 TGAGAAATCGCCTTATCGACAA 57.882 40.909 0.00 0.00 41.62 3.18
716 973 8.255206 ACTTTTGGTAAATTTTATCCGGATTCC 58.745 33.333 24.71 12.20 0.00 3.01
748 1005 2.304751 AAAATCGTCCGATAACCGCT 57.695 45.000 2.16 0.00 36.84 5.52
749 1006 1.849097 AAATCGTCCGATAACCGCTC 58.151 50.000 2.16 0.00 36.84 5.03
750 1007 0.317603 AATCGTCCGATAACCGCTCG 60.318 55.000 2.16 0.00 36.84 5.03
762 1019 2.758497 CCGCTCGGTATTTTTCGGT 58.242 52.632 0.00 0.00 32.93 4.69
763 1020 1.081094 CCGCTCGGTATTTTTCGGTT 58.919 50.000 0.00 0.00 32.93 4.44
764 1021 2.270047 CCGCTCGGTATTTTTCGGTTA 58.730 47.619 0.00 0.00 32.93 2.85
765 1022 2.029606 CCGCTCGGTATTTTTCGGTTAC 59.970 50.000 0.00 0.00 32.93 2.50
766 1023 2.029606 CGCTCGGTATTTTTCGGTTACC 59.970 50.000 0.00 0.00 33.50 2.85
767 1024 3.002102 GCTCGGTATTTTTCGGTTACCA 58.998 45.455 1.13 0.00 36.05 3.25
768 1025 3.181517 GCTCGGTATTTTTCGGTTACCAC 60.182 47.826 1.13 0.00 36.05 4.16
769 1026 2.992543 TCGGTATTTTTCGGTTACCACG 59.007 45.455 1.13 0.00 36.05 4.94
770 1027 2.094099 CGGTATTTTTCGGTTACCACGG 59.906 50.000 1.13 0.00 36.05 4.94
772 1029 4.249661 GGTATTTTTCGGTTACCACGGTA 58.750 43.478 1.13 0.00 36.27 4.02
790 1047 2.104281 GGTAACCGAATATCTGGGTGCT 59.896 50.000 0.52 0.00 33.47 4.40
795 1052 3.244215 ACCGAATATCTGGGTGCTACATG 60.244 47.826 0.00 0.00 31.52 3.21
796 1053 3.006859 CCGAATATCTGGGTGCTACATGA 59.993 47.826 0.00 0.00 0.00 3.07
799 1056 5.337089 CGAATATCTGGGTGCTACATGAGAT 60.337 44.000 0.00 0.00 0.00 2.75
824 1085 7.601705 TTTTTCTCATCTGGAATCCAAAACT 57.398 32.000 2.61 0.00 30.80 2.66
830 1091 4.829064 TCTGGAATCCAAAACTTTGACG 57.171 40.909 2.61 0.00 40.55 4.35
835 1096 7.662258 TCTGGAATCCAAAACTTTGACGTTATA 59.338 33.333 2.61 0.00 40.55 0.98
842 1103 5.813080 AAACTTTGACGTTATATGCCTCC 57.187 39.130 0.00 0.00 0.00 4.30
843 1104 4.481368 ACTTTGACGTTATATGCCTCCA 57.519 40.909 0.00 0.00 0.00 3.86
845 1106 5.437060 ACTTTGACGTTATATGCCTCCAAT 58.563 37.500 0.00 0.00 0.00 3.16
846 1107 5.527582 ACTTTGACGTTATATGCCTCCAATC 59.472 40.000 0.00 0.00 0.00 2.67
847 1108 4.681074 TGACGTTATATGCCTCCAATCA 57.319 40.909 0.00 0.00 0.00 2.57
848 1109 5.227569 TGACGTTATATGCCTCCAATCAT 57.772 39.130 0.00 0.00 0.00 2.45
849 1110 6.353404 TGACGTTATATGCCTCCAATCATA 57.647 37.500 0.00 0.00 0.00 2.15
850 1111 6.163476 TGACGTTATATGCCTCCAATCATAC 58.837 40.000 0.00 0.00 0.00 2.39
851 1112 6.109156 ACGTTATATGCCTCCAATCATACA 57.891 37.500 0.00 0.00 0.00 2.29
852 1113 6.166279 ACGTTATATGCCTCCAATCATACAG 58.834 40.000 0.00 0.00 0.00 2.74
854 1115 6.476378 GTTATATGCCTCCAATCATACAGGT 58.524 40.000 0.00 0.00 0.00 4.00
855 1116 2.715749 TGCCTCCAATCATACAGGTG 57.284 50.000 0.00 0.00 0.00 4.00
856 1117 1.915489 TGCCTCCAATCATACAGGTGT 59.085 47.619 0.00 0.00 0.00 4.16
857 1118 2.092968 TGCCTCCAATCATACAGGTGTC 60.093 50.000 0.00 0.00 0.00 3.67
858 1119 2.826428 CCTCCAATCATACAGGTGTCG 58.174 52.381 0.00 0.00 0.00 4.35
859 1120 2.430694 CCTCCAATCATACAGGTGTCGA 59.569 50.000 0.00 0.00 0.00 4.20
860 1121 3.448686 CTCCAATCATACAGGTGTCGAC 58.551 50.000 9.11 9.11 0.00 4.20
861 1122 2.159296 TCCAATCATACAGGTGTCGACG 60.159 50.000 11.62 0.00 0.00 5.12
862 1123 2.193447 CAATCATACAGGTGTCGACGG 58.807 52.381 11.62 2.96 0.00 4.79
863 1124 1.758936 ATCATACAGGTGTCGACGGA 58.241 50.000 11.62 0.00 0.00 4.69
864 1125 0.806868 TCATACAGGTGTCGACGGAC 59.193 55.000 11.62 4.14 43.71 4.79
865 1126 0.522705 CATACAGGTGTCGACGGACG 60.523 60.000 11.62 2.15 46.49 4.79
866 1127 0.674581 ATACAGGTGTCGACGGACGA 60.675 55.000 11.62 0.00 46.49 4.20
899 1160 4.322349 CCGGAATATTTTGTTTCCAAGCCA 60.322 41.667 0.00 0.00 41.25 4.75
940 1215 1.810151 GCGCCTCCTATCTCTCTACAG 59.190 57.143 0.00 0.00 0.00 2.74
945 1220 5.569832 CGCCTCCTATCTCTCTACAGATACA 60.570 48.000 0.00 0.00 34.75 2.29
958 1233 8.228206 TCTCTACAGATACATTACATTCCTCCT 58.772 37.037 0.00 0.00 0.00 3.69
980 1258 3.370104 TCCCAGCTTGAAAGAAAACCAA 58.630 40.909 0.00 0.00 0.00 3.67
992 1270 3.490348 AGAAAACCAACATCACCAGAGG 58.510 45.455 0.00 0.00 0.00 3.69
999 1277 3.213506 CAACATCACCAGAGGTTCAACA 58.786 45.455 0.00 0.00 44.73 3.33
1014 1298 1.898094 AACAATGGCGCACAGAGCA 60.898 52.632 10.83 0.00 46.13 4.26
1266 1550 4.508128 ATGTTCGGCGGCGATCGT 62.508 61.111 35.04 29.88 41.72 3.73
1404 1700 2.904131 GGCCTGCTCTACCTCACC 59.096 66.667 0.00 0.00 0.00 4.02
1773 2528 2.046988 CGTGCAGTCTCCATGCCA 60.047 61.111 0.00 0.00 43.18 4.92
1774 2529 1.450848 CGTGCAGTCTCCATGCCAT 60.451 57.895 0.00 0.00 43.18 4.40
1786 2541 1.213678 CCATGCCATCTTCTCCAAGGA 59.786 52.381 0.00 0.00 0.00 3.36
1833 2588 0.811281 CTTCTCCAAAATCACCCGGC 59.189 55.000 0.00 0.00 0.00 6.13
1998 2759 1.445410 CATGCCGTCGTCTCCGAAA 60.445 57.895 0.00 0.00 46.26 3.46
2167 2936 6.317088 ACATGTTGAATGAATAACAAGAGCG 58.683 36.000 0.00 0.00 39.89 5.03
2174 2943 1.060698 GAATAACAAGAGCGTGTCGGC 59.939 52.381 0.00 0.00 0.00 5.54
2249 3018 9.156940 AGGTAGTCATGATCTAGTACTACACTA 57.843 37.037 20.00 1.00 42.68 2.74
2267 3036 4.997395 ACACTAGTGATAGTTTGTTGGCTG 59.003 41.667 29.30 0.00 0.00 4.85
2272 3041 4.997395 AGTGATAGTTTGTTGGCTGTACTG 59.003 41.667 0.00 0.00 0.00 2.74
2283 3052 5.186992 TGTTGGCTGTACTGCTAGATAAGAA 59.813 40.000 22.05 0.00 0.00 2.52
2288 3057 5.233263 GCTGTACTGCTAGATAAGAACAAGC 59.767 44.000 16.69 0.00 0.00 4.01
2291 3060 4.177026 ACTGCTAGATAAGAACAAGCGTG 58.823 43.478 0.00 0.00 35.95 5.34
2316 3114 4.124851 TGAGGTACTAAAAGCTAGCAGC 57.875 45.455 18.83 3.64 41.55 5.25
2333 3131 5.160607 AGCAGCTGTTTTAGTGGTGTATA 57.839 39.130 16.64 0.00 0.00 1.47
2362 3164 5.414454 TCGGTTGTAAAAGCAATAAGAGCAT 59.586 36.000 0.00 0.00 0.00 3.79
2404 3206 3.063526 TGAGCTGCCTCAGTGGAC 58.936 61.111 0.00 0.00 42.98 4.02
2424 3226 4.619227 CGGTTGTGGCGGTGGTCT 62.619 66.667 0.00 0.00 0.00 3.85
2425 3227 2.668550 GGTTGTGGCGGTGGTCTC 60.669 66.667 0.00 0.00 0.00 3.36
2447 3249 1.132500 CTTCGGCTAGGAAGGGGATT 58.868 55.000 0.00 0.00 39.76 3.01
2448 3250 2.326428 CTTCGGCTAGGAAGGGGATTA 58.674 52.381 0.00 0.00 39.76 1.75
2449 3251 2.715763 TCGGCTAGGAAGGGGATTAT 57.284 50.000 0.00 0.00 0.00 1.28
2450 3252 2.986050 TCGGCTAGGAAGGGGATTATT 58.014 47.619 0.00 0.00 0.00 1.40
2451 3253 3.323775 TCGGCTAGGAAGGGGATTATTT 58.676 45.455 0.00 0.00 0.00 1.40
2452 3254 3.326880 TCGGCTAGGAAGGGGATTATTTC 59.673 47.826 0.00 0.00 0.00 2.17
2453 3255 3.328050 CGGCTAGGAAGGGGATTATTTCT 59.672 47.826 0.00 0.00 0.00 2.52
2454 3256 4.657013 GGCTAGGAAGGGGATTATTTCTG 58.343 47.826 0.00 0.00 0.00 3.02
2455 3257 4.351111 GGCTAGGAAGGGGATTATTTCTGA 59.649 45.833 0.00 0.00 0.00 3.27
2456 3258 5.163088 GGCTAGGAAGGGGATTATTTCTGAA 60.163 44.000 0.00 0.00 0.00 3.02
2457 3259 6.365520 GCTAGGAAGGGGATTATTTCTGAAA 58.634 40.000 5.15 5.15 0.00 2.69
2458 3260 7.007116 GCTAGGAAGGGGATTATTTCTGAAAT 58.993 38.462 18.64 18.64 34.90 2.17
2459 3261 7.507277 GCTAGGAAGGGGATTATTTCTGAAATT 59.493 37.037 19.68 4.10 32.38 1.82
2460 3262 9.426534 CTAGGAAGGGGATTATTTCTGAAATTT 57.573 33.333 19.68 9.03 32.38 1.82
2461 3263 8.311395 AGGAAGGGGATTATTTCTGAAATTTC 57.689 34.615 19.68 11.41 32.38 2.17
2462 3264 8.125081 AGGAAGGGGATTATTTCTGAAATTTCT 58.875 33.333 19.68 6.28 32.38 2.52
2463 3265 9.421399 GGAAGGGGATTATTTCTGAAATTTCTA 57.579 33.333 19.68 4.88 32.38 2.10
2465 3267 9.768215 AAGGGGATTATTTCTGAAATTTCTACA 57.232 29.630 19.68 0.00 32.38 2.74
2466 3268 9.190317 AGGGGATTATTTCTGAAATTTCTACAC 57.810 33.333 19.68 7.96 32.38 2.90
2467 3269 8.414003 GGGGATTATTTCTGAAATTTCTACACC 58.586 37.037 19.68 13.39 32.38 4.16
2468 3270 9.190317 GGGATTATTTCTGAAATTTCTACACCT 57.810 33.333 19.68 3.06 32.38 4.00
2472 3274 9.932207 TTATTTCTGAAATTTCTACACCTACGA 57.068 29.630 19.68 0.00 32.38 3.43
2473 3275 8.842358 ATTTCTGAAATTTCTACACCTACGAA 57.158 30.769 18.64 5.46 0.00 3.85
2474 3276 7.647907 TTCTGAAATTTCTACACCTACGAAC 57.352 36.000 18.64 0.00 0.00 3.95
2475 3277 6.751157 TCTGAAATTTCTACACCTACGAACA 58.249 36.000 18.64 0.00 0.00 3.18
2476 3278 6.866770 TCTGAAATTTCTACACCTACGAACAG 59.133 38.462 18.64 3.97 0.00 3.16
2477 3279 5.407387 TGAAATTTCTACACCTACGAACAGC 59.593 40.000 18.64 0.00 0.00 4.40
2478 3280 4.803098 ATTTCTACACCTACGAACAGCT 57.197 40.909 0.00 0.00 0.00 4.24
2479 3281 3.570926 TTCTACACCTACGAACAGCTG 57.429 47.619 13.48 13.48 0.00 4.24
2480 3282 2.511659 TCTACACCTACGAACAGCTGT 58.488 47.619 15.25 15.25 0.00 4.40
2481 3283 2.889045 TCTACACCTACGAACAGCTGTT 59.111 45.455 31.57 31.57 41.64 3.16
2482 3284 4.074259 TCTACACCTACGAACAGCTGTTA 58.926 43.478 31.20 15.70 38.56 2.41
2483 3285 3.022607 ACACCTACGAACAGCTGTTAC 57.977 47.619 31.20 21.78 38.56 2.50
2484 3286 1.983605 CACCTACGAACAGCTGTTACG 59.016 52.381 31.20 31.39 38.56 3.18
2485 3287 1.610522 ACCTACGAACAGCTGTTACGT 59.389 47.619 35.93 35.93 41.18 3.57
2486 3288 2.813754 ACCTACGAACAGCTGTTACGTA 59.186 45.455 34.99 34.99 39.97 3.57
2487 3289 3.253188 ACCTACGAACAGCTGTTACGTAA 59.747 43.478 35.66 27.25 40.15 3.18
2488 3290 3.605486 CCTACGAACAGCTGTTACGTAAC 59.395 47.826 35.66 27.65 40.15 2.50
2489 3291 2.397549 ACGAACAGCTGTTACGTAACC 58.602 47.619 34.63 21.64 38.74 2.85
2490 3292 2.035066 ACGAACAGCTGTTACGTAACCT 59.965 45.455 34.63 20.16 38.74 3.50
2491 3293 3.253188 ACGAACAGCTGTTACGTAACCTA 59.747 43.478 34.63 15.43 38.74 3.08
2492 3294 3.605486 CGAACAGCTGTTACGTAACCTAC 59.395 47.826 31.20 20.63 38.56 3.18
2493 3295 3.605486 GAACAGCTGTTACGTAACCTACG 59.395 47.826 31.20 19.99 46.96 3.51
2507 3309 7.921629 CGTAACCTACGTAATTTGCTAAAAC 57.078 36.000 0.00 0.00 46.41 2.43
2508 3310 6.674090 CGTAACCTACGTAATTTGCTAAAACG 59.326 38.462 14.31 14.31 46.41 3.60
2509 3311 4.961511 ACCTACGTAATTTGCTAAAACGC 58.038 39.130 15.33 0.00 0.00 4.84
2510 3312 4.692155 ACCTACGTAATTTGCTAAAACGCT 59.308 37.500 15.33 8.31 0.00 5.07
2511 3313 5.868801 ACCTACGTAATTTGCTAAAACGCTA 59.131 36.000 15.33 8.80 0.00 4.26
2512 3314 6.368516 ACCTACGTAATTTGCTAAAACGCTAA 59.631 34.615 15.33 4.97 0.00 3.09
2513 3315 7.064966 ACCTACGTAATTTGCTAAAACGCTAAT 59.935 33.333 15.33 3.48 37.03 1.73
2514 3316 7.581600 CCTACGTAATTTGCTAAAACGCTAATC 59.418 37.037 15.33 0.00 34.99 1.75
2515 3317 6.833839 ACGTAATTTGCTAAAACGCTAATCA 58.166 32.000 15.33 0.00 34.99 2.57
2516 3318 7.299586 ACGTAATTTGCTAAAACGCTAATCAA 58.700 30.769 15.33 0.00 34.99 2.57
2517 3319 7.804129 ACGTAATTTGCTAAAACGCTAATCAAA 59.196 29.630 15.33 0.00 34.99 2.69
2518 3320 8.093723 CGTAATTTGCTAAAACGCTAATCAAAC 58.906 33.333 6.30 0.00 34.99 2.93
2519 3321 6.944557 ATTTGCTAAAACGCTAATCAAACC 57.055 33.333 0.00 0.00 31.41 3.27
2520 3322 4.073169 TGCTAAAACGCTAATCAAACCG 57.927 40.909 0.00 0.00 0.00 4.44
2521 3323 2.844223 GCTAAAACGCTAATCAAACCGC 59.156 45.455 0.00 0.00 0.00 5.68
2522 3324 2.341318 AAAACGCTAATCAAACCGCC 57.659 45.000 0.00 0.00 0.00 6.13
2523 3325 0.524414 AAACGCTAATCAAACCGCCC 59.476 50.000 0.00 0.00 0.00 6.13
2524 3326 1.310216 AACGCTAATCAAACCGCCCC 61.310 55.000 0.00 0.00 0.00 5.80
2525 3327 2.478033 CGCTAATCAAACCGCCCCC 61.478 63.158 0.00 0.00 0.00 5.40
2540 3342 3.386543 CCCCCTGATTTCTAGCGTG 57.613 57.895 0.00 0.00 0.00 5.34
2541 3343 0.179045 CCCCCTGATTTCTAGCGTGG 60.179 60.000 0.00 0.00 0.00 4.94
2542 3344 0.179045 CCCCTGATTTCTAGCGTGGG 60.179 60.000 0.00 0.00 0.00 4.61
2543 3345 0.815615 CCCTGATTTCTAGCGTGGGC 60.816 60.000 0.00 0.00 40.37 5.36
2544 3346 0.815615 CCTGATTTCTAGCGTGGGCC 60.816 60.000 0.00 0.00 41.24 5.80
2545 3347 0.815615 CTGATTTCTAGCGTGGGCCC 60.816 60.000 17.59 17.59 41.24 5.80
2546 3348 1.887707 GATTTCTAGCGTGGGCCCG 60.888 63.158 19.37 7.25 41.24 6.13
2547 3349 2.588856 GATTTCTAGCGTGGGCCCGT 62.589 60.000 19.37 3.89 41.24 5.28
2548 3350 2.869503 ATTTCTAGCGTGGGCCCGTG 62.870 60.000 19.37 13.54 41.24 4.94
2560 3362 2.437716 CCCGTGCGCCCAACTAAT 60.438 61.111 4.18 0.00 0.00 1.73
2561 3363 2.760159 CCCGTGCGCCCAACTAATG 61.760 63.158 4.18 0.00 0.00 1.90
2562 3364 1.743623 CCGTGCGCCCAACTAATGA 60.744 57.895 4.18 0.00 0.00 2.57
2563 3365 1.423845 CGTGCGCCCAACTAATGAC 59.576 57.895 4.18 0.00 0.00 3.06
2564 3366 1.423845 GTGCGCCCAACTAATGACG 59.576 57.895 4.18 0.00 0.00 4.35
2565 3367 1.017177 GTGCGCCCAACTAATGACGA 61.017 55.000 4.18 0.00 32.26 4.20
2566 3368 0.320858 TGCGCCCAACTAATGACGAA 60.321 50.000 4.18 0.00 32.26 3.85
2567 3369 1.014352 GCGCCCAACTAATGACGAAT 58.986 50.000 0.00 0.00 32.26 3.34
2568 3370 1.400494 GCGCCCAACTAATGACGAATT 59.600 47.619 0.00 0.00 32.26 2.17
2569 3371 2.610374 GCGCCCAACTAATGACGAATTA 59.390 45.455 0.00 0.00 32.26 1.40
2570 3372 3.064271 GCGCCCAACTAATGACGAATTAA 59.936 43.478 0.00 0.00 32.26 1.40
2571 3373 4.437659 GCGCCCAACTAATGACGAATTAAA 60.438 41.667 0.00 0.00 32.26 1.52
2572 3374 5.263185 CGCCCAACTAATGACGAATTAAAG 58.737 41.667 0.00 0.00 32.26 1.85
2573 3375 5.064198 CGCCCAACTAATGACGAATTAAAGA 59.936 40.000 0.00 0.00 32.26 2.52
2574 3376 6.255950 GCCCAACTAATGACGAATTAAAGAC 58.744 40.000 0.00 0.00 30.24 3.01
2575 3377 6.093633 GCCCAACTAATGACGAATTAAAGACT 59.906 38.462 0.00 0.00 30.24 3.24
2576 3378 7.464358 CCCAACTAATGACGAATTAAAGACTG 58.536 38.462 0.00 0.00 30.24 3.51
2577 3379 6.961554 CCAACTAATGACGAATTAAAGACTGC 59.038 38.462 0.00 0.00 30.24 4.40
2578 3380 6.663944 ACTAATGACGAATTAAAGACTGCC 57.336 37.500 0.00 0.00 30.24 4.85
2579 3381 6.170506 ACTAATGACGAATTAAAGACTGCCA 58.829 36.000 0.00 0.00 30.24 4.92
2580 3382 5.957842 AATGACGAATTAAAGACTGCCAA 57.042 34.783 0.00 0.00 0.00 4.52
2581 3383 5.957842 ATGACGAATTAAAGACTGCCAAA 57.042 34.783 0.00 0.00 0.00 3.28
2582 3384 5.957842 TGACGAATTAAAGACTGCCAAAT 57.042 34.783 0.00 0.00 0.00 2.32
2583 3385 5.938322 TGACGAATTAAAGACTGCCAAATC 58.062 37.500 0.00 0.00 0.00 2.17
2584 3386 5.471797 TGACGAATTAAAGACTGCCAAATCA 59.528 36.000 0.00 0.00 0.00 2.57
2585 3387 5.942872 ACGAATTAAAGACTGCCAAATCAG 58.057 37.500 0.00 0.00 39.86 2.90
2586 3388 4.795278 CGAATTAAAGACTGCCAAATCAGC 59.205 41.667 0.00 0.00 37.59 4.26
2587 3389 5.619757 CGAATTAAAGACTGCCAAATCAGCA 60.620 40.000 0.00 0.00 37.59 4.41
2588 3390 5.726980 ATTAAAGACTGCCAAATCAGCAA 57.273 34.783 0.00 0.00 40.35 3.91
2589 3391 5.726980 TTAAAGACTGCCAAATCAGCAAT 57.273 34.783 0.00 0.00 40.35 3.56
2590 3392 4.612264 AAAGACTGCCAAATCAGCAATT 57.388 36.364 0.00 0.00 40.35 2.32
2591 3393 5.726980 AAAGACTGCCAAATCAGCAATTA 57.273 34.783 0.00 0.00 40.35 1.40
2592 3394 4.708726 AGACTGCCAAATCAGCAATTAC 57.291 40.909 0.00 0.00 40.35 1.89
2593 3395 3.127548 AGACTGCCAAATCAGCAATTACG 59.872 43.478 0.00 0.00 40.35 3.18
2594 3396 2.819608 ACTGCCAAATCAGCAATTACGT 59.180 40.909 0.00 0.00 40.35 3.57
2595 3397 4.006989 ACTGCCAAATCAGCAATTACGTA 58.993 39.130 0.00 0.00 40.35 3.57
2596 3398 4.457603 ACTGCCAAATCAGCAATTACGTAA 59.542 37.500 11.02 11.02 40.35 3.18
2597 3399 5.048364 ACTGCCAAATCAGCAATTACGTAAA 60.048 36.000 12.81 0.00 40.35 2.01
2598 3400 5.398169 TGCCAAATCAGCAATTACGTAAAG 58.602 37.500 12.81 9.26 37.28 1.85
2599 3401 5.048364 TGCCAAATCAGCAATTACGTAAAGT 60.048 36.000 12.81 0.27 37.28 2.66
2600 3402 6.149640 TGCCAAATCAGCAATTACGTAAAGTA 59.850 34.615 12.81 0.00 37.28 2.24
2601 3403 6.468000 GCCAAATCAGCAATTACGTAAAGTAC 59.532 38.462 12.81 2.70 34.56 2.73
2616 3418 5.904080 CGTAAAGTACGTAAGAATCCCTACG 59.096 44.000 0.00 9.94 46.41 3.51
2618 3420 7.254319 CGTAAAGTACGTAAGAATCCCTACGTA 60.254 40.741 16.47 16.47 45.65 3.57
2622 3424 5.686159 ACGTAAGAATCCCTACGTAGATG 57.314 43.478 24.15 14.06 45.65 2.90
2623 3425 4.023365 ACGTAAGAATCCCTACGTAGATGC 60.023 45.833 24.15 9.28 45.65 3.91
2624 3426 4.023450 CGTAAGAATCCCTACGTAGATGCA 60.023 45.833 24.15 4.80 43.02 3.96
2625 3427 4.592485 AAGAATCCCTACGTAGATGCAG 57.408 45.455 24.15 6.49 0.00 4.41
2626 3428 2.297597 AGAATCCCTACGTAGATGCAGC 59.702 50.000 24.15 8.41 0.00 5.25
2627 3429 1.704641 ATCCCTACGTAGATGCAGCA 58.295 50.000 24.15 0.00 0.00 4.41
2628 3430 1.704641 TCCCTACGTAGATGCAGCAT 58.295 50.000 24.15 7.91 0.00 3.79
2629 3431 2.039418 TCCCTACGTAGATGCAGCATT 58.961 47.619 24.15 2.42 0.00 3.56
2630 3432 3.227614 TCCCTACGTAGATGCAGCATTA 58.772 45.455 24.15 1.43 0.00 1.90
2631 3433 3.005472 TCCCTACGTAGATGCAGCATTAC 59.995 47.826 24.15 12.31 0.00 1.89
2632 3434 3.005897 CCCTACGTAGATGCAGCATTACT 59.994 47.826 24.15 5.56 0.00 2.24
2633 3435 4.230657 CCTACGTAGATGCAGCATTACTC 58.769 47.826 24.15 0.00 0.00 2.59
2634 3436 2.732366 ACGTAGATGCAGCATTACTCG 58.268 47.619 9.90 13.97 0.00 4.18
2635 3437 2.357952 ACGTAGATGCAGCATTACTCGA 59.642 45.455 21.17 2.33 0.00 4.04
2636 3438 3.004839 ACGTAGATGCAGCATTACTCGAT 59.995 43.478 21.17 9.47 0.00 3.59
2653 3455 2.093658 TCGATTAGTTCCTTGGTGCTCC 60.094 50.000 0.00 0.00 0.00 4.70
2656 3458 2.024176 TAGTTCCTTGGTGCTCCTCA 57.976 50.000 6.34 0.00 34.23 3.86
2658 3460 0.951040 GTTCCTTGGTGCTCCTCACG 60.951 60.000 6.34 0.00 46.56 4.35
2664 3466 4.357947 GTGCTCCTCACGGCGTGA 62.358 66.667 36.84 36.84 40.50 4.35
2666 3468 4.057428 GCTCCTCACGGCGTGACT 62.057 66.667 36.29 0.00 37.67 3.41
2667 3469 2.126307 CTCCTCACGGCGTGACTG 60.126 66.667 36.29 28.32 37.67 3.51
2669 3471 2.142357 CTCCTCACGGCGTGACTGAA 62.142 60.000 36.29 20.41 37.67 3.02
2670 3472 1.734477 CCTCACGGCGTGACTGAAG 60.734 63.158 36.29 25.53 37.67 3.02
2671 3473 1.734477 CTCACGGCGTGACTGAAGG 60.734 63.158 36.29 22.43 37.67 3.46
2673 3475 2.915659 ACGGCGTGACTGAAGGGA 60.916 61.111 13.76 0.00 0.00 4.20
2674 3476 2.342279 CGGCGTGACTGAAGGGAA 59.658 61.111 0.00 0.00 0.00 3.97
2675 3477 1.301401 CGGCGTGACTGAAGGGAAA 60.301 57.895 0.00 0.00 0.00 3.13
2678 3480 1.860078 CGTGACTGAAGGGAAACGC 59.140 57.895 0.00 0.00 0.00 4.84
2679 3481 0.600255 CGTGACTGAAGGGAAACGCT 60.600 55.000 0.00 0.00 0.00 5.07
2680 3482 0.868406 GTGACTGAAGGGAAACGCTG 59.132 55.000 0.00 0.00 0.00 5.18
2682 3484 0.250338 GACTGAAGGGAAACGCTGGT 60.250 55.000 0.00 0.00 0.00 4.00
2683 3485 0.182775 ACTGAAGGGAAACGCTGGTT 59.817 50.000 0.00 0.00 38.22 3.67
2694 3496 3.698029 AACGCTGGTTTCATATGATGC 57.302 42.857 6.17 2.50 30.42 3.91
2695 3497 1.949525 ACGCTGGTTTCATATGATGCC 59.050 47.619 6.17 11.97 0.00 4.40
2696 3498 1.948834 CGCTGGTTTCATATGATGCCA 59.051 47.619 20.70 20.70 0.00 4.92
2697 3499 2.287188 CGCTGGTTTCATATGATGCCAC 60.287 50.000 19.06 15.54 0.00 5.01
2698 3500 2.689471 GCTGGTTTCATATGATGCCACA 59.311 45.455 19.06 9.20 0.00 4.17
2699 3501 3.243301 GCTGGTTTCATATGATGCCACAG 60.243 47.826 19.06 16.46 0.00 3.66
2700 3502 4.201657 CTGGTTTCATATGATGCCACAGA 58.798 43.478 19.06 4.89 0.00 3.41
2702 3504 4.641541 TGGTTTCATATGATGCCACAGAAG 59.358 41.667 19.06 0.00 0.00 2.85
2703 3505 4.641989 GGTTTCATATGATGCCACAGAAGT 59.358 41.667 6.17 0.00 0.00 3.01
2704 3506 5.822519 GGTTTCATATGATGCCACAGAAGTA 59.177 40.000 6.17 0.00 0.00 2.24
2705 3507 6.488006 GGTTTCATATGATGCCACAGAAGTAT 59.512 38.462 6.17 0.00 0.00 2.12
2707 3509 5.554070 TCATATGATGCCACAGAAGTATGG 58.446 41.667 0.00 0.00 39.16 2.74
2708 3510 3.939740 ATGATGCCACAGAAGTATGGT 57.060 42.857 0.00 0.00 38.34 3.55
2711 3513 6.686484 ATGATGCCACAGAAGTATGGTATA 57.314 37.500 0.00 0.00 40.90 1.47
2713 3515 6.288294 TGATGCCACAGAAGTATGGTATAAC 58.712 40.000 0.00 0.00 40.90 1.89
2717 3519 5.163343 GCCACAGAAGTATGGTATAACTCCA 60.163 44.000 0.00 0.00 38.34 3.86
2718 3520 6.631766 GCCACAGAAGTATGGTATAACTCCAA 60.632 42.308 0.00 0.00 38.52 3.53
2720 3522 6.986817 CACAGAAGTATGGTATAACTCCAAGG 59.013 42.308 0.00 0.00 38.52 3.61
2721 3523 6.901300 ACAGAAGTATGGTATAACTCCAAGGA 59.099 38.462 0.00 0.00 38.52 3.36
2722 3524 7.569111 ACAGAAGTATGGTATAACTCCAAGGAT 59.431 37.037 0.00 0.00 38.52 3.24
2739 4711 3.514539 AGGATGGAGCACTATATCAGCA 58.485 45.455 0.00 0.00 0.00 4.41
2741 4713 4.081031 AGGATGGAGCACTATATCAGCATG 60.081 45.833 0.00 0.00 37.54 4.06
2742 4714 3.690475 TGGAGCACTATATCAGCATGG 57.310 47.619 0.00 0.00 36.16 3.66
2745 4717 3.750130 GGAGCACTATATCAGCATGGTTG 59.250 47.826 0.00 0.00 36.16 3.77
2746 4718 4.503817 GGAGCACTATATCAGCATGGTTGA 60.504 45.833 0.00 0.00 36.16 3.18
2751 4723 7.886970 AGCACTATATCAGCATGGTTGATATTT 59.113 33.333 22.91 14.16 42.64 1.40
2752 4724 8.517878 GCACTATATCAGCATGGTTGATATTTT 58.482 33.333 22.91 13.94 42.64 1.82
2753 4725 9.836076 CACTATATCAGCATGGTTGATATTTTG 57.164 33.333 22.91 18.34 42.64 2.44
2755 4727 4.389890 TCAGCATGGTTGATATTTTGGC 57.610 40.909 0.00 0.00 36.16 4.52
2757 4729 3.023119 AGCATGGTTGATATTTTGGCGA 58.977 40.909 0.00 0.00 0.00 5.54
2758 4730 3.067180 AGCATGGTTGATATTTTGGCGAG 59.933 43.478 0.00 0.00 0.00 5.03
2759 4731 3.066621 GCATGGTTGATATTTTGGCGAGA 59.933 43.478 0.00 0.00 0.00 4.04
2760 4732 4.790766 GCATGGTTGATATTTTGGCGAGAG 60.791 45.833 0.00 0.00 0.00 3.20
2761 4733 3.278574 TGGTTGATATTTTGGCGAGAGG 58.721 45.455 0.00 0.00 0.00 3.69
2762 4734 2.618709 GGTTGATATTTTGGCGAGAGGG 59.381 50.000 0.00 0.00 0.00 4.30
2763 4735 2.618709 GTTGATATTTTGGCGAGAGGGG 59.381 50.000 0.00 0.00 0.00 4.79
2764 4736 1.142870 TGATATTTTGGCGAGAGGGGG 59.857 52.381 0.00 0.00 0.00 5.40
2767 4739 1.222567 ATTTTGGCGAGAGGGGGTAT 58.777 50.000 0.00 0.00 0.00 2.73
2768 4740 0.544697 TTTTGGCGAGAGGGGGTATC 59.455 55.000 0.00 0.00 0.00 2.24
2770 4742 2.122989 GGCGAGAGGGGGTATCCA 60.123 66.667 0.00 0.00 37.22 3.41
2771 4743 2.210711 GGCGAGAGGGGGTATCCAG 61.211 68.421 0.00 0.00 37.22 3.86
2772 4744 1.152525 GCGAGAGGGGGTATCCAGA 60.153 63.158 0.00 0.00 37.22 3.86
2773 4745 1.182385 GCGAGAGGGGGTATCCAGAG 61.182 65.000 0.00 0.00 37.22 3.35
2774 4746 1.182385 CGAGAGGGGGTATCCAGAGC 61.182 65.000 0.00 0.00 37.22 4.09
2775 4747 0.105453 GAGAGGGGGTATCCAGAGCA 60.105 60.000 0.00 0.00 37.22 4.26
2777 4749 0.689623 GAGGGGGTATCCAGAGCATG 59.310 60.000 0.00 0.00 37.22 4.06
2778 4750 1.073897 GGGGGTATCCAGAGCATGC 59.926 63.158 10.51 10.51 37.22 4.06
2779 4751 1.302033 GGGGTATCCAGAGCATGCG 60.302 63.158 13.01 0.00 35.00 4.73
2780 4752 1.748403 GGGTATCCAGAGCATGCGA 59.252 57.895 13.01 3.47 0.00 5.10
2781 4753 0.106708 GGGTATCCAGAGCATGCGAA 59.893 55.000 13.01 0.00 0.00 4.70
2782 4754 1.271054 GGGTATCCAGAGCATGCGAAT 60.271 52.381 13.01 5.40 0.00 3.34
2783 4755 1.802960 GGTATCCAGAGCATGCGAATG 59.197 52.381 13.01 12.08 0.00 2.67
2784 4756 2.548707 GGTATCCAGAGCATGCGAATGA 60.549 50.000 13.01 8.70 0.00 2.57
2785 4757 2.336945 ATCCAGAGCATGCGAATGAA 57.663 45.000 13.01 0.00 0.00 2.57
2786 4758 2.112380 TCCAGAGCATGCGAATGAAA 57.888 45.000 13.01 1.99 0.00 2.69
2787 4759 2.011947 TCCAGAGCATGCGAATGAAAG 58.988 47.619 13.01 0.76 0.00 2.62
2788 4760 1.533338 CCAGAGCATGCGAATGAAAGC 60.533 52.381 13.01 0.00 0.00 3.51
2794 4766 2.912986 TGCGAATGAAAGCAGACGT 58.087 47.368 0.00 0.00 38.59 4.34
2795 4767 1.225855 TGCGAATGAAAGCAGACGTT 58.774 45.000 0.00 0.00 38.59 3.99
2796 4768 1.194547 TGCGAATGAAAGCAGACGTTC 59.805 47.619 0.00 0.00 38.59 3.95
2797 4769 2.130815 CGAATGAAAGCAGACGTTCG 57.869 50.000 13.58 13.58 44.65 3.95
2798 4770 1.455786 CGAATGAAAGCAGACGTTCGT 59.544 47.619 16.99 0.00 44.82 3.85
2799 4771 2.718789 CGAATGAAAGCAGACGTTCGTG 60.719 50.000 16.99 0.00 44.82 4.35
2800 4772 1.865865 ATGAAAGCAGACGTTCGTGT 58.134 45.000 1.74 0.00 37.12 4.49
2801 4773 2.495409 TGAAAGCAGACGTTCGTGTA 57.505 45.000 1.74 0.00 37.12 2.90
2802 4774 3.021269 TGAAAGCAGACGTTCGTGTAT 57.979 42.857 1.74 0.00 37.12 2.29
2803 4775 2.729360 TGAAAGCAGACGTTCGTGTATG 59.271 45.455 1.74 0.54 37.12 2.39
2804 4776 1.710013 AAGCAGACGTTCGTGTATGG 58.290 50.000 1.74 0.00 31.86 2.74
2805 4777 0.108804 AGCAGACGTTCGTGTATGGG 60.109 55.000 1.74 0.00 31.86 4.00
2806 4778 1.082117 GCAGACGTTCGTGTATGGGG 61.082 60.000 1.74 0.00 31.86 4.96
2807 4779 0.528924 CAGACGTTCGTGTATGGGGA 59.471 55.000 1.74 0.00 0.00 4.81
2808 4780 0.815734 AGACGTTCGTGTATGGGGAG 59.184 55.000 1.74 0.00 0.00 4.30
2809 4781 0.804933 GACGTTCGTGTATGGGGAGC 60.805 60.000 1.74 0.00 0.00 4.70
2810 4782 1.255667 ACGTTCGTGTATGGGGAGCT 61.256 55.000 0.00 0.00 0.00 4.09
2811 4783 0.108329 CGTTCGTGTATGGGGAGCTT 60.108 55.000 0.00 0.00 0.00 3.74
2812 4784 1.674817 CGTTCGTGTATGGGGAGCTTT 60.675 52.381 0.00 0.00 0.00 3.51
2813 4785 1.737793 GTTCGTGTATGGGGAGCTTTG 59.262 52.381 0.00 0.00 0.00 2.77
2814 4786 0.392461 TCGTGTATGGGGAGCTTTGC 60.392 55.000 0.00 0.00 0.00 3.68
2815 4787 0.392998 CGTGTATGGGGAGCTTTGCT 60.393 55.000 0.00 0.00 43.88 3.91
2816 4788 1.839424 GTGTATGGGGAGCTTTGCTT 58.161 50.000 0.00 0.00 39.88 3.91
2817 4789 1.474077 GTGTATGGGGAGCTTTGCTTG 59.526 52.381 0.00 0.00 39.88 4.01
2818 4790 0.457443 GTATGGGGAGCTTTGCTTGC 59.543 55.000 0.00 0.00 39.88 4.01
2819 4791 0.039472 TATGGGGAGCTTTGCTTGCA 59.961 50.000 0.00 0.00 39.88 4.08
2820 4792 1.255667 ATGGGGAGCTTTGCTTGCAG 61.256 55.000 0.00 0.00 39.88 4.41
2821 4793 2.260743 GGGAGCTTTGCTTGCAGC 59.739 61.111 0.00 1.70 39.88 5.25
2823 4795 1.664306 GGAGCTTTGCTTGCAGCTT 59.336 52.632 10.02 0.00 46.72 3.74
2824 4796 0.666577 GGAGCTTTGCTTGCAGCTTG 60.667 55.000 10.02 0.00 46.72 4.01
2825 4797 1.282930 GAGCTTTGCTTGCAGCTTGC 61.283 55.000 10.02 0.00 46.72 4.01
2826 4798 2.315386 GCTTTGCTTGCAGCTTGCC 61.315 57.895 9.12 0.00 44.23 4.52
2827 4799 2.019951 CTTTGCTTGCAGCTTGCCG 61.020 57.895 9.12 0.00 44.23 5.69
2828 4800 3.502990 TTTGCTTGCAGCTTGCCGG 62.503 57.895 0.00 0.00 44.23 6.13
2831 4803 3.297620 CTTGCAGCTTGCCGGGTT 61.298 61.111 2.18 0.00 44.23 4.11
2832 4804 3.273080 CTTGCAGCTTGCCGGGTTC 62.273 63.158 2.18 0.00 44.23 3.62
2833 4805 4.577677 TGCAGCTTGCCGGGTTCA 62.578 61.111 2.18 0.00 44.23 3.18
2834 4806 3.064324 GCAGCTTGCCGGGTTCAT 61.064 61.111 2.18 0.00 37.42 2.57
2835 4807 1.748879 GCAGCTTGCCGGGTTCATA 60.749 57.895 2.18 0.00 37.42 2.15
2836 4808 1.312371 GCAGCTTGCCGGGTTCATAA 61.312 55.000 2.18 0.00 37.42 1.90
2837 4809 0.734889 CAGCTTGCCGGGTTCATAAG 59.265 55.000 2.18 0.00 0.00 1.73
2838 4810 0.618458 AGCTTGCCGGGTTCATAAGA 59.382 50.000 2.18 0.00 0.00 2.10
2839 4811 1.004277 AGCTTGCCGGGTTCATAAGAA 59.996 47.619 2.18 0.00 0.00 2.52
2854 4826 7.695480 TTCATAAGAACATCGATTTGGGAAA 57.305 32.000 0.00 0.00 0.00 3.13
2855 4827 7.320443 TCATAAGAACATCGATTTGGGAAAG 57.680 36.000 0.00 0.00 0.00 2.62
2856 4828 4.440839 AAGAACATCGATTTGGGAAAGC 57.559 40.909 0.00 0.00 0.00 3.51
2857 4829 3.420893 AGAACATCGATTTGGGAAAGCA 58.579 40.909 0.00 0.00 0.00 3.91
2858 4830 3.826157 AGAACATCGATTTGGGAAAGCAA 59.174 39.130 0.00 0.00 0.00 3.91
2859 4831 3.575965 ACATCGATTTGGGAAAGCAAC 57.424 42.857 0.00 0.00 0.00 4.17
2860 4832 3.157087 ACATCGATTTGGGAAAGCAACT 58.843 40.909 0.00 0.00 0.00 3.16
2861 4833 3.057315 ACATCGATTTGGGAAAGCAACTG 60.057 43.478 0.00 0.00 0.00 3.16
2862 4834 1.885887 TCGATTTGGGAAAGCAACTGG 59.114 47.619 0.00 0.00 0.00 4.00
2863 4835 1.669795 CGATTTGGGAAAGCAACTGGC 60.670 52.381 0.00 0.00 45.30 4.85
2878 5761 5.126067 GCAACTGGCTAGGATTATGAAGAA 58.874 41.667 0.85 0.00 40.25 2.52
2880 5763 6.458888 GCAACTGGCTAGGATTATGAAGAAAC 60.459 42.308 0.85 0.00 40.25 2.78
2882 5765 7.676683 ACTGGCTAGGATTATGAAGAAACTA 57.323 36.000 0.85 0.00 0.00 2.24
2887 5770 7.202011 GGCTAGGATTATGAAGAAACTAGGACA 60.202 40.741 0.00 0.00 0.00 4.02
2888 5771 8.371699 GCTAGGATTATGAAGAAACTAGGACAT 58.628 37.037 0.00 0.00 0.00 3.06
2890 5773 8.324191 AGGATTATGAAGAAACTAGGACATGA 57.676 34.615 0.00 0.00 0.00 3.07
2893 5776 4.826274 TGAAGAAACTAGGACATGAGGG 57.174 45.455 0.00 0.00 0.00 4.30
2894 5777 3.519510 TGAAGAAACTAGGACATGAGGGG 59.480 47.826 0.00 0.00 0.00 4.79
2895 5778 3.491766 AGAAACTAGGACATGAGGGGA 57.508 47.619 0.00 0.00 0.00 4.81
2896 5779 3.108376 AGAAACTAGGACATGAGGGGAC 58.892 50.000 0.00 0.00 0.00 4.46
2899 5782 1.343478 ACTAGGACATGAGGGGACTGG 60.343 57.143 0.00 0.00 44.43 4.00
2900 5783 0.691078 TAGGACATGAGGGGACTGGC 60.691 60.000 0.00 0.00 44.43 4.85
2901 5784 2.300967 GGACATGAGGGGACTGGCA 61.301 63.158 0.00 0.00 44.43 4.92
2902 5785 1.685224 GACATGAGGGGACTGGCAA 59.315 57.895 0.00 0.00 44.43 4.52
2903 5786 0.678048 GACATGAGGGGACTGGCAAC 60.678 60.000 0.00 0.00 44.43 4.17
2905 5788 0.038744 CATGAGGGGACTGGCAACTT 59.961 55.000 0.00 0.00 44.43 2.66
2906 5789 0.779997 ATGAGGGGACTGGCAACTTT 59.220 50.000 0.00 0.00 44.43 2.66
2907 5790 0.178992 TGAGGGGACTGGCAACTTTG 60.179 55.000 0.00 0.00 44.43 2.77
2909 5792 0.261696 AGGGGACTGGCAACTTTGTT 59.738 50.000 0.00 0.00 41.13 2.83
2910 5793 0.673985 GGGGACTGGCAACTTTGTTC 59.326 55.000 0.00 0.00 37.61 3.18
2911 5794 1.692411 GGGACTGGCAACTTTGTTCT 58.308 50.000 0.00 0.00 37.61 3.01
2912 5795 1.338020 GGGACTGGCAACTTTGTTCTG 59.662 52.381 0.00 0.00 37.61 3.02
2913 5796 1.269257 GGACTGGCAACTTTGTTCTGC 60.269 52.381 0.00 0.00 35.28 4.26
2914 5797 1.678101 GACTGGCAACTTTGTTCTGCT 59.322 47.619 0.00 0.00 36.32 4.24
2915 5798 1.406539 ACTGGCAACTTTGTTCTGCTG 59.593 47.619 0.00 0.00 36.32 4.41
2917 5800 1.405105 TGGCAACTTTGTTCTGCTGTC 59.595 47.619 0.00 0.00 36.32 3.51
2918 5801 1.269257 GGCAACTTTGTTCTGCTGTCC 60.269 52.381 0.00 0.00 36.32 4.02
2919 5802 1.405105 GCAACTTTGTTCTGCTGTCCA 59.595 47.619 0.00 0.00 33.20 4.02
2921 5804 3.438360 CAACTTTGTTCTGCTGTCCAAC 58.562 45.455 0.00 0.00 0.00 3.77
2922 5805 2.722094 ACTTTGTTCTGCTGTCCAACA 58.278 42.857 0.00 0.00 0.00 3.33
2923 5806 3.290710 ACTTTGTTCTGCTGTCCAACAT 58.709 40.909 0.00 0.00 30.28 2.71
2928 5811 4.650734 TGTTCTGCTGTCCAACATATTCA 58.349 39.130 0.00 0.00 0.00 2.57
2929 5812 4.696877 TGTTCTGCTGTCCAACATATTCAG 59.303 41.667 0.00 0.00 0.00 3.02
2930 5813 4.558226 TCTGCTGTCCAACATATTCAGT 57.442 40.909 0.00 0.00 0.00 3.41
2933 5816 2.098117 GCTGTCCAACATATTCAGTGCC 59.902 50.000 0.00 0.00 0.00 5.01
2936 5819 1.065491 TCCAACATATTCAGTGCCGCT 60.065 47.619 0.00 0.00 0.00 5.52
2937 5820 1.064505 CCAACATATTCAGTGCCGCTG 59.935 52.381 0.00 0.00 46.34 5.18
2939 5822 0.464373 ACATATTCAGTGCCGCTGGG 60.464 55.000 5.27 0.00 45.08 4.45
2940 5823 0.179048 CATATTCAGTGCCGCTGGGA 60.179 55.000 5.27 0.00 45.08 4.37
2941 5824 0.107456 ATATTCAGTGCCGCTGGGAG 59.893 55.000 5.27 0.00 45.08 4.30
2944 5827 4.335647 CAGTGCCGCTGGGAGGTT 62.336 66.667 0.00 0.00 41.42 3.50
2948 5831 4.162690 GCCGCTGGGAGGTTCGAT 62.163 66.667 0.00 0.00 34.06 3.59
2949 5832 2.202932 CCGCTGGGAGGTTCGATG 60.203 66.667 0.00 0.00 34.06 3.84
2950 5833 2.721167 CCGCTGGGAGGTTCGATGA 61.721 63.158 0.00 0.00 34.06 2.92
2951 5834 1.227089 CGCTGGGAGGTTCGATGAG 60.227 63.158 0.00 0.00 0.00 2.90
2952 5835 1.144936 GCTGGGAGGTTCGATGAGG 59.855 63.158 0.00 0.00 0.00 3.86
2953 5836 1.144936 CTGGGAGGTTCGATGAGGC 59.855 63.158 0.00 0.00 0.00 4.70
2954 5837 1.612146 TGGGAGGTTCGATGAGGCA 60.612 57.895 0.00 0.00 0.00 4.75
2955 5838 1.144936 GGGAGGTTCGATGAGGCAG 59.855 63.158 0.00 0.00 0.00 4.85
2956 5839 1.617947 GGGAGGTTCGATGAGGCAGT 61.618 60.000 0.00 0.00 0.00 4.40
2957 5840 1.112113 GGAGGTTCGATGAGGCAGTA 58.888 55.000 0.00 0.00 0.00 2.74
2960 5843 2.427453 GAGGTTCGATGAGGCAGTAGAA 59.573 50.000 0.00 0.00 0.00 2.10
2961 5844 2.428890 AGGTTCGATGAGGCAGTAGAAG 59.571 50.000 0.00 0.00 0.00 2.85
2962 5845 2.166664 GGTTCGATGAGGCAGTAGAAGT 59.833 50.000 0.00 0.00 0.00 3.01
2963 5846 3.368531 GGTTCGATGAGGCAGTAGAAGTT 60.369 47.826 0.00 0.00 0.00 2.66
2964 5847 3.784701 TCGATGAGGCAGTAGAAGTTC 57.215 47.619 0.00 0.00 0.00 3.01
2965 5848 2.097629 TCGATGAGGCAGTAGAAGTTCG 59.902 50.000 0.00 0.00 0.00 3.95
2966 5849 2.097629 CGATGAGGCAGTAGAAGTTCGA 59.902 50.000 0.00 0.00 0.00 3.71
2967 5850 3.427638 CGATGAGGCAGTAGAAGTTCGAA 60.428 47.826 0.00 0.00 0.00 3.71
2969 5852 5.505819 CGATGAGGCAGTAGAAGTTCGAATA 60.506 44.000 0.00 0.00 0.00 1.75
2970 5853 5.654603 TGAGGCAGTAGAAGTTCGAATAA 57.345 39.130 0.00 0.00 0.00 1.40
2971 5854 6.222038 TGAGGCAGTAGAAGTTCGAATAAT 57.778 37.500 0.00 0.00 0.00 1.28
2972 5855 7.342769 TGAGGCAGTAGAAGTTCGAATAATA 57.657 36.000 0.00 0.00 0.00 0.98
2973 5856 7.201145 TGAGGCAGTAGAAGTTCGAATAATAC 58.799 38.462 0.00 3.11 0.00 1.89
2974 5857 7.108841 AGGCAGTAGAAGTTCGAATAATACA 57.891 36.000 0.00 0.00 0.00 2.29
2976 5859 7.068348 AGGCAGTAGAAGTTCGAATAATACAGA 59.932 37.037 0.00 0.00 0.00 3.41
2977 5860 7.705325 GGCAGTAGAAGTTCGAATAATACAGAA 59.295 37.037 0.00 0.00 0.00 3.02
2978 5861 8.747666 GCAGTAGAAGTTCGAATAATACAGAAG 58.252 37.037 0.00 0.00 0.00 2.85
2979 5862 9.239002 CAGTAGAAGTTCGAATAATACAGAAGG 57.761 37.037 0.00 0.00 0.00 3.46
2980 5863 9.186837 AGTAGAAGTTCGAATAATACAGAAGGA 57.813 33.333 0.00 0.00 0.00 3.36
2981 5864 9.453325 GTAGAAGTTCGAATAATACAGAAGGAG 57.547 37.037 0.00 0.00 0.00 3.69
2984 5867 8.934507 AAGTTCGAATAATACAGAAGGAGAAG 57.065 34.615 0.00 0.00 0.00 2.85
2986 5869 6.406692 TCGAATAATACAGAAGGAGAAGGG 57.593 41.667 0.00 0.00 0.00 3.95
2987 5870 5.304614 TCGAATAATACAGAAGGAGAAGGGG 59.695 44.000 0.00 0.00 0.00 4.79
2988 5871 5.070580 CGAATAATACAGAAGGAGAAGGGGT 59.929 44.000 0.00 0.00 0.00 4.95
2989 5872 6.408206 CGAATAATACAGAAGGAGAAGGGGTT 60.408 42.308 0.00 0.00 0.00 4.11
2992 5875 2.418669 ACAGAAGGAGAAGGGGTTCAA 58.581 47.619 0.00 0.00 0.00 2.69
2993 5876 2.373502 ACAGAAGGAGAAGGGGTTCAAG 59.626 50.000 0.00 0.00 0.00 3.02
2994 5877 2.639839 CAGAAGGAGAAGGGGTTCAAGA 59.360 50.000 0.00 0.00 0.00 3.02
2995 5878 3.073062 CAGAAGGAGAAGGGGTTCAAGAA 59.927 47.826 0.00 0.00 0.00 2.52
2996 5879 3.329225 AGAAGGAGAAGGGGTTCAAGAAG 59.671 47.826 0.00 0.00 0.00 2.85
2997 5880 2.991580 AGGAGAAGGGGTTCAAGAAGA 58.008 47.619 0.00 0.00 0.00 2.87
2998 5881 2.909662 AGGAGAAGGGGTTCAAGAAGAG 59.090 50.000 0.00 0.00 0.00 2.85
2999 5882 2.616765 GGAGAAGGGGTTCAAGAAGAGC 60.617 54.545 0.00 0.00 0.00 4.09
3000 5883 1.352687 AGAAGGGGTTCAAGAAGAGCC 59.647 52.381 0.00 0.00 46.13 4.70
3004 5887 3.256281 GGTTCAAGAAGAGCCCTGG 57.744 57.895 0.00 0.00 41.44 4.45
3005 5888 0.962855 GGTTCAAGAAGAGCCCTGGC 60.963 60.000 0.00 0.00 41.44 4.85
3015 5898 4.666253 GCCCTGGCTGCAGTTGGA 62.666 66.667 16.64 0.00 38.26 3.53
3016 5899 2.357836 CCCTGGCTGCAGTTGGAT 59.642 61.111 16.64 0.00 0.00 3.41
3017 5900 2.050350 CCCTGGCTGCAGTTGGATG 61.050 63.158 16.64 0.00 0.00 3.51
3018 5901 1.303888 CCTGGCTGCAGTTGGATGT 60.304 57.895 16.64 0.00 0.00 3.06
3019 5902 1.310933 CCTGGCTGCAGTTGGATGTC 61.311 60.000 16.64 0.00 0.00 3.06
3021 5904 0.983467 TGGCTGCAGTTGGATGTCTA 59.017 50.000 16.64 0.00 0.00 2.59
3022 5905 1.065926 TGGCTGCAGTTGGATGTCTAG 60.066 52.381 16.64 0.00 0.00 2.43
3023 5906 1.208052 GGCTGCAGTTGGATGTCTAGA 59.792 52.381 16.64 0.00 0.00 2.43
3024 5907 2.548875 GCTGCAGTTGGATGTCTAGAG 58.451 52.381 16.64 0.00 0.00 2.43
3025 5908 2.093764 GCTGCAGTTGGATGTCTAGAGT 60.094 50.000 16.64 0.00 0.00 3.24
3026 5909 3.779759 CTGCAGTTGGATGTCTAGAGTC 58.220 50.000 5.25 0.00 0.00 3.36
3027 5910 3.435275 TGCAGTTGGATGTCTAGAGTCT 58.565 45.455 0.00 0.00 0.00 3.24
3029 5912 3.430098 GCAGTTGGATGTCTAGAGTCTGG 60.430 52.174 1.86 0.00 0.00 3.86
3030 5913 3.766591 CAGTTGGATGTCTAGAGTCTGGT 59.233 47.826 1.86 0.00 0.00 4.00
3032 5915 4.464597 AGTTGGATGTCTAGAGTCTGGTTC 59.535 45.833 1.86 0.00 0.00 3.62
3033 5916 4.047627 TGGATGTCTAGAGTCTGGTTCA 57.952 45.455 1.86 4.90 0.00 3.18
3034 5917 4.614475 TGGATGTCTAGAGTCTGGTTCAT 58.386 43.478 1.86 9.37 0.00 2.57
3035 5918 4.403752 TGGATGTCTAGAGTCTGGTTCATG 59.596 45.833 16.34 0.00 0.00 3.07
3036 5919 4.646945 GGATGTCTAGAGTCTGGTTCATGA 59.353 45.833 16.34 0.00 0.00 3.07
3037 5920 5.451242 GGATGTCTAGAGTCTGGTTCATGAC 60.451 48.000 16.34 3.67 0.00 3.06
3049 5932 4.756084 GGTTCATGACCTCTCAGTTTTG 57.244 45.455 0.00 0.00 45.55 2.44
3050 5933 4.137543 GGTTCATGACCTCTCAGTTTTGT 58.862 43.478 0.00 0.00 45.55 2.83
3051 5934 4.214332 GGTTCATGACCTCTCAGTTTTGTC 59.786 45.833 0.00 0.00 45.55 3.18
3052 5935 4.963318 TCATGACCTCTCAGTTTTGTCT 57.037 40.909 0.00 0.00 0.00 3.41
3054 5937 6.419484 TCATGACCTCTCAGTTTTGTCTTA 57.581 37.500 0.00 0.00 0.00 2.10
3056 5939 8.134202 TCATGACCTCTCAGTTTTGTCTTATA 57.866 34.615 0.00 0.00 0.00 0.98
3057 5940 8.762645 TCATGACCTCTCAGTTTTGTCTTATAT 58.237 33.333 0.00 0.00 0.00 0.86
3059 5942 8.134202 TGACCTCTCAGTTTTGTCTTATATCA 57.866 34.615 0.00 0.00 0.00 2.15
3060 5943 8.253810 TGACCTCTCAGTTTTGTCTTATATCAG 58.746 37.037 0.00 0.00 0.00 2.90
3062 5945 8.254508 ACCTCTCAGTTTTGTCTTATATCAGTC 58.745 37.037 0.00 0.00 0.00 3.51
3063 5946 8.253810 CCTCTCAGTTTTGTCTTATATCAGTCA 58.746 37.037 0.00 0.00 0.00 3.41
3064 5947 9.814899 CTCTCAGTTTTGTCTTATATCAGTCAT 57.185 33.333 0.00 0.00 0.00 3.06
3067 5950 9.942850 TCAGTTTTGTCTTATATCAGTCATTCA 57.057 29.630 0.00 0.00 0.00 2.57
3069 5952 8.887717 AGTTTTGTCTTATATCAGTCATTCAGC 58.112 33.333 0.00 0.00 0.00 4.26
3070 5953 8.887717 GTTTTGTCTTATATCAGTCATTCAGCT 58.112 33.333 0.00 0.00 0.00 4.24
3071 5954 9.453572 TTTTGTCTTATATCAGTCATTCAGCTT 57.546 29.630 0.00 0.00 0.00 3.74
3073 5956 6.481313 TGTCTTATATCAGTCATTCAGCTTGC 59.519 38.462 0.00 0.00 0.00 4.01
3075 5958 7.172875 GTCTTATATCAGTCATTCAGCTTGCAT 59.827 37.037 0.00 0.00 0.00 3.96
3076 5959 5.690997 ATATCAGTCATTCAGCTTGCATG 57.309 39.130 0.00 0.00 0.00 4.06
3077 5960 2.786777 TCAGTCATTCAGCTTGCATGT 58.213 42.857 1.14 0.00 0.00 3.21
3078 5961 2.745821 TCAGTCATTCAGCTTGCATGTC 59.254 45.455 1.14 0.00 0.00 3.06
3079 5962 2.747989 CAGTCATTCAGCTTGCATGTCT 59.252 45.455 1.14 0.00 0.00 3.41
3080 5963 3.190744 CAGTCATTCAGCTTGCATGTCTT 59.809 43.478 1.14 0.00 0.00 3.01
3081 5964 3.190744 AGTCATTCAGCTTGCATGTCTTG 59.809 43.478 1.14 0.00 0.00 3.02
3082 5965 3.189910 GTCATTCAGCTTGCATGTCTTGA 59.810 43.478 1.14 1.32 0.00 3.02
3084 5967 3.631145 TTCAGCTTGCATGTCTTGAAC 57.369 42.857 1.14 0.00 0.00 3.18
3085 5968 2.574450 TCAGCTTGCATGTCTTGAACA 58.426 42.857 1.14 0.00 43.51 3.18
3087 5970 1.268899 AGCTTGCATGTCTTGAACAGC 59.731 47.619 1.14 0.00 42.37 4.40
3088 5971 1.959747 CTTGCATGTCTTGAACAGCG 58.040 50.000 0.00 0.00 42.37 5.18
3089 5972 0.592637 TTGCATGTCTTGAACAGCGG 59.407 50.000 0.00 0.00 42.37 5.52
3091 5974 0.445436 GCATGTCTTGAACAGCGGAG 59.555 55.000 0.00 0.00 42.37 4.63
3105 5988 2.334307 CGGAGCATTTAGGGCATGG 58.666 57.895 0.00 0.00 0.00 3.66
3106 5989 1.799258 CGGAGCATTTAGGGCATGGC 61.799 60.000 11.56 11.56 0.00 4.40
3119 6002 1.669440 CATGGCCAATGCATAGCCC 59.331 57.895 28.68 16.97 46.55 5.19
3120 6003 1.534717 ATGGCCAATGCATAGCCCC 60.535 57.895 28.68 15.48 46.55 5.80
3122 6005 2.205152 GGCCAATGCATAGCCCCAG 61.205 63.158 23.94 0.85 41.00 4.45
3123 6006 2.205152 GCCAATGCATAGCCCCAGG 61.205 63.158 0.00 0.00 37.47 4.45
3124 6007 1.532316 CCAATGCATAGCCCCAGGG 60.532 63.158 0.00 0.00 38.57 4.45
3126 6009 1.111116 CAATGCATAGCCCCAGGGTG 61.111 60.000 4.22 0.00 37.65 4.61
3127 6010 1.288508 AATGCATAGCCCCAGGGTGA 61.289 55.000 4.22 0.00 37.65 4.02
3128 6011 1.070127 ATGCATAGCCCCAGGGTGAT 61.070 55.000 4.22 0.00 37.65 3.06
3129 6012 1.228367 GCATAGCCCCAGGGTGATG 60.228 63.158 4.22 9.26 37.65 3.07
3130 6013 1.999634 GCATAGCCCCAGGGTGATGT 62.000 60.000 4.22 0.00 37.65 3.06
3131 6014 0.109342 CATAGCCCCAGGGTGATGTC 59.891 60.000 4.22 0.00 37.65 3.06
3133 6016 0.691078 TAGCCCCAGGGTGATGTCTC 60.691 60.000 4.22 0.00 37.65 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 44 2.091333 TGCTTTCCTCCCTCCTTGTTTT 60.091 45.455 0.00 0.00 0.00 2.43
43 45 1.499007 TGCTTTCCTCCCTCCTTGTTT 59.501 47.619 0.00 0.00 0.00 2.83
44 46 1.149101 TGCTTTCCTCCCTCCTTGTT 58.851 50.000 0.00 0.00 0.00 2.83
45 47 1.005215 CATGCTTTCCTCCCTCCTTGT 59.995 52.381 0.00 0.00 0.00 3.16
103 107 7.333423 CCAGACGGTAAAGATTTTAGATTGACA 59.667 37.037 0.00 0.00 0.00 3.58
156 161 3.457234 CCGCATGTGAGCTTACTGATTA 58.543 45.455 8.11 0.00 0.00 1.75
195 217 1.343465 AGGCCGGTTTGGATATCTACG 59.657 52.381 1.90 0.00 42.00 3.51
196 218 2.367567 TGAGGCCGGTTTGGATATCTAC 59.632 50.000 1.90 0.00 42.00 2.59
197 219 2.367567 GTGAGGCCGGTTTGGATATCTA 59.632 50.000 1.90 0.00 42.00 1.98
198 220 1.141053 GTGAGGCCGGTTTGGATATCT 59.859 52.381 1.90 0.00 42.00 1.98
209 231 1.815421 CCGAAAGATGTGAGGCCGG 60.815 63.158 0.00 0.00 0.00 6.13
210 232 2.464459 GCCGAAAGATGTGAGGCCG 61.464 63.158 0.00 0.00 41.81 6.13
211 233 2.464459 CGCCGAAAGATGTGAGGCC 61.464 63.158 0.00 0.00 44.56 5.19
212 234 1.019278 TTCGCCGAAAGATGTGAGGC 61.019 55.000 0.00 0.00 44.00 4.70
218 240 2.010145 TTCTCCTTCGCCGAAAGATG 57.990 50.000 0.00 0.00 0.00 2.90
233 255 2.011540 ATCCGTTCGGCTTCTTTCTC 57.988 50.000 6.35 0.00 0.00 2.87
245 267 9.715121 TTTATATATCCTGTGGTTTATCCGTTC 57.285 33.333 0.00 0.00 39.52 3.95
333 359 1.938585 TCGACACCTCAAGGGATTCT 58.061 50.000 0.29 0.00 40.27 2.40
349 375 4.553547 CGCATATATCTGATGCTCGATCGA 60.554 45.833 18.32 18.32 46.16 3.59
350 376 3.663105 CGCATATATCTGATGCTCGATCG 59.337 47.826 9.36 9.36 46.16 3.69
351 377 3.424861 GCGCATATATCTGATGCTCGATC 59.575 47.826 0.30 0.00 46.16 3.69
352 378 3.379240 GCGCATATATCTGATGCTCGAT 58.621 45.455 0.30 0.00 46.16 3.59
382 412 7.531857 CCTAGAATAGAATGTAGGCAAGAGA 57.468 40.000 0.00 0.00 42.77 3.10
418 450 1.855978 CTTCACAAGCACGTTACACGA 59.144 47.619 2.75 0.00 46.05 4.35
427 459 3.375299 GGTCCACATATCTTCACAAGCAC 59.625 47.826 0.00 0.00 0.00 4.40
453 485 7.934855 AGATATGGATGCATCAAGTTATTCC 57.065 36.000 27.25 9.56 0.00 3.01
454 486 7.754027 GCAAGATATGGATGCATCAAGTTATTC 59.246 37.037 27.25 13.70 0.00 1.75
455 487 7.450634 AGCAAGATATGGATGCATCAAGTTATT 59.549 33.333 27.25 12.29 0.00 1.40
456 488 6.946583 AGCAAGATATGGATGCATCAAGTTAT 59.053 34.615 27.25 16.63 0.00 1.89
457 489 6.301486 AGCAAGATATGGATGCATCAAGTTA 58.699 36.000 27.25 13.00 0.00 2.24
591 634 2.625823 CGTGGCTGCCGAACCATTT 61.626 57.895 14.98 0.00 38.46 2.32
597 640 0.462375 ACATATACGTGGCTGCCGAA 59.538 50.000 14.98 0.00 0.00 4.30
615 688 5.705441 TCTCATGGGAAAAACAGTCACATAC 59.295 40.000 0.00 0.00 37.00 2.39
618 691 4.163441 TCTCATGGGAAAAACAGTCACA 57.837 40.909 0.00 0.00 31.67 3.58
620 693 5.048782 CGATTTCTCATGGGAAAAACAGTCA 60.049 40.000 24.03 0.00 38.46 3.41
624 697 3.056891 GGCGATTTCTCATGGGAAAAACA 60.057 43.478 24.03 2.06 38.46 2.83
625 698 3.193479 AGGCGATTTCTCATGGGAAAAAC 59.807 43.478 24.03 18.50 38.46 2.43
633 706 4.051237 TGTCGATAAGGCGATTTCTCATG 58.949 43.478 0.00 0.00 42.82 3.07
634 707 4.322080 TGTCGATAAGGCGATTTCTCAT 57.678 40.909 0.00 0.00 42.82 2.90
685 942 9.430623 CCGGATAAAATTTACCAAAAGTTCATT 57.569 29.630 0.00 0.00 32.04 2.57
686 943 8.808092 TCCGGATAAAATTTACCAAAAGTTCAT 58.192 29.630 0.00 0.00 32.04 2.57
691 948 8.254508 TGGAATCCGGATAAAATTTACCAAAAG 58.745 33.333 19.48 0.00 0.00 2.27
697 954 9.810545 TGAATTTGGAATCCGGATAAAATTTAC 57.189 29.630 28.38 21.88 29.82 2.01
745 1002 2.029606 GGTAACCGAAAAATACCGAGCG 59.970 50.000 0.00 0.00 30.61 5.03
746 1003 3.002102 TGGTAACCGAAAAATACCGAGC 58.998 45.455 0.00 0.00 41.62 5.03
747 1004 3.061161 CGTGGTAACCGAAAAATACCGAG 59.939 47.826 0.00 0.00 41.62 4.63
748 1005 2.992543 CGTGGTAACCGAAAAATACCGA 59.007 45.455 0.00 0.00 41.62 4.69
749 1006 2.094099 CCGTGGTAACCGAAAAATACCG 59.906 50.000 0.00 0.00 41.62 4.02
750 1007 3.073678 ACCGTGGTAACCGAAAAATACC 58.926 45.455 0.00 0.00 39.62 2.73
751 1008 5.854431 TTACCGTGGTAACCGAAAAATAC 57.146 39.130 7.40 0.00 35.88 1.89
769 1026 2.104281 AGCACCCAGATATTCGGTTACC 59.896 50.000 0.00 0.00 0.00 2.85
770 1027 3.470645 AGCACCCAGATATTCGGTTAC 57.529 47.619 0.00 0.00 0.00 2.50
772 1029 2.769663 TGTAGCACCCAGATATTCGGTT 59.230 45.455 0.00 0.00 0.00 4.44
775 1032 4.021981 TCTCATGTAGCACCCAGATATTCG 60.022 45.833 0.00 0.00 0.00 3.34
778 1035 6.445451 AAATCTCATGTAGCACCCAGATAT 57.555 37.500 0.00 0.00 0.00 1.63
779 1036 5.894298 AAATCTCATGTAGCACCCAGATA 57.106 39.130 0.00 0.00 0.00 1.98
805 1066 6.385033 GTCAAAGTTTTGGATTCCAGATGAG 58.615 40.000 5.36 0.00 38.66 2.90
810 1071 4.568152 ACGTCAAAGTTTTGGATTCCAG 57.432 40.909 5.36 0.00 38.66 3.86
814 1075 7.033185 GGCATATAACGTCAAAGTTTTGGATT 58.967 34.615 4.89 1.01 38.66 3.01
816 1077 5.708230 AGGCATATAACGTCAAAGTTTTGGA 59.292 36.000 4.89 0.00 38.66 3.53
824 1085 5.432645 TGATTGGAGGCATATAACGTCAAA 58.567 37.500 0.00 0.00 0.00 2.69
830 1091 6.372659 CACCTGTATGATTGGAGGCATATAAC 59.627 42.308 0.00 0.00 30.50 1.89
835 1096 2.511218 ACACCTGTATGATTGGAGGCAT 59.489 45.455 0.00 0.00 0.00 4.40
842 1103 2.159296 TCCGTCGACACCTGTATGATTG 60.159 50.000 17.16 0.00 0.00 2.67
843 1104 2.097036 TCCGTCGACACCTGTATGATT 58.903 47.619 17.16 0.00 0.00 2.57
845 1106 0.806868 GTCCGTCGACACCTGTATGA 59.193 55.000 17.16 0.00 38.99 2.15
846 1107 0.522705 CGTCCGTCGACACCTGTATG 60.523 60.000 17.16 0.00 42.86 2.39
847 1108 0.674581 TCGTCCGTCGACACCTGTAT 60.675 55.000 17.16 0.00 44.01 2.29
848 1109 1.293963 CTCGTCCGTCGACACCTGTA 61.294 60.000 17.16 0.00 44.01 2.74
849 1110 2.592574 TCGTCCGTCGACACCTGT 60.593 61.111 17.16 0.00 44.01 4.00
850 1111 1.848932 TTCTCGTCCGTCGACACCTG 61.849 60.000 17.16 2.37 44.01 4.00
851 1112 0.959372 ATTCTCGTCCGTCGACACCT 60.959 55.000 17.16 0.00 44.01 4.00
852 1113 0.797249 CATTCTCGTCCGTCGACACC 60.797 60.000 17.16 1.06 44.01 4.16
854 1115 1.092348 ATCATTCTCGTCCGTCGACA 58.908 50.000 17.16 0.00 44.01 4.35
855 1116 2.906153 CTATCATTCTCGTCCGTCGAC 58.094 52.381 5.18 5.18 44.01 4.20
856 1117 1.263484 GCTATCATTCTCGTCCGTCGA 59.737 52.381 0.00 0.53 46.83 4.20
857 1118 1.663445 GGCTATCATTCTCGTCCGTCG 60.663 57.143 0.00 0.00 41.41 5.12
858 1119 1.663445 CGGCTATCATTCTCGTCCGTC 60.663 57.143 0.00 0.00 0.00 4.79
859 1120 0.311165 CGGCTATCATTCTCGTCCGT 59.689 55.000 0.00 0.00 0.00 4.69
860 1121 0.387367 CCGGCTATCATTCTCGTCCG 60.387 60.000 0.00 0.00 35.60 4.79
861 1122 0.959553 TCCGGCTATCATTCTCGTCC 59.040 55.000 0.00 0.00 0.00 4.79
862 1123 2.795175 TTCCGGCTATCATTCTCGTC 57.205 50.000 0.00 0.00 0.00 4.20
863 1124 5.407407 AATATTCCGGCTATCATTCTCGT 57.593 39.130 0.00 0.00 0.00 4.18
864 1125 6.147821 ACAAAATATTCCGGCTATCATTCTCG 59.852 38.462 0.00 0.00 0.00 4.04
865 1126 7.440523 ACAAAATATTCCGGCTATCATTCTC 57.559 36.000 0.00 0.00 0.00 2.87
866 1127 7.823745 AACAAAATATTCCGGCTATCATTCT 57.176 32.000 0.00 0.00 0.00 2.40
867 1128 7.595130 GGAAACAAAATATTCCGGCTATCATTC 59.405 37.037 0.00 0.00 36.09 2.67
868 1129 7.069331 TGGAAACAAAATATTCCGGCTATCATT 59.931 33.333 0.00 0.00 46.58 2.57
869 1130 6.549364 TGGAAACAAAATATTCCGGCTATCAT 59.451 34.615 0.00 0.00 46.58 2.45
940 1215 6.187727 TGGGAAGGAGGAATGTAATGTATC 57.812 41.667 0.00 0.00 0.00 2.24
945 1220 3.126453 AGCTGGGAAGGAGGAATGTAAT 58.874 45.455 0.00 0.00 0.00 1.89
954 1229 2.867109 TCTTTCAAGCTGGGAAGGAG 57.133 50.000 9.42 2.16 0.00 3.69
958 1233 3.370104 TGGTTTTCTTTCAAGCTGGGAA 58.630 40.909 0.00 0.00 0.00 3.97
980 1258 3.576078 TTGTTGAACCTCTGGTGATGT 57.424 42.857 0.00 0.00 35.34 3.06
992 1270 0.310543 TCTGTGCGCCATTGTTGAAC 59.689 50.000 4.18 0.00 0.00 3.18
1266 1550 2.994995 ATGACCTCGCCCACGTCA 60.995 61.111 0.00 0.00 40.58 4.35
1347 1643 0.984230 CCTTGCAGACCTGGTAGGAA 59.016 55.000 6.75 6.21 37.67 3.36
1385 1681 2.037367 TGAGGTAGAGCAGGCCGT 59.963 61.111 0.00 0.00 0.00 5.68
1575 1883 0.316689 GTTTTGGAGACGGCAACACG 60.317 55.000 0.00 0.00 40.31 4.49
1773 2528 0.539051 CGGCTGTCCTTGGAGAAGAT 59.461 55.000 4.09 0.00 0.00 2.40
1774 2529 1.544825 CCGGCTGTCCTTGGAGAAGA 61.545 60.000 0.00 0.00 0.00 2.87
1813 2568 1.613255 GCCGGGTGATTTTGGAGAAGA 60.613 52.381 2.18 0.00 0.00 2.87
1833 2588 4.478195 GGAGACGACACATGTCCG 57.522 61.111 13.70 13.70 41.86 4.79
1968 2729 2.285220 CGACGGCATGGCTATATTATGC 59.715 50.000 18.09 0.00 44.81 3.14
2037 2801 1.695114 CCACCGCCTCACCATATGGA 61.695 60.000 28.77 5.82 38.94 3.41
2154 2923 1.060698 GCCGACACGCTCTTGTTATTC 59.939 52.381 0.00 0.00 0.00 1.75
2174 2943 5.989168 TGCCGACTTATATTTAGGTGATGTG 59.011 40.000 0.00 0.00 0.00 3.21
2220 2989 9.999660 TGTAGTACTAGATCATGACTACCTTAG 57.000 37.037 17.48 6.05 41.07 2.18
2249 3018 4.997395 CAGTACAGCCAACAAACTATCACT 59.003 41.667 0.00 0.00 0.00 3.41
2250 3019 4.378459 GCAGTACAGCCAACAAACTATCAC 60.378 45.833 0.00 0.00 0.00 3.06
2253 3022 4.021102 AGCAGTACAGCCAACAAACTAT 57.979 40.909 6.63 0.00 34.23 2.12
2255 3024 2.348411 AGCAGTACAGCCAACAAACT 57.652 45.000 6.63 0.00 34.23 2.66
2256 3025 3.399330 TCTAGCAGTACAGCCAACAAAC 58.601 45.455 6.63 0.00 34.23 2.93
2258 3027 3.981071 ATCTAGCAGTACAGCCAACAA 57.019 42.857 6.63 0.00 34.23 2.83
2259 3028 4.709886 TCTTATCTAGCAGTACAGCCAACA 59.290 41.667 6.63 0.00 34.23 3.33
2267 3036 5.230306 CACGCTTGTTCTTATCTAGCAGTAC 59.770 44.000 0.00 0.00 34.43 2.73
2272 3041 2.285488 GGCACGCTTGTTCTTATCTAGC 59.715 50.000 0.00 0.00 0.00 3.42
2283 3052 0.673644 GTACCTCATGGCACGCTTGT 60.674 55.000 0.00 0.00 36.63 3.16
2288 3057 2.351726 GCTTTTAGTACCTCATGGCACG 59.648 50.000 0.00 0.00 34.81 5.34
2291 3060 3.810386 GCTAGCTTTTAGTACCTCATGGC 59.190 47.826 7.70 0.00 36.63 4.40
2316 3114 7.977853 ACCGACTTATATACACCACTAAAACAG 59.022 37.037 0.00 0.00 0.00 3.16
2333 3131 8.556213 TCTTATTGCTTTTACAACCGACTTAT 57.444 30.769 0.00 0.00 31.03 1.73
2409 3211 2.110213 TGAGACCACCGCCACAAC 59.890 61.111 0.00 0.00 0.00 3.32
2447 3249 9.932207 TTCGTAGGTGTAGAAATTTCAGAAATA 57.068 29.630 19.99 0.73 0.00 1.40
2448 3250 8.718734 GTTCGTAGGTGTAGAAATTTCAGAAAT 58.281 33.333 19.99 2.20 0.00 2.17
2449 3251 7.711772 TGTTCGTAGGTGTAGAAATTTCAGAAA 59.288 33.333 19.99 0.00 0.00 2.52
2450 3252 7.211573 TGTTCGTAGGTGTAGAAATTTCAGAA 58.788 34.615 19.99 2.63 0.00 3.02
2451 3253 6.751157 TGTTCGTAGGTGTAGAAATTTCAGA 58.249 36.000 19.99 4.91 0.00 3.27
2452 3254 6.401153 GCTGTTCGTAGGTGTAGAAATTTCAG 60.401 42.308 19.99 5.36 0.00 3.02
2453 3255 5.407387 GCTGTTCGTAGGTGTAGAAATTTCA 59.593 40.000 19.99 3.83 0.00 2.69
2454 3256 5.638234 AGCTGTTCGTAGGTGTAGAAATTTC 59.362 40.000 10.33 10.33 0.00 2.17
2455 3257 5.408604 CAGCTGTTCGTAGGTGTAGAAATTT 59.591 40.000 5.25 0.00 40.38 1.82
2456 3258 4.929808 CAGCTGTTCGTAGGTGTAGAAATT 59.070 41.667 5.25 0.00 40.38 1.82
2457 3259 4.495422 CAGCTGTTCGTAGGTGTAGAAAT 58.505 43.478 5.25 0.00 40.38 2.17
2458 3260 3.909430 CAGCTGTTCGTAGGTGTAGAAA 58.091 45.455 5.25 0.00 40.38 2.52
2459 3261 3.570926 CAGCTGTTCGTAGGTGTAGAA 57.429 47.619 5.25 0.00 40.38 2.10
2465 3267 1.610522 ACGTAACAGCTGTTCGTAGGT 59.389 47.619 34.63 26.64 38.74 3.08
2466 3268 2.342910 ACGTAACAGCTGTTCGTAGG 57.657 50.000 34.63 26.15 38.74 3.18
2467 3269 3.605486 GGTTACGTAACAGCTGTTCGTAG 59.395 47.826 35.05 27.17 40.84 3.51
2468 3270 3.253188 AGGTTACGTAACAGCTGTTCGTA 59.747 43.478 34.57 34.57 39.97 3.43
2469 3271 2.035066 AGGTTACGTAACAGCTGTTCGT 59.965 45.455 35.93 35.93 41.18 3.85
2470 3272 2.669364 AGGTTACGTAACAGCTGTTCG 58.331 47.619 34.29 32.55 39.31 3.95
2471 3273 3.605486 CGTAGGTTACGTAACAGCTGTTC 59.395 47.826 34.29 23.07 46.41 3.18
2472 3274 3.568538 CGTAGGTTACGTAACAGCTGTT 58.431 45.455 32.97 32.97 46.41 3.16
2473 3275 3.207474 CGTAGGTTACGTAACAGCTGT 57.793 47.619 32.93 15.25 46.41 4.40
2483 3285 8.591944 GCGTTTTAGCAAATTACGTAGGTTACG 61.592 40.741 7.05 7.05 46.21 3.18
2484 3286 6.462636 GCGTTTTAGCAAATTACGTAGGTTAC 59.537 38.462 0.00 0.00 37.05 2.50
2485 3287 6.368516 AGCGTTTTAGCAAATTACGTAGGTTA 59.631 34.615 0.00 0.00 40.15 2.85
2486 3288 5.179929 AGCGTTTTAGCAAATTACGTAGGTT 59.820 36.000 0.00 0.00 40.15 3.50
2487 3289 4.692155 AGCGTTTTAGCAAATTACGTAGGT 59.308 37.500 0.00 0.00 40.15 3.08
2488 3290 5.212589 AGCGTTTTAGCAAATTACGTAGG 57.787 39.130 0.00 0.00 40.15 3.18
2489 3291 8.111836 TGATTAGCGTTTTAGCAAATTACGTAG 58.888 33.333 0.00 0.00 40.15 3.51
2490 3292 7.961855 TGATTAGCGTTTTAGCAAATTACGTA 58.038 30.769 0.00 0.00 40.15 3.57
2491 3293 6.833839 TGATTAGCGTTTTAGCAAATTACGT 58.166 32.000 0.00 0.00 40.15 3.57
2492 3294 7.713792 TTGATTAGCGTTTTAGCAAATTACG 57.286 32.000 0.00 0.00 40.15 3.18
2493 3295 8.370321 GGTTTGATTAGCGTTTTAGCAAATTAC 58.630 33.333 0.00 0.00 40.15 1.89
2494 3296 7.271653 CGGTTTGATTAGCGTTTTAGCAAATTA 59.728 33.333 0.00 0.00 40.15 1.40
2495 3297 6.088883 CGGTTTGATTAGCGTTTTAGCAAATT 59.911 34.615 0.00 0.00 40.15 1.82
2496 3298 5.571357 CGGTTTGATTAGCGTTTTAGCAAAT 59.429 36.000 0.00 0.00 40.15 2.32
2497 3299 4.912766 CGGTTTGATTAGCGTTTTAGCAAA 59.087 37.500 0.00 0.00 40.15 3.68
2498 3300 4.468643 CGGTTTGATTAGCGTTTTAGCAA 58.531 39.130 0.00 0.00 40.15 3.91
2499 3301 3.668491 GCGGTTTGATTAGCGTTTTAGCA 60.668 43.478 0.00 0.00 40.84 3.49
2500 3302 2.844223 GCGGTTTGATTAGCGTTTTAGC 59.156 45.455 0.00 0.00 40.84 3.09
2501 3303 3.422655 GGCGGTTTGATTAGCGTTTTAG 58.577 45.455 0.00 0.00 40.84 1.85
2502 3304 2.162008 GGGCGGTTTGATTAGCGTTTTA 59.838 45.455 0.00 0.00 40.84 1.52
2503 3305 1.068125 GGGCGGTTTGATTAGCGTTTT 60.068 47.619 0.00 0.00 40.84 2.43
2504 3306 0.524414 GGGCGGTTTGATTAGCGTTT 59.476 50.000 0.00 0.00 40.84 3.60
2505 3307 1.310216 GGGGCGGTTTGATTAGCGTT 61.310 55.000 0.00 0.00 40.84 4.84
2506 3308 1.747745 GGGGCGGTTTGATTAGCGT 60.748 57.895 0.00 0.00 40.84 5.07
2507 3309 2.478033 GGGGGCGGTTTGATTAGCG 61.478 63.158 0.00 0.00 41.61 4.26
2508 3310 3.521605 GGGGGCGGTTTGATTAGC 58.478 61.111 0.00 0.00 0.00 3.09
2522 3324 0.179045 CCACGCTAGAAATCAGGGGG 60.179 60.000 0.00 0.00 0.00 5.40
2523 3325 0.179045 CCCACGCTAGAAATCAGGGG 60.179 60.000 0.00 0.00 0.00 4.79
2524 3326 0.815615 GCCCACGCTAGAAATCAGGG 60.816 60.000 0.00 0.00 37.87 4.45
2525 3327 0.815615 GGCCCACGCTAGAAATCAGG 60.816 60.000 0.00 0.00 34.44 3.86
2526 3328 0.815615 GGGCCCACGCTAGAAATCAG 60.816 60.000 19.95 0.00 34.44 2.90
2527 3329 1.223487 GGGCCCACGCTAGAAATCA 59.777 57.895 19.95 0.00 34.44 2.57
2528 3330 1.887707 CGGGCCCACGCTAGAAATC 60.888 63.158 24.92 0.00 34.44 2.17
2529 3331 2.189521 CGGGCCCACGCTAGAAAT 59.810 61.111 24.92 0.00 34.44 2.17
2530 3332 3.315949 ACGGGCCCACGCTAGAAA 61.316 61.111 24.92 0.00 37.37 2.52
2531 3333 4.077184 CACGGGCCCACGCTAGAA 62.077 66.667 24.92 0.00 37.37 2.10
2543 3345 2.437716 ATTAGTTGGGCGCACGGG 60.438 61.111 10.83 0.00 0.00 5.28
2544 3346 1.743623 TCATTAGTTGGGCGCACGG 60.744 57.895 10.83 0.00 0.00 4.94
2545 3347 1.423845 GTCATTAGTTGGGCGCACG 59.576 57.895 10.83 0.00 0.00 5.34
2546 3348 1.017177 TCGTCATTAGTTGGGCGCAC 61.017 55.000 10.83 6.04 0.00 5.34
2547 3349 0.320858 TTCGTCATTAGTTGGGCGCA 60.321 50.000 10.83 0.00 0.00 6.09
2548 3350 1.014352 ATTCGTCATTAGTTGGGCGC 58.986 50.000 0.00 0.00 0.00 6.53
2549 3351 4.868450 TTAATTCGTCATTAGTTGGGCG 57.132 40.909 0.00 0.00 0.00 6.13
2550 3352 6.093633 AGTCTTTAATTCGTCATTAGTTGGGC 59.906 38.462 0.00 0.00 0.00 5.36
2551 3353 7.464358 CAGTCTTTAATTCGTCATTAGTTGGG 58.536 38.462 0.00 0.00 0.00 4.12
2552 3354 6.961554 GCAGTCTTTAATTCGTCATTAGTTGG 59.038 38.462 0.00 0.00 0.00 3.77
2553 3355 6.961554 GGCAGTCTTTAATTCGTCATTAGTTG 59.038 38.462 0.00 0.00 0.00 3.16
2554 3356 6.653320 TGGCAGTCTTTAATTCGTCATTAGTT 59.347 34.615 0.00 0.00 0.00 2.24
2555 3357 6.170506 TGGCAGTCTTTAATTCGTCATTAGT 58.829 36.000 0.00 0.00 0.00 2.24
2556 3358 6.662414 TGGCAGTCTTTAATTCGTCATTAG 57.338 37.500 0.00 0.00 0.00 1.73
2557 3359 7.441890 TTTGGCAGTCTTTAATTCGTCATTA 57.558 32.000 0.00 0.00 0.00 1.90
2558 3360 5.957842 TTGGCAGTCTTTAATTCGTCATT 57.042 34.783 0.00 0.00 0.00 2.57
2559 3361 5.957842 TTTGGCAGTCTTTAATTCGTCAT 57.042 34.783 0.00 0.00 0.00 3.06
2560 3362 5.471797 TGATTTGGCAGTCTTTAATTCGTCA 59.528 36.000 4.05 0.00 0.00 4.35
2561 3363 5.938322 TGATTTGGCAGTCTTTAATTCGTC 58.062 37.500 4.05 0.00 0.00 4.20
2562 3364 5.619981 GCTGATTTGGCAGTCTTTAATTCGT 60.620 40.000 0.00 0.00 38.17 3.85
2563 3365 4.795278 GCTGATTTGGCAGTCTTTAATTCG 59.205 41.667 0.00 0.00 38.17 3.34
2564 3366 5.713025 TGCTGATTTGGCAGTCTTTAATTC 58.287 37.500 0.00 0.00 38.17 2.17
2565 3367 5.726980 TGCTGATTTGGCAGTCTTTAATT 57.273 34.783 0.00 0.00 38.17 1.40
2566 3368 5.726980 TTGCTGATTTGGCAGTCTTTAAT 57.273 34.783 0.00 0.00 40.90 1.40
2567 3369 5.726980 ATTGCTGATTTGGCAGTCTTTAA 57.273 34.783 0.00 0.00 40.90 1.52
2568 3370 5.726980 AATTGCTGATTTGGCAGTCTTTA 57.273 34.783 0.00 0.00 40.90 1.85
2569 3371 4.612264 AATTGCTGATTTGGCAGTCTTT 57.388 36.364 0.00 0.00 40.90 2.52
2570 3372 4.379813 CGTAATTGCTGATTTGGCAGTCTT 60.380 41.667 0.00 0.00 40.90 3.01
2571 3373 3.127548 CGTAATTGCTGATTTGGCAGTCT 59.872 43.478 0.00 0.00 40.90 3.24
2572 3374 3.119849 ACGTAATTGCTGATTTGGCAGTC 60.120 43.478 0.00 0.00 40.90 3.51
2573 3375 2.819608 ACGTAATTGCTGATTTGGCAGT 59.180 40.909 0.00 0.00 40.90 4.40
2574 3376 3.492421 ACGTAATTGCTGATTTGGCAG 57.508 42.857 0.00 0.00 40.90 4.85
2575 3377 5.048364 ACTTTACGTAATTGCTGATTTGGCA 60.048 36.000 9.18 0.00 37.97 4.92
2576 3378 5.399013 ACTTTACGTAATTGCTGATTTGGC 58.601 37.500 9.18 0.00 0.00 4.52
2577 3379 6.681178 CGTACTTTACGTAATTGCTGATTTGG 59.319 38.462 9.18 0.00 46.41 3.28
2578 3380 7.630689 CGTACTTTACGTAATTGCTGATTTG 57.369 36.000 9.18 0.00 46.41 2.32
2593 3395 6.786207 ACGTAGGGATTCTTACGTACTTTAC 58.214 40.000 18.85 0.00 45.65 2.01
2594 3396 7.985184 TCTACGTAGGGATTCTTACGTACTTTA 59.015 37.037 21.04 6.31 45.65 1.85
2595 3397 5.904362 ACGTAGGGATTCTTACGTACTTT 57.096 39.130 18.85 0.00 45.65 2.66
2596 3398 6.349300 TCTACGTAGGGATTCTTACGTACTT 58.651 40.000 21.04 3.55 45.65 2.24
2597 3399 5.918608 TCTACGTAGGGATTCTTACGTACT 58.081 41.667 21.04 3.88 45.65 2.73
2598 3400 6.597614 CATCTACGTAGGGATTCTTACGTAC 58.402 44.000 21.04 1.22 45.65 3.67
2599 3401 5.180117 GCATCTACGTAGGGATTCTTACGTA 59.820 44.000 22.78 22.78 45.65 3.57
2601 3403 4.023450 TGCATCTACGTAGGGATTCTTACG 60.023 45.833 22.01 13.73 41.18 3.18
2602 3404 5.449107 TGCATCTACGTAGGGATTCTTAC 57.551 43.478 22.01 3.45 0.00 2.34
2603 3405 4.022242 GCTGCATCTACGTAGGGATTCTTA 60.022 45.833 22.01 0.68 0.00 2.10
2604 3406 3.243907 GCTGCATCTACGTAGGGATTCTT 60.244 47.826 22.01 0.00 0.00 2.52
2605 3407 2.297597 GCTGCATCTACGTAGGGATTCT 59.702 50.000 22.01 0.00 0.00 2.40
2606 3408 2.035961 TGCTGCATCTACGTAGGGATTC 59.964 50.000 22.01 5.26 0.00 2.52
2607 3409 2.039418 TGCTGCATCTACGTAGGGATT 58.961 47.619 22.01 2.92 0.00 3.01
2608 3410 1.704641 TGCTGCATCTACGTAGGGAT 58.295 50.000 22.01 7.11 0.00 3.85
2609 3411 1.704641 ATGCTGCATCTACGTAGGGA 58.295 50.000 22.01 7.55 0.00 4.20
2610 3412 2.533266 AATGCTGCATCTACGTAGGG 57.467 50.000 22.01 15.29 0.00 3.53
2611 3413 4.230657 GAGTAATGCTGCATCTACGTAGG 58.769 47.826 22.01 8.51 0.00 3.18
2612 3414 3.908978 CGAGTAATGCTGCATCTACGTAG 59.091 47.826 16.55 16.73 0.00 3.51
2613 3415 3.562557 TCGAGTAATGCTGCATCTACGTA 59.437 43.478 16.55 0.99 0.00 3.57
2614 3416 2.357952 TCGAGTAATGCTGCATCTACGT 59.642 45.455 16.55 2.06 0.00 3.57
2615 3417 3.000082 TCGAGTAATGCTGCATCTACG 58.000 47.619 16.55 17.50 0.00 3.51
2616 3418 6.153067 ACTAATCGAGTAATGCTGCATCTAC 58.847 40.000 16.55 17.96 36.27 2.59
2617 3419 6.332735 ACTAATCGAGTAATGCTGCATCTA 57.667 37.500 16.55 7.86 36.27 1.98
2618 3420 5.207110 ACTAATCGAGTAATGCTGCATCT 57.793 39.130 16.55 9.61 36.27 2.90
2619 3421 5.107298 GGAACTAATCGAGTAATGCTGCATC 60.107 44.000 16.55 4.31 37.44 3.91
2620 3422 4.752101 GGAACTAATCGAGTAATGCTGCAT 59.248 41.667 9.81 9.81 37.44 3.96
2621 3423 4.119862 GGAACTAATCGAGTAATGCTGCA 58.880 43.478 4.13 4.13 37.44 4.41
2622 3424 4.372656 AGGAACTAATCGAGTAATGCTGC 58.627 43.478 0.00 0.00 37.44 5.25
2623 3425 5.235186 CCAAGGAACTAATCGAGTAATGCTG 59.765 44.000 0.00 0.00 38.49 4.41
2624 3426 5.104900 ACCAAGGAACTAATCGAGTAATGCT 60.105 40.000 0.00 0.00 38.49 3.79
2625 3427 5.006746 CACCAAGGAACTAATCGAGTAATGC 59.993 44.000 0.00 0.00 38.49 3.56
2626 3428 5.006746 GCACCAAGGAACTAATCGAGTAATG 59.993 44.000 0.00 0.00 38.49 1.90
2627 3429 5.104900 AGCACCAAGGAACTAATCGAGTAAT 60.105 40.000 0.00 0.00 38.49 1.89
2628 3430 4.222145 AGCACCAAGGAACTAATCGAGTAA 59.778 41.667 0.00 0.00 38.49 2.24
2629 3431 3.767673 AGCACCAAGGAACTAATCGAGTA 59.232 43.478 0.00 0.00 38.49 2.59
2630 3432 2.567615 AGCACCAAGGAACTAATCGAGT 59.432 45.455 0.00 0.00 38.49 4.18
2631 3433 3.190874 GAGCACCAAGGAACTAATCGAG 58.809 50.000 0.00 0.00 38.49 4.04
2632 3434 2.093658 GGAGCACCAAGGAACTAATCGA 60.094 50.000 0.00 0.00 38.49 3.59
2633 3435 2.093447 AGGAGCACCAAGGAACTAATCG 60.093 50.000 2.07 0.00 38.49 3.34
2634 3436 3.055094 TGAGGAGCACCAAGGAACTAATC 60.055 47.826 2.07 0.00 38.49 1.75
2635 3437 2.912956 TGAGGAGCACCAAGGAACTAAT 59.087 45.455 2.07 0.00 38.49 1.73
2636 3438 2.038557 GTGAGGAGCACCAAGGAACTAA 59.961 50.000 2.07 0.00 38.90 2.24
2653 3455 1.734477 CCTTCAGTCACGCCGTGAG 60.734 63.158 21.90 10.29 43.57 3.51
2656 3458 2.035237 TTTCCCTTCAGTCACGCCGT 62.035 55.000 0.00 0.00 0.00 5.68
2658 3460 1.566018 CGTTTCCCTTCAGTCACGCC 61.566 60.000 0.00 0.00 0.00 5.68
2664 3466 0.182775 AACCAGCGTTTCCCTTCAGT 59.817 50.000 0.00 0.00 0.00 3.41
2666 3468 3.505835 AAACCAGCGTTTCCCTTCA 57.494 47.368 0.00 0.00 37.69 3.02
2673 3475 3.181487 GGCATCATATGAAACCAGCGTTT 60.181 43.478 18.08 0.00 44.99 3.60
2674 3476 2.358898 GGCATCATATGAAACCAGCGTT 59.641 45.455 18.08 0.00 0.00 4.84
2675 3477 1.949525 GGCATCATATGAAACCAGCGT 59.050 47.619 18.08 0.00 0.00 5.07
2678 3480 4.201657 TCTGTGGCATCATATGAAACCAG 58.798 43.478 23.51 17.27 34.89 4.00
2679 3481 4.233632 TCTGTGGCATCATATGAAACCA 57.766 40.909 20.59 20.59 32.71 3.67
2680 3482 4.641989 ACTTCTGTGGCATCATATGAAACC 59.358 41.667 9.99 14.14 0.00 3.27
2682 3484 6.487668 CCATACTTCTGTGGCATCATATGAAA 59.512 38.462 9.99 0.00 0.00 2.69
2683 3485 5.999600 CCATACTTCTGTGGCATCATATGAA 59.000 40.000 9.99 0.00 0.00 2.57
2684 3486 5.072193 ACCATACTTCTGTGGCATCATATGA 59.928 40.000 8.10 8.10 39.13 2.15
2685 3487 5.311265 ACCATACTTCTGTGGCATCATATG 58.689 41.667 0.00 0.00 39.13 1.78
2687 3489 6.686484 ATACCATACTTCTGTGGCATCATA 57.314 37.500 0.00 0.00 39.13 2.15
2688 3490 3.939740 ACCATACTTCTGTGGCATCAT 57.060 42.857 0.00 0.00 39.13 2.45
2689 3491 6.099701 AGTTATACCATACTTCTGTGGCATCA 59.900 38.462 0.00 0.00 39.13 3.07
2691 3493 6.464465 GGAGTTATACCATACTTCTGTGGCAT 60.464 42.308 0.00 0.00 39.13 4.40
2692 3494 5.163343 GGAGTTATACCATACTTCTGTGGCA 60.163 44.000 0.00 0.00 39.13 4.92
2693 3495 5.163343 TGGAGTTATACCATACTTCTGTGGC 60.163 44.000 0.00 0.00 39.13 5.01
2694 3496 6.479972 TGGAGTTATACCATACTTCTGTGG 57.520 41.667 0.00 0.00 41.35 4.17
2695 3497 6.986817 CCTTGGAGTTATACCATACTTCTGTG 59.013 42.308 0.00 0.00 37.26 3.66
2696 3498 6.901300 TCCTTGGAGTTATACCATACTTCTGT 59.099 38.462 0.00 0.00 37.26 3.41
2697 3499 7.361457 TCCTTGGAGTTATACCATACTTCTG 57.639 40.000 0.00 0.00 37.26 3.02
2698 3500 7.016661 CCATCCTTGGAGTTATACCATACTTCT 59.983 40.741 0.00 0.00 46.92 2.85
2699 3501 7.162082 CCATCCTTGGAGTTATACCATACTTC 58.838 42.308 0.00 0.00 46.92 3.01
2700 3502 7.079451 CCATCCTTGGAGTTATACCATACTT 57.921 40.000 0.00 0.00 46.92 2.24
2717 3519 3.906218 TGCTGATATAGTGCTCCATCCTT 59.094 43.478 0.00 0.00 0.00 3.36
2718 3520 3.514539 TGCTGATATAGTGCTCCATCCT 58.485 45.455 0.00 0.00 0.00 3.24
2720 3522 4.190001 CCATGCTGATATAGTGCTCCATC 58.810 47.826 0.00 0.00 0.00 3.51
2721 3523 3.586174 ACCATGCTGATATAGTGCTCCAT 59.414 43.478 0.00 0.00 0.00 3.41
2722 3524 2.974794 ACCATGCTGATATAGTGCTCCA 59.025 45.455 0.00 0.00 0.00 3.86
2726 4698 7.621428 AATATCAACCATGCTGATATAGTGC 57.379 36.000 20.41 0.00 35.21 4.40
2735 4707 3.117794 CGCCAAAATATCAACCATGCTG 58.882 45.455 0.00 0.00 0.00 4.41
2737 4709 3.066621 TCTCGCCAAAATATCAACCATGC 59.933 43.478 0.00 0.00 0.00 4.06
2739 4711 3.885297 CCTCTCGCCAAAATATCAACCAT 59.115 43.478 0.00 0.00 0.00 3.55
2741 4713 2.618709 CCCTCTCGCCAAAATATCAACC 59.381 50.000 0.00 0.00 0.00 3.77
2742 4714 2.618709 CCCCTCTCGCCAAAATATCAAC 59.381 50.000 0.00 0.00 0.00 3.18
2745 4717 1.143073 ACCCCCTCTCGCCAAAATATC 59.857 52.381 0.00 0.00 0.00 1.63
2746 4718 1.222567 ACCCCCTCTCGCCAAAATAT 58.777 50.000 0.00 0.00 0.00 1.28
2751 4723 1.764854 GGATACCCCCTCTCGCCAA 60.765 63.158 0.00 0.00 0.00 4.52
2752 4724 2.122989 GGATACCCCCTCTCGCCA 60.123 66.667 0.00 0.00 0.00 5.69
2753 4725 2.122989 TGGATACCCCCTCTCGCC 60.123 66.667 0.00 0.00 0.00 5.54
2755 4727 1.182385 GCTCTGGATACCCCCTCTCG 61.182 65.000 0.00 0.00 0.00 4.04
2757 4729 0.570218 ATGCTCTGGATACCCCCTCT 59.430 55.000 0.00 0.00 0.00 3.69
2758 4730 0.689623 CATGCTCTGGATACCCCCTC 59.310 60.000 0.00 0.00 0.00 4.30
2759 4731 1.422161 GCATGCTCTGGATACCCCCT 61.422 60.000 11.37 0.00 0.00 4.79
2760 4732 1.073897 GCATGCTCTGGATACCCCC 59.926 63.158 11.37 0.00 0.00 5.40
2761 4733 1.302033 CGCATGCTCTGGATACCCC 60.302 63.158 17.13 0.00 0.00 4.95
2762 4734 0.106708 TTCGCATGCTCTGGATACCC 59.893 55.000 17.13 0.00 0.00 3.69
2763 4735 1.802960 CATTCGCATGCTCTGGATACC 59.197 52.381 17.13 0.00 0.00 2.73
2764 4736 2.759191 TCATTCGCATGCTCTGGATAC 58.241 47.619 17.13 0.00 0.00 2.24
2767 4739 2.011947 CTTTCATTCGCATGCTCTGGA 58.988 47.619 17.13 2.09 0.00 3.86
2768 4740 1.533338 GCTTTCATTCGCATGCTCTGG 60.533 52.381 17.13 0.00 0.00 3.86
2770 4742 1.400846 CTGCTTTCATTCGCATGCTCT 59.599 47.619 17.13 0.00 35.32 4.09
2771 4743 1.399440 TCTGCTTTCATTCGCATGCTC 59.601 47.619 17.13 0.00 35.32 4.26
2772 4744 1.131883 GTCTGCTTTCATTCGCATGCT 59.868 47.619 17.13 0.00 35.32 3.79
2773 4745 1.542544 GTCTGCTTTCATTCGCATGC 58.457 50.000 7.91 7.91 35.32 4.06
2774 4746 1.129251 ACGTCTGCTTTCATTCGCATG 59.871 47.619 0.00 0.00 35.32 4.06
2775 4747 1.442769 ACGTCTGCTTTCATTCGCAT 58.557 45.000 0.00 0.00 35.32 4.73
2777 4749 1.783416 CGAACGTCTGCTTTCATTCGC 60.783 52.381 0.00 0.00 33.42 4.70
2778 4750 1.455786 ACGAACGTCTGCTTTCATTCG 59.544 47.619 10.14 10.14 43.35 3.34
2779 4751 2.221055 ACACGAACGTCTGCTTTCATTC 59.779 45.455 0.00 0.00 0.00 2.67
2780 4752 2.210116 ACACGAACGTCTGCTTTCATT 58.790 42.857 0.00 0.00 0.00 2.57
2781 4753 1.865865 ACACGAACGTCTGCTTTCAT 58.134 45.000 0.00 0.00 0.00 2.57
2782 4754 2.495409 TACACGAACGTCTGCTTTCA 57.505 45.000 0.00 0.00 0.00 2.69
2783 4755 2.092211 CCATACACGAACGTCTGCTTTC 59.908 50.000 0.00 0.00 0.00 2.62
2784 4756 2.066262 CCATACACGAACGTCTGCTTT 58.934 47.619 0.00 0.00 0.00 3.51
2785 4757 1.671850 CCCATACACGAACGTCTGCTT 60.672 52.381 0.00 0.00 0.00 3.91
2786 4758 0.108804 CCCATACACGAACGTCTGCT 60.109 55.000 0.00 0.00 0.00 4.24
2787 4759 1.082117 CCCCATACACGAACGTCTGC 61.082 60.000 0.00 0.00 0.00 4.26
2788 4760 0.528924 TCCCCATACACGAACGTCTG 59.471 55.000 0.00 0.00 0.00 3.51
2789 4761 0.815734 CTCCCCATACACGAACGTCT 59.184 55.000 0.00 0.00 0.00 4.18
2790 4762 0.804933 GCTCCCCATACACGAACGTC 60.805 60.000 0.00 0.00 0.00 4.34
2791 4763 1.217244 GCTCCCCATACACGAACGT 59.783 57.895 0.00 0.00 0.00 3.99
2792 4764 0.108329 AAGCTCCCCATACACGAACG 60.108 55.000 0.00 0.00 0.00 3.95
2793 4765 1.737793 CAAAGCTCCCCATACACGAAC 59.262 52.381 0.00 0.00 0.00 3.95
2794 4766 1.948611 GCAAAGCTCCCCATACACGAA 60.949 52.381 0.00 0.00 0.00 3.85
2795 4767 0.392461 GCAAAGCTCCCCATACACGA 60.392 55.000 0.00 0.00 0.00 4.35
2796 4768 0.392998 AGCAAAGCTCCCCATACACG 60.393 55.000 0.00 0.00 30.62 4.49
2797 4769 1.474077 CAAGCAAAGCTCCCCATACAC 59.526 52.381 0.00 0.00 38.25 2.90
2798 4770 1.838112 CAAGCAAAGCTCCCCATACA 58.162 50.000 0.00 0.00 38.25 2.29
2799 4771 0.457443 GCAAGCAAAGCTCCCCATAC 59.543 55.000 0.00 0.00 38.25 2.39
2800 4772 0.039472 TGCAAGCAAAGCTCCCCATA 59.961 50.000 0.00 0.00 38.25 2.74
2801 4773 1.228956 TGCAAGCAAAGCTCCCCAT 60.229 52.632 0.00 0.00 38.25 4.00
2802 4774 1.904865 CTGCAAGCAAAGCTCCCCA 60.905 57.895 0.00 0.00 38.25 4.96
2803 4775 2.968206 CTGCAAGCAAAGCTCCCC 59.032 61.111 0.00 0.00 38.25 4.81
2817 4789 1.312371 TTATGAACCCGGCAAGCTGC 61.312 55.000 0.00 0.00 44.08 5.25
2818 4790 0.734889 CTTATGAACCCGGCAAGCTG 59.265 55.000 0.00 0.00 0.00 4.24
2819 4791 0.618458 TCTTATGAACCCGGCAAGCT 59.382 50.000 0.00 0.00 0.00 3.74
2820 4792 1.132453 GTTCTTATGAACCCGGCAAGC 59.868 52.381 9.76 0.00 44.93 4.01
2830 4802 7.628366 GCTTTCCCAAATCGATGTTCTTATGAA 60.628 37.037 0.00 0.00 0.00 2.57
2831 4803 6.183360 GCTTTCCCAAATCGATGTTCTTATGA 60.183 38.462 0.00 0.00 0.00 2.15
2832 4804 5.973565 GCTTTCCCAAATCGATGTTCTTATG 59.026 40.000 0.00 0.00 0.00 1.90
2833 4805 5.652014 TGCTTTCCCAAATCGATGTTCTTAT 59.348 36.000 0.00 0.00 0.00 1.73
2834 4806 5.007034 TGCTTTCCCAAATCGATGTTCTTA 58.993 37.500 0.00 0.00 0.00 2.10
2835 4807 3.826157 TGCTTTCCCAAATCGATGTTCTT 59.174 39.130 0.00 0.00 0.00 2.52
2836 4808 3.420893 TGCTTTCCCAAATCGATGTTCT 58.579 40.909 0.00 0.00 0.00 3.01
2837 4809 3.848272 TGCTTTCCCAAATCGATGTTC 57.152 42.857 0.00 0.00 0.00 3.18
2838 4810 3.573967 AGTTGCTTTCCCAAATCGATGTT 59.426 39.130 0.00 0.00 0.00 2.71
2839 4811 3.057315 CAGTTGCTTTCCCAAATCGATGT 60.057 43.478 0.00 0.00 0.00 3.06
2840 4812 3.504863 CAGTTGCTTTCCCAAATCGATG 58.495 45.455 0.00 0.00 0.00 3.84
2841 4813 2.493278 CCAGTTGCTTTCCCAAATCGAT 59.507 45.455 0.00 0.00 0.00 3.59
2842 4814 1.885887 CCAGTTGCTTTCCCAAATCGA 59.114 47.619 0.00 0.00 0.00 3.59
2843 4815 1.669795 GCCAGTTGCTTTCCCAAATCG 60.670 52.381 0.00 0.00 36.87 3.34
2844 4816 2.084610 GCCAGTTGCTTTCCCAAATC 57.915 50.000 0.00 0.00 36.87 2.17
2855 4827 4.708177 TCTTCATAATCCTAGCCAGTTGC 58.292 43.478 0.00 0.00 41.71 4.17
2856 4828 6.825721 AGTTTCTTCATAATCCTAGCCAGTTG 59.174 38.462 0.00 0.00 0.00 3.16
2857 4829 6.963322 AGTTTCTTCATAATCCTAGCCAGTT 58.037 36.000 0.00 0.00 0.00 3.16
2858 4830 6.567602 AGTTTCTTCATAATCCTAGCCAGT 57.432 37.500 0.00 0.00 0.00 4.00
2859 4831 7.015682 TCCTAGTTTCTTCATAATCCTAGCCAG 59.984 40.741 0.00 0.00 0.00 4.85
2860 4832 6.844388 TCCTAGTTTCTTCATAATCCTAGCCA 59.156 38.462 0.00 0.00 0.00 4.75
2861 4833 7.156000 GTCCTAGTTTCTTCATAATCCTAGCC 58.844 42.308 0.00 0.00 0.00 3.93
2862 4834 7.727181 TGTCCTAGTTTCTTCATAATCCTAGC 58.273 38.462 0.00 0.00 0.00 3.42
2863 4835 9.703892 CATGTCCTAGTTTCTTCATAATCCTAG 57.296 37.037 0.00 0.00 0.00 3.02
2864 4836 9.434275 TCATGTCCTAGTTTCTTCATAATCCTA 57.566 33.333 0.00 0.00 0.00 2.94
2866 5749 7.659390 CCTCATGTCCTAGTTTCTTCATAATCC 59.341 40.741 0.00 0.00 0.00 3.01
2868 5751 7.420680 CCCCTCATGTCCTAGTTTCTTCATAAT 60.421 40.741 0.00 0.00 0.00 1.28
2871 5754 4.164988 CCCCTCATGTCCTAGTTTCTTCAT 59.835 45.833 0.00 0.00 0.00 2.57
2878 5761 2.472029 CAGTCCCCTCATGTCCTAGTT 58.528 52.381 0.00 0.00 0.00 2.24
2880 5763 1.418334 CCAGTCCCCTCATGTCCTAG 58.582 60.000 0.00 0.00 0.00 3.02
2882 5765 1.997874 GCCAGTCCCCTCATGTCCT 60.998 63.158 0.00 0.00 0.00 3.85
2887 5770 0.779997 AAAGTTGCCAGTCCCCTCAT 59.220 50.000 0.00 0.00 0.00 2.90
2888 5771 0.178992 CAAAGTTGCCAGTCCCCTCA 60.179 55.000 0.00 0.00 0.00 3.86
2890 5773 0.261696 AACAAAGTTGCCAGTCCCCT 59.738 50.000 0.00 0.00 0.00 4.79
2893 5776 1.269257 GCAGAACAAAGTTGCCAGTCC 60.269 52.381 0.00 0.00 31.79 3.85
2894 5777 1.678101 AGCAGAACAAAGTTGCCAGTC 59.322 47.619 0.00 0.00 38.58 3.51
2895 5778 1.406539 CAGCAGAACAAAGTTGCCAGT 59.593 47.619 0.00 0.00 38.58 4.00
2896 5779 1.406539 ACAGCAGAACAAAGTTGCCAG 59.593 47.619 0.00 0.00 38.58 4.85
2899 5782 1.405105 TGGACAGCAGAACAAAGTTGC 59.595 47.619 0.00 0.00 38.09 4.17
2900 5783 3.119531 TGTTGGACAGCAGAACAAAGTTG 60.120 43.478 0.00 0.00 0.00 3.16
2901 5784 3.088532 TGTTGGACAGCAGAACAAAGTT 58.911 40.909 0.00 0.00 0.00 2.66
2902 5785 2.722094 TGTTGGACAGCAGAACAAAGT 58.278 42.857 0.00 0.00 0.00 2.66
2903 5786 3.996150 ATGTTGGACAGCAGAACAAAG 57.004 42.857 0.00 0.00 33.50 2.77
2905 5788 5.069318 TGAATATGTTGGACAGCAGAACAA 58.931 37.500 0.00 0.00 33.50 2.83
2906 5789 4.650734 TGAATATGTTGGACAGCAGAACA 58.349 39.130 0.00 0.00 34.25 3.18
2907 5790 4.697352 ACTGAATATGTTGGACAGCAGAAC 59.303 41.667 0.00 0.00 32.67 3.01
2909 5792 4.256110 CACTGAATATGTTGGACAGCAGA 58.744 43.478 0.00 0.00 32.67 4.26
2910 5793 3.181503 GCACTGAATATGTTGGACAGCAG 60.182 47.826 0.00 0.00 32.67 4.24
2911 5794 2.749076 GCACTGAATATGTTGGACAGCA 59.251 45.455 0.00 0.00 32.67 4.41
2912 5795 2.098117 GGCACTGAATATGTTGGACAGC 59.902 50.000 0.00 0.00 32.67 4.40
2913 5796 2.352651 CGGCACTGAATATGTTGGACAG 59.647 50.000 0.00 0.00 35.14 3.51
2914 5797 2.355197 CGGCACTGAATATGTTGGACA 58.645 47.619 0.00 0.00 0.00 4.02
2915 5798 1.064060 GCGGCACTGAATATGTTGGAC 59.936 52.381 0.00 0.00 0.00 4.02
2917 5800 1.382522 AGCGGCACTGAATATGTTGG 58.617 50.000 1.45 0.00 0.00 3.77
2928 5811 4.021925 GAACCTCCCAGCGGCACT 62.022 66.667 1.45 0.00 0.00 4.40
2933 5816 1.227089 CTCATCGAACCTCCCAGCG 60.227 63.158 0.00 0.00 0.00 5.18
2936 5819 1.612146 TGCCTCATCGAACCTCCCA 60.612 57.895 0.00 0.00 0.00 4.37
2937 5820 1.144936 CTGCCTCATCGAACCTCCC 59.855 63.158 0.00 0.00 0.00 4.30
2939 5822 2.025155 TCTACTGCCTCATCGAACCTC 58.975 52.381 0.00 0.00 0.00 3.85
2940 5823 2.145397 TCTACTGCCTCATCGAACCT 57.855 50.000 0.00 0.00 0.00 3.50
2941 5824 2.166664 ACTTCTACTGCCTCATCGAACC 59.833 50.000 0.00 0.00 0.00 3.62
2944 5827 2.097629 CGAACTTCTACTGCCTCATCGA 59.902 50.000 0.00 0.00 0.00 3.59
2946 5829 3.784701 TCGAACTTCTACTGCCTCATC 57.215 47.619 0.00 0.00 0.00 2.92
2947 5830 4.744795 ATTCGAACTTCTACTGCCTCAT 57.255 40.909 0.00 0.00 0.00 2.90
2948 5831 5.654603 TTATTCGAACTTCTACTGCCTCA 57.345 39.130 0.00 0.00 0.00 3.86
2949 5832 7.201145 TGTATTATTCGAACTTCTACTGCCTC 58.799 38.462 0.00 0.00 0.00 4.70
2950 5833 7.068348 TCTGTATTATTCGAACTTCTACTGCCT 59.932 37.037 0.00 0.00 0.00 4.75
2951 5834 7.201145 TCTGTATTATTCGAACTTCTACTGCC 58.799 38.462 0.00 0.00 0.00 4.85
2952 5835 8.630278 TTCTGTATTATTCGAACTTCTACTGC 57.370 34.615 0.00 0.00 0.00 4.40
2953 5836 9.239002 CCTTCTGTATTATTCGAACTTCTACTG 57.761 37.037 0.00 5.02 0.00 2.74
2954 5837 9.186837 TCCTTCTGTATTATTCGAACTTCTACT 57.813 33.333 0.00 0.00 0.00 2.57
2955 5838 9.453325 CTCCTTCTGTATTATTCGAACTTCTAC 57.547 37.037 0.00 1.20 0.00 2.59
2956 5839 9.404848 TCTCCTTCTGTATTATTCGAACTTCTA 57.595 33.333 0.00 0.00 0.00 2.10
2957 5840 8.294954 TCTCCTTCTGTATTATTCGAACTTCT 57.705 34.615 0.00 0.00 0.00 2.85
2960 5843 7.418025 CCCTTCTCCTTCTGTATTATTCGAACT 60.418 40.741 0.00 0.00 0.00 3.01
2961 5844 6.702282 CCCTTCTCCTTCTGTATTATTCGAAC 59.298 42.308 0.00 0.00 0.00 3.95
2962 5845 6.183360 CCCCTTCTCCTTCTGTATTATTCGAA 60.183 42.308 0.00 0.00 0.00 3.71
2963 5846 5.304614 CCCCTTCTCCTTCTGTATTATTCGA 59.695 44.000 0.00 0.00 0.00 3.71
2964 5847 5.070580 ACCCCTTCTCCTTCTGTATTATTCG 59.929 44.000 0.00 0.00 0.00 3.34
2965 5848 6.502074 ACCCCTTCTCCTTCTGTATTATTC 57.498 41.667 0.00 0.00 0.00 1.75
2966 5849 6.447084 TGAACCCCTTCTCCTTCTGTATTATT 59.553 38.462 0.00 0.00 0.00 1.40
2967 5850 5.970640 TGAACCCCTTCTCCTTCTGTATTAT 59.029 40.000 0.00 0.00 0.00 1.28
2969 5852 4.175962 TGAACCCCTTCTCCTTCTGTATT 58.824 43.478 0.00 0.00 0.00 1.89
2970 5853 3.803340 TGAACCCCTTCTCCTTCTGTAT 58.197 45.455 0.00 0.00 0.00 2.29
2971 5854 3.269592 TGAACCCCTTCTCCTTCTGTA 57.730 47.619 0.00 0.00 0.00 2.74
2972 5855 2.118403 TGAACCCCTTCTCCTTCTGT 57.882 50.000 0.00 0.00 0.00 3.41
2973 5856 2.639839 TCTTGAACCCCTTCTCCTTCTG 59.360 50.000 0.00 0.00 0.00 3.02
2974 5857 2.991580 TCTTGAACCCCTTCTCCTTCT 58.008 47.619 0.00 0.00 0.00 2.85
2976 5859 3.327439 TCTTCTTGAACCCCTTCTCCTT 58.673 45.455 0.00 0.00 0.00 3.36
2977 5860 2.909662 CTCTTCTTGAACCCCTTCTCCT 59.090 50.000 0.00 0.00 0.00 3.69
2978 5861 2.616765 GCTCTTCTTGAACCCCTTCTCC 60.617 54.545 0.00 0.00 0.00 3.71
2979 5862 2.616765 GGCTCTTCTTGAACCCCTTCTC 60.617 54.545 0.00 0.00 0.00 2.87
2980 5863 1.352687 GGCTCTTCTTGAACCCCTTCT 59.647 52.381 0.00 0.00 0.00 2.85
2981 5864 1.614583 GGGCTCTTCTTGAACCCCTTC 60.615 57.143 0.00 0.00 43.64 3.46
2984 5867 4.745116 GGGCTCTTCTTGAACCCC 57.255 61.111 0.00 0.00 43.64 4.95
2986 5869 0.962855 GCCAGGGCTCTTCTTGAACC 60.963 60.000 2.30 0.00 38.26 3.62
2987 5870 2.560954 GCCAGGGCTCTTCTTGAAC 58.439 57.895 2.30 0.00 38.26 3.18
2998 5881 3.951769 ATCCAACTGCAGCCAGGGC 62.952 63.158 15.27 0.97 43.53 5.19
2999 5882 2.050350 CATCCAACTGCAGCCAGGG 61.050 63.158 15.27 10.37 43.53 4.45
3000 5883 1.303888 ACATCCAACTGCAGCCAGG 60.304 57.895 15.27 13.43 43.53 4.45
3001 5884 0.322277 AGACATCCAACTGCAGCCAG 60.322 55.000 15.27 3.42 44.80 4.85
3004 5887 2.093764 ACTCTAGACATCCAACTGCAGC 60.094 50.000 15.27 0.00 0.00 5.25
3005 5888 3.446873 AGACTCTAGACATCCAACTGCAG 59.553 47.826 13.48 13.48 0.00 4.41
3008 5891 3.766591 ACCAGACTCTAGACATCCAACTG 59.233 47.826 0.00 0.00 0.00 3.16
3009 5892 4.054359 ACCAGACTCTAGACATCCAACT 57.946 45.455 0.00 0.00 0.00 3.16
3010 5893 4.220821 TGAACCAGACTCTAGACATCCAAC 59.779 45.833 0.00 0.00 0.00 3.77
3011 5894 4.416516 TGAACCAGACTCTAGACATCCAA 58.583 43.478 0.00 0.00 0.00 3.53
3012 5895 4.047627 TGAACCAGACTCTAGACATCCA 57.952 45.455 0.00 0.00 0.00 3.41
3013 5896 4.646945 TCATGAACCAGACTCTAGACATCC 59.353 45.833 0.00 0.00 0.00 3.51
3014 5897 5.587289 GTCATGAACCAGACTCTAGACATC 58.413 45.833 0.00 0.00 0.00 3.06
3015 5898 5.590530 GTCATGAACCAGACTCTAGACAT 57.409 43.478 0.00 0.00 0.00 3.06
3029 5912 5.059833 AGACAAAACTGAGAGGTCATGAAC 58.940 41.667 1.26 1.26 30.18 3.18
3030 5913 5.296151 AGACAAAACTGAGAGGTCATGAA 57.704 39.130 0.00 0.00 30.18 2.57
3032 5915 8.954950 ATATAAGACAAAACTGAGAGGTCATG 57.045 34.615 0.00 0.00 30.18 3.07
3033 5916 8.762645 TGATATAAGACAAAACTGAGAGGTCAT 58.237 33.333 0.00 0.00 30.18 3.06
3034 5917 8.134202 TGATATAAGACAAAACTGAGAGGTCA 57.866 34.615 0.00 0.00 0.00 4.02
3035 5918 8.254508 ACTGATATAAGACAAAACTGAGAGGTC 58.745 37.037 0.00 0.00 0.00 3.85
3036 5919 8.140112 ACTGATATAAGACAAAACTGAGAGGT 57.860 34.615 0.00 0.00 0.00 3.85
3037 5920 8.253810 TGACTGATATAAGACAAAACTGAGAGG 58.746 37.037 0.00 0.00 0.00 3.69
3038 5921 9.814899 ATGACTGATATAAGACAAAACTGAGAG 57.185 33.333 0.00 0.00 0.00 3.20
3041 5924 9.942850 TGAATGACTGATATAAGACAAAACTGA 57.057 29.630 0.00 0.00 0.00 3.41
3043 5926 8.887717 GCTGAATGACTGATATAAGACAAAACT 58.112 33.333 0.00 0.00 0.00 2.66
3044 5927 8.887717 AGCTGAATGACTGATATAAGACAAAAC 58.112 33.333 0.00 0.00 0.00 2.43
3045 5928 9.453572 AAGCTGAATGACTGATATAAGACAAAA 57.546 29.630 0.00 0.00 0.00 2.44
3046 5929 8.886719 CAAGCTGAATGACTGATATAAGACAAA 58.113 33.333 0.00 0.00 0.00 2.83
3048 5931 6.481313 GCAAGCTGAATGACTGATATAAGACA 59.519 38.462 0.00 0.00 0.00 3.41
3049 5932 6.481313 TGCAAGCTGAATGACTGATATAAGAC 59.519 38.462 0.00 0.00 0.00 3.01
3050 5933 6.585416 TGCAAGCTGAATGACTGATATAAGA 58.415 36.000 0.00 0.00 0.00 2.10
3051 5934 6.856135 TGCAAGCTGAATGACTGATATAAG 57.144 37.500 0.00 0.00 0.00 1.73
3052 5935 6.769341 ACATGCAAGCTGAATGACTGATATAA 59.231 34.615 10.14 0.00 35.34 0.98
3054 5937 5.131067 ACATGCAAGCTGAATGACTGATAT 58.869 37.500 10.14 0.00 35.34 1.63
3056 5939 3.353557 ACATGCAAGCTGAATGACTGAT 58.646 40.909 10.14 0.00 35.34 2.90
3057 5940 2.745821 GACATGCAAGCTGAATGACTGA 59.254 45.455 10.14 0.00 35.34 3.41
3059 5942 3.069079 AGACATGCAAGCTGAATGACT 57.931 42.857 10.14 7.06 35.34 3.41
3060 5943 3.189910 TCAAGACATGCAAGCTGAATGAC 59.810 43.478 10.14 5.24 35.34 3.06
3062 5945 3.842732 TCAAGACATGCAAGCTGAATG 57.157 42.857 0.00 0.00 39.36 2.67
3063 5946 3.570975 TGTTCAAGACATGCAAGCTGAAT 59.429 39.130 0.00 0.00 32.00 2.57
3064 5947 2.950975 TGTTCAAGACATGCAAGCTGAA 59.049 40.909 0.00 0.00 32.00 3.02
3065 5948 2.551032 CTGTTCAAGACATGCAAGCTGA 59.449 45.455 0.00 0.00 37.69 4.26
3067 5950 1.268899 GCTGTTCAAGACATGCAAGCT 59.731 47.619 0.00 0.00 37.69 3.74
3068 5951 1.694639 GCTGTTCAAGACATGCAAGC 58.305 50.000 0.00 0.00 37.69 4.01
3069 5952 1.400629 CCGCTGTTCAAGACATGCAAG 60.401 52.381 0.00 0.00 37.69 4.01
3070 5953 0.592637 CCGCTGTTCAAGACATGCAA 59.407 50.000 0.00 0.00 37.69 4.08
3071 5954 0.250252 TCCGCTGTTCAAGACATGCA 60.250 50.000 0.00 0.00 37.69 3.96
3073 5956 0.445436 GCTCCGCTGTTCAAGACATG 59.555 55.000 0.00 0.00 37.69 3.21
3075 5958 0.035317 ATGCTCCGCTGTTCAAGACA 59.965 50.000 0.00 0.00 36.65 3.41
3076 5959 1.160137 AATGCTCCGCTGTTCAAGAC 58.840 50.000 0.00 0.00 0.00 3.01
3077 5960 1.896220 AAATGCTCCGCTGTTCAAGA 58.104 45.000 0.00 0.00 0.00 3.02
3078 5961 2.096496 CCTAAATGCTCCGCTGTTCAAG 59.904 50.000 0.00 0.00 0.00 3.02
3079 5962 2.083774 CCTAAATGCTCCGCTGTTCAA 58.916 47.619 0.00 0.00 0.00 2.69
3080 5963 1.678728 CCCTAAATGCTCCGCTGTTCA 60.679 52.381 0.00 0.00 0.00 3.18
3081 5964 1.017387 CCCTAAATGCTCCGCTGTTC 58.983 55.000 0.00 0.00 0.00 3.18
3082 5965 1.032114 GCCCTAAATGCTCCGCTGTT 61.032 55.000 0.00 0.00 0.00 3.16
3084 5967 0.820891 ATGCCCTAAATGCTCCGCTG 60.821 55.000 0.00 0.00 0.00 5.18
3085 5968 0.820891 CATGCCCTAAATGCTCCGCT 60.821 55.000 0.00 0.00 0.00 5.52
3087 5970 1.799258 GCCATGCCCTAAATGCTCCG 61.799 60.000 0.00 0.00 0.00 4.63
3088 5971 1.466851 GGCCATGCCCTAAATGCTCC 61.467 60.000 0.00 0.00 44.06 4.70
3089 5972 2.044452 GGCCATGCCCTAAATGCTC 58.956 57.895 0.00 0.00 44.06 4.26
3101 5984 1.669440 GGGCTATGCATTGGCCATG 59.331 57.895 36.79 8.63 46.87 3.66
3104 5987 2.123338 TGGGGCTATGCATTGGCC 60.123 61.111 35.14 35.14 45.04 5.36
3105 5988 2.205152 CCTGGGGCTATGCATTGGC 61.205 63.158 23.20 23.20 41.68 4.52
3106 5989 1.532316 CCCTGGGGCTATGCATTGG 60.532 63.158 3.54 0.00 0.00 3.16
3107 5990 1.111116 CACCCTGGGGCTATGCATTG 61.111 60.000 18.88 3.55 39.32 2.82
3108 5991 1.231068 CACCCTGGGGCTATGCATT 59.769 57.895 18.88 0.00 39.32 3.56
3109 5992 1.070127 ATCACCCTGGGGCTATGCAT 61.070 55.000 18.88 3.79 39.32 3.96
3110 5993 1.697394 ATCACCCTGGGGCTATGCA 60.697 57.895 18.88 0.00 39.32 3.96
3111 5994 1.228367 CATCACCCTGGGGCTATGC 60.228 63.158 18.88 0.00 39.32 3.14
3112 5995 0.109342 GACATCACCCTGGGGCTATG 59.891 60.000 18.88 18.11 39.32 2.23
3115 5998 1.997874 GAGACATCACCCTGGGGCT 60.998 63.158 18.88 4.03 39.32 5.19
3116 5999 2.592308 GAGACATCACCCTGGGGC 59.408 66.667 18.88 0.00 39.32 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.