Multiple sequence alignment - TraesCS2D01G051600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G051600 chr2D 100.000 3662 0 0 1 3662 19579696 19583357 0.000000e+00 6763.0
1 TraesCS2D01G051600 chr2D 77.563 2643 492 64 9 2615 10096394 10098971 0.000000e+00 1502.0
2 TraesCS2D01G051600 chr2D 77.450 2439 461 58 207 2612 36435775 36433393 0.000000e+00 1375.0
3 TraesCS2D01G051600 chr2D 78.623 2077 397 40 566 2614 19462186 19464243 0.000000e+00 1332.0
4 TraesCS2D01G051600 chr2D 77.442 2252 435 55 406 2615 10025070 10022850 0.000000e+00 1277.0
5 TraesCS2D01G051600 chr2D 89.535 172 18 0 3479 3650 19467263 19467434 6.160000e-53 219.0
6 TraesCS2D01G051600 chr2D 97.436 39 1 0 29 67 10027131 10027093 2.360000e-07 67.6
7 TraesCS2D01G051600 chr2B 95.345 2771 113 6 3 2767 31424634 31421874 0.000000e+00 4388.0
8 TraesCS2D01G051600 chr2B 77.623 2650 505 62 7 2615 13495437 13492835 0.000000e+00 1528.0
9 TraesCS2D01G051600 chr2B 75.167 1349 296 29 1291 2615 13735868 13737201 1.880000e-167 599.0
10 TraesCS2D01G051600 chr2B 79.889 721 125 16 398 1106 13734923 13735635 9.070000e-141 510.0
11 TraesCS2D01G051600 chr2B 76.566 495 109 5 1753 2245 13433593 13433104 7.800000e-67 265.0
12 TraesCS2D01G051600 chr2B 85.789 190 20 5 5 188 13718969 13719157 1.040000e-45 195.0
13 TraesCS2D01G051600 chr2B 93.220 59 4 0 1184 1242 13433762 13433704 1.810000e-13 87.9
14 TraesCS2D01G051600 chr2A 78.822 2649 488 55 9 2615 10197776 10200393 0.000000e+00 1716.0
15 TraesCS2D01G051600 chr2A 77.090 2440 474 62 207 2612 40342646 40340258 0.000000e+00 1330.0
16 TraesCS2D01G051600 chr2A 77.723 2222 433 53 425 2614 20502486 20504677 0.000000e+00 1304.0
17 TraesCS2D01G051600 chr2A 78.057 1873 349 47 207 2057 9776942 9778774 0.000000e+00 1125.0
18 TraesCS2D01G051600 chr2A 78.959 884 169 13 425 1299 10383881 10383006 1.470000e-163 586.0
19 TraesCS2D01G051600 chr2A 75.654 1261 258 30 1325 2577 10374567 10375786 1.900000e-162 582.0
20 TraesCS2D01G051600 chr2A 79.447 832 137 24 288 1105 10373527 10374338 3.190000e-155 558.0
21 TraesCS2D01G051600 chr2A 78.161 870 169 14 1182 2046 9201955 9201102 5.380000e-148 534.0
22 TraesCS2D01G051600 chr2A 75.478 628 127 20 1994 2612 10382939 10382330 7.740000e-72 281.0
23 TraesCS2D01G051600 chr2A 74.404 629 132 23 1994 2612 9200954 9200345 3.650000e-60 243.0
24 TraesCS2D01G051600 chr2A 85.870 184 24 1 3479 3662 20510393 20510574 1.040000e-45 195.0
25 TraesCS2D01G051600 chr7B 77.333 150 30 4 833 980 710434082 710433935 6.520000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G051600 chr2D 19579696 19583357 3661 False 6763.0 6763 100.0000 1 3662 1 chr2D.!!$F2 3661
1 TraesCS2D01G051600 chr2D 10096394 10098971 2577 False 1502.0 1502 77.5630 9 2615 1 chr2D.!!$F1 2606
2 TraesCS2D01G051600 chr2D 36433393 36435775 2382 True 1375.0 1375 77.4500 207 2612 1 chr2D.!!$R1 2405
3 TraesCS2D01G051600 chr2D 19462186 19467434 5248 False 775.5 1332 84.0790 566 3650 2 chr2D.!!$F3 3084
4 TraesCS2D01G051600 chr2D 10022850 10027131 4281 True 672.3 1277 87.4390 29 2615 2 chr2D.!!$R2 2586
5 TraesCS2D01G051600 chr2B 31421874 31424634 2760 True 4388.0 4388 95.3450 3 2767 1 chr2B.!!$R2 2764
6 TraesCS2D01G051600 chr2B 13492835 13495437 2602 True 1528.0 1528 77.6230 7 2615 1 chr2B.!!$R1 2608
7 TraesCS2D01G051600 chr2B 13734923 13737201 2278 False 554.5 599 77.5280 398 2615 2 chr2B.!!$F2 2217
8 TraesCS2D01G051600 chr2A 10197776 10200393 2617 False 1716.0 1716 78.8220 9 2615 1 chr2A.!!$F2 2606
9 TraesCS2D01G051600 chr2A 40340258 40342646 2388 True 1330.0 1330 77.0900 207 2612 1 chr2A.!!$R1 2405
10 TraesCS2D01G051600 chr2A 20502486 20504677 2191 False 1304.0 1304 77.7230 425 2614 1 chr2A.!!$F3 2189
11 TraesCS2D01G051600 chr2A 9776942 9778774 1832 False 1125.0 1125 78.0570 207 2057 1 chr2A.!!$F1 1850
12 TraesCS2D01G051600 chr2A 10373527 10375786 2259 False 570.0 582 77.5505 288 2577 2 chr2A.!!$F5 2289
13 TraesCS2D01G051600 chr2A 10382330 10383881 1551 True 433.5 586 77.2185 425 2612 2 chr2A.!!$R3 2187
14 TraesCS2D01G051600 chr2A 9200345 9201955 1610 True 388.5 534 76.2825 1182 2612 2 chr2A.!!$R2 1430

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
927 2764 0.034896 TCTGGAAACGCCACTTCCTC 59.965 55.0 7.43 0.0 43.33 3.71 F
1038 2875 0.457166 TATTCGGTCTCGGTGTTGCG 60.457 55.0 0.00 0.0 36.95 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2568 4701 0.249489 GCACAGTCGTCAACTCACCT 60.249 55.0 0.00 0.0 35.45 4.00 R
2992 5370 0.242017 GATGTGCACTGAAACCTGGC 59.758 55.0 19.41 0.0 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 1548 4.456911 ACACTGCATGGTCTCAACAATAAG 59.543 41.667 0.00 0.00 0.00 1.73
90 1555 5.569059 GCATGGTCTCAACAATAAGAAAACG 59.431 40.000 0.00 0.00 0.00 3.60
135 1657 8.486210 AGGAACATGCTTCAGACTGTATTTATA 58.514 33.333 1.59 0.00 0.00 0.98
137 1659 8.438676 AACATGCTTCAGACTGTATTTATACC 57.561 34.615 1.59 0.00 32.33 2.73
152 1674 7.662669 TGTATTTATACCCCTAATTCGCCTTTC 59.337 37.037 0.00 0.00 32.33 2.62
177 1701 7.054124 CCCTTCCTAATTTAGTATGACAAGCA 58.946 38.462 2.88 0.00 0.00 3.91
178 1702 7.721399 CCCTTCCTAATTTAGTATGACAAGCAT 59.279 37.037 2.88 0.00 41.08 3.79
205 1731 2.367894 TGATGAGCTGGTCTGATGGATC 59.632 50.000 8.47 2.51 0.00 3.36
236 1762 2.128035 GTACCTTCAGATGCGATTCCG 58.872 52.381 0.00 0.00 39.16 4.30
348 1898 3.431856 CAACATGACAATCAGAATGGCG 58.568 45.455 0.00 0.00 36.16 5.69
353 1903 4.678509 TGACAATCAGAATGGCGTTTAC 57.321 40.909 0.00 0.00 36.16 2.01
370 1920 6.005289 GCGTTTACGTTTACTTGATAGTGTG 58.995 40.000 0.00 0.00 42.22 3.82
371 1921 6.519315 CGTTTACGTTTACTTGATAGTGTGG 58.481 40.000 0.00 0.00 33.61 4.17
441 2260 1.625315 TCATACTCTGCAGTGCTGGTT 59.375 47.619 20.35 10.89 33.62 3.67
499 2325 4.753233 CACTTTGTGGTCTCCTAGATCAG 58.247 47.826 0.00 0.00 35.74 2.90
504 2330 5.194473 TGTGGTCTCCTAGATCAGTACTT 57.806 43.478 0.00 0.00 35.74 2.24
515 2344 7.125811 TCCTAGATCAGTACTTTGCAATTAGGT 59.874 37.037 0.00 0.06 0.00 3.08
521 2350 3.011949 ACTTTGCAATTAGGTTGTGCG 57.988 42.857 0.00 0.00 41.27 5.34
894 2731 1.724545 ACATTACCGCCTATGCCCTA 58.275 50.000 0.00 0.00 0.00 3.53
924 2761 0.603975 AGCTCTGGAAACGCCACTTC 60.604 55.000 0.00 0.00 43.33 3.01
927 2764 0.034896 TCTGGAAACGCCACTTCCTC 59.965 55.000 7.43 0.00 43.33 3.71
994 2831 1.888436 TATCATCGGCAGCGGGATCC 61.888 60.000 1.92 1.92 0.00 3.36
1038 2875 0.457166 TATTCGGTCTCGGTGTTGCG 60.457 55.000 0.00 0.00 36.95 4.85
1053 2890 1.480954 GTTGCGAAGTATGGGGAGAGA 59.519 52.381 0.00 0.00 0.00 3.10
1108 2945 1.515020 CGGAGCTCTCTCAAGGTGG 59.485 63.158 14.64 0.00 41.13 4.61
1152 3058 5.345741 CCAAAATTTTTACACCGAGCATCAG 59.654 40.000 0.00 0.00 33.17 2.90
1299 3211 7.537596 TTCTTTGGACAACACAATAATCCAT 57.462 32.000 0.00 0.00 39.18 3.41
1332 3244 2.433145 CGTGAGCGCATGTGGACT 60.433 61.111 11.47 0.00 0.00 3.85
1395 3307 1.076024 ACCAAGGCAAGTGTGATCCAT 59.924 47.619 0.00 0.00 0.00 3.41
1511 3423 2.771089 AGCTGATGTTGTCGTCACATT 58.229 42.857 0.00 0.00 35.92 2.71
1651 3563 3.357079 GCAGTGGAAGGTGGCACG 61.357 66.667 12.17 0.00 0.00 5.34
1724 3636 7.335491 GTGATAATTACACGAAATTCGAGGAC 58.665 38.462 22.92 0.00 43.74 3.85
1787 3699 2.819115 CACCAGACAGATGGATTCGAG 58.181 52.381 0.00 0.00 43.57 4.04
1793 3705 2.955660 GACAGATGGATTCGAGGAGTCT 59.044 50.000 0.00 0.00 0.00 3.24
1817 3729 2.746362 AGCTCGGCAATCTTTTCAAGAG 59.254 45.455 0.00 0.00 41.61 2.85
1900 3813 2.666190 TCAAGGAGCGTGCACAGC 60.666 61.111 18.64 20.02 0.00 4.40
1922 3837 2.093106 GGTGGACGACATAGTCTCACT 58.907 52.381 13.85 0.00 39.73 3.41
1963 3878 2.229784 GGCATGCTCAGGTATAATTGGC 59.770 50.000 18.92 0.00 0.00 4.52
2018 4133 1.407437 GCTGTACATGGAGTTGGAGGG 60.407 57.143 0.00 0.00 0.00 4.30
2254 4375 4.513692 CCAATCTGGACGAGTTGTGTAAAA 59.486 41.667 0.00 0.00 40.96 1.52
2307 4434 0.798776 CCGCGCTCAAGAGATTGTTT 59.201 50.000 5.56 0.00 0.00 2.83
2328 4455 4.697756 CCACACCATCACCGCCGT 62.698 66.667 0.00 0.00 0.00 5.68
2559 4692 4.752879 GCGCACGCCAGGAACCTA 62.753 66.667 0.30 0.00 34.56 3.08
2568 4701 0.323629 CCAGGAACCTAAACAGCGGA 59.676 55.000 0.00 0.00 0.00 5.54
2618 4751 1.342819 GATAGAGCACCTCCGCTTGAT 59.657 52.381 0.00 0.00 44.01 2.57
2619 4752 2.067365 TAGAGCACCTCCGCTTGATA 57.933 50.000 0.00 0.00 44.01 2.15
2620 4753 1.195115 AGAGCACCTCCGCTTGATAA 58.805 50.000 0.00 0.00 44.01 1.75
2621 4754 1.555075 AGAGCACCTCCGCTTGATAAA 59.445 47.619 0.00 0.00 44.01 1.40
2622 4755 2.027192 AGAGCACCTCCGCTTGATAAAA 60.027 45.455 0.00 0.00 44.01 1.52
2623 4756 2.084546 AGCACCTCCGCTTGATAAAAC 58.915 47.619 0.00 0.00 39.99 2.43
2672 4805 4.910456 CGCTCGTGTGTAATCTATTCTACC 59.090 45.833 0.00 0.00 0.00 3.18
2754 5107 9.464714 TTGATTACTAATTCTACTCAATCGAGC 57.535 33.333 0.00 0.00 43.66 5.03
2778 5133 6.269315 CACAGGTTATGACTGAGTATCTCAC 58.731 44.000 0.00 0.00 35.39 3.51
2791 5146 8.268605 ACTGAGTATCTCACACTATCTTGTCTA 58.731 37.037 0.00 0.00 35.39 2.59
2798 5153 8.178313 TCTCACACTATCTTGTCTACTTGAAA 57.822 34.615 0.00 0.00 0.00 2.69
2805 5160 9.606631 ACTATCTTGTCTACTTGAAATCCATTC 57.393 33.333 0.00 0.00 38.60 2.67
2812 5167 6.254589 GTCTACTTGAAATCCATTCTGTCTCG 59.745 42.308 0.00 0.00 38.92 4.04
2816 5171 0.824109 AATCCATTCTGTCTCGCCGA 59.176 50.000 0.00 0.00 0.00 5.54
2826 5181 2.278206 CTCGCCGACGTCATCCAG 60.278 66.667 17.16 1.75 41.18 3.86
2829 5184 1.585521 CGCCGACGTCATCCAGTAC 60.586 63.158 17.16 0.00 33.53 2.73
2833 5188 0.179145 CGACGTCATCCAGTACCCAC 60.179 60.000 17.16 0.00 0.00 4.61
2842 5197 0.106708 CCAGTACCCACCGATCCATG 59.893 60.000 0.00 0.00 0.00 3.66
2843 5198 1.119684 CAGTACCCACCGATCCATGA 58.880 55.000 0.00 0.00 0.00 3.07
2846 5201 0.396435 TACCCACCGATCCATGATGC 59.604 55.000 0.00 0.00 0.00 3.91
2849 5204 1.512996 CCACCGATCCATGATGCAGC 61.513 60.000 0.00 0.00 0.00 5.25
2850 5205 0.534427 CACCGATCCATGATGCAGCT 60.534 55.000 2.53 0.00 0.00 4.24
2862 5240 0.809385 ATGCAGCTGACAGATTGTGC 59.191 50.000 20.43 9.32 0.00 4.57
2864 5242 0.168348 GCAGCTGACAGATTGTGCTG 59.832 55.000 20.43 13.91 45.00 4.41
2887 5265 9.046296 GCTGTACTTGTATGCTACTATCAAAAT 57.954 33.333 0.00 0.00 0.00 1.82
2926 5304 9.672673 AAGATTGTATTGTAAGCTTCTACATGT 57.327 29.630 0.00 2.69 28.47 3.21
2951 5329 0.109412 GCTTCAAGCATCTGTGTGCC 60.109 55.000 3.89 0.00 46.19 5.01
2958 5336 1.026182 GCATCTGTGTGCCGGAATCA 61.026 55.000 5.05 0.00 39.18 2.57
2967 5345 0.608035 TGCCGGAATCAGGTGTTTCC 60.608 55.000 5.05 9.07 39.41 3.13
2969 5347 1.739067 CCGGAATCAGGTGTTTCCTC 58.261 55.000 14.91 0.00 46.24 3.71
2970 5348 1.279271 CCGGAATCAGGTGTTTCCTCT 59.721 52.381 14.91 0.00 46.24 3.69
2971 5349 2.290323 CCGGAATCAGGTGTTTCCTCTT 60.290 50.000 14.91 0.00 46.24 2.85
2972 5350 3.412386 CGGAATCAGGTGTTTCCTCTTT 58.588 45.455 14.91 0.00 46.24 2.52
2973 5351 4.564821 CCGGAATCAGGTGTTTCCTCTTTA 60.565 45.833 14.91 0.00 46.24 1.85
2974 5352 4.392138 CGGAATCAGGTGTTTCCTCTTTAC 59.608 45.833 14.91 0.00 46.24 2.01
2975 5353 5.561679 GGAATCAGGTGTTTCCTCTTTACT 58.438 41.667 11.18 0.00 46.24 2.24
2976 5354 5.412904 GGAATCAGGTGTTTCCTCTTTACTG 59.587 44.000 11.18 0.00 46.24 2.74
2977 5355 5.568620 ATCAGGTGTTTCCTCTTTACTGT 57.431 39.130 0.00 0.00 46.24 3.55
2978 5356 6.681729 ATCAGGTGTTTCCTCTTTACTGTA 57.318 37.500 0.00 0.00 46.24 2.74
2979 5357 5.850614 TCAGGTGTTTCCTCTTTACTGTAC 58.149 41.667 0.00 0.00 46.24 2.90
2980 5358 5.601313 TCAGGTGTTTCCTCTTTACTGTACT 59.399 40.000 0.00 0.00 46.24 2.73
2981 5359 5.696724 CAGGTGTTTCCTCTTTACTGTACTG 59.303 44.000 0.00 0.00 46.24 2.74
2982 5360 4.995487 GGTGTTTCCTCTTTACTGTACTGG 59.005 45.833 4.66 0.00 0.00 4.00
2983 5361 4.451435 GTGTTTCCTCTTTACTGTACTGGC 59.549 45.833 4.66 0.00 0.00 4.85
2984 5362 4.101898 TGTTTCCTCTTTACTGTACTGGCA 59.898 41.667 4.66 0.00 0.00 4.92
2985 5363 3.955650 TCCTCTTTACTGTACTGGCAC 57.044 47.619 4.66 0.00 0.00 5.01
2986 5364 3.507411 TCCTCTTTACTGTACTGGCACT 58.493 45.455 4.66 0.00 0.00 4.40
2987 5365 3.510360 TCCTCTTTACTGTACTGGCACTC 59.490 47.826 4.66 0.00 0.00 3.51
2988 5366 3.258372 CCTCTTTACTGTACTGGCACTCA 59.742 47.826 4.66 0.00 0.00 3.41
2999 5377 2.282040 GCACTCAGCTGCCAGGTT 60.282 61.111 9.47 0.00 41.15 3.50
3000 5378 1.900498 GCACTCAGCTGCCAGGTTT 60.900 57.895 9.47 0.00 41.15 3.27
3001 5379 1.860484 GCACTCAGCTGCCAGGTTTC 61.860 60.000 9.47 0.00 41.15 2.78
3002 5380 0.535780 CACTCAGCTGCCAGGTTTCA 60.536 55.000 9.47 0.00 0.00 2.69
3003 5381 0.250640 ACTCAGCTGCCAGGTTTCAG 60.251 55.000 9.47 0.00 0.00 3.02
3004 5382 0.250640 CTCAGCTGCCAGGTTTCAGT 60.251 55.000 9.47 0.00 33.09 3.41
3005 5383 0.535780 TCAGCTGCCAGGTTTCAGTG 60.536 55.000 9.47 0.00 33.09 3.66
3006 5384 1.900498 AGCTGCCAGGTTTCAGTGC 60.900 57.895 0.00 0.00 33.09 4.40
3007 5385 2.195567 GCTGCCAGGTTTCAGTGCA 61.196 57.895 0.00 0.00 33.09 4.57
3008 5386 1.656441 CTGCCAGGTTTCAGTGCAC 59.344 57.895 9.40 9.40 0.00 4.57
3009 5387 1.077140 TGCCAGGTTTCAGTGCACA 60.077 52.632 21.04 0.00 0.00 4.57
3010 5388 0.467844 TGCCAGGTTTCAGTGCACAT 60.468 50.000 21.04 0.75 0.00 3.21
3011 5389 0.242017 GCCAGGTTTCAGTGCACATC 59.758 55.000 21.04 0.00 0.00 3.06
3012 5390 0.883833 CCAGGTTTCAGTGCACATCC 59.116 55.000 21.04 12.83 0.00 3.51
3013 5391 0.883833 CAGGTTTCAGTGCACATCCC 59.116 55.000 21.04 10.96 0.00 3.85
3014 5392 0.251341 AGGTTTCAGTGCACATCCCC 60.251 55.000 21.04 11.68 0.00 4.81
3015 5393 0.251341 GGTTTCAGTGCACATCCCCT 60.251 55.000 21.04 0.00 0.00 4.79
3016 5394 0.883833 GTTTCAGTGCACATCCCCTG 59.116 55.000 21.04 7.43 0.00 4.45
3017 5395 0.478072 TTTCAGTGCACATCCCCTGT 59.522 50.000 21.04 0.00 39.20 4.00
3024 5402 2.994995 ACATCCCCTGTGACGCGA 60.995 61.111 15.93 0.00 36.48 5.87
3025 5403 2.359169 ACATCCCCTGTGACGCGAT 61.359 57.895 15.93 0.00 36.48 4.58
3026 5404 1.153369 CATCCCCTGTGACGCGATT 60.153 57.895 15.93 0.00 0.00 3.34
3027 5405 1.144057 ATCCCCTGTGACGCGATTC 59.856 57.895 15.93 0.00 0.00 2.52
3028 5406 2.311688 ATCCCCTGTGACGCGATTCC 62.312 60.000 15.93 0.00 0.00 3.01
3029 5407 2.264480 CCCTGTGACGCGATTCCA 59.736 61.111 15.93 1.65 0.00 3.53
3030 5408 1.811266 CCCTGTGACGCGATTCCAG 60.811 63.158 15.93 12.68 0.00 3.86
3031 5409 1.811266 CCTGTGACGCGATTCCAGG 60.811 63.158 15.93 17.84 37.00 4.45
3032 5410 1.079819 CTGTGACGCGATTCCAGGT 60.080 57.895 15.93 0.00 0.00 4.00
3033 5411 1.078759 CTGTGACGCGATTCCAGGTC 61.079 60.000 15.93 0.00 0.00 3.85
3034 5412 1.215647 GTGACGCGATTCCAGGTCT 59.784 57.895 15.93 0.00 0.00 3.85
3035 5413 1.078759 GTGACGCGATTCCAGGTCTG 61.079 60.000 15.93 0.00 0.00 3.51
3036 5414 2.125512 ACGCGATTCCAGGTCTGC 60.126 61.111 15.93 0.00 0.00 4.26
3037 5415 2.185350 CGCGATTCCAGGTCTGCT 59.815 61.111 0.00 0.00 0.00 4.24
3038 5416 2.169789 CGCGATTCCAGGTCTGCTG 61.170 63.158 0.00 0.00 0.00 4.41
3039 5417 1.817099 GCGATTCCAGGTCTGCTGG 60.817 63.158 0.00 0.00 43.06 4.85
3040 5418 1.599047 CGATTCCAGGTCTGCTGGT 59.401 57.895 0.00 0.00 42.35 4.00
3041 5419 0.742281 CGATTCCAGGTCTGCTGGTG 60.742 60.000 0.00 0.00 42.35 4.17
3042 5420 0.326264 GATTCCAGGTCTGCTGGTGT 59.674 55.000 0.00 0.00 42.35 4.16
3043 5421 0.326264 ATTCCAGGTCTGCTGGTGTC 59.674 55.000 0.00 0.00 42.35 3.67
3044 5422 2.047844 CCAGGTCTGCTGGTGTCG 60.048 66.667 0.00 0.00 37.22 4.35
3045 5423 2.737180 CAGGTCTGCTGGTGTCGT 59.263 61.111 0.00 0.00 0.00 4.34
3046 5424 1.665916 CAGGTCTGCTGGTGTCGTG 60.666 63.158 0.00 0.00 0.00 4.35
3047 5425 3.044305 GGTCTGCTGGTGTCGTGC 61.044 66.667 0.00 0.00 0.00 5.34
3048 5426 2.029666 GTCTGCTGGTGTCGTGCT 59.970 61.111 0.00 0.00 0.00 4.40
3049 5427 2.029518 TCTGCTGGTGTCGTGCTG 59.970 61.111 0.00 0.00 0.00 4.41
3050 5428 3.720193 CTGCTGGTGTCGTGCTGC 61.720 66.667 0.00 0.00 0.00 5.25
3060 5438 2.316237 TCGTGCTGCGATTGTTTGT 58.684 47.368 0.00 0.00 45.68 2.83
3061 5439 0.234625 TCGTGCTGCGATTGTTTGTC 59.765 50.000 0.00 0.00 45.68 3.18
3062 5440 0.725784 CGTGCTGCGATTGTTTGTCC 60.726 55.000 0.00 0.00 44.77 4.02
3063 5441 0.593128 GTGCTGCGATTGTTTGTCCT 59.407 50.000 0.00 0.00 0.00 3.85
3064 5442 1.804151 GTGCTGCGATTGTTTGTCCTA 59.196 47.619 0.00 0.00 0.00 2.94
3065 5443 2.076100 TGCTGCGATTGTTTGTCCTAG 58.924 47.619 0.00 0.00 0.00 3.02
3066 5444 2.076863 GCTGCGATTGTTTGTCCTAGT 58.923 47.619 0.00 0.00 0.00 2.57
3067 5445 3.259064 GCTGCGATTGTTTGTCCTAGTA 58.741 45.455 0.00 0.00 0.00 1.82
3068 5446 3.062234 GCTGCGATTGTTTGTCCTAGTAC 59.938 47.826 0.00 0.00 0.00 2.73
3069 5447 3.247442 TGCGATTGTTTGTCCTAGTACG 58.753 45.455 0.00 0.00 0.00 3.67
3070 5448 3.057386 TGCGATTGTTTGTCCTAGTACGA 60.057 43.478 0.00 0.00 0.00 3.43
3071 5449 4.110482 GCGATTGTTTGTCCTAGTACGAT 58.890 43.478 0.00 0.00 0.00 3.73
3072 5450 4.206609 GCGATTGTTTGTCCTAGTACGATC 59.793 45.833 0.00 0.00 0.00 3.69
3073 5451 4.436847 CGATTGTTTGTCCTAGTACGATCG 59.563 45.833 14.88 14.88 43.98 3.69
3074 5452 5.571784 ATTGTTTGTCCTAGTACGATCGA 57.428 39.130 24.34 2.23 0.00 3.59
3075 5453 4.346734 TGTTTGTCCTAGTACGATCGAC 57.653 45.455 24.34 15.19 0.00 4.20
3076 5454 4.005650 TGTTTGTCCTAGTACGATCGACT 58.994 43.478 24.34 21.14 0.00 4.18
3077 5455 4.142752 TGTTTGTCCTAGTACGATCGACTG 60.143 45.833 24.34 13.76 0.00 3.51
3078 5456 1.938577 TGTCCTAGTACGATCGACTGC 59.061 52.381 24.34 3.62 0.00 4.40
3079 5457 1.263752 GTCCTAGTACGATCGACTGCC 59.736 57.143 24.34 4.21 0.00 4.85
3080 5458 0.592148 CCTAGTACGATCGACTGCCC 59.408 60.000 24.34 2.39 0.00 5.36
3081 5459 0.592148 CTAGTACGATCGACTGCCCC 59.408 60.000 24.34 0.96 0.00 5.80
3082 5460 0.182061 TAGTACGATCGACTGCCCCT 59.818 55.000 24.34 8.36 0.00 4.79
3083 5461 0.683504 AGTACGATCGACTGCCCCTT 60.684 55.000 24.34 0.00 0.00 3.95
3084 5462 0.248949 GTACGATCGACTGCCCCTTC 60.249 60.000 24.34 0.00 0.00 3.46
3085 5463 0.681887 TACGATCGACTGCCCCTTCA 60.682 55.000 24.34 0.00 0.00 3.02
3086 5464 1.227089 CGATCGACTGCCCCTTCAG 60.227 63.158 10.26 0.00 39.86 3.02
3087 5465 1.144936 GATCGACTGCCCCTTCAGG 59.855 63.158 0.00 0.00 38.36 3.86
3088 5466 1.613630 ATCGACTGCCCCTTCAGGT 60.614 57.895 0.00 0.00 38.36 4.00
3089 5467 1.617947 ATCGACTGCCCCTTCAGGTC 61.618 60.000 0.00 0.00 38.36 3.85
3090 5468 2.583441 CGACTGCCCCTTCAGGTCA 61.583 63.158 0.00 0.00 38.36 4.02
3091 5469 1.298014 GACTGCCCCTTCAGGTCAG 59.702 63.158 9.60 9.60 38.36 3.51
3092 5470 2.045536 CTGCCCCTTCAGGTCAGC 60.046 66.667 0.00 0.00 30.84 4.26
3093 5471 2.530151 TGCCCCTTCAGGTCAGCT 60.530 61.111 0.00 0.00 0.00 4.24
3094 5472 2.270527 GCCCCTTCAGGTCAGCTC 59.729 66.667 0.00 0.00 0.00 4.09
3095 5473 2.581354 CCCCTTCAGGTCAGCTCG 59.419 66.667 0.00 0.00 0.00 5.03
3096 5474 2.125350 CCCTTCAGGTCAGCTCGC 60.125 66.667 0.00 0.00 0.00 5.03
3097 5475 2.507992 CCTTCAGGTCAGCTCGCG 60.508 66.667 0.00 0.00 0.00 5.87
3098 5476 2.507992 CTTCAGGTCAGCTCGCGG 60.508 66.667 6.13 0.00 0.00 6.46
3099 5477 3.997064 CTTCAGGTCAGCTCGCGGG 62.997 68.421 6.13 2.60 0.00 6.13
3101 5479 4.379243 CAGGTCAGCTCGCGGGTT 62.379 66.667 8.30 0.00 0.00 4.11
3102 5480 3.626924 AGGTCAGCTCGCGGGTTT 61.627 61.111 8.30 0.00 0.00 3.27
3103 5481 3.423154 GGTCAGCTCGCGGGTTTG 61.423 66.667 8.30 7.11 0.00 2.93
3104 5482 2.665185 GTCAGCTCGCGGGTTTGT 60.665 61.111 8.30 0.00 0.00 2.83
3105 5483 2.110213 TCAGCTCGCGGGTTTGTT 59.890 55.556 8.30 0.00 0.00 2.83
3106 5484 2.250939 TCAGCTCGCGGGTTTGTTG 61.251 57.895 8.30 0.00 0.00 3.33
3107 5485 2.203153 AGCTCGCGGGTTTGTTGT 60.203 55.556 8.30 0.00 0.00 3.32
3108 5486 1.822186 AGCTCGCGGGTTTGTTGTT 60.822 52.632 8.30 0.00 0.00 2.83
3109 5487 1.065109 GCTCGCGGGTTTGTTGTTT 59.935 52.632 8.30 0.00 0.00 2.83
3110 5488 0.933047 GCTCGCGGGTTTGTTGTTTC 60.933 55.000 8.30 0.00 0.00 2.78
3111 5489 0.317519 CTCGCGGGTTTGTTGTTTCC 60.318 55.000 6.13 0.00 0.00 3.13
3112 5490 1.030488 TCGCGGGTTTGTTGTTTCCA 61.030 50.000 6.13 0.00 0.00 3.53
3113 5491 0.593773 CGCGGGTTTGTTGTTTCCAG 60.594 55.000 0.00 0.00 0.00 3.86
3114 5492 0.249280 GCGGGTTTGTTGTTTCCAGG 60.249 55.000 0.00 0.00 0.00 4.45
3115 5493 1.107945 CGGGTTTGTTGTTTCCAGGT 58.892 50.000 0.00 0.00 0.00 4.00
3116 5494 1.478916 CGGGTTTGTTGTTTCCAGGTT 59.521 47.619 0.00 0.00 0.00 3.50
3117 5495 2.093921 CGGGTTTGTTGTTTCCAGGTTT 60.094 45.455 0.00 0.00 0.00 3.27
3118 5496 3.266636 GGGTTTGTTGTTTCCAGGTTTG 58.733 45.455 0.00 0.00 0.00 2.93
3119 5497 3.307129 GGGTTTGTTGTTTCCAGGTTTGT 60.307 43.478 0.00 0.00 0.00 2.83
3120 5498 3.930229 GGTTTGTTGTTTCCAGGTTTGTC 59.070 43.478 0.00 0.00 0.00 3.18
3121 5499 3.878160 TTGTTGTTTCCAGGTTTGTCC 57.122 42.857 0.00 0.00 0.00 4.02
3132 5510 3.884037 AGGTTTGTCCTGTTCTCCATT 57.116 42.857 0.00 0.00 46.19 3.16
3133 5511 3.490348 AGGTTTGTCCTGTTCTCCATTG 58.510 45.455 0.00 0.00 46.19 2.82
3134 5512 2.558359 GGTTTGTCCTGTTCTCCATTGG 59.442 50.000 0.00 0.00 0.00 3.16
3135 5513 1.909700 TTGTCCTGTTCTCCATTGGC 58.090 50.000 0.00 0.00 0.00 4.52
3136 5514 1.067295 TGTCCTGTTCTCCATTGGCT 58.933 50.000 0.00 0.00 0.00 4.75
3137 5515 1.003580 TGTCCTGTTCTCCATTGGCTC 59.996 52.381 0.00 0.00 0.00 4.70
3138 5516 1.280421 GTCCTGTTCTCCATTGGCTCT 59.720 52.381 0.00 0.00 0.00 4.09
3139 5517 1.556911 TCCTGTTCTCCATTGGCTCTC 59.443 52.381 0.00 0.00 0.00 3.20
3140 5518 1.558756 CCTGTTCTCCATTGGCTCTCT 59.441 52.381 0.00 0.00 0.00 3.10
3141 5519 2.630158 CTGTTCTCCATTGGCTCTCTG 58.370 52.381 0.00 0.00 0.00 3.35
3142 5520 1.980765 TGTTCTCCATTGGCTCTCTGT 59.019 47.619 0.00 0.00 0.00 3.41
3143 5521 2.289882 TGTTCTCCATTGGCTCTCTGTG 60.290 50.000 0.00 0.00 0.00 3.66
3144 5522 1.649321 TCTCCATTGGCTCTCTGTGT 58.351 50.000 0.00 0.00 0.00 3.72
3145 5523 1.980765 TCTCCATTGGCTCTCTGTGTT 59.019 47.619 0.00 0.00 0.00 3.32
3146 5524 2.082231 CTCCATTGGCTCTCTGTGTTG 58.918 52.381 0.00 0.00 0.00 3.33
3147 5525 1.421268 TCCATTGGCTCTCTGTGTTGT 59.579 47.619 0.00 0.00 0.00 3.32
3148 5526 2.158623 TCCATTGGCTCTCTGTGTTGTT 60.159 45.455 0.00 0.00 0.00 2.83
3149 5527 3.072330 TCCATTGGCTCTCTGTGTTGTTA 59.928 43.478 0.00 0.00 0.00 2.41
3150 5528 4.012374 CCATTGGCTCTCTGTGTTGTTAT 58.988 43.478 0.00 0.00 0.00 1.89
3151 5529 4.095483 CCATTGGCTCTCTGTGTTGTTATC 59.905 45.833 0.00 0.00 0.00 1.75
3152 5530 4.623932 TTGGCTCTCTGTGTTGTTATCT 57.376 40.909 0.00 0.00 0.00 1.98
3153 5531 3.930336 TGGCTCTCTGTGTTGTTATCTG 58.070 45.455 0.00 0.00 0.00 2.90
3154 5532 3.324846 TGGCTCTCTGTGTTGTTATCTGT 59.675 43.478 0.00 0.00 0.00 3.41
3155 5533 4.526650 TGGCTCTCTGTGTTGTTATCTGTA 59.473 41.667 0.00 0.00 0.00 2.74
3156 5534 5.105752 GGCTCTCTGTGTTGTTATCTGTAG 58.894 45.833 0.00 0.00 0.00 2.74
3157 5535 5.105716 GGCTCTCTGTGTTGTTATCTGTAGA 60.106 44.000 0.00 0.00 0.00 2.59
3158 5536 6.033341 GCTCTCTGTGTTGTTATCTGTAGAG 58.967 44.000 0.00 0.00 33.51 2.43
3159 5537 5.955488 TCTCTGTGTTGTTATCTGTAGAGC 58.045 41.667 0.00 0.00 32.56 4.09
3160 5538 4.733850 TCTGTGTTGTTATCTGTAGAGCG 58.266 43.478 0.00 0.00 0.00 5.03
3161 5539 4.217767 TCTGTGTTGTTATCTGTAGAGCGT 59.782 41.667 0.00 0.00 0.00 5.07
3162 5540 4.234574 TGTGTTGTTATCTGTAGAGCGTG 58.765 43.478 0.00 0.00 0.00 5.34
3163 5541 4.235360 GTGTTGTTATCTGTAGAGCGTGT 58.765 43.478 0.00 0.00 0.00 4.49
3164 5542 4.090066 GTGTTGTTATCTGTAGAGCGTGTG 59.910 45.833 0.00 0.00 0.00 3.82
3165 5543 4.235360 GTTGTTATCTGTAGAGCGTGTGT 58.765 43.478 0.00 0.00 0.00 3.72
3166 5544 4.092771 TGTTATCTGTAGAGCGTGTGTC 57.907 45.455 0.00 0.00 0.00 3.67
3167 5545 3.119602 TGTTATCTGTAGAGCGTGTGTCC 60.120 47.826 0.00 0.00 0.00 4.02
3168 5546 1.840737 ATCTGTAGAGCGTGTGTCCT 58.159 50.000 0.00 0.00 0.00 3.85
3169 5547 0.881796 TCTGTAGAGCGTGTGTCCTG 59.118 55.000 0.00 0.00 0.00 3.86
3170 5548 0.598562 CTGTAGAGCGTGTGTCCTGT 59.401 55.000 0.00 0.00 0.00 4.00
3171 5549 0.313987 TGTAGAGCGTGTGTCCTGTG 59.686 55.000 0.00 0.00 0.00 3.66
3172 5550 1.009389 GTAGAGCGTGTGTCCTGTGC 61.009 60.000 0.00 0.00 0.00 4.57
3173 5551 1.460273 TAGAGCGTGTGTCCTGTGCA 61.460 55.000 0.00 0.00 0.00 4.57
3174 5552 1.887242 GAGCGTGTGTCCTGTGCAA 60.887 57.895 0.00 0.00 0.00 4.08
3175 5553 1.227943 AGCGTGTGTCCTGTGCAAT 60.228 52.632 0.00 0.00 0.00 3.56
3176 5554 1.081906 GCGTGTGTCCTGTGCAATG 60.082 57.895 0.00 0.00 0.00 2.82
3177 5555 1.506309 GCGTGTGTCCTGTGCAATGA 61.506 55.000 0.00 0.00 0.00 2.57
3178 5556 0.235665 CGTGTGTCCTGTGCAATGAC 59.764 55.000 0.00 0.00 0.00 3.06
3179 5557 1.597742 GTGTGTCCTGTGCAATGACT 58.402 50.000 11.42 0.00 0.00 3.41
3180 5558 1.532868 GTGTGTCCTGTGCAATGACTC 59.467 52.381 11.42 8.95 0.00 3.36
3181 5559 1.140652 TGTGTCCTGTGCAATGACTCA 59.859 47.619 11.42 10.92 32.08 3.41
3182 5560 1.802960 GTGTCCTGTGCAATGACTCAG 59.197 52.381 11.42 3.48 0.00 3.35
3183 5561 1.417517 TGTCCTGTGCAATGACTCAGT 59.582 47.619 11.42 0.00 30.88 3.41
3184 5562 1.802960 GTCCTGTGCAATGACTCAGTG 59.197 52.381 1.98 1.98 32.29 3.66
3185 5563 1.693606 TCCTGTGCAATGACTCAGTGA 59.306 47.619 10.65 0.00 30.53 3.41
3186 5564 2.104622 TCCTGTGCAATGACTCAGTGAA 59.895 45.455 10.65 0.00 30.53 3.18
3187 5565 2.225019 CCTGTGCAATGACTCAGTGAAC 59.775 50.000 10.24 10.24 38.34 3.18
3188 5566 2.874086 CTGTGCAATGACTCAGTGAACA 59.126 45.455 17.43 17.43 44.25 3.18
3189 5567 3.277715 TGTGCAATGACTCAGTGAACAA 58.722 40.909 16.39 2.54 43.63 2.83
3190 5568 3.693578 TGTGCAATGACTCAGTGAACAAA 59.306 39.130 16.39 0.00 43.63 2.83
3191 5569 4.338964 TGTGCAATGACTCAGTGAACAAAT 59.661 37.500 16.39 0.00 43.63 2.32
3192 5570 5.163530 TGTGCAATGACTCAGTGAACAAATT 60.164 36.000 16.39 0.00 43.63 1.82
3193 5571 5.750067 GTGCAATGACTCAGTGAACAAATTT 59.250 36.000 11.98 0.00 37.84 1.82
3194 5572 5.749588 TGCAATGACTCAGTGAACAAATTTG 59.250 36.000 16.67 16.67 30.53 2.32
3195 5573 5.750067 GCAATGACTCAGTGAACAAATTTGT 59.250 36.000 18.13 18.13 34.84 2.83
3196 5574 6.291955 GCAATGACTCAGTGAACAAATTTGTG 60.292 38.462 23.93 11.46 34.02 3.33
3197 5575 5.895636 TGACTCAGTGAACAAATTTGTGT 57.104 34.783 23.93 15.05 41.31 3.72
3198 5576 6.266168 TGACTCAGTGAACAAATTTGTGTT 57.734 33.333 23.93 9.89 44.38 3.32
3209 5587 6.974932 ACAAATTTGTGTTGTATGTTTGCA 57.025 29.167 22.71 0.00 40.49 4.08
3215 5593 3.181492 TGTGTTGTATGTTTGCACAGGTG 60.181 43.478 0.00 0.00 35.94 4.00
3235 5614 1.592081 GTCTGTTGCAGCGATGATCTC 59.408 52.381 4.02 0.00 0.00 2.75
3240 5619 0.248784 TGCAGCGATGATCTCTGACG 60.249 55.000 15.99 0.00 31.20 4.35
3244 5623 3.182182 CAGCGATGATCTCTGACGAAAA 58.818 45.455 6.58 0.00 31.20 2.29
3245 5624 3.801050 CAGCGATGATCTCTGACGAAAAT 59.199 43.478 6.58 0.00 31.20 1.82
3247 5626 5.460091 CAGCGATGATCTCTGACGAAAATTA 59.540 40.000 6.58 0.00 31.20 1.40
3251 5630 7.148672 GCGATGATCTCTGACGAAAATTATGAT 60.149 37.037 0.00 0.00 0.00 2.45
3256 5637 8.722480 ATCTCTGACGAAAATTATGATGTTCA 57.278 30.769 1.69 0.00 30.18 3.18
3261 5642 9.993881 CTGACGAAAATTATGATGTTCAAAAAC 57.006 29.630 1.69 0.00 30.18 2.43
3281 5662 7.839680 AAAACAGATTTAGGACAATGAAGGT 57.160 32.000 0.00 0.00 0.00 3.50
3282 5663 7.454260 AAACAGATTTAGGACAATGAAGGTC 57.546 36.000 0.00 0.00 34.52 3.85
3283 5664 6.380079 ACAGATTTAGGACAATGAAGGTCT 57.620 37.500 0.00 0.00 35.61 3.85
3286 5667 6.881065 CAGATTTAGGACAATGAAGGTCTTGA 59.119 38.462 0.00 0.00 35.61 3.02
3287 5668 7.065563 CAGATTTAGGACAATGAAGGTCTTGAG 59.934 40.741 0.00 0.00 35.61 3.02
3288 5669 3.064900 AGGACAATGAAGGTCTTGAGC 57.935 47.619 0.00 0.00 35.61 4.26
3289 5670 2.641815 AGGACAATGAAGGTCTTGAGCT 59.358 45.455 0.00 0.00 35.61 4.09
3290 5671 2.746362 GGACAATGAAGGTCTTGAGCTG 59.254 50.000 2.96 0.00 35.61 4.24
3291 5672 3.406764 GACAATGAAGGTCTTGAGCTGT 58.593 45.455 2.96 0.00 32.54 4.40
3292 5673 3.406764 ACAATGAAGGTCTTGAGCTGTC 58.593 45.455 2.96 4.62 0.00 3.51
3293 5674 3.181451 ACAATGAAGGTCTTGAGCTGTCA 60.181 43.478 2.96 9.29 0.00 3.58
3294 5675 2.827800 TGAAGGTCTTGAGCTGTCAG 57.172 50.000 2.96 0.00 32.98 3.51
3295 5676 1.345741 TGAAGGTCTTGAGCTGTCAGG 59.654 52.381 1.14 0.00 32.98 3.86
3296 5677 0.689623 AAGGTCTTGAGCTGTCAGGG 59.310 55.000 1.14 0.00 32.98 4.45
3297 5678 1.376553 GGTCTTGAGCTGTCAGGGC 60.377 63.158 1.14 0.00 33.67 5.19
3298 5679 1.372683 GTCTTGAGCTGTCAGGGCA 59.627 57.895 1.14 0.00 34.57 5.36
3299 5680 0.952984 GTCTTGAGCTGTCAGGGCAC 60.953 60.000 1.14 0.00 34.57 5.01
3300 5681 1.123861 TCTTGAGCTGTCAGGGCACT 61.124 55.000 1.14 0.00 32.98 4.40
3301 5682 0.954449 CTTGAGCTGTCAGGGCACTG 60.954 60.000 10.61 10.61 46.30 3.66
3302 5683 2.745492 GAGCTGTCAGGGCACTGC 60.745 66.667 12.37 7.31 44.54 4.40
3303 5684 3.247648 AGCTGTCAGGGCACTGCT 61.248 61.111 12.37 0.78 44.28 4.24
3304 5685 3.054503 GCTGTCAGGGCACTGCTG 61.055 66.667 12.37 11.62 44.54 4.41
3305 5686 2.429058 CTGTCAGGGCACTGCTGT 59.571 61.111 12.37 0.00 44.54 4.40
3306 5687 1.670406 CTGTCAGGGCACTGCTGTC 60.670 63.158 12.37 2.19 44.54 3.51
3313 5694 1.361668 GGGCACTGCTGTCGTATGTG 61.362 60.000 0.00 0.00 0.00 3.21
3327 5708 5.457473 TGTCGTATGTGTATATCAGTTTGCG 59.543 40.000 0.00 0.00 0.00 4.85
3340 5721 3.186409 TCAGTTTGCGATTTACTGACAGC 59.814 43.478 1.25 0.00 42.31 4.40
3345 5726 1.061711 GCGATTTACTGACAGCAGCAG 59.938 52.381 1.25 0.00 46.26 4.24
3347 5728 2.995939 CGATTTACTGACAGCAGCAGAA 59.004 45.455 1.25 0.00 46.26 3.02
3348 5729 3.433274 CGATTTACTGACAGCAGCAGAAA 59.567 43.478 1.25 4.78 46.26 2.52
3349 5730 4.435253 CGATTTACTGACAGCAGCAGAAAG 60.435 45.833 1.25 0.00 46.26 2.62
3350 5731 3.475566 TTACTGACAGCAGCAGAAAGT 57.524 42.857 1.25 0.00 46.26 2.66
3353 5734 1.530293 CTGACAGCAGCAGAAAGTCAC 59.470 52.381 0.00 0.00 35.57 3.67
3354 5735 1.134431 TGACAGCAGCAGAAAGTCACA 60.134 47.619 0.00 0.00 34.59 3.58
3355 5736 1.942657 GACAGCAGCAGAAAGTCACAA 59.057 47.619 0.00 0.00 0.00 3.33
3356 5737 1.945394 ACAGCAGCAGAAAGTCACAAG 59.055 47.619 0.00 0.00 0.00 3.16
3357 5738 0.950116 AGCAGCAGAAAGTCACAAGC 59.050 50.000 0.00 0.00 0.00 4.01
3358 5739 0.664761 GCAGCAGAAAGTCACAAGCA 59.335 50.000 0.00 0.00 0.00 3.91
3359 5740 1.334779 GCAGCAGAAAGTCACAAGCAG 60.335 52.381 0.00 0.00 0.00 4.24
3360 5741 1.945394 CAGCAGAAAGTCACAAGCAGT 59.055 47.619 0.00 0.00 0.00 4.40
3361 5742 2.357009 CAGCAGAAAGTCACAAGCAGTT 59.643 45.455 0.00 0.00 0.00 3.16
3380 7902 2.519377 TTGTGTCGTGTCAAGTAGGG 57.481 50.000 0.00 0.00 0.00 3.53
3390 7912 0.474854 TCAAGTAGGGGGTTCTGGCA 60.475 55.000 0.00 0.00 0.00 4.92
3391 7913 0.035056 CAAGTAGGGGGTTCTGGCAG 60.035 60.000 8.58 8.58 0.00 4.85
3408 7997 1.581934 CAGCGTTCCTCAACTGACAA 58.418 50.000 0.00 0.00 31.67 3.18
3415 8004 2.862541 TCCTCAACTGACAACAATGGG 58.137 47.619 0.00 0.00 0.00 4.00
3420 8009 3.074390 TCAACTGACAACAATGGGGAGAT 59.926 43.478 0.00 0.00 0.00 2.75
3421 8010 3.356529 ACTGACAACAATGGGGAGATC 57.643 47.619 0.00 0.00 0.00 2.75
3422 8011 2.644299 ACTGACAACAATGGGGAGATCA 59.356 45.455 0.00 0.00 0.00 2.92
3433 8022 0.467804 GGGAGATCAGCTTCAGGTCC 59.532 60.000 0.00 0.00 0.00 4.46
3434 8023 1.494960 GGAGATCAGCTTCAGGTCCT 58.505 55.000 0.00 0.00 0.00 3.85
3435 8024 1.138661 GGAGATCAGCTTCAGGTCCTG 59.861 57.143 13.21 13.21 0.00 3.86
3436 8025 1.138661 GAGATCAGCTTCAGGTCCTGG 59.861 57.143 19.11 4.91 31.51 4.45
3437 8026 0.463474 GATCAGCTTCAGGTCCTGGC 60.463 60.000 19.11 14.78 31.51 4.85
3438 8027 1.203441 ATCAGCTTCAGGTCCTGGCA 61.203 55.000 19.11 5.34 31.51 4.92
3439 8028 1.073722 CAGCTTCAGGTCCTGGCAA 59.926 57.895 19.11 5.96 31.51 4.52
3440 8029 0.323178 CAGCTTCAGGTCCTGGCAAT 60.323 55.000 19.11 0.60 31.51 3.56
3441 8030 0.323178 AGCTTCAGGTCCTGGCAATG 60.323 55.000 19.11 3.59 31.51 2.82
3442 8031 1.941999 GCTTCAGGTCCTGGCAATGC 61.942 60.000 19.11 9.68 31.51 3.56
3443 8032 1.651240 CTTCAGGTCCTGGCAATGCG 61.651 60.000 19.11 0.00 31.51 4.73
3444 8033 2.360350 CAGGTCCTGGCAATGCGT 60.360 61.111 11.46 0.00 0.00 5.24
3445 8034 1.078497 CAGGTCCTGGCAATGCGTA 60.078 57.895 11.46 0.00 0.00 4.42
3446 8035 1.091771 CAGGTCCTGGCAATGCGTAG 61.092 60.000 11.46 0.00 0.00 3.51
3447 8036 1.819632 GGTCCTGGCAATGCGTAGG 60.820 63.158 17.57 17.57 35.74 3.18
3448 8037 1.220749 GTCCTGGCAATGCGTAGGA 59.779 57.895 20.90 20.90 39.20 2.94
3449 8038 0.811616 GTCCTGGCAATGCGTAGGAG 60.812 60.000 23.91 5.30 41.04 3.69
3450 8039 1.221840 CCTGGCAATGCGTAGGAGT 59.778 57.895 18.49 0.00 36.24 3.85
3451 8040 0.392998 CCTGGCAATGCGTAGGAGTT 60.393 55.000 18.49 0.00 36.24 3.01
3452 8041 0.729116 CTGGCAATGCGTAGGAGTTG 59.271 55.000 0.00 0.00 0.00 3.16
3453 8042 0.676466 TGGCAATGCGTAGGAGTTGG 60.676 55.000 0.00 0.00 0.00 3.77
3454 8043 0.676782 GGCAATGCGTAGGAGTTGGT 60.677 55.000 0.00 0.00 0.00 3.67
3455 8044 0.727398 GCAATGCGTAGGAGTTGGTC 59.273 55.000 0.00 0.00 0.00 4.02
3456 8045 1.676014 GCAATGCGTAGGAGTTGGTCT 60.676 52.381 0.00 0.00 0.00 3.85
3457 8046 2.271800 CAATGCGTAGGAGTTGGTCTC 58.728 52.381 0.00 0.00 42.07 3.36
3458 8047 0.456221 ATGCGTAGGAGTTGGTCTCG 59.544 55.000 0.00 0.00 43.60 4.04
3459 8048 0.892358 TGCGTAGGAGTTGGTCTCGT 60.892 55.000 0.00 0.00 43.60 4.18
3460 8049 0.243095 GCGTAGGAGTTGGTCTCGTT 59.757 55.000 0.00 0.00 43.60 3.85
3461 8050 1.336609 GCGTAGGAGTTGGTCTCGTTT 60.337 52.381 0.00 0.00 43.60 3.60
3462 8051 2.593257 CGTAGGAGTTGGTCTCGTTTC 58.407 52.381 0.00 0.00 43.60 2.78
3463 8052 2.670509 CGTAGGAGTTGGTCTCGTTTCC 60.671 54.545 0.00 0.00 43.60 3.13
3464 8053 0.317479 AGGAGTTGGTCTCGTTTCCG 59.683 55.000 0.00 0.00 43.60 4.30
3465 8054 1.289800 GGAGTTGGTCTCGTTTCCGC 61.290 60.000 0.00 0.00 43.60 5.54
3466 8055 0.319641 GAGTTGGTCTCGTTTCCGCT 60.320 55.000 0.00 0.00 33.25 5.52
3467 8056 0.319641 AGTTGGTCTCGTTTCCGCTC 60.320 55.000 0.00 0.00 0.00 5.03
3468 8057 0.599204 GTTGGTCTCGTTTCCGCTCA 60.599 55.000 0.00 0.00 0.00 4.26
3469 8058 0.319555 TTGGTCTCGTTTCCGCTCAG 60.320 55.000 0.00 0.00 0.00 3.35
3470 8059 1.289380 GGTCTCGTTTCCGCTCAGT 59.711 57.895 0.00 0.00 0.00 3.41
3471 8060 0.733223 GGTCTCGTTTCCGCTCAGTC 60.733 60.000 0.00 0.00 0.00 3.51
3472 8061 0.039437 GTCTCGTTTCCGCTCAGTCA 60.039 55.000 0.00 0.00 0.00 3.41
3473 8062 0.888619 TCTCGTTTCCGCTCAGTCAT 59.111 50.000 0.00 0.00 0.00 3.06
3474 8063 1.135373 TCTCGTTTCCGCTCAGTCATC 60.135 52.381 0.00 0.00 0.00 2.92
3475 8064 0.601057 TCGTTTCCGCTCAGTCATCA 59.399 50.000 0.00 0.00 0.00 3.07
3476 8065 0.716108 CGTTTCCGCTCAGTCATCAC 59.284 55.000 0.00 0.00 0.00 3.06
3477 8066 1.670087 CGTTTCCGCTCAGTCATCACT 60.670 52.381 0.00 0.00 0.00 3.41
3488 8077 4.028825 TCAGTCATCACTCATCAGGATGT 58.971 43.478 8.97 0.00 39.47 3.06
3490 8079 5.301298 TCAGTCATCACTCATCAGGATGTAG 59.699 44.000 8.97 7.82 39.47 2.74
3536 8125 1.981636 CAGAGAGGCTTCCACTGCT 59.018 57.895 7.47 0.00 0.00 4.24
3561 8150 0.251787 AACTTCACCATCCTTGCCCC 60.252 55.000 0.00 0.00 0.00 5.80
3562 8151 1.750399 CTTCACCATCCTTGCCCCG 60.750 63.158 0.00 0.00 0.00 5.73
3575 8164 0.760945 TGCCCCGGGTTGTTTTCATT 60.761 50.000 21.85 0.00 0.00 2.57
3580 8169 2.625790 CCCGGGTTGTTTTCATTCTTGA 59.374 45.455 14.18 0.00 0.00 3.02
3587 8176 5.395214 GGTTGTTTTCATTCTTGACCACCTT 60.395 40.000 0.00 0.00 0.00 3.50
3594 8183 1.208706 TCTTGACCACCTTGACACCA 58.791 50.000 0.00 0.00 0.00 4.17
3601 8190 3.573967 GACCACCTTGACACCATGAAAAT 59.426 43.478 0.00 0.00 0.00 1.82
3614 8203 4.764823 ACCATGAAAATAAAGAGCGTTCCA 59.235 37.500 0.00 0.00 0.00 3.53
3616 8205 5.801947 CCATGAAAATAAAGAGCGTTCCAAG 59.198 40.000 0.00 0.00 0.00 3.61
3617 8206 5.371115 TGAAAATAAAGAGCGTTCCAAGG 57.629 39.130 0.00 0.00 0.00 3.61
3639 8228 1.300620 CCGTCAGAACCGAACAGCA 60.301 57.895 0.00 0.00 0.00 4.41
3642 8231 1.301716 TCAGAACCGAACAGCAGCC 60.302 57.895 0.00 0.00 0.00 4.85
3658 8247 2.202623 CCGGAGAGGCGACTTTCG 60.203 66.667 2.21 2.37 42.34 3.46
3659 8248 2.202623 CGGAGAGGCGACTTTCGG 60.203 66.667 2.21 2.01 42.34 4.30
3660 8249 2.697761 CGGAGAGGCGACTTTCGGA 61.698 63.158 10.53 0.00 42.37 4.55
3661 8250 1.139947 GGAGAGGCGACTTTCGGAG 59.860 63.158 2.21 0.00 42.34 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.153706 GCATGTGATGGCAACCAGC 60.154 57.895 0.00 0.00 40.77 4.85
135 1657 0.257905 GGGAAAGGCGAATTAGGGGT 59.742 55.000 0.00 0.00 0.00 4.95
137 1659 2.298610 GAAGGGAAAGGCGAATTAGGG 58.701 52.381 0.00 0.00 0.00 3.53
152 1674 7.054124 TGCTTGTCATACTAAATTAGGAAGGG 58.946 38.462 4.92 0.00 0.00 3.95
177 1701 5.363562 TCAGACCAGCTCATCATTTGTAT 57.636 39.130 0.00 0.00 0.00 2.29
178 1702 4.824479 TCAGACCAGCTCATCATTTGTA 57.176 40.909 0.00 0.00 0.00 2.41
205 1731 0.249120 TGAAGGTACGTGCTGGATGG 59.751 55.000 3.01 0.00 0.00 3.51
251 1785 5.107875 GCGCAAGGAACAAACAAATTAAGAG 60.108 40.000 0.30 0.00 38.28 2.85
325 1874 3.431856 CCATTCTGATTGTCATGTTGCG 58.568 45.455 0.00 0.00 0.00 4.85
348 1898 7.412137 ACCACACTATCAAGTAAACGTAAAC 57.588 36.000 0.00 0.00 33.48 2.01
353 1903 7.533426 AGTAGTACCACACTATCAAGTAAACG 58.467 38.462 0.00 0.00 41.77 3.60
370 1920 3.628487 AGAGCAACTGATCGAGTAGTACC 59.372 47.826 4.95 0.77 35.26 3.34
371 1921 4.886247 AGAGCAACTGATCGAGTAGTAC 57.114 45.455 4.95 0.00 35.26 2.73
441 2260 2.634940 CCCAACTCTGAAGGAAGTGAGA 59.365 50.000 0.00 0.00 0.00 3.27
495 2316 6.570378 GCACAACCTAATTGCAAAGTACTGAT 60.570 38.462 1.71 0.00 42.62 2.90
499 2325 3.911964 CGCACAACCTAATTGCAAAGTAC 59.088 43.478 1.71 0.00 42.62 2.73
504 2330 2.359214 TGAACGCACAACCTAATTGCAA 59.641 40.909 0.00 0.00 42.62 4.08
515 2344 4.640789 ATTAAACAAGGTGAACGCACAA 57.359 36.364 0.00 0.00 46.96 3.33
521 2350 7.375017 CAGTAACGACAATTAAACAAGGTGAAC 59.625 37.037 0.00 0.00 0.00 3.18
894 2731 2.468301 TCCAGAGCTTGCTATCCTCT 57.532 50.000 0.00 0.00 36.43 3.69
924 2761 1.530013 CCTGCACCAAAAGGCTGAGG 61.530 60.000 0.00 0.00 0.00 3.86
927 2764 1.662044 GACCTGCACCAAAAGGCTG 59.338 57.895 0.00 0.00 37.03 4.85
1038 2875 4.446371 CACATGTTCTCTCCCCATACTTC 58.554 47.826 0.00 0.00 0.00 3.01
1053 2890 1.568612 CGAACCAGAGCGCACATGTT 61.569 55.000 11.47 11.00 0.00 2.71
1108 2945 1.459592 GTGATGCTTGTCACGTGGTAC 59.540 52.381 17.00 8.15 39.12 3.34
1152 3058 2.576317 GAGTCGTCGTAGCCGTGC 60.576 66.667 0.00 0.00 35.01 5.34
1299 3211 0.321564 CACGGTCTTTCATGAGGCCA 60.322 55.000 5.01 0.00 41.62 5.36
1332 3244 2.037901 GAGAGCTCCATCTCCATCACA 58.962 52.381 10.93 0.00 39.93 3.58
1395 3307 2.356665 TGCAGTAGCCAAACCAAGAA 57.643 45.000 0.00 0.00 41.13 2.52
1651 3563 1.515521 CCAAGTCTGTGGCGAAACCC 61.516 60.000 0.00 0.00 37.83 4.11
1787 3699 1.965754 ATTGCCGAGCTGGAGACTCC 61.966 60.000 15.13 15.13 42.00 3.85
1793 3705 1.271325 TGAAAAGATTGCCGAGCTGGA 60.271 47.619 0.00 0.00 42.00 3.86
1850 3762 2.234908 ACCTCAACAGTCCATGAGTAGC 59.765 50.000 0.00 0.00 41.16 3.58
1900 3813 2.092323 TGAGACTATGTCGTCCACCTG 58.908 52.381 0.00 0.00 37.67 4.00
1922 3837 3.957497 GCCCATTGTGTTTATATCACCCA 59.043 43.478 6.25 0.00 35.25 4.51
1963 3878 1.061131 CTCACTCAGCGCCATTTTACG 59.939 52.381 2.29 0.00 0.00 3.18
2018 4133 0.807496 GAAGTCAACTCCATGCCAGC 59.193 55.000 0.00 0.00 0.00 4.85
2307 4434 2.747022 CGGTGATGGTGTGGTCCA 59.253 61.111 0.00 0.00 42.01 4.02
2559 4692 0.468226 TCAACTCACCTCCGCTGTTT 59.532 50.000 0.00 0.00 0.00 2.83
2568 4701 0.249489 GCACAGTCGTCAACTCACCT 60.249 55.000 0.00 0.00 35.45 4.00
2618 4751 8.141268 CCTTTGTTGCATCTCCTTTTAGTTTTA 58.859 33.333 0.00 0.00 0.00 1.52
2619 4752 6.986231 CCTTTGTTGCATCTCCTTTTAGTTTT 59.014 34.615 0.00 0.00 0.00 2.43
2620 4753 6.098266 ACCTTTGTTGCATCTCCTTTTAGTTT 59.902 34.615 0.00 0.00 0.00 2.66
2621 4754 5.598417 ACCTTTGTTGCATCTCCTTTTAGTT 59.402 36.000 0.00 0.00 0.00 2.24
2622 4755 5.140454 ACCTTTGTTGCATCTCCTTTTAGT 58.860 37.500 0.00 0.00 0.00 2.24
2623 4756 5.712152 ACCTTTGTTGCATCTCCTTTTAG 57.288 39.130 0.00 0.00 0.00 1.85
2672 4805 1.537202 GCAAAGGCCACTAGTCAACTG 59.463 52.381 5.01 0.00 0.00 3.16
2754 5107 6.127619 TGTGAGATACTCAGTCATAACCTGTG 60.128 42.308 1.53 0.00 41.46 3.66
2778 5133 8.954950 ATGGATTTCAAGTAGACAAGATAGTG 57.045 34.615 0.00 0.00 0.00 2.74
2791 5146 3.686726 GCGAGACAGAATGGATTTCAAGT 59.313 43.478 0.00 0.00 43.62 3.16
2798 5153 2.504920 TCGGCGAGACAGAATGGAT 58.495 52.632 4.99 0.00 43.62 3.41
2812 5167 1.226888 GGTACTGGATGACGTCGGC 60.227 63.158 11.62 4.95 0.00 5.54
2816 5171 1.601419 CGGTGGGTACTGGATGACGT 61.601 60.000 0.00 0.00 0.00 4.34
2826 5181 1.878102 GCATCATGGATCGGTGGGTAC 60.878 57.143 0.00 0.00 0.00 3.34
2829 5184 0.887836 CTGCATCATGGATCGGTGGG 60.888 60.000 0.00 0.00 0.00 4.61
2833 5188 0.250166 TCAGCTGCATCATGGATCGG 60.250 55.000 9.47 0.00 0.00 4.18
2842 5197 1.202154 GCACAATCTGTCAGCTGCATC 60.202 52.381 9.47 2.59 0.00 3.91
2843 5198 0.809385 GCACAATCTGTCAGCTGCAT 59.191 50.000 9.47 0.00 0.00 3.96
2846 5201 1.520494 ACAGCACAATCTGTCAGCTG 58.480 50.000 7.63 7.63 46.52 4.24
2849 5204 4.060900 ACAAGTACAGCACAATCTGTCAG 58.939 43.478 0.00 0.00 45.32 3.51
2850 5205 4.071961 ACAAGTACAGCACAATCTGTCA 57.928 40.909 0.00 0.00 45.32 3.58
2908 5286 7.175641 AGCAGAAAACATGTAGAAGCTTACAAT 59.824 33.333 6.17 0.00 37.13 2.71
2944 5322 1.302431 CACCTGATTCCGGCACACA 60.302 57.895 0.00 0.00 0.00 3.72
2967 5345 4.489810 CTGAGTGCCAGTACAGTAAAGAG 58.510 47.826 0.00 0.00 38.10 2.85
2968 5346 3.306088 GCTGAGTGCCAGTACAGTAAAGA 60.306 47.826 0.00 0.00 44.71 2.52
2969 5347 2.996621 GCTGAGTGCCAGTACAGTAAAG 59.003 50.000 0.00 0.00 44.71 1.85
2970 5348 2.632996 AGCTGAGTGCCAGTACAGTAAA 59.367 45.455 0.00 0.00 44.71 2.01
2971 5349 2.029020 CAGCTGAGTGCCAGTACAGTAA 60.029 50.000 8.42 0.00 44.71 2.24
2972 5350 1.546029 CAGCTGAGTGCCAGTACAGTA 59.454 52.381 8.42 0.00 44.71 2.74
2973 5351 0.319728 CAGCTGAGTGCCAGTACAGT 59.680 55.000 8.42 0.00 44.71 3.55
2974 5352 1.018226 GCAGCTGAGTGCCAGTACAG 61.018 60.000 20.43 0.00 44.71 2.74
2975 5353 1.004560 GCAGCTGAGTGCCAGTACA 60.005 57.895 20.43 0.00 44.71 2.90
2976 5354 3.882025 GCAGCTGAGTGCCAGTAC 58.118 61.111 20.43 0.00 44.71 2.73
2982 5360 1.860484 GAAACCTGGCAGCTGAGTGC 61.860 60.000 20.43 1.60 43.19 4.40
2983 5361 0.535780 TGAAACCTGGCAGCTGAGTG 60.536 55.000 20.43 5.57 0.00 3.51
2984 5362 0.250640 CTGAAACCTGGCAGCTGAGT 60.251 55.000 20.43 5.55 0.00 3.41
2985 5363 0.250640 ACTGAAACCTGGCAGCTGAG 60.251 55.000 20.43 6.68 35.57 3.35
2986 5364 0.535780 CACTGAAACCTGGCAGCTGA 60.536 55.000 20.43 0.00 35.57 4.26
2987 5365 1.954528 CACTGAAACCTGGCAGCTG 59.045 57.895 10.11 10.11 35.57 4.24
2988 5366 1.900498 GCACTGAAACCTGGCAGCT 60.900 57.895 9.56 0.00 35.57 4.24
2989 5367 2.195567 TGCACTGAAACCTGGCAGC 61.196 57.895 9.56 0.00 35.57 5.25
2990 5368 1.102809 TGTGCACTGAAACCTGGCAG 61.103 55.000 19.41 7.75 34.78 4.85
2991 5369 0.467844 ATGTGCACTGAAACCTGGCA 60.468 50.000 19.41 0.00 0.00 4.92
2992 5370 0.242017 GATGTGCACTGAAACCTGGC 59.758 55.000 19.41 0.00 0.00 4.85
2993 5371 0.883833 GGATGTGCACTGAAACCTGG 59.116 55.000 19.41 0.00 0.00 4.45
2994 5372 0.883833 GGGATGTGCACTGAAACCTG 59.116 55.000 19.41 0.00 0.00 4.00
2995 5373 0.251341 GGGGATGTGCACTGAAACCT 60.251 55.000 19.41 0.00 0.00 3.50
2996 5374 0.251341 AGGGGATGTGCACTGAAACC 60.251 55.000 19.41 13.40 0.00 3.27
2997 5375 0.883833 CAGGGGATGTGCACTGAAAC 59.116 55.000 19.41 5.88 32.86 2.78
2998 5376 0.478072 ACAGGGGATGTGCACTGAAA 59.522 50.000 19.41 0.00 41.91 2.69
2999 5377 2.154139 ACAGGGGATGTGCACTGAA 58.846 52.632 19.41 0.00 41.91 3.02
3000 5378 3.905454 ACAGGGGATGTGCACTGA 58.095 55.556 19.41 0.00 41.91 3.41
3007 5385 1.899437 AATCGCGTCACAGGGGATGT 61.899 55.000 5.77 0.00 45.43 3.06
3008 5386 1.153369 AATCGCGTCACAGGGGATG 60.153 57.895 5.77 0.00 36.11 3.51
3009 5387 1.144057 GAATCGCGTCACAGGGGAT 59.856 57.895 5.77 0.00 37.27 3.85
3010 5388 2.577059 GAATCGCGTCACAGGGGA 59.423 61.111 5.77 0.00 0.00 4.81
3011 5389 2.511600 GGAATCGCGTCACAGGGG 60.512 66.667 5.77 0.00 0.00 4.79
3012 5390 1.811266 CTGGAATCGCGTCACAGGG 60.811 63.158 5.77 0.00 0.00 4.45
3013 5391 1.811266 CCTGGAATCGCGTCACAGG 60.811 63.158 20.62 20.62 42.28 4.00
3014 5392 1.078759 GACCTGGAATCGCGTCACAG 61.079 60.000 5.77 10.64 0.00 3.66
3015 5393 1.080093 GACCTGGAATCGCGTCACA 60.080 57.895 5.77 0.40 0.00 3.58
3016 5394 1.078759 CAGACCTGGAATCGCGTCAC 61.079 60.000 5.77 0.00 0.00 3.67
3017 5395 1.215382 CAGACCTGGAATCGCGTCA 59.785 57.895 5.77 0.00 0.00 4.35
3018 5396 2.167861 GCAGACCTGGAATCGCGTC 61.168 63.158 5.77 0.00 0.00 5.19
3019 5397 2.125512 GCAGACCTGGAATCGCGT 60.126 61.111 5.77 0.00 0.00 6.01
3020 5398 2.169789 CAGCAGACCTGGAATCGCG 61.170 63.158 0.00 0.00 37.93 5.87
3021 5399 3.805267 CAGCAGACCTGGAATCGC 58.195 61.111 0.00 0.00 37.93 4.58
3028 5406 1.665916 CACGACACCAGCAGACCTG 60.666 63.158 0.00 0.00 41.41 4.00
3029 5407 2.737180 CACGACACCAGCAGACCT 59.263 61.111 0.00 0.00 0.00 3.85
3030 5408 3.044305 GCACGACACCAGCAGACC 61.044 66.667 0.00 0.00 0.00 3.85
3031 5409 2.029666 AGCACGACACCAGCAGAC 59.970 61.111 0.00 0.00 0.00 3.51
3032 5410 2.029518 CAGCACGACACCAGCAGA 59.970 61.111 0.00 0.00 0.00 4.26
3033 5411 3.720193 GCAGCACGACACCAGCAG 61.720 66.667 0.00 0.00 0.00 4.24
3043 5421 0.725784 GGACAAACAATCGCAGCACG 60.726 55.000 0.00 0.00 45.62 5.34
3044 5422 0.593128 AGGACAAACAATCGCAGCAC 59.407 50.000 0.00 0.00 0.00 4.40
3045 5423 2.076100 CTAGGACAAACAATCGCAGCA 58.924 47.619 0.00 0.00 0.00 4.41
3046 5424 2.076863 ACTAGGACAAACAATCGCAGC 58.923 47.619 0.00 0.00 0.00 5.25
3047 5425 3.303495 CGTACTAGGACAAACAATCGCAG 59.697 47.826 5.80 0.00 0.00 5.18
3048 5426 3.057386 TCGTACTAGGACAAACAATCGCA 60.057 43.478 5.80 0.00 0.00 5.10
3049 5427 3.504863 TCGTACTAGGACAAACAATCGC 58.495 45.455 5.80 0.00 0.00 4.58
3050 5428 4.436847 CGATCGTACTAGGACAAACAATCG 59.563 45.833 7.03 7.51 0.00 3.34
3051 5429 5.454877 GTCGATCGTACTAGGACAAACAATC 59.545 44.000 15.94 0.00 0.00 2.67
3052 5430 5.125097 AGTCGATCGTACTAGGACAAACAAT 59.875 40.000 15.94 0.00 0.00 2.71
3053 5431 4.456911 AGTCGATCGTACTAGGACAAACAA 59.543 41.667 15.94 0.00 0.00 2.83
3054 5432 4.005650 AGTCGATCGTACTAGGACAAACA 58.994 43.478 15.94 0.00 0.00 2.83
3055 5433 4.341099 CAGTCGATCGTACTAGGACAAAC 58.659 47.826 15.94 0.87 0.00 2.93
3056 5434 3.181503 GCAGTCGATCGTACTAGGACAAA 60.182 47.826 15.94 0.00 0.00 2.83
3057 5435 2.353889 GCAGTCGATCGTACTAGGACAA 59.646 50.000 15.94 0.00 0.00 3.18
3058 5436 1.938577 GCAGTCGATCGTACTAGGACA 59.061 52.381 15.94 0.00 0.00 4.02
3059 5437 1.263752 GGCAGTCGATCGTACTAGGAC 59.736 57.143 15.94 3.77 0.00 3.85
3060 5438 1.590932 GGCAGTCGATCGTACTAGGA 58.409 55.000 15.94 0.00 0.00 2.94
3061 5439 0.592148 GGGCAGTCGATCGTACTAGG 59.408 60.000 15.94 7.63 0.00 3.02
3062 5440 0.592148 GGGGCAGTCGATCGTACTAG 59.408 60.000 15.94 12.00 0.00 2.57
3063 5441 0.182061 AGGGGCAGTCGATCGTACTA 59.818 55.000 15.94 0.00 0.00 1.82
3064 5442 0.683504 AAGGGGCAGTCGATCGTACT 60.684 55.000 15.94 13.90 0.00 2.73
3065 5443 0.248949 GAAGGGGCAGTCGATCGTAC 60.249 60.000 15.94 11.83 0.00 3.67
3066 5444 0.681887 TGAAGGGGCAGTCGATCGTA 60.682 55.000 15.94 0.00 0.00 3.43
3067 5445 1.949847 CTGAAGGGGCAGTCGATCGT 61.950 60.000 15.94 0.00 0.00 3.73
3068 5446 1.227089 CTGAAGGGGCAGTCGATCG 60.227 63.158 9.36 9.36 0.00 3.69
3069 5447 1.144936 CCTGAAGGGGCAGTCGATC 59.855 63.158 0.00 0.00 34.06 3.69
3070 5448 1.613630 ACCTGAAGGGGCAGTCGAT 60.614 57.895 0.56 0.00 40.27 3.59
3071 5449 2.203788 ACCTGAAGGGGCAGTCGA 60.204 61.111 0.56 0.00 40.27 4.20
3072 5450 2.266055 GACCTGAAGGGGCAGTCG 59.734 66.667 0.56 0.00 44.40 4.18
3077 5455 2.270527 GAGCTGACCTGAAGGGGC 59.729 66.667 0.00 2.58 45.52 5.80
3078 5456 2.581354 CGAGCTGACCTGAAGGGG 59.419 66.667 0.00 0.00 40.27 4.79
3079 5457 2.125350 GCGAGCTGACCTGAAGGG 60.125 66.667 0.00 0.00 40.27 3.95
3080 5458 2.507992 CGCGAGCTGACCTGAAGG 60.508 66.667 0.00 0.00 42.17 3.46
3081 5459 2.507992 CCGCGAGCTGACCTGAAG 60.508 66.667 8.23 0.00 0.00 3.02
3082 5460 4.069232 CCCGCGAGCTGACCTGAA 62.069 66.667 8.23 0.00 0.00 3.02
3084 5462 3.883744 AAACCCGCGAGCTGACCTG 62.884 63.158 8.23 0.00 0.00 4.00
3085 5463 3.626924 AAACCCGCGAGCTGACCT 61.627 61.111 8.23 0.00 0.00 3.85
3086 5464 3.423154 CAAACCCGCGAGCTGACC 61.423 66.667 8.23 0.00 0.00 4.02
3087 5465 2.251642 AACAAACCCGCGAGCTGAC 61.252 57.895 8.23 0.00 0.00 3.51
3088 5466 2.110213 AACAAACCCGCGAGCTGA 59.890 55.556 8.23 0.00 0.00 4.26
3089 5467 2.058829 AACAACAAACCCGCGAGCTG 62.059 55.000 8.23 0.00 0.00 4.24
3090 5468 1.381165 AAACAACAAACCCGCGAGCT 61.381 50.000 8.23 0.00 0.00 4.09
3091 5469 0.933047 GAAACAACAAACCCGCGAGC 60.933 55.000 8.23 0.00 0.00 5.03
3092 5470 0.317519 GGAAACAACAAACCCGCGAG 60.318 55.000 8.23 0.00 0.00 5.03
3093 5471 1.030488 TGGAAACAACAAACCCGCGA 61.030 50.000 8.23 0.00 37.44 5.87
3094 5472 0.593773 CTGGAAACAACAAACCCGCG 60.594 55.000 0.00 0.00 42.06 6.46
3095 5473 0.249280 CCTGGAAACAACAAACCCGC 60.249 55.000 0.00 0.00 42.06 6.13
3096 5474 1.107945 ACCTGGAAACAACAAACCCG 58.892 50.000 0.00 0.00 42.06 5.28
3097 5475 3.266636 CAAACCTGGAAACAACAAACCC 58.733 45.455 0.00 0.00 42.06 4.11
3098 5476 3.930229 GACAAACCTGGAAACAACAAACC 59.070 43.478 0.00 0.00 42.06 3.27
3099 5477 3.930229 GGACAAACCTGGAAACAACAAAC 59.070 43.478 0.00 0.00 42.06 2.93
3100 5478 4.195225 GGACAAACCTGGAAACAACAAA 57.805 40.909 0.00 0.00 42.06 2.83
3101 5479 3.878160 GGACAAACCTGGAAACAACAA 57.122 42.857 0.00 0.00 42.06 2.83
3113 5491 2.558359 CCAATGGAGAACAGGACAAACC 59.442 50.000 0.00 0.00 39.35 3.27
3114 5492 2.029918 GCCAATGGAGAACAGGACAAAC 60.030 50.000 2.05 0.00 0.00 2.93
3115 5493 2.158475 AGCCAATGGAGAACAGGACAAA 60.158 45.455 2.05 0.00 0.00 2.83
3116 5494 1.425066 AGCCAATGGAGAACAGGACAA 59.575 47.619 2.05 0.00 0.00 3.18
3117 5495 1.003580 GAGCCAATGGAGAACAGGACA 59.996 52.381 2.05 0.00 0.00 4.02
3118 5496 1.280421 AGAGCCAATGGAGAACAGGAC 59.720 52.381 2.05 0.00 0.00 3.85
3119 5497 1.556911 GAGAGCCAATGGAGAACAGGA 59.443 52.381 2.05 0.00 0.00 3.86
3120 5498 1.558756 AGAGAGCCAATGGAGAACAGG 59.441 52.381 2.05 0.00 0.00 4.00
3121 5499 2.027377 ACAGAGAGCCAATGGAGAACAG 60.027 50.000 2.05 0.00 0.00 3.16
3122 5500 1.980765 ACAGAGAGCCAATGGAGAACA 59.019 47.619 2.05 0.00 0.00 3.18
3123 5501 2.289945 ACACAGAGAGCCAATGGAGAAC 60.290 50.000 2.05 0.00 0.00 3.01
3124 5502 1.980765 ACACAGAGAGCCAATGGAGAA 59.019 47.619 2.05 0.00 0.00 2.87
3125 5503 1.649321 ACACAGAGAGCCAATGGAGA 58.351 50.000 2.05 0.00 0.00 3.71
3126 5504 2.082231 CAACACAGAGAGCCAATGGAG 58.918 52.381 2.05 0.00 0.00 3.86
3127 5505 1.421268 ACAACACAGAGAGCCAATGGA 59.579 47.619 2.05 0.00 0.00 3.41
3128 5506 1.901591 ACAACACAGAGAGCCAATGG 58.098 50.000 0.00 0.00 0.00 3.16
3129 5507 4.940046 AGATAACAACACAGAGAGCCAATG 59.060 41.667 0.00 0.00 0.00 2.82
3130 5508 4.940046 CAGATAACAACACAGAGAGCCAAT 59.060 41.667 0.00 0.00 0.00 3.16
3131 5509 4.202357 ACAGATAACAACACAGAGAGCCAA 60.202 41.667 0.00 0.00 0.00 4.52
3132 5510 3.324846 ACAGATAACAACACAGAGAGCCA 59.675 43.478 0.00 0.00 0.00 4.75
3133 5511 3.931578 ACAGATAACAACACAGAGAGCC 58.068 45.455 0.00 0.00 0.00 4.70
3134 5512 5.955488 TCTACAGATAACAACACAGAGAGC 58.045 41.667 0.00 0.00 0.00 4.09
3135 5513 6.033341 GCTCTACAGATAACAACACAGAGAG 58.967 44.000 0.00 0.00 31.92 3.20
3136 5514 5.392057 CGCTCTACAGATAACAACACAGAGA 60.392 44.000 0.00 0.00 31.92 3.10
3137 5515 4.795795 CGCTCTACAGATAACAACACAGAG 59.204 45.833 0.00 0.00 33.12 3.35
3138 5516 4.217767 ACGCTCTACAGATAACAACACAGA 59.782 41.667 0.00 0.00 0.00 3.41
3139 5517 4.324669 CACGCTCTACAGATAACAACACAG 59.675 45.833 0.00 0.00 0.00 3.66
3140 5518 4.234574 CACGCTCTACAGATAACAACACA 58.765 43.478 0.00 0.00 0.00 3.72
3141 5519 4.090066 CACACGCTCTACAGATAACAACAC 59.910 45.833 0.00 0.00 0.00 3.32
3142 5520 4.234574 CACACGCTCTACAGATAACAACA 58.765 43.478 0.00 0.00 0.00 3.33
3143 5521 4.235360 ACACACGCTCTACAGATAACAAC 58.765 43.478 0.00 0.00 0.00 3.32
3144 5522 4.482386 GACACACGCTCTACAGATAACAA 58.518 43.478 0.00 0.00 0.00 2.83
3145 5523 3.119602 GGACACACGCTCTACAGATAACA 60.120 47.826 0.00 0.00 0.00 2.41
3146 5524 3.128938 AGGACACACGCTCTACAGATAAC 59.871 47.826 0.00 0.00 0.00 1.89
3147 5525 3.128764 CAGGACACACGCTCTACAGATAA 59.871 47.826 0.00 0.00 0.00 1.75
3148 5526 2.683362 CAGGACACACGCTCTACAGATA 59.317 50.000 0.00 0.00 0.00 1.98
3149 5527 1.474478 CAGGACACACGCTCTACAGAT 59.526 52.381 0.00 0.00 0.00 2.90
3150 5528 0.881796 CAGGACACACGCTCTACAGA 59.118 55.000 0.00 0.00 0.00 3.41
3151 5529 0.598562 ACAGGACACACGCTCTACAG 59.401 55.000 0.00 0.00 0.00 2.74
3152 5530 0.313987 CACAGGACACACGCTCTACA 59.686 55.000 0.00 0.00 0.00 2.74
3153 5531 1.009389 GCACAGGACACACGCTCTAC 61.009 60.000 0.00 0.00 0.00 2.59
3154 5532 1.289066 GCACAGGACACACGCTCTA 59.711 57.895 0.00 0.00 0.00 2.43
3155 5533 2.029666 GCACAGGACACACGCTCT 59.970 61.111 0.00 0.00 0.00 4.09
3156 5534 1.230635 ATTGCACAGGACACACGCTC 61.231 55.000 0.00 0.00 0.00 5.03
3157 5535 1.227943 ATTGCACAGGACACACGCT 60.228 52.632 0.00 0.00 0.00 5.07
3158 5536 1.081906 CATTGCACAGGACACACGC 60.082 57.895 0.00 0.00 0.00 5.34
3159 5537 0.235665 GTCATTGCACAGGACACACG 59.764 55.000 6.69 0.00 0.00 4.49
3160 5538 1.532868 GAGTCATTGCACAGGACACAC 59.467 52.381 12.50 2.62 34.04 3.82
3161 5539 1.140652 TGAGTCATTGCACAGGACACA 59.859 47.619 12.50 9.89 34.04 3.72
3162 5540 1.802960 CTGAGTCATTGCACAGGACAC 59.197 52.381 12.50 7.82 34.04 3.67
3163 5541 1.417517 ACTGAGTCATTGCACAGGACA 59.582 47.619 12.50 0.00 35.08 4.02
3164 5542 1.802960 CACTGAGTCATTGCACAGGAC 59.197 52.381 0.00 4.43 35.08 3.85
3165 5543 1.693606 TCACTGAGTCATTGCACAGGA 59.306 47.619 5.63 0.00 35.08 3.86
3166 5544 2.174363 TCACTGAGTCATTGCACAGG 57.826 50.000 5.63 0.00 35.08 4.00
3167 5545 2.874086 TGTTCACTGAGTCATTGCACAG 59.126 45.455 11.00 0.00 36.58 3.66
3168 5546 2.916640 TGTTCACTGAGTCATTGCACA 58.083 42.857 11.00 11.00 0.00 4.57
3169 5547 3.969117 TTGTTCACTGAGTCATTGCAC 57.031 42.857 5.63 6.02 0.00 4.57
3170 5548 5.518848 AATTTGTTCACTGAGTCATTGCA 57.481 34.783 5.63 0.00 0.00 4.08
3171 5549 5.750067 ACAAATTTGTTCACTGAGTCATTGC 59.250 36.000 18.13 0.00 38.47 3.56
3172 5550 6.753279 ACACAAATTTGTTCACTGAGTCATTG 59.247 34.615 21.10 7.48 39.91 2.82
3173 5551 6.866480 ACACAAATTTGTTCACTGAGTCATT 58.134 32.000 21.10 0.00 39.91 2.57
3174 5552 6.455360 ACACAAATTTGTTCACTGAGTCAT 57.545 33.333 21.10 0.00 39.91 3.06
3175 5553 5.895636 ACACAAATTTGTTCACTGAGTCA 57.104 34.783 21.10 0.00 39.91 3.41
3176 5554 6.092748 ACAACACAAATTTGTTCACTGAGTC 58.907 36.000 21.10 0.00 39.91 3.36
3177 5555 6.024552 ACAACACAAATTTGTTCACTGAGT 57.975 33.333 21.10 11.20 39.91 3.41
3178 5556 7.701924 ACATACAACACAAATTTGTTCACTGAG 59.298 33.333 21.10 10.58 39.91 3.35
3179 5557 7.542890 ACATACAACACAAATTTGTTCACTGA 58.457 30.769 21.10 6.13 39.91 3.41
3180 5558 7.754069 ACATACAACACAAATTTGTTCACTG 57.246 32.000 21.10 16.32 39.91 3.66
3181 5559 8.655092 CAAACATACAACACAAATTTGTTCACT 58.345 29.630 21.10 7.23 39.91 3.41
3182 5560 7.425023 GCAAACATACAACACAAATTTGTTCAC 59.575 33.333 21.10 0.00 39.91 3.18
3183 5561 7.118245 TGCAAACATACAACACAAATTTGTTCA 59.882 29.630 21.10 5.47 39.91 3.18
3184 5562 7.425023 GTGCAAACATACAACACAAATTTGTTC 59.575 33.333 21.10 0.00 39.91 3.18
3185 5563 7.095060 TGTGCAAACATACAACACAAATTTGTT 60.095 29.630 21.10 9.58 39.91 2.83
3186 5564 6.369890 TGTGCAAACATACAACACAAATTTGT 59.630 30.769 18.13 18.13 43.36 2.83
3187 5565 6.769076 TGTGCAAACATACAACACAAATTTG 58.231 32.000 16.67 16.67 38.24 2.32
3188 5566 6.036953 CCTGTGCAAACATACAACACAAATTT 59.963 34.615 0.00 0.00 40.45 1.82
3189 5567 5.523188 CCTGTGCAAACATACAACACAAATT 59.477 36.000 0.00 0.00 40.45 1.82
3190 5568 5.049167 CCTGTGCAAACATACAACACAAAT 58.951 37.500 0.00 0.00 40.45 2.32
3191 5569 4.081972 ACCTGTGCAAACATACAACACAAA 60.082 37.500 0.00 0.00 40.45 2.83
3192 5570 3.445450 ACCTGTGCAAACATACAACACAA 59.555 39.130 0.00 0.00 40.45 3.33
3193 5571 3.020274 ACCTGTGCAAACATACAACACA 58.980 40.909 0.00 0.00 38.83 3.72
3194 5572 3.181491 ACACCTGTGCAAACATACAACAC 60.181 43.478 0.00 0.00 0.00 3.32
3195 5573 3.020274 ACACCTGTGCAAACATACAACA 58.980 40.909 0.00 0.00 0.00 3.33
3196 5574 3.315191 AGACACCTGTGCAAACATACAAC 59.685 43.478 0.00 0.00 0.00 3.32
3197 5575 3.314913 CAGACACCTGTGCAAACATACAA 59.685 43.478 0.00 0.00 35.70 2.41
3198 5576 2.877786 CAGACACCTGTGCAAACATACA 59.122 45.455 0.00 0.00 35.70 2.29
3215 5593 1.592081 GAGATCATCGCTGCAACAGAC 59.408 52.381 0.00 0.00 32.44 3.51
3221 5600 0.248784 CGTCAGAGATCATCGCTGCA 60.249 55.000 13.28 0.59 42.82 4.41
3235 5614 9.993881 GTTTTTGAACATCATAATTTTCGTCAG 57.006 29.630 0.00 0.00 0.00 3.51
3247 5626 8.859090 TGTCCTAAATCTGTTTTTGAACATCAT 58.141 29.630 0.00 0.00 31.47 2.45
3251 5630 8.690884 TCATTGTCCTAAATCTGTTTTTGAACA 58.309 29.630 0.00 0.00 0.00 3.18
3256 5637 8.250143 ACCTTCATTGTCCTAAATCTGTTTTT 57.750 30.769 0.00 0.00 0.00 1.94
3261 5642 6.881065 TCAAGACCTTCATTGTCCTAAATCTG 59.119 38.462 0.00 0.00 33.09 2.90
3266 5647 4.287067 AGCTCAAGACCTTCATTGTCCTAA 59.713 41.667 0.00 0.00 33.09 2.69
3267 5648 3.840666 AGCTCAAGACCTTCATTGTCCTA 59.159 43.478 0.00 0.00 33.09 2.94
3269 5650 2.746362 CAGCTCAAGACCTTCATTGTCC 59.254 50.000 0.00 0.00 33.09 4.02
3272 5653 3.405831 TGACAGCTCAAGACCTTCATTG 58.594 45.455 0.00 0.00 0.00 2.82
3273 5654 3.558746 CCTGACAGCTCAAGACCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
3274 5655 2.027377 CCTGACAGCTCAAGACCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
3275 5656 1.345741 CCTGACAGCTCAAGACCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
3281 5662 1.123861 AGTGCCCTGACAGCTCAAGA 61.124 55.000 0.00 0.00 0.00 3.02
3282 5663 0.954449 CAGTGCCCTGACAGCTCAAG 60.954 60.000 0.00 0.00 41.50 3.02
3283 5664 1.071987 CAGTGCCCTGACAGCTCAA 59.928 57.895 0.00 0.00 41.50 3.02
3286 5667 3.247648 AGCAGTGCCCTGACAGCT 61.248 61.111 12.58 0.00 41.50 4.24
3287 5668 3.054503 CAGCAGTGCCCTGACAGC 61.055 66.667 12.58 0.00 41.50 4.40
3288 5669 1.670406 GACAGCAGTGCCCTGACAG 60.670 63.158 12.58 0.00 41.50 3.51
3289 5670 2.427320 GACAGCAGTGCCCTGACA 59.573 61.111 12.58 0.00 41.50 3.58
3290 5671 2.154798 TACGACAGCAGTGCCCTGAC 62.155 60.000 12.58 4.11 41.50 3.51
3291 5672 1.257750 ATACGACAGCAGTGCCCTGA 61.258 55.000 12.58 0.00 41.50 3.86
3292 5673 1.086067 CATACGACAGCAGTGCCCTG 61.086 60.000 12.58 7.20 41.91 4.45
3293 5674 1.219124 CATACGACAGCAGTGCCCT 59.781 57.895 12.58 0.00 0.00 5.19
3294 5675 1.079127 ACATACGACAGCAGTGCCC 60.079 57.895 12.58 0.20 0.00 5.36
3295 5676 0.670546 ACACATACGACAGCAGTGCC 60.671 55.000 12.58 0.00 33.69 5.01
3296 5677 1.990799 TACACATACGACAGCAGTGC 58.009 50.000 7.13 7.13 33.69 4.40
3297 5678 5.519722 TGATATACACATACGACAGCAGTG 58.480 41.667 0.00 0.00 36.34 3.66
3298 5679 5.299531 ACTGATATACACATACGACAGCAGT 59.700 40.000 0.00 0.00 0.00 4.40
3299 5680 5.763088 ACTGATATACACATACGACAGCAG 58.237 41.667 0.00 0.00 0.00 4.24
3300 5681 5.767816 ACTGATATACACATACGACAGCA 57.232 39.130 0.00 0.00 0.00 4.41
3301 5682 6.562270 GCAAACTGATATACACATACGACAGC 60.562 42.308 0.00 0.00 0.00 4.40
3302 5683 6.345015 CGCAAACTGATATACACATACGACAG 60.345 42.308 0.00 0.00 0.00 3.51
3303 5684 5.457473 CGCAAACTGATATACACATACGACA 59.543 40.000 0.00 0.00 0.00 4.35
3304 5685 5.684184 TCGCAAACTGATATACACATACGAC 59.316 40.000 0.00 0.00 0.00 4.34
3305 5686 5.823353 TCGCAAACTGATATACACATACGA 58.177 37.500 0.00 0.00 0.00 3.43
3306 5687 6.690704 ATCGCAAACTGATATACACATACG 57.309 37.500 0.00 0.00 0.00 3.06
3327 5708 4.453819 ACTTTCTGCTGCTGTCAGTAAATC 59.546 41.667 0.00 0.00 42.29 2.17
3340 5721 1.945394 ACTGCTTGTGACTTTCTGCTG 59.055 47.619 0.00 0.00 0.00 4.41
3353 5734 1.396648 TGACACGACACAAACTGCTTG 59.603 47.619 0.00 0.00 41.19 4.01
3354 5735 1.732941 TGACACGACACAAACTGCTT 58.267 45.000 0.00 0.00 0.00 3.91
3355 5736 1.665679 CTTGACACGACACAAACTGCT 59.334 47.619 0.00 0.00 0.00 4.24
3356 5737 1.396996 ACTTGACACGACACAAACTGC 59.603 47.619 0.00 0.00 0.00 4.40
3357 5738 3.245284 CCTACTTGACACGACACAAACTG 59.755 47.826 0.00 0.00 0.00 3.16
3358 5739 3.454375 CCTACTTGACACGACACAAACT 58.546 45.455 0.00 0.00 0.00 2.66
3359 5740 2.542595 CCCTACTTGACACGACACAAAC 59.457 50.000 0.00 0.00 0.00 2.93
3360 5741 2.484065 CCCCTACTTGACACGACACAAA 60.484 50.000 0.00 0.00 0.00 2.83
3361 5742 1.069513 CCCCTACTTGACACGACACAA 59.930 52.381 0.00 0.00 0.00 3.33
3367 7889 0.974383 AGAACCCCCTACTTGACACG 59.026 55.000 0.00 0.00 0.00 4.49
3370 7892 0.035343 GCCAGAACCCCCTACTTGAC 60.035 60.000 0.00 0.00 0.00 3.18
3380 7902 3.056328 GGAACGCTGCCAGAACCC 61.056 66.667 0.00 0.00 0.00 4.11
3390 7912 1.134521 TGTTGTCAGTTGAGGAACGCT 60.135 47.619 0.00 0.00 37.15 5.07
3391 7913 1.295792 TGTTGTCAGTTGAGGAACGC 58.704 50.000 0.00 0.00 37.15 4.84
3408 7997 1.918262 TGAAGCTGATCTCCCCATTGT 59.082 47.619 0.00 0.00 0.00 2.71
3415 8004 1.138661 CAGGACCTGAAGCTGATCTCC 59.861 57.143 17.22 0.00 32.44 3.71
3420 8009 1.418097 TTGCCAGGACCTGAAGCTGA 61.418 55.000 23.77 8.80 32.44 4.26
3421 8010 0.323178 ATTGCCAGGACCTGAAGCTG 60.323 55.000 23.77 6.70 32.44 4.24
3422 8011 0.323178 CATTGCCAGGACCTGAAGCT 60.323 55.000 23.77 0.99 32.44 3.74
3433 8022 0.729116 CAACTCCTACGCATTGCCAG 59.271 55.000 2.41 0.54 0.00 4.85
3434 8023 0.676466 CCAACTCCTACGCATTGCCA 60.676 55.000 2.41 0.00 0.00 4.92
3435 8024 0.676782 ACCAACTCCTACGCATTGCC 60.677 55.000 2.41 0.00 0.00 4.52
3436 8025 0.727398 GACCAACTCCTACGCATTGC 59.273 55.000 0.00 0.00 0.00 3.56
3437 8026 2.271800 GAGACCAACTCCTACGCATTG 58.728 52.381 0.00 0.00 39.53 2.82
3438 8027 1.135083 CGAGACCAACTCCTACGCATT 60.135 52.381 0.00 0.00 42.18 3.56
3439 8028 0.456221 CGAGACCAACTCCTACGCAT 59.544 55.000 0.00 0.00 42.18 4.73
3440 8029 0.892358 ACGAGACCAACTCCTACGCA 60.892 55.000 0.00 0.00 42.18 5.24
3441 8030 0.243095 AACGAGACCAACTCCTACGC 59.757 55.000 0.00 0.00 42.18 4.42
3442 8031 2.593257 GAAACGAGACCAACTCCTACG 58.407 52.381 0.00 0.00 42.18 3.51
3443 8032 2.956913 GGAAACGAGACCAACTCCTAC 58.043 52.381 0.00 0.00 42.18 3.18
3456 8045 5.752662 GAGTGATGACTGAGCGGAAACGA 62.753 52.174 0.00 0.00 45.68 3.85
3457 8046 3.547273 GAGTGATGACTGAGCGGAAACG 61.547 54.545 0.00 0.00 45.61 3.60
3458 8047 1.996191 GAGTGATGACTGAGCGGAAAC 59.004 52.381 0.00 0.00 30.16 2.78
3459 8048 1.618343 TGAGTGATGACTGAGCGGAAA 59.382 47.619 0.00 0.00 30.16 3.13
3460 8049 1.256812 TGAGTGATGACTGAGCGGAA 58.743 50.000 0.00 0.00 30.16 4.30
3461 8050 1.406898 GATGAGTGATGACTGAGCGGA 59.593 52.381 0.00 0.00 30.16 5.54
3462 8051 1.135721 TGATGAGTGATGACTGAGCGG 59.864 52.381 0.00 0.00 30.16 5.52
3463 8052 2.461903 CTGATGAGTGATGACTGAGCG 58.538 52.381 0.00 0.00 30.16 5.03
3464 8053 2.429971 TCCTGATGAGTGATGACTGAGC 59.570 50.000 0.00 0.00 30.16 4.26
3465 8054 4.099727 ACATCCTGATGAGTGATGACTGAG 59.900 45.833 13.81 0.00 41.20 3.35
3466 8055 4.028825 ACATCCTGATGAGTGATGACTGA 58.971 43.478 13.81 0.00 41.20 3.41
3467 8056 4.403585 ACATCCTGATGAGTGATGACTG 57.596 45.455 13.81 0.00 41.20 3.51
3468 8057 4.039004 GCTACATCCTGATGAGTGATGACT 59.961 45.833 13.81 0.00 41.20 3.41
3469 8058 4.039004 AGCTACATCCTGATGAGTGATGAC 59.961 45.833 13.81 6.42 41.20 3.06
3470 8059 4.038883 CAGCTACATCCTGATGAGTGATGA 59.961 45.833 13.81 2.33 41.20 2.92
3471 8060 4.202233 ACAGCTACATCCTGATGAGTGATG 60.202 45.833 13.81 12.59 41.20 3.07
3472 8061 3.966006 ACAGCTACATCCTGATGAGTGAT 59.034 43.478 13.81 0.06 41.20 3.06
3473 8062 3.369175 ACAGCTACATCCTGATGAGTGA 58.631 45.455 13.81 0.00 41.20 3.41
3474 8063 3.715495 GACAGCTACATCCTGATGAGTG 58.285 50.000 13.81 7.44 41.20 3.51
3475 8064 2.360483 CGACAGCTACATCCTGATGAGT 59.640 50.000 13.81 4.44 41.20 3.41
3476 8065 2.620585 TCGACAGCTACATCCTGATGAG 59.379 50.000 13.81 7.86 41.20 2.90
3477 8066 2.620585 CTCGACAGCTACATCCTGATGA 59.379 50.000 13.81 0.00 41.20 2.92
3488 8077 0.039180 TTGACCCTCCTCGACAGCTA 59.961 55.000 0.00 0.00 0.00 3.32
3490 8079 0.390472 CTTTGACCCTCCTCGACAGC 60.390 60.000 0.00 0.00 0.00 4.40
3536 8125 4.072131 GCAAGGATGGTGAAGTTACTCAA 58.928 43.478 0.00 0.00 0.00 3.02
3561 8150 3.067461 TGGTCAAGAATGAAAACAACCCG 59.933 43.478 0.00 0.00 37.30 5.28
3562 8151 4.368315 GTGGTCAAGAATGAAAACAACCC 58.632 43.478 0.00 0.00 37.30 4.11
3575 8164 1.208706 TGGTGTCAAGGTGGTCAAGA 58.791 50.000 0.00 0.00 0.00 3.02
3580 8169 2.746279 TTTCATGGTGTCAAGGTGGT 57.254 45.000 0.00 0.00 0.00 4.16
3587 8176 4.759693 ACGCTCTTTATTTTCATGGTGTCA 59.240 37.500 0.00 0.00 0.00 3.58
3594 8183 5.105756 CCCTTGGAACGCTCTTTATTTTCAT 60.106 40.000 0.00 0.00 0.00 2.57
3601 8190 0.398696 TGCCCTTGGAACGCTCTTTA 59.601 50.000 0.00 0.00 0.00 1.85
3614 8203 2.430367 GGTTCTGACGGTGCCCTT 59.570 61.111 0.00 0.00 0.00 3.95
3616 8205 3.524648 TTCGGTTCTGACGGTGCCC 62.525 63.158 0.00 0.00 0.00 5.36
3617 8206 2.029964 TTCGGTTCTGACGGTGCC 59.970 61.111 0.00 0.00 0.00 5.01
3625 8214 2.671177 CGGCTGCTGTTCGGTTCTG 61.671 63.158 0.00 0.00 0.00 3.02
3632 8221 2.125350 CCTCTCCGGCTGCTGTTC 60.125 66.667 7.82 0.00 0.00 3.18
3642 8231 2.202623 CCGAAAGTCGCCTCTCCG 60.203 66.667 0.00 0.00 38.82 4.63
3644 8233 4.796225 CTCCGAAAGTCGCCTCTC 57.204 61.111 0.00 0.00 38.82 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.