Multiple sequence alignment - TraesCS2D01G049000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G049000 chr2D 100.000 3595 0 0 1 3595 17953901 17957495 0.000000e+00 6639.0
1 TraesCS2D01G049000 chr2D 94.948 2019 84 7 565 2567 17829839 17831855 0.000000e+00 3147.0
2 TraesCS2D01G049000 chr2D 97.611 586 4 1 3020 3595 637325119 637325704 0.000000e+00 996.0
3 TraesCS2D01G049000 chr2D 97.440 586 5 1 3020 3595 635047539 635046954 0.000000e+00 990.0
4 TraesCS2D01G049000 chr2D 99.033 517 5 0 2461 2977 18026372 18026888 0.000000e+00 928.0
5 TraesCS2D01G049000 chr2D 83.000 1000 147 19 1297 2284 18185845 18186833 0.000000e+00 883.0
6 TraesCS2D01G049000 chr2D 78.488 344 60 10 2168 2504 31473589 31473925 2.810000e-51 213.0
7 TraesCS2D01G049000 chr2A 97.414 1972 30 3 687 2654 19124626 19126580 0.000000e+00 3339.0
8 TraesCS2D01G049000 chr2A 89.881 168 12 2 1 164 1221696 1221862 1.010000e-50 211.0
9 TraesCS2D01G049000 chr2A 98.750 80 0 1 2681 2760 19126576 19126654 1.350000e-29 141.0
10 TraesCS2D01G049000 chr2A 80.303 132 21 4 191 320 373872539 373872411 1.060000e-15 95.3
11 TraesCS2D01G049000 chr2A 77.273 132 25 4 191 320 694649519 694649391 4.980000e-09 73.1
12 TraesCS2D01G049000 chr2A 74.667 150 32 6 173 320 586150278 586150133 1.080000e-05 62.1
13 TraesCS2D01G049000 chr2B 91.751 2182 153 18 802 2977 508737261 508739421 0.000000e+00 3007.0
14 TraesCS2D01G049000 chr2B 97.440 586 5 1 3020 3595 500752854 500753439 0.000000e+00 990.0
15 TraesCS2D01G049000 chr2B 89.276 718 49 17 969 1676 29141622 29140923 0.000000e+00 874.0
16 TraesCS2D01G049000 chr2B 89.035 228 25 0 581 808 508665180 508665407 2.110000e-72 283.0
17 TraesCS2D01G049000 chr2B 77.889 199 26 9 559 740 29141944 29141747 1.360000e-19 108.0
18 TraesCS2D01G049000 chr2B 94.545 55 3 0 2576 2630 29108478 29108424 6.400000e-13 86.1
19 TraesCS2D01G049000 chr2B 75.000 152 32 6 173 322 70609785 70609932 8.330000e-07 65.8
20 TraesCS2D01G049000 chr2B 75.373 134 27 6 189 320 310732908 310732779 3.880000e-05 60.2
21 TraesCS2D01G049000 chr6D 95.336 1115 52 0 1456 2570 395370786 395369672 0.000000e+00 1772.0
22 TraesCS2D01G049000 chr6D 92.703 836 55 4 1675 2506 395094836 395094003 0.000000e+00 1201.0
23 TraesCS2D01G049000 chr6D 92.634 543 29 2 574 1106 395375202 395374661 0.000000e+00 771.0
24 TraesCS2D01G049000 chr6D 95.493 355 16 0 1109 1463 395371492 395371138 5.210000e-158 568.0
25 TraesCS2D01G049000 chr6D 89.848 197 19 1 2564 2760 395085061 395084866 5.960000e-63 252.0
26 TraesCS2D01G049000 chr6D 74.910 558 116 21 1495 2041 38582620 38583164 2.160000e-57 233.0
27 TraesCS2D01G049000 chr6D 92.683 82 4 1 467 546 395375343 395375262 2.270000e-22 117.0
28 TraesCS2D01G049000 chr7A 85.250 1661 203 31 909 2549 626955939 626957577 0.000000e+00 1672.0
29 TraesCS2D01G049000 chr7A 83.005 1065 162 15 1456 2512 670889854 670888801 0.000000e+00 946.0
30 TraesCS2D01G049000 chr7A 88.750 560 46 9 909 1458 670904711 670904159 0.000000e+00 669.0
31 TraesCS2D01G049000 chr7A 91.509 212 17 1 550 761 626955680 626955890 1.260000e-74 291.0
32 TraesCS2D01G049000 chr7A 88.542 192 20 2 571 761 670904950 670904760 7.760000e-57 231.0
33 TraesCS2D01G049000 chr7B 84.810 1659 212 28 909 2549 643128424 643126788 0.000000e+00 1631.0
34 TraesCS2D01G049000 chr7B 84.259 216 26 2 2759 2974 544148477 544148684 1.690000e-48 204.0
35 TraesCS2D01G049000 chr7B 81.223 229 29 8 2750 2974 729399261 729399479 4.770000e-39 172.0
36 TraesCS2D01G049000 chr7B 75.497 151 28 9 173 320 121517227 121517371 8.330000e-07 65.8
37 TraesCS2D01G049000 chr3B 97.782 586 3 1 3020 3595 768288265 768287680 0.000000e+00 1002.0
38 TraesCS2D01G049000 chr3B 78.158 1401 267 34 1117 2502 43312959 43314335 0.000000e+00 856.0
39 TraesCS2D01G049000 chr3B 79.455 1212 226 22 1297 2498 74176894 74178092 0.000000e+00 837.0
40 TraesCS2D01G049000 chr3B 80.303 132 21 5 191 320 177075772 177075644 1.060000e-15 95.3
41 TraesCS2D01G049000 chr3B 88.710 62 6 1 245 305 177069684 177069623 1.380000e-09 75.0
42 TraesCS2D01G049000 chr4D 97.611 586 4 1 3020 3595 123588893 123588308 0.000000e+00 996.0
43 TraesCS2D01G049000 chr4D 97.279 588 4 2 3020 3595 123378108 123377521 0.000000e+00 987.0
44 TraesCS2D01G049000 chr4D 77.863 131 25 3 191 320 497584564 497584437 1.070000e-10 78.7
45 TraesCS2D01G049000 chr4D 97.561 41 0 1 2976 3015 123378193 123378153 6.440000e-08 69.4
46 TraesCS2D01G049000 chr4D 97.561 41 0 1 2976 3015 123588978 123588938 6.440000e-08 69.4
47 TraesCS2D01G049000 chr1A 97.611 586 4 1 3020 3595 238145943 238146528 0.000000e+00 996.0
48 TraesCS2D01G049000 chr1A 97.099 586 7 1 3020 3595 334070223 334070808 0.000000e+00 979.0
49 TraesCS2D01G049000 chr1A 97.561 41 0 1 2976 3015 238143234 238143274 6.440000e-08 69.4
50 TraesCS2D01G049000 chr1A 97.561 41 0 1 2976 3015 238145858 238145898 6.440000e-08 69.4
51 TraesCS2D01G049000 chr1A 97.561 41 0 1 2976 3015 334070138 334070178 6.440000e-08 69.4
52 TraesCS2D01G049000 chrUn 97.440 586 5 1 3020 3595 434110810 434111395 0.000000e+00 990.0
53 TraesCS2D01G049000 chrUn 96.429 280 0 1 3326 3595 446906603 446906882 1.520000e-123 453.0
54 TraesCS2D01G049000 chrUn 100.000 112 0 0 3484 3595 454096883 454096772 1.310000e-49 207.0
55 TraesCS2D01G049000 chrUn 89.256 121 11 1 2758 2878 321125761 321125643 2.240000e-32 150.0
56 TraesCS2D01G049000 chrUn 89.256 121 11 1 2758 2878 321129079 321128961 2.240000e-32 150.0
57 TraesCS2D01G049000 chrUn 97.561 41 0 1 2976 3015 382046041 382046001 6.440000e-08 69.4
58 TraesCS2D01G049000 chrUn 97.561 41 0 1 2976 3015 385973124 385973084 6.440000e-08 69.4
59 TraesCS2D01G049000 chrUn 97.561 41 0 1 2976 3015 434110725 434110765 6.440000e-08 69.4
60 TraesCS2D01G049000 chr7D 97.440 586 5 1 3020 3595 382001035 382001620 0.000000e+00 990.0
61 TraesCS2D01G049000 chr7D 95.436 241 1 1 3365 3595 601296560 601296800 3.390000e-100 375.0
62 TraesCS2D01G049000 chr7D 89.091 55 4 2 2259 2312 93881047 93880994 2.320000e-07 67.6
63 TraesCS2D01G049000 chr3A 97.440 586 5 1 3020 3595 247679965 247679380 0.000000e+00 990.0
64 TraesCS2D01G049000 chr3A 80.822 146 23 4 176 319 129472881 129472739 3.790000e-20 110.0
65 TraesCS2D01G049000 chr1B 97.099 586 7 1 3020 3595 672499417 672500002 0.000000e+00 979.0
66 TraesCS2D01G049000 chr3D 78.109 1407 266 36 1117 2502 26073378 26074763 0.000000e+00 854.0
67 TraesCS2D01G049000 chr3D 78.650 1274 247 24 1240 2502 26019517 26018258 0.000000e+00 822.0
68 TraesCS2D01G049000 chr3D 78.642 1208 237 17 1304 2502 25987815 25986620 0.000000e+00 782.0
69 TraesCS2D01G049000 chr3D 79.371 509 101 4 1996 2502 25984938 25984432 4.410000e-94 355.0
70 TraesCS2D01G049000 chr5D 75.885 763 165 16 1296 2051 22796743 22797493 4.380000e-99 372.0
71 TraesCS2D01G049000 chr5D 75.781 768 161 18 1286 2042 27054576 27055329 7.340000e-97 364.0
72 TraesCS2D01G049000 chr5D 75.690 761 161 19 1300 2051 27260508 27259763 3.410000e-95 359.0
73 TraesCS2D01G049000 chr5A 75.686 765 163 17 1296 2051 16414855 16414105 9.490000e-96 361.0
74 TraesCS2D01G049000 chr5A 79.618 157 25 7 165 319 125281986 125282137 4.910000e-19 106.0
75 TraesCS2D01G049000 chr5A 77.987 159 25 8 165 320 506796386 506796235 1.370000e-14 91.6
76 TraesCS2D01G049000 chr5A 79.070 129 21 6 194 320 677476896 677476772 2.300000e-12 84.2
77 TraesCS2D01G049000 chr6B 88.584 219 22 3 2751 2969 707127576 707127361 2.750000e-66 263.0
78 TraesCS2D01G049000 chr6B 89.151 212 20 3 2758 2969 707131067 707130859 9.900000e-66 261.0
79 TraesCS2D01G049000 chr6A 85.259 251 37 0 1444 1694 613644745 613644995 3.560000e-65 259.0
80 TraesCS2D01G049000 chr6A 97.561 41 0 1 2976 3015 338526038 338525998 6.440000e-08 69.4
81 TraesCS2D01G049000 chr6A 83.117 77 12 1 245 320 614349753 614349829 6.440000e-08 69.4
82 TraesCS2D01G049000 chr4A 86.580 231 21 4 2750 2978 150828802 150829024 2.770000e-61 246.0
83 TraesCS2D01G049000 chr4A 100.000 112 0 0 3484 3595 332371592 332371703 1.310000e-49 207.0
84 TraesCS2D01G049000 chr4A 75.168 149 33 4 173 320 360985337 360985192 2.320000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G049000 chr2D 17953901 17957495 3594 False 6639.000000 6639 100.000000 1 3595 1 chr2D.!!$F2 3594
1 TraesCS2D01G049000 chr2D 17829839 17831855 2016 False 3147.000000 3147 94.948000 565 2567 1 chr2D.!!$F1 2002
2 TraesCS2D01G049000 chr2D 637325119 637325704 585 False 996.000000 996 97.611000 3020 3595 1 chr2D.!!$F6 575
3 TraesCS2D01G049000 chr2D 635046954 635047539 585 True 990.000000 990 97.440000 3020 3595 1 chr2D.!!$R1 575
4 TraesCS2D01G049000 chr2D 18026372 18026888 516 False 928.000000 928 99.033000 2461 2977 1 chr2D.!!$F3 516
5 TraesCS2D01G049000 chr2D 18185845 18186833 988 False 883.000000 883 83.000000 1297 2284 1 chr2D.!!$F4 987
6 TraesCS2D01G049000 chr2A 19124626 19126654 2028 False 1740.000000 3339 98.082000 687 2760 2 chr2A.!!$F2 2073
7 TraesCS2D01G049000 chr2B 508737261 508739421 2160 False 3007.000000 3007 91.751000 802 2977 1 chr2B.!!$F4 2175
8 TraesCS2D01G049000 chr2B 500752854 500753439 585 False 990.000000 990 97.440000 3020 3595 1 chr2B.!!$F2 575
9 TraesCS2D01G049000 chr2B 29140923 29141944 1021 True 491.000000 874 83.582500 559 1676 2 chr2B.!!$R3 1117
10 TraesCS2D01G049000 chr6D 395094003 395094836 833 True 1201.000000 1201 92.703000 1675 2506 1 chr6D.!!$R2 831
11 TraesCS2D01G049000 chr6D 395369672 395375343 5671 True 807.000000 1772 94.036500 467 2570 4 chr6D.!!$R3 2103
12 TraesCS2D01G049000 chr6D 38582620 38583164 544 False 233.000000 233 74.910000 1495 2041 1 chr6D.!!$F1 546
13 TraesCS2D01G049000 chr7A 626955680 626957577 1897 False 981.500000 1672 88.379500 550 2549 2 chr7A.!!$F1 1999
14 TraesCS2D01G049000 chr7A 670888801 670889854 1053 True 946.000000 946 83.005000 1456 2512 1 chr7A.!!$R1 1056
15 TraesCS2D01G049000 chr7A 670904159 670904950 791 True 450.000000 669 88.646000 571 1458 2 chr7A.!!$R2 887
16 TraesCS2D01G049000 chr7B 643126788 643128424 1636 True 1631.000000 1631 84.810000 909 2549 1 chr7B.!!$R1 1640
17 TraesCS2D01G049000 chr3B 768287680 768288265 585 True 1002.000000 1002 97.782000 3020 3595 1 chr3B.!!$R3 575
18 TraesCS2D01G049000 chr3B 43312959 43314335 1376 False 856.000000 856 78.158000 1117 2502 1 chr3B.!!$F1 1385
19 TraesCS2D01G049000 chr3B 74176894 74178092 1198 False 837.000000 837 79.455000 1297 2498 1 chr3B.!!$F2 1201
20 TraesCS2D01G049000 chr4D 123588308 123588978 670 True 532.700000 996 97.586000 2976 3595 2 chr4D.!!$R3 619
21 TraesCS2D01G049000 chr4D 123377521 123378193 672 True 528.200000 987 97.420000 2976 3595 2 chr4D.!!$R2 619
22 TraesCS2D01G049000 chr1A 334070138 334070808 670 False 524.200000 979 97.330000 2976 3595 2 chr1A.!!$F2 619
23 TraesCS2D01G049000 chr1A 238143234 238146528 3294 False 378.266667 996 97.577667 2976 3595 3 chr1A.!!$F1 619
24 TraesCS2D01G049000 chrUn 434110725 434111395 670 False 529.700000 990 97.500500 2976 3595 2 chrUn.!!$F2 619
25 TraesCS2D01G049000 chr7D 382001035 382001620 585 False 990.000000 990 97.440000 3020 3595 1 chr7D.!!$F1 575
26 TraesCS2D01G049000 chr3A 247679380 247679965 585 True 990.000000 990 97.440000 3020 3595 1 chr3A.!!$R2 575
27 TraesCS2D01G049000 chr1B 672499417 672500002 585 False 979.000000 979 97.099000 3020 3595 1 chr1B.!!$F1 575
28 TraesCS2D01G049000 chr3D 26073378 26074763 1385 False 854.000000 854 78.109000 1117 2502 1 chr3D.!!$F1 1385
29 TraesCS2D01G049000 chr3D 26018258 26019517 1259 True 822.000000 822 78.650000 1240 2502 1 chr3D.!!$R1 1262
30 TraesCS2D01G049000 chr3D 25984432 25987815 3383 True 568.500000 782 79.006500 1304 2502 2 chr3D.!!$R2 1198
31 TraesCS2D01G049000 chr5D 22796743 22797493 750 False 372.000000 372 75.885000 1296 2051 1 chr5D.!!$F1 755
32 TraesCS2D01G049000 chr5D 27054576 27055329 753 False 364.000000 364 75.781000 1286 2042 1 chr5D.!!$F2 756
33 TraesCS2D01G049000 chr5D 27259763 27260508 745 True 359.000000 359 75.690000 1300 2051 1 chr5D.!!$R1 751
34 TraesCS2D01G049000 chr5A 16414105 16414855 750 True 361.000000 361 75.686000 1296 2051 1 chr5A.!!$R1 755
35 TraesCS2D01G049000 chr6B 707127361 707131067 3706 True 262.000000 263 88.867500 2751 2969 2 chr6B.!!$R1 218

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
200 201 0.036590 TTCGGGTAAAACTTCCGGGG 59.963 55.000 0.0 0.0 43.54 5.73 F
216 217 0.179026 GGGGAGATTCCGGGCTAAAC 60.179 60.000 0.0 0.0 37.43 2.01 F
1237 4526 0.035343 GGCTTCACTCCCAGGTTACC 60.035 60.000 0.0 0.0 0.00 2.85 F
1974 5640 2.558359 ACTTACAAGGATGGCTTGTTGC 59.442 45.455 0.0 0.0 41.66 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1237 4526 4.151258 TCAGCTTTGCAGAATTTCTTCG 57.849 40.909 0.00 0.0 36.45 3.79 R
2251 5922 3.321682 CCCAAGAAACAACACATGGTCAT 59.678 43.478 0.00 0.0 0.00 3.06 R
2433 8292 1.294659 GACCAAAGCTGCGGAGACAG 61.295 60.000 8.65 0.0 40.80 3.51 R
2918 12275 4.218417 ACACAATCATTTTCTGTAGGTGGC 59.782 41.667 0.00 0.0 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.124036 AGAGTAGAGCAAGTACTCCATCT 57.876 43.478 13.59 2.43 45.19 2.90
24 25 5.515106 AGAGTAGAGCAAGTACTCCATCTT 58.485 41.667 13.59 0.00 45.19 2.40
25 26 5.955355 AGAGTAGAGCAAGTACTCCATCTTT 59.045 40.000 13.59 0.00 45.19 2.52
26 27 6.439058 AGAGTAGAGCAAGTACTCCATCTTTT 59.561 38.462 13.59 0.00 45.19 2.27
27 28 7.010339 AGTAGAGCAAGTACTCCATCTTTTT 57.990 36.000 0.00 0.00 37.39 1.94
28 29 8.135382 AGTAGAGCAAGTACTCCATCTTTTTA 57.865 34.615 0.00 0.00 37.39 1.52
29 30 8.594550 AGTAGAGCAAGTACTCCATCTTTTTAA 58.405 33.333 0.00 0.00 37.39 1.52
30 31 9.384764 GTAGAGCAAGTACTCCATCTTTTTAAT 57.615 33.333 0.00 0.00 37.39 1.40
31 32 8.499403 AGAGCAAGTACTCCATCTTTTTAATC 57.501 34.615 0.00 0.00 37.39 1.75
32 33 8.325046 AGAGCAAGTACTCCATCTTTTTAATCT 58.675 33.333 0.00 0.00 37.39 2.40
33 34 8.499403 AGCAAGTACTCCATCTTTTTAATCTC 57.501 34.615 0.00 0.00 0.00 2.75
34 35 8.325046 AGCAAGTACTCCATCTTTTTAATCTCT 58.675 33.333 0.00 0.00 0.00 3.10
35 36 8.394121 GCAAGTACTCCATCTTTTTAATCTCTG 58.606 37.037 0.00 0.00 0.00 3.35
36 37 8.887717 CAAGTACTCCATCTTTTTAATCTCTGG 58.112 37.037 0.00 0.00 0.00 3.86
37 38 8.380742 AGTACTCCATCTTTTTAATCTCTGGA 57.619 34.615 0.00 0.00 0.00 3.86
38 39 8.826765 AGTACTCCATCTTTTTAATCTCTGGAA 58.173 33.333 0.00 0.00 31.36 3.53
39 40 9.449719 GTACTCCATCTTTTTAATCTCTGGAAA 57.550 33.333 0.00 0.00 31.36 3.13
40 41 8.572855 ACTCCATCTTTTTAATCTCTGGAAAG 57.427 34.615 0.00 0.00 31.36 2.62
41 42 7.613411 ACTCCATCTTTTTAATCTCTGGAAAGG 59.387 37.037 0.00 0.00 31.36 3.11
42 43 7.698912 TCCATCTTTTTAATCTCTGGAAAGGA 58.301 34.615 0.00 0.00 0.00 3.36
43 44 8.170061 TCCATCTTTTTAATCTCTGGAAAGGAA 58.830 33.333 0.00 0.00 0.00 3.36
44 45 8.975295 CCATCTTTTTAATCTCTGGAAAGGAAT 58.025 33.333 0.00 0.00 0.00 3.01
52 53 7.946381 AATCTCTGGAAAGGAATAAAAGTCC 57.054 36.000 0.00 0.00 35.17 3.85
53 54 6.448369 TCTCTGGAAAGGAATAAAAGTCCA 57.552 37.500 0.00 0.00 37.65 4.02
54 55 6.238648 TCTCTGGAAAGGAATAAAAGTCCAC 58.761 40.000 0.00 0.00 37.65 4.02
55 56 6.044404 TCTCTGGAAAGGAATAAAAGTCCACT 59.956 38.462 0.00 0.00 37.65 4.00
56 57 6.610830 TCTGGAAAGGAATAAAAGTCCACTT 58.389 36.000 0.00 0.00 37.65 3.16
57 58 7.751646 TCTGGAAAGGAATAAAAGTCCACTTA 58.248 34.615 0.00 0.00 37.65 2.24
58 59 7.883311 TCTGGAAAGGAATAAAAGTCCACTTAG 59.117 37.037 0.00 0.00 37.65 2.18
59 60 7.523415 TGGAAAGGAATAAAAGTCCACTTAGT 58.477 34.615 0.00 0.00 37.65 2.24
60 61 8.662255 TGGAAAGGAATAAAAGTCCACTTAGTA 58.338 33.333 0.00 0.00 37.65 1.82
61 62 9.511272 GGAAAGGAATAAAAGTCCACTTAGTAA 57.489 33.333 0.00 0.00 37.65 2.24
63 64 8.563123 AAGGAATAAAAGTCCACTTAGTAAGC 57.437 34.615 9.92 0.00 37.65 3.09
64 65 7.110810 AGGAATAAAAGTCCACTTAGTAAGCC 58.889 38.462 9.92 0.00 37.65 4.35
65 66 6.882678 GGAATAAAAGTCCACTTAGTAAGCCA 59.117 38.462 9.92 0.00 34.61 4.75
66 67 7.392393 GGAATAAAAGTCCACTTAGTAAGCCAA 59.608 37.037 9.92 0.00 34.61 4.52
67 68 8.700439 AATAAAAGTCCACTTAGTAAGCCAAA 57.300 30.769 9.92 0.00 34.61 3.28
68 69 8.700439 ATAAAAGTCCACTTAGTAAGCCAAAA 57.300 30.769 9.92 0.00 34.61 2.44
69 70 7.412853 AAAAGTCCACTTAGTAAGCCAAAAA 57.587 32.000 9.92 0.00 34.61 1.94
70 71 6.635030 AAGTCCACTTAGTAAGCCAAAAAG 57.365 37.500 9.92 0.00 33.79 2.27
71 72 5.937111 AGTCCACTTAGTAAGCCAAAAAGA 58.063 37.500 9.92 0.00 0.00 2.52
72 73 5.763698 AGTCCACTTAGTAAGCCAAAAAGAC 59.236 40.000 9.92 6.61 0.00 3.01
73 74 5.529800 GTCCACTTAGTAAGCCAAAAAGACA 59.470 40.000 9.92 0.00 0.00 3.41
74 75 6.038936 GTCCACTTAGTAAGCCAAAAAGACAA 59.961 38.462 9.92 0.00 0.00 3.18
75 76 6.775629 TCCACTTAGTAAGCCAAAAAGACAAT 59.224 34.615 9.92 0.00 0.00 2.71
76 77 7.940137 TCCACTTAGTAAGCCAAAAAGACAATA 59.060 33.333 9.92 0.00 0.00 1.90
77 78 8.237267 CCACTTAGTAAGCCAAAAAGACAATAG 58.763 37.037 9.92 0.00 0.00 1.73
78 79 8.784043 CACTTAGTAAGCCAAAAAGACAATAGT 58.216 33.333 9.92 0.00 0.00 2.12
79 80 9.000486 ACTTAGTAAGCCAAAAAGACAATAGTC 58.000 33.333 9.92 0.00 45.31 2.59
93 94 6.917217 GACAATAGTCTGCTTAATTCAGCT 57.083 37.500 12.62 4.59 41.64 4.24
94 95 6.674694 ACAATAGTCTGCTTAATTCAGCTG 57.325 37.500 7.63 7.63 40.79 4.24
95 96 6.409704 ACAATAGTCTGCTTAATTCAGCTGA 58.590 36.000 13.74 13.74 43.31 4.26
96 97 6.881065 ACAATAGTCTGCTTAATTCAGCTGAA 59.119 34.615 30.23 30.23 45.93 3.02
97 98 6.917217 ATAGTCTGCTTAATTCAGCTGAAC 57.083 37.500 30.66 17.87 45.93 3.18
98 99 4.904241 AGTCTGCTTAATTCAGCTGAACT 58.096 39.130 30.66 23.20 45.93 3.01
99 100 4.934602 AGTCTGCTTAATTCAGCTGAACTC 59.065 41.667 30.66 17.17 45.93 3.01
100 101 4.934602 GTCTGCTTAATTCAGCTGAACTCT 59.065 41.667 30.66 19.59 45.93 3.24
101 102 5.411053 GTCTGCTTAATTCAGCTGAACTCTT 59.589 40.000 30.66 22.35 45.93 2.85
102 103 6.000219 TCTGCTTAATTCAGCTGAACTCTTT 59.000 36.000 30.66 22.01 42.78 2.52
103 104 7.118390 GTCTGCTTAATTCAGCTGAACTCTTTA 59.882 37.037 30.66 21.01 45.93 1.85
104 105 7.661437 TCTGCTTAATTCAGCTGAACTCTTTAA 59.339 33.333 30.66 25.59 42.78 1.52
105 106 8.340618 TGCTTAATTCAGCTGAACTCTTTAAT 57.659 30.769 30.66 10.18 40.79 1.40
106 107 8.454106 TGCTTAATTCAGCTGAACTCTTTAATC 58.546 33.333 30.66 23.02 40.79 1.75
107 108 7.912773 GCTTAATTCAGCTGAACTCTTTAATCC 59.087 37.037 30.66 18.24 36.80 3.01
108 109 6.765915 AATTCAGCTGAACTCTTTAATCCC 57.234 37.500 30.66 0.00 36.80 3.85
109 110 5.505181 TTCAGCTGAACTCTTTAATCCCT 57.495 39.130 25.16 0.00 0.00 4.20
110 111 4.836825 TCAGCTGAACTCTTTAATCCCTG 58.163 43.478 15.67 0.00 0.00 4.45
111 112 3.944015 CAGCTGAACTCTTTAATCCCTGG 59.056 47.826 8.42 0.00 0.00 4.45
112 113 2.685388 GCTGAACTCTTTAATCCCTGGC 59.315 50.000 0.00 0.00 0.00 4.85
113 114 3.623453 GCTGAACTCTTTAATCCCTGGCT 60.623 47.826 0.00 0.00 0.00 4.75
114 115 4.384208 GCTGAACTCTTTAATCCCTGGCTA 60.384 45.833 0.00 0.00 0.00 3.93
115 116 5.359194 TGAACTCTTTAATCCCTGGCTAG 57.641 43.478 0.00 0.00 0.00 3.42
116 117 4.783227 TGAACTCTTTAATCCCTGGCTAGT 59.217 41.667 0.00 0.00 0.00 2.57
117 118 5.962031 TGAACTCTTTAATCCCTGGCTAGTA 59.038 40.000 0.00 0.00 0.00 1.82
118 119 6.442564 TGAACTCTTTAATCCCTGGCTAGTAA 59.557 38.462 0.00 0.00 0.00 2.24
119 120 6.236558 ACTCTTTAATCCCTGGCTAGTAAC 57.763 41.667 0.00 0.00 0.00 2.50
120 121 5.724854 ACTCTTTAATCCCTGGCTAGTAACA 59.275 40.000 0.00 0.00 0.00 2.41
121 122 6.387220 ACTCTTTAATCCCTGGCTAGTAACAT 59.613 38.462 0.00 0.00 0.00 2.71
122 123 6.591935 TCTTTAATCCCTGGCTAGTAACATG 58.408 40.000 0.00 0.00 0.00 3.21
123 124 3.864789 AATCCCTGGCTAGTAACATGG 57.135 47.619 0.00 0.00 0.00 3.66
124 125 2.263895 TCCCTGGCTAGTAACATGGT 57.736 50.000 0.00 0.00 0.00 3.55
125 126 1.837439 TCCCTGGCTAGTAACATGGTG 59.163 52.381 0.00 0.00 0.00 4.17
126 127 1.559682 CCCTGGCTAGTAACATGGTGT 59.440 52.381 0.00 0.00 0.00 4.16
127 128 2.632377 CCTGGCTAGTAACATGGTGTG 58.368 52.381 0.00 0.00 0.00 3.82
128 129 2.236146 CCTGGCTAGTAACATGGTGTGA 59.764 50.000 0.00 0.00 0.00 3.58
129 130 3.307410 CCTGGCTAGTAACATGGTGTGAA 60.307 47.826 0.00 0.00 0.00 3.18
130 131 4.517285 CTGGCTAGTAACATGGTGTGAAT 58.483 43.478 0.00 0.00 0.00 2.57
131 132 4.917385 TGGCTAGTAACATGGTGTGAATT 58.083 39.130 0.00 0.00 0.00 2.17
132 133 4.699735 TGGCTAGTAACATGGTGTGAATTG 59.300 41.667 0.00 0.00 0.00 2.32
133 134 4.700213 GGCTAGTAACATGGTGTGAATTGT 59.300 41.667 0.00 0.00 0.00 2.71
134 135 5.391950 GGCTAGTAACATGGTGTGAATTGTG 60.392 44.000 0.00 0.00 0.00 3.33
135 136 5.411361 GCTAGTAACATGGTGTGAATTGTGA 59.589 40.000 0.00 0.00 0.00 3.58
136 137 6.072728 GCTAGTAACATGGTGTGAATTGTGAA 60.073 38.462 0.00 0.00 0.00 3.18
137 138 6.899393 AGTAACATGGTGTGAATTGTGAAT 57.101 33.333 0.00 0.00 0.00 2.57
138 139 6.680810 AGTAACATGGTGTGAATTGTGAATG 58.319 36.000 0.00 0.00 0.00 2.67
139 140 5.787953 AACATGGTGTGAATTGTGAATGA 57.212 34.783 0.00 0.00 0.00 2.57
140 141 5.381174 ACATGGTGTGAATTGTGAATGAG 57.619 39.130 0.00 0.00 0.00 2.90
141 142 3.921119 TGGTGTGAATTGTGAATGAGC 57.079 42.857 0.00 0.00 0.00 4.26
142 143 3.489355 TGGTGTGAATTGTGAATGAGCT 58.511 40.909 0.00 0.00 0.00 4.09
143 144 3.890756 TGGTGTGAATTGTGAATGAGCTT 59.109 39.130 0.00 0.00 0.00 3.74
144 145 4.232221 GGTGTGAATTGTGAATGAGCTTG 58.768 43.478 0.00 0.00 0.00 4.01
145 146 3.671928 GTGTGAATTGTGAATGAGCTTGC 59.328 43.478 0.00 0.00 0.00 4.01
146 147 3.318557 TGTGAATTGTGAATGAGCTTGCA 59.681 39.130 0.00 0.00 0.00 4.08
147 148 4.021807 TGTGAATTGTGAATGAGCTTGCAT 60.022 37.500 0.00 0.00 0.00 3.96
148 149 5.183522 TGTGAATTGTGAATGAGCTTGCATA 59.816 36.000 0.00 0.00 0.00 3.14
149 150 6.127563 TGTGAATTGTGAATGAGCTTGCATAT 60.128 34.615 0.00 0.00 0.00 1.78
150 151 6.755141 GTGAATTGTGAATGAGCTTGCATATT 59.245 34.615 0.00 0.00 0.00 1.28
151 152 7.277098 GTGAATTGTGAATGAGCTTGCATATTT 59.723 33.333 0.00 0.00 0.00 1.40
152 153 7.276878 TGAATTGTGAATGAGCTTGCATATTTG 59.723 33.333 0.00 0.00 0.00 2.32
153 154 5.900865 TGTGAATGAGCTTGCATATTTGA 57.099 34.783 0.00 0.00 0.00 2.69
154 155 5.886992 TGTGAATGAGCTTGCATATTTGAG 58.113 37.500 0.00 0.00 0.00 3.02
155 156 5.416639 TGTGAATGAGCTTGCATATTTGAGT 59.583 36.000 0.00 0.00 0.00 3.41
156 157 5.970023 GTGAATGAGCTTGCATATTTGAGTC 59.030 40.000 0.00 0.00 0.00 3.36
157 158 5.066893 TGAATGAGCTTGCATATTTGAGTCC 59.933 40.000 0.00 0.00 0.00 3.85
158 159 3.954200 TGAGCTTGCATATTTGAGTCCA 58.046 40.909 0.00 0.00 0.00 4.02
159 160 3.691118 TGAGCTTGCATATTTGAGTCCAC 59.309 43.478 0.00 0.00 0.00 4.02
160 161 3.689347 AGCTTGCATATTTGAGTCCACA 58.311 40.909 0.00 0.00 0.00 4.17
161 162 3.441572 AGCTTGCATATTTGAGTCCACAC 59.558 43.478 0.00 0.00 0.00 3.82
162 163 3.191162 GCTTGCATATTTGAGTCCACACA 59.809 43.478 0.00 0.00 0.00 3.72
163 164 4.142315 GCTTGCATATTTGAGTCCACACAT 60.142 41.667 0.00 0.00 0.00 3.21
164 165 5.066375 GCTTGCATATTTGAGTCCACACATA 59.934 40.000 0.00 0.00 0.00 2.29
165 166 6.238842 GCTTGCATATTTGAGTCCACACATAT 60.239 38.462 0.00 0.00 0.00 1.78
166 167 7.643569 TTGCATATTTGAGTCCACACATATT 57.356 32.000 0.00 0.00 0.00 1.28
167 168 7.643569 TGCATATTTGAGTCCACACATATTT 57.356 32.000 0.00 0.00 0.00 1.40
168 169 8.065473 TGCATATTTGAGTCCACACATATTTT 57.935 30.769 0.00 0.00 0.00 1.82
169 170 7.975058 TGCATATTTGAGTCCACACATATTTTG 59.025 33.333 0.00 0.00 0.00 2.44
170 171 8.190122 GCATATTTGAGTCCACACATATTTTGA 58.810 33.333 0.00 0.00 0.00 2.69
171 172 9.726232 CATATTTGAGTCCACACATATTTTGAG 57.274 33.333 0.00 0.00 0.00 3.02
172 173 5.627499 TTGAGTCCACACATATTTTGAGC 57.373 39.130 0.00 0.00 0.00 4.26
173 174 4.009675 TGAGTCCACACATATTTTGAGCC 58.990 43.478 0.00 0.00 0.00 4.70
174 175 3.009723 AGTCCACACATATTTTGAGCCG 58.990 45.455 0.00 0.00 0.00 5.52
175 176 3.006940 GTCCACACATATTTTGAGCCGA 58.993 45.455 0.00 0.00 0.00 5.54
176 177 3.063997 GTCCACACATATTTTGAGCCGAG 59.936 47.826 0.00 0.00 0.00 4.63
177 178 3.055458 TCCACACATATTTTGAGCCGAGA 60.055 43.478 0.00 0.00 0.00 4.04
178 179 3.689161 CCACACATATTTTGAGCCGAGAA 59.311 43.478 0.00 0.00 0.00 2.87
179 180 4.336433 CCACACATATTTTGAGCCGAGAAT 59.664 41.667 0.00 0.00 0.00 2.40
180 181 5.163622 CCACACATATTTTGAGCCGAGAATT 60.164 40.000 0.00 0.00 0.00 2.17
181 182 6.324819 CACACATATTTTGAGCCGAGAATTT 58.675 36.000 0.00 0.00 0.00 1.82
182 183 6.808212 CACACATATTTTGAGCCGAGAATTTT 59.192 34.615 0.00 0.00 0.00 1.82
183 184 7.008628 CACACATATTTTGAGCCGAGAATTTTC 59.991 37.037 0.00 0.00 0.00 2.29
184 185 6.195244 CACATATTTTGAGCCGAGAATTTTCG 59.805 38.462 11.22 11.22 40.18 3.46
196 197 5.388111 CGAGAATTTTCGGGTAAAACTTCC 58.612 41.667 10.38 0.00 39.82 3.46
197 198 5.366829 AGAATTTTCGGGTAAAACTTCCG 57.633 39.130 0.00 0.00 39.82 4.30
198 199 4.216902 AGAATTTTCGGGTAAAACTTCCGG 59.783 41.667 0.00 0.00 43.54 5.14
199 200 1.894881 TTTCGGGTAAAACTTCCGGG 58.105 50.000 0.00 0.00 43.54 5.73
200 201 0.036590 TTCGGGTAAAACTTCCGGGG 59.963 55.000 0.00 0.00 43.54 5.73
201 202 0.835543 TCGGGTAAAACTTCCGGGGA 60.836 55.000 0.00 0.00 43.54 4.81
202 203 0.392060 CGGGTAAAACTTCCGGGGAG 60.392 60.000 0.00 0.00 40.07 4.30
203 204 0.986527 GGGTAAAACTTCCGGGGAGA 59.013 55.000 9.98 0.00 0.00 3.71
204 205 1.562942 GGGTAAAACTTCCGGGGAGAT 59.437 52.381 9.98 0.00 0.00 2.75
205 206 2.025605 GGGTAAAACTTCCGGGGAGATT 60.026 50.000 9.98 0.00 0.00 2.40
206 207 3.276857 GGTAAAACTTCCGGGGAGATTC 58.723 50.000 9.98 0.00 0.00 2.52
207 208 2.509166 AAAACTTCCGGGGAGATTCC 57.491 50.000 9.98 0.00 35.23 3.01
208 209 0.252197 AAACTTCCGGGGAGATTCCG 59.748 55.000 9.98 0.00 46.43 4.30
213 214 2.523412 CGGGGAGATTCCGGGCTA 60.523 66.667 0.00 0.00 43.45 3.93
214 215 2.138179 CGGGGAGATTCCGGGCTAA 61.138 63.158 0.00 0.00 43.45 3.09
215 216 1.692173 CGGGGAGATTCCGGGCTAAA 61.692 60.000 0.00 0.00 43.45 1.85
216 217 0.179026 GGGGAGATTCCGGGCTAAAC 60.179 60.000 0.00 0.00 37.43 2.01
217 218 0.544697 GGGAGATTCCGGGCTAAACA 59.455 55.000 0.00 0.00 37.43 2.83
218 219 1.475213 GGGAGATTCCGGGCTAAACAG 60.475 57.143 0.00 0.00 37.43 3.16
219 220 1.485066 GGAGATTCCGGGCTAAACAGA 59.515 52.381 0.00 0.00 0.00 3.41
220 221 2.093128 GGAGATTCCGGGCTAAACAGAA 60.093 50.000 0.00 0.00 0.00 3.02
221 222 3.198872 GAGATTCCGGGCTAAACAGAAG 58.801 50.000 0.00 0.00 0.00 2.85
222 223 1.671328 GATTCCGGGCTAAACAGAAGC 59.329 52.381 0.00 0.00 39.33 3.86
223 224 0.398696 TTCCGGGCTAAACAGAAGCA 59.601 50.000 0.00 0.00 41.93 3.91
224 225 0.618458 TCCGGGCTAAACAGAAGCAT 59.382 50.000 0.00 0.00 41.93 3.79
225 226 0.734889 CCGGGCTAAACAGAAGCATG 59.265 55.000 0.00 0.00 41.93 4.06
226 227 0.734889 CGGGCTAAACAGAAGCATGG 59.265 55.000 0.00 0.00 41.93 3.66
227 228 0.457443 GGGCTAAACAGAAGCATGGC 59.543 55.000 0.00 0.00 41.93 4.40
228 229 1.176527 GGCTAAACAGAAGCATGGCA 58.823 50.000 0.00 0.00 41.93 4.92
229 230 1.753073 GGCTAAACAGAAGCATGGCAT 59.247 47.619 0.00 0.00 41.93 4.40
230 231 2.223665 GGCTAAACAGAAGCATGGCATC 60.224 50.000 0.00 0.00 41.93 3.91
231 232 2.686915 GCTAAACAGAAGCATGGCATCT 59.313 45.455 0.00 0.00 37.06 2.90
232 233 3.243002 GCTAAACAGAAGCATGGCATCTC 60.243 47.826 0.00 0.00 34.26 2.75
233 234 2.502142 AACAGAAGCATGGCATCTCA 57.498 45.000 0.00 0.00 34.26 3.27
234 235 2.730934 ACAGAAGCATGGCATCTCAT 57.269 45.000 0.00 0.00 34.26 2.90
235 236 2.298610 ACAGAAGCATGGCATCTCATG 58.701 47.619 0.00 3.91 45.26 3.07
248 249 4.601621 CATCTCATGCACAGACAGAAAG 57.398 45.455 0.00 0.00 0.00 2.62
249 250 2.420642 TCTCATGCACAGACAGAAAGC 58.579 47.619 0.00 0.00 0.00 3.51
250 251 2.038164 TCTCATGCACAGACAGAAAGCT 59.962 45.455 0.00 0.00 0.00 3.74
251 252 3.259123 TCTCATGCACAGACAGAAAGCTA 59.741 43.478 0.00 0.00 0.00 3.32
252 253 3.593096 TCATGCACAGACAGAAAGCTAG 58.407 45.455 0.00 0.00 0.00 3.42
253 254 3.259123 TCATGCACAGACAGAAAGCTAGA 59.741 43.478 0.00 0.00 0.00 2.43
254 255 3.309961 TGCACAGACAGAAAGCTAGAG 57.690 47.619 0.00 0.00 0.00 2.43
255 256 2.630098 TGCACAGACAGAAAGCTAGAGT 59.370 45.455 0.00 0.00 0.00 3.24
256 257 3.070159 TGCACAGACAGAAAGCTAGAGTT 59.930 43.478 0.00 0.00 0.00 3.01
257 258 4.061596 GCACAGACAGAAAGCTAGAGTTT 58.938 43.478 0.00 0.00 0.00 2.66
258 259 4.151512 GCACAGACAGAAAGCTAGAGTTTC 59.848 45.833 9.08 9.08 34.64 2.78
259 260 5.292765 CACAGACAGAAAGCTAGAGTTTCA 58.707 41.667 16.23 0.00 36.53 2.69
260 261 5.755375 CACAGACAGAAAGCTAGAGTTTCAA 59.245 40.000 16.23 0.00 36.53 2.69
261 262 6.426328 CACAGACAGAAAGCTAGAGTTTCAAT 59.574 38.462 16.23 7.06 36.53 2.57
262 263 7.600375 CACAGACAGAAAGCTAGAGTTTCAATA 59.400 37.037 16.23 0.00 36.53 1.90
263 264 8.317679 ACAGACAGAAAGCTAGAGTTTCAATAT 58.682 33.333 16.23 3.31 36.53 1.28
264 265 9.160496 CAGACAGAAAGCTAGAGTTTCAATATT 57.840 33.333 16.23 0.00 36.53 1.28
265 266 9.732130 AGACAGAAAGCTAGAGTTTCAATATTT 57.268 29.630 16.23 0.00 36.53 1.40
279 280 9.139174 AGTTTCAATATTTTTACAGATTTGCGG 57.861 29.630 0.00 0.00 0.00 5.69
280 281 8.379902 GTTTCAATATTTTTACAGATTTGCGGG 58.620 33.333 0.00 0.00 0.00 6.13
281 282 6.039616 TCAATATTTTTACAGATTTGCGGGC 58.960 36.000 0.00 0.00 0.00 6.13
282 283 2.734276 TTTTTACAGATTTGCGGGCC 57.266 45.000 0.00 0.00 0.00 5.80
283 284 0.892063 TTTTACAGATTTGCGGGCCC 59.108 50.000 13.57 13.57 0.00 5.80
284 285 1.309499 TTTACAGATTTGCGGGCCCG 61.309 55.000 40.26 40.26 43.09 6.13
294 295 2.045340 CGGGCCCGAATTCAACCT 60.045 61.111 41.82 0.00 42.83 3.50
295 296 2.112815 CGGGCCCGAATTCAACCTC 61.113 63.158 41.82 0.00 42.83 3.85
296 297 1.001393 GGGCCCGAATTCAACCTCA 60.001 57.895 5.69 0.00 0.00 3.86
297 298 0.610785 GGGCCCGAATTCAACCTCAA 60.611 55.000 5.69 0.00 0.00 3.02
298 299 0.811281 GGCCCGAATTCAACCTCAAG 59.189 55.000 6.22 0.00 0.00 3.02
299 300 1.613255 GGCCCGAATTCAACCTCAAGA 60.613 52.381 6.22 0.00 0.00 3.02
300 301 1.740025 GCCCGAATTCAACCTCAAGAG 59.260 52.381 6.22 0.00 0.00 2.85
328 329 7.593875 CAAAGATGGAAAAGTGTTTGACAAA 57.406 32.000 0.00 0.00 32.23 2.83
329 330 8.027440 CAAAGATGGAAAAGTGTTTGACAAAA 57.973 30.769 1.27 0.00 32.23 2.44
330 331 7.832503 AAGATGGAAAAGTGTTTGACAAAAG 57.167 32.000 1.27 0.00 0.00 2.27
331 332 5.812127 AGATGGAAAAGTGTTTGACAAAAGC 59.188 36.000 1.27 0.00 0.00 3.51
332 333 4.887748 TGGAAAAGTGTTTGACAAAAGCA 58.112 34.783 1.27 0.00 0.00 3.91
333 334 5.300752 TGGAAAAGTGTTTGACAAAAGCAA 58.699 33.333 1.27 0.00 0.00 3.91
334 335 5.936956 TGGAAAAGTGTTTGACAAAAGCAAT 59.063 32.000 1.27 0.00 0.00 3.56
335 336 6.091986 TGGAAAAGTGTTTGACAAAAGCAATC 59.908 34.615 1.27 0.00 0.00 2.67
336 337 6.421377 AAAAGTGTTTGACAAAAGCAATCC 57.579 33.333 1.27 0.00 0.00 3.01
337 338 4.058721 AGTGTTTGACAAAAGCAATCCC 57.941 40.909 1.27 0.00 0.00 3.85
338 339 3.450457 AGTGTTTGACAAAAGCAATCCCA 59.550 39.130 1.27 0.00 0.00 4.37
339 340 4.101430 AGTGTTTGACAAAAGCAATCCCAT 59.899 37.500 1.27 0.00 0.00 4.00
340 341 4.815846 GTGTTTGACAAAAGCAATCCCATT 59.184 37.500 1.27 0.00 0.00 3.16
341 342 5.050159 GTGTTTGACAAAAGCAATCCCATTC 60.050 40.000 1.27 0.00 0.00 2.67
342 343 5.163322 TGTTTGACAAAAGCAATCCCATTCT 60.163 36.000 1.27 0.00 0.00 2.40
343 344 5.549742 TTGACAAAAGCAATCCCATTCTT 57.450 34.783 0.00 0.00 0.00 2.52
344 345 5.138125 TGACAAAAGCAATCCCATTCTTC 57.862 39.130 0.00 0.00 0.00 2.87
345 346 4.834496 TGACAAAAGCAATCCCATTCTTCT 59.166 37.500 0.00 0.00 0.00 2.85
346 347 6.009589 TGACAAAAGCAATCCCATTCTTCTA 58.990 36.000 0.00 0.00 0.00 2.10
347 348 6.664816 TGACAAAAGCAATCCCATTCTTCTAT 59.335 34.615 0.00 0.00 0.00 1.98
348 349 7.105241 ACAAAAGCAATCCCATTCTTCTATC 57.895 36.000 0.00 0.00 0.00 2.08
349 350 6.894103 ACAAAAGCAATCCCATTCTTCTATCT 59.106 34.615 0.00 0.00 0.00 1.98
350 351 6.956202 AAAGCAATCCCATTCTTCTATCTG 57.044 37.500 0.00 0.00 0.00 2.90
351 352 4.396522 AGCAATCCCATTCTTCTATCTGC 58.603 43.478 0.00 0.00 0.00 4.26
352 353 3.505293 GCAATCCCATTCTTCTATCTGCC 59.495 47.826 0.00 0.00 0.00 4.85
353 354 4.722220 CAATCCCATTCTTCTATCTGCCA 58.278 43.478 0.00 0.00 0.00 4.92
354 355 5.135383 CAATCCCATTCTTCTATCTGCCAA 58.865 41.667 0.00 0.00 0.00 4.52
355 356 4.156455 TCCCATTCTTCTATCTGCCAAC 57.844 45.455 0.00 0.00 0.00 3.77
356 357 3.523157 TCCCATTCTTCTATCTGCCAACA 59.477 43.478 0.00 0.00 0.00 3.33
357 358 4.166725 TCCCATTCTTCTATCTGCCAACAT 59.833 41.667 0.00 0.00 0.00 2.71
358 359 4.518211 CCCATTCTTCTATCTGCCAACATC 59.482 45.833 0.00 0.00 0.00 3.06
359 360 5.128205 CCATTCTTCTATCTGCCAACATCA 58.872 41.667 0.00 0.00 0.00 3.07
360 361 5.591472 CCATTCTTCTATCTGCCAACATCAA 59.409 40.000 0.00 0.00 0.00 2.57
361 362 6.264744 CCATTCTTCTATCTGCCAACATCAAT 59.735 38.462 0.00 0.00 0.00 2.57
362 363 6.932356 TTCTTCTATCTGCCAACATCAATC 57.068 37.500 0.00 0.00 0.00 2.67
363 364 5.993055 TCTTCTATCTGCCAACATCAATCA 58.007 37.500 0.00 0.00 0.00 2.57
364 365 5.819379 TCTTCTATCTGCCAACATCAATCAC 59.181 40.000 0.00 0.00 0.00 3.06
365 366 5.101648 TCTATCTGCCAACATCAATCACA 57.898 39.130 0.00 0.00 0.00 3.58
366 367 5.499313 TCTATCTGCCAACATCAATCACAA 58.501 37.500 0.00 0.00 0.00 3.33
367 368 4.713824 ATCTGCCAACATCAATCACAAG 57.286 40.909 0.00 0.00 0.00 3.16
368 369 3.489355 TCTGCCAACATCAATCACAAGT 58.511 40.909 0.00 0.00 0.00 3.16
369 370 3.253921 TCTGCCAACATCAATCACAAGTG 59.746 43.478 0.00 0.00 0.00 3.16
370 371 3.220940 TGCCAACATCAATCACAAGTGA 58.779 40.909 5.24 5.24 44.59 3.41
371 372 3.635836 TGCCAACATCAATCACAAGTGAA 59.364 39.130 7.02 0.00 43.58 3.18
372 373 4.099113 TGCCAACATCAATCACAAGTGAAA 59.901 37.500 7.02 0.00 43.58 2.69
373 374 5.221481 TGCCAACATCAATCACAAGTGAAAT 60.221 36.000 7.02 0.00 43.58 2.17
374 375 5.119588 GCCAACATCAATCACAAGTGAAATG 59.880 40.000 7.02 12.70 43.58 2.32
375 376 6.218019 CCAACATCAATCACAAGTGAAATGT 58.782 36.000 16.69 16.69 43.58 2.71
376 377 6.702723 CCAACATCAATCACAAGTGAAATGTT 59.297 34.615 22.49 22.49 43.69 2.71
377 378 7.225145 CCAACATCAATCACAAGTGAAATGTTT 59.775 33.333 24.05 14.84 42.21 2.83
378 379 7.935338 ACATCAATCACAAGTGAAATGTTTC 57.065 32.000 16.69 0.00 43.58 2.78
379 380 6.925165 ACATCAATCACAAGTGAAATGTTTCC 59.075 34.615 16.69 0.00 43.58 3.13
380 381 6.462552 TCAATCACAAGTGAAATGTTTCCA 57.537 33.333 7.02 0.00 43.58 3.53
381 382 7.053316 TCAATCACAAGTGAAATGTTTCCAT 57.947 32.000 7.02 0.00 43.58 3.41
382 383 6.924612 TCAATCACAAGTGAAATGTTTCCATG 59.075 34.615 7.02 0.00 43.58 3.66
383 384 6.653526 ATCACAAGTGAAATGTTTCCATGA 57.346 33.333 7.02 1.45 43.58 3.07
384 385 6.462552 TCACAAGTGAAATGTTTCCATGAA 57.537 33.333 0.00 0.00 36.53 2.57
385 386 7.053316 TCACAAGTGAAATGTTTCCATGAAT 57.947 32.000 0.00 0.00 36.53 2.57
386 387 8.175925 TCACAAGTGAAATGTTTCCATGAATA 57.824 30.769 0.00 0.00 36.53 1.75
387 388 8.637099 TCACAAGTGAAATGTTTCCATGAATAA 58.363 29.630 0.00 0.00 36.53 1.40
388 389 8.918658 CACAAGTGAAATGTTTCCATGAATAAG 58.081 33.333 0.00 0.00 36.36 1.73
389 390 8.859090 ACAAGTGAAATGTTTCCATGAATAAGA 58.141 29.630 0.00 0.00 36.36 2.10
390 391 9.695526 CAAGTGAAATGTTTCCATGAATAAGAA 57.304 29.630 0.00 0.00 36.36 2.52
491 492 3.537206 AACCGGCCACTCTGCAGAC 62.537 63.158 13.74 2.47 0.00 3.51
546 593 2.743928 GCCAACTGACCGCTCCAG 60.744 66.667 0.00 0.00 37.64 3.86
548 595 2.031012 CAACTGACCGCTCCAGCA 59.969 61.111 0.00 0.00 42.21 4.41
624 674 1.351017 TCTTCCCAGCGGTTCAAATCT 59.649 47.619 0.00 0.00 0.00 2.40
626 676 0.984230 TCCCAGCGGTTCAAATCTCT 59.016 50.000 0.00 0.00 0.00 3.10
663 713 3.691342 CGGACGAACCAGCTCCCA 61.691 66.667 0.00 0.00 38.90 4.37
1232 4512 1.267574 TGCTAGGCTTCACTCCCAGG 61.268 60.000 0.00 0.00 0.00 4.45
1237 4526 0.035343 GGCTTCACTCCCAGGTTACC 60.035 60.000 0.00 0.00 0.00 2.85
1974 5640 2.558359 ACTTACAAGGATGGCTTGTTGC 59.442 45.455 0.00 0.00 41.66 4.17
2520 8380 0.182299 CTTGGCTTCAGGGGGAGATC 59.818 60.000 0.00 0.00 0.00 2.75
2918 12275 1.737838 TTCTCGCATTGGCTAGTTGG 58.262 50.000 0.00 0.00 38.10 3.77
2977 12334 4.102524 TGGTAACTCAAAAGAGCCTGAAGA 59.897 41.667 0.00 0.00 37.61 2.87
2978 12335 5.221925 TGGTAACTCAAAAGAGCCTGAAGAT 60.222 40.000 0.00 0.00 37.61 2.40
2979 12336 6.013725 TGGTAACTCAAAAGAGCCTGAAGATA 60.014 38.462 0.00 0.00 37.61 1.98
3015 12372 6.945435 TGGAAATTTGCCTATCTCACAGTTAA 59.055 34.615 7.27 0.00 0.00 2.01
3016 12373 7.094377 TGGAAATTTGCCTATCTCACAGTTAAC 60.094 37.037 7.27 0.00 0.00 2.01
3109 12506 6.107901 AGAATCCAGTAATAGACTCCATGC 57.892 41.667 0.00 0.00 35.64 4.06
3110 12507 5.843421 AGAATCCAGTAATAGACTCCATGCT 59.157 40.000 0.00 0.00 35.64 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.124036 AGATGGAGTACTTGCTCTACTCT 57.876 43.478 0.00 0.00 40.01 3.24
3 4 6.613153 AAAAGATGGAGTACTTGCTCTACT 57.387 37.500 0.00 0.00 35.89 2.57
6 7 8.325046 AGATTAAAAAGATGGAGTACTTGCTCT 58.675 33.333 0.00 0.00 35.89 4.09
7 8 8.499403 AGATTAAAAAGATGGAGTACTTGCTC 57.501 34.615 0.00 0.00 34.89 4.26
8 9 8.325046 AGAGATTAAAAAGATGGAGTACTTGCT 58.675 33.333 0.00 0.00 0.00 3.91
9 10 8.394121 CAGAGATTAAAAAGATGGAGTACTTGC 58.606 37.037 0.00 0.00 0.00 4.01
10 11 8.887717 CCAGAGATTAAAAAGATGGAGTACTTG 58.112 37.037 0.00 0.00 0.00 3.16
11 12 8.826765 TCCAGAGATTAAAAAGATGGAGTACTT 58.173 33.333 0.00 0.00 31.89 2.24
12 13 8.380742 TCCAGAGATTAAAAAGATGGAGTACT 57.619 34.615 0.00 0.00 31.89 2.73
13 14 9.449719 TTTCCAGAGATTAAAAAGATGGAGTAC 57.550 33.333 0.00 0.00 36.75 2.73
14 15 9.672673 CTTTCCAGAGATTAAAAAGATGGAGTA 57.327 33.333 0.00 0.00 36.75 2.59
15 16 7.613411 CCTTTCCAGAGATTAAAAAGATGGAGT 59.387 37.037 0.00 0.00 36.75 3.85
16 17 7.831193 TCCTTTCCAGAGATTAAAAAGATGGAG 59.169 37.037 0.00 0.00 36.75 3.86
17 18 7.698912 TCCTTTCCAGAGATTAAAAAGATGGA 58.301 34.615 0.00 0.00 33.68 3.41
18 19 7.944729 TCCTTTCCAGAGATTAAAAAGATGG 57.055 36.000 0.00 0.00 0.00 3.51
26 27 9.462606 GGACTTTTATTCCTTTCCAGAGATTAA 57.537 33.333 0.00 0.00 0.00 1.40
27 28 8.611257 TGGACTTTTATTCCTTTCCAGAGATTA 58.389 33.333 0.00 0.00 33.84 1.75
28 29 7.394641 GTGGACTTTTATTCCTTTCCAGAGATT 59.605 37.037 0.00 0.00 33.80 2.40
29 30 6.887002 GTGGACTTTTATTCCTTTCCAGAGAT 59.113 38.462 0.00 0.00 33.80 2.75
30 31 6.044404 AGTGGACTTTTATTCCTTTCCAGAGA 59.956 38.462 0.00 0.00 33.80 3.10
31 32 6.241645 AGTGGACTTTTATTCCTTTCCAGAG 58.758 40.000 0.00 0.00 33.80 3.35
32 33 6.200878 AGTGGACTTTTATTCCTTTCCAGA 57.799 37.500 0.00 0.00 33.80 3.86
33 34 6.901081 AAGTGGACTTTTATTCCTTTCCAG 57.099 37.500 0.00 0.00 33.80 3.86
34 35 7.523415 ACTAAGTGGACTTTTATTCCTTTCCA 58.477 34.615 0.00 0.00 37.40 3.53
35 36 7.997773 ACTAAGTGGACTTTTATTCCTTTCC 57.002 36.000 0.00 0.00 37.40 3.13
37 38 9.011095 GCTTACTAAGTGGACTTTTATTCCTTT 57.989 33.333 0.00 0.00 37.40 3.11
38 39 7.610692 GGCTTACTAAGTGGACTTTTATTCCTT 59.389 37.037 0.00 0.00 37.40 3.36
39 40 7.110810 GGCTTACTAAGTGGACTTTTATTCCT 58.889 38.462 0.00 0.00 37.40 3.36
40 41 6.882678 TGGCTTACTAAGTGGACTTTTATTCC 59.117 38.462 0.00 0.00 37.40 3.01
41 42 7.916914 TGGCTTACTAAGTGGACTTTTATTC 57.083 36.000 0.00 0.00 37.40 1.75
42 43 8.700439 TTTGGCTTACTAAGTGGACTTTTATT 57.300 30.769 0.00 0.00 37.40 1.40
43 44 8.700439 TTTTGGCTTACTAAGTGGACTTTTAT 57.300 30.769 0.00 0.00 37.40 1.40
44 45 8.522542 TTTTTGGCTTACTAAGTGGACTTTTA 57.477 30.769 0.00 0.00 37.40 1.52
45 46 7.340999 TCTTTTTGGCTTACTAAGTGGACTTTT 59.659 33.333 0.00 0.00 37.40 2.27
46 47 6.831868 TCTTTTTGGCTTACTAAGTGGACTTT 59.168 34.615 0.00 0.00 37.40 2.66
47 48 6.262496 GTCTTTTTGGCTTACTAAGTGGACTT 59.738 38.462 0.00 0.00 39.85 3.01
48 49 5.763698 GTCTTTTTGGCTTACTAAGTGGACT 59.236 40.000 0.00 0.00 0.00 3.85
49 50 5.529800 TGTCTTTTTGGCTTACTAAGTGGAC 59.470 40.000 0.00 0.00 0.00 4.02
50 51 5.686753 TGTCTTTTTGGCTTACTAAGTGGA 58.313 37.500 0.00 0.00 0.00 4.02
51 52 6.385649 TTGTCTTTTTGGCTTACTAAGTGG 57.614 37.500 0.00 0.00 0.00 4.00
52 53 8.784043 ACTATTGTCTTTTTGGCTTACTAAGTG 58.216 33.333 0.00 0.00 0.00 3.16
53 54 8.919777 ACTATTGTCTTTTTGGCTTACTAAGT 57.080 30.769 0.00 0.00 0.00 2.24
70 71 6.536582 TCAGCTGAATTAAGCAGACTATTGTC 59.463 38.462 15.67 0.00 46.08 3.18
71 72 6.409704 TCAGCTGAATTAAGCAGACTATTGT 58.590 36.000 15.67 0.00 46.08 2.71
72 73 6.915544 TCAGCTGAATTAAGCAGACTATTG 57.084 37.500 15.67 4.73 46.08 1.90
73 74 7.108847 AGTTCAGCTGAATTAAGCAGACTATT 58.891 34.615 30.65 0.00 46.08 1.73
74 75 6.648192 AGTTCAGCTGAATTAAGCAGACTAT 58.352 36.000 30.65 0.51 46.08 2.12
75 76 6.042638 AGTTCAGCTGAATTAAGCAGACTA 57.957 37.500 30.65 1.84 46.08 2.59
76 77 4.904241 AGTTCAGCTGAATTAAGCAGACT 58.096 39.130 30.65 17.83 46.08 3.24
77 78 4.934602 AGAGTTCAGCTGAATTAAGCAGAC 59.065 41.667 30.65 15.87 46.08 3.51
78 79 5.157940 AGAGTTCAGCTGAATTAAGCAGA 57.842 39.130 30.65 11.63 46.08 4.26
79 80 5.876612 AAGAGTTCAGCTGAATTAAGCAG 57.123 39.130 30.65 9.24 46.08 4.24
80 81 7.744087 TTAAAGAGTTCAGCTGAATTAAGCA 57.256 32.000 30.65 13.36 46.08 3.91
81 82 7.912773 GGATTAAAGAGTTCAGCTGAATTAAGC 59.087 37.037 30.65 27.73 43.88 3.09
82 83 8.401709 GGGATTAAAGAGTTCAGCTGAATTAAG 58.598 37.037 30.65 0.00 36.33 1.85
83 84 8.109634 AGGGATTAAAGAGTTCAGCTGAATTAA 58.890 33.333 30.65 26.98 36.33 1.40
84 85 7.554118 CAGGGATTAAAGAGTTCAGCTGAATTA 59.446 37.037 30.65 21.19 36.33 1.40
85 86 6.376581 CAGGGATTAAAGAGTTCAGCTGAATT 59.623 38.462 30.65 26.79 36.33 2.17
86 87 5.884792 CAGGGATTAAAGAGTTCAGCTGAAT 59.115 40.000 30.65 19.40 36.33 2.57
87 88 5.248640 CAGGGATTAAAGAGTTCAGCTGAA 58.751 41.667 25.16 25.16 0.00 3.02
88 89 4.323792 CCAGGGATTAAAGAGTTCAGCTGA 60.324 45.833 13.74 13.74 0.00 4.26
89 90 3.944015 CCAGGGATTAAAGAGTTCAGCTG 59.056 47.826 7.63 7.63 0.00 4.24
90 91 3.623453 GCCAGGGATTAAAGAGTTCAGCT 60.623 47.826 0.00 0.00 0.00 4.24
91 92 2.685388 GCCAGGGATTAAAGAGTTCAGC 59.315 50.000 0.00 0.00 0.00 4.26
92 93 4.227864 AGCCAGGGATTAAAGAGTTCAG 57.772 45.455 0.00 0.00 0.00 3.02
93 94 4.783227 ACTAGCCAGGGATTAAAGAGTTCA 59.217 41.667 0.00 0.00 0.00 3.18
94 95 5.360649 ACTAGCCAGGGATTAAAGAGTTC 57.639 43.478 0.00 0.00 0.00 3.01
95 96 6.214819 TGTTACTAGCCAGGGATTAAAGAGTT 59.785 38.462 0.00 0.00 0.00 3.01
96 97 5.724854 TGTTACTAGCCAGGGATTAAAGAGT 59.275 40.000 0.00 0.00 0.00 3.24
97 98 6.235231 TGTTACTAGCCAGGGATTAAAGAG 57.765 41.667 0.00 0.00 0.00 2.85
98 99 6.409234 CCATGTTACTAGCCAGGGATTAAAGA 60.409 42.308 3.04 0.00 34.51 2.52
99 100 5.765182 CCATGTTACTAGCCAGGGATTAAAG 59.235 44.000 3.04 0.00 34.51 1.85
100 101 5.192923 ACCATGTTACTAGCCAGGGATTAAA 59.807 40.000 13.36 0.00 36.09 1.52
101 102 4.724798 ACCATGTTACTAGCCAGGGATTAA 59.275 41.667 13.36 0.00 36.09 1.40
102 103 4.102524 CACCATGTTACTAGCCAGGGATTA 59.897 45.833 13.36 0.00 36.09 1.75
103 104 3.117888 CACCATGTTACTAGCCAGGGATT 60.118 47.826 13.36 0.00 36.09 3.01
104 105 2.439507 CACCATGTTACTAGCCAGGGAT 59.560 50.000 13.36 0.00 36.09 3.85
105 106 1.837439 CACCATGTTACTAGCCAGGGA 59.163 52.381 13.36 0.00 36.09 4.20
106 107 1.559682 ACACCATGTTACTAGCCAGGG 59.440 52.381 6.76 6.76 38.45 4.45
107 108 2.236146 TCACACCATGTTACTAGCCAGG 59.764 50.000 0.00 0.00 0.00 4.45
108 109 3.610040 TCACACCATGTTACTAGCCAG 57.390 47.619 0.00 0.00 0.00 4.85
109 110 4.568072 ATTCACACCATGTTACTAGCCA 57.432 40.909 0.00 0.00 0.00 4.75
110 111 4.700213 ACAATTCACACCATGTTACTAGCC 59.300 41.667 0.00 0.00 0.00 3.93
111 112 5.411361 TCACAATTCACACCATGTTACTAGC 59.589 40.000 0.00 0.00 0.00 3.42
112 113 7.433708 TTCACAATTCACACCATGTTACTAG 57.566 36.000 0.00 0.00 0.00 2.57
113 114 7.663493 TCATTCACAATTCACACCATGTTACTA 59.337 33.333 0.00 0.00 0.00 1.82
114 115 6.489700 TCATTCACAATTCACACCATGTTACT 59.510 34.615 0.00 0.00 0.00 2.24
115 116 6.676950 TCATTCACAATTCACACCATGTTAC 58.323 36.000 0.00 0.00 0.00 2.50
116 117 6.570186 GCTCATTCACAATTCACACCATGTTA 60.570 38.462 0.00 0.00 0.00 2.41
117 118 5.775686 CTCATTCACAATTCACACCATGTT 58.224 37.500 0.00 0.00 0.00 2.71
118 119 4.321452 GCTCATTCACAATTCACACCATGT 60.321 41.667 0.00 0.00 0.00 3.21
119 120 4.082408 AGCTCATTCACAATTCACACCATG 60.082 41.667 0.00 0.00 0.00 3.66
120 121 4.084287 AGCTCATTCACAATTCACACCAT 58.916 39.130 0.00 0.00 0.00 3.55
121 122 3.489355 AGCTCATTCACAATTCACACCA 58.511 40.909 0.00 0.00 0.00 4.17
122 123 4.232221 CAAGCTCATTCACAATTCACACC 58.768 43.478 0.00 0.00 0.00 4.16
123 124 3.671928 GCAAGCTCATTCACAATTCACAC 59.328 43.478 0.00 0.00 0.00 3.82
124 125 3.318557 TGCAAGCTCATTCACAATTCACA 59.681 39.130 0.00 0.00 0.00 3.58
125 126 3.904571 TGCAAGCTCATTCACAATTCAC 58.095 40.909 0.00 0.00 0.00 3.18
126 127 4.794278 ATGCAAGCTCATTCACAATTCA 57.206 36.364 0.00 0.00 0.00 2.57
127 128 7.490079 TCAAATATGCAAGCTCATTCACAATTC 59.510 33.333 0.00 0.00 0.00 2.17
128 129 7.324935 TCAAATATGCAAGCTCATTCACAATT 58.675 30.769 0.00 0.00 0.00 2.32
129 130 6.869695 TCAAATATGCAAGCTCATTCACAAT 58.130 32.000 0.00 0.00 0.00 2.71
130 131 6.071784 ACTCAAATATGCAAGCTCATTCACAA 60.072 34.615 0.00 0.00 0.00 3.33
131 132 5.416639 ACTCAAATATGCAAGCTCATTCACA 59.583 36.000 0.00 0.00 0.00 3.58
132 133 5.888105 ACTCAAATATGCAAGCTCATTCAC 58.112 37.500 0.00 0.00 0.00 3.18
133 134 5.066893 GGACTCAAATATGCAAGCTCATTCA 59.933 40.000 0.00 0.00 0.00 2.57
134 135 5.066893 TGGACTCAAATATGCAAGCTCATTC 59.933 40.000 0.00 0.00 0.00 2.67
135 136 4.951715 TGGACTCAAATATGCAAGCTCATT 59.048 37.500 0.00 0.00 0.00 2.57
136 137 4.337555 GTGGACTCAAATATGCAAGCTCAT 59.662 41.667 0.00 0.00 0.00 2.90
137 138 3.691118 GTGGACTCAAATATGCAAGCTCA 59.309 43.478 0.00 0.00 0.00 4.26
138 139 3.691118 TGTGGACTCAAATATGCAAGCTC 59.309 43.478 0.00 0.00 0.00 4.09
139 140 3.441572 GTGTGGACTCAAATATGCAAGCT 59.558 43.478 0.00 0.00 0.00 3.74
140 141 3.191162 TGTGTGGACTCAAATATGCAAGC 59.809 43.478 0.00 0.00 0.00 4.01
141 142 5.571784 ATGTGTGGACTCAAATATGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
142 143 7.643569 AATATGTGTGGACTCAAATATGCAA 57.356 32.000 0.00 0.00 31.11 4.08
143 144 7.643569 AAATATGTGTGGACTCAAATATGCA 57.356 32.000 0.00 0.00 31.11 3.96
144 145 8.190122 TCAAAATATGTGTGGACTCAAATATGC 58.810 33.333 0.00 0.00 31.11 3.14
145 146 9.726232 CTCAAAATATGTGTGGACTCAAATATG 57.274 33.333 0.00 0.00 31.11 1.78
146 147 8.408601 GCTCAAAATATGTGTGGACTCAAATAT 58.591 33.333 0.00 0.00 31.74 1.28
147 148 7.148086 GGCTCAAAATATGTGTGGACTCAAATA 60.148 37.037 0.00 0.00 0.00 1.40
148 149 6.350445 GGCTCAAAATATGTGTGGACTCAAAT 60.350 38.462 0.00 0.00 0.00 2.32
149 150 5.048083 GGCTCAAAATATGTGTGGACTCAAA 60.048 40.000 0.00 0.00 0.00 2.69
150 151 4.458989 GGCTCAAAATATGTGTGGACTCAA 59.541 41.667 0.00 0.00 0.00 3.02
151 152 4.009675 GGCTCAAAATATGTGTGGACTCA 58.990 43.478 0.00 0.00 0.00 3.41
152 153 3.063997 CGGCTCAAAATATGTGTGGACTC 59.936 47.826 0.00 0.00 0.00 3.36
153 154 3.009723 CGGCTCAAAATATGTGTGGACT 58.990 45.455 0.00 0.00 0.00 3.85
154 155 3.006940 TCGGCTCAAAATATGTGTGGAC 58.993 45.455 0.00 0.00 0.00 4.02
155 156 3.055458 TCTCGGCTCAAAATATGTGTGGA 60.055 43.478 0.00 0.00 0.00 4.02
156 157 3.270027 TCTCGGCTCAAAATATGTGTGG 58.730 45.455 0.00 0.00 0.00 4.17
157 158 4.944962 TTCTCGGCTCAAAATATGTGTG 57.055 40.909 0.00 0.00 0.00 3.82
158 159 6.515272 AAATTCTCGGCTCAAAATATGTGT 57.485 33.333 0.00 0.00 0.00 3.72
159 160 6.195244 CGAAAATTCTCGGCTCAAAATATGTG 59.805 38.462 0.00 0.00 35.14 3.21
160 161 6.258160 CGAAAATTCTCGGCTCAAAATATGT 58.742 36.000 0.00 0.00 35.14 2.29
161 162 6.722972 CGAAAATTCTCGGCTCAAAATATG 57.277 37.500 0.00 0.00 35.14 1.78
173 174 5.388111 GGAAGTTTTACCCGAAAATTCTCG 58.612 41.667 9.44 0.00 41.07 4.04
174 175 5.388111 CGGAAGTTTTACCCGAAAATTCTC 58.612 41.667 9.44 1.88 45.58 2.87
175 176 4.216902 CCGGAAGTTTTACCCGAAAATTCT 59.783 41.667 0.00 0.00 45.58 2.40
176 177 4.478699 CCGGAAGTTTTACCCGAAAATTC 58.521 43.478 0.00 2.90 45.58 2.17
177 178 3.256383 CCCGGAAGTTTTACCCGAAAATT 59.744 43.478 0.73 0.00 45.58 1.82
178 179 2.821378 CCCGGAAGTTTTACCCGAAAAT 59.179 45.455 0.73 0.00 45.58 1.82
179 180 2.228925 CCCGGAAGTTTTACCCGAAAA 58.771 47.619 0.73 0.00 45.58 2.29
180 181 1.545204 CCCCGGAAGTTTTACCCGAAA 60.545 52.381 0.73 0.00 45.58 3.46
181 182 0.036590 CCCCGGAAGTTTTACCCGAA 59.963 55.000 0.73 0.00 45.58 4.30
182 183 0.835543 TCCCCGGAAGTTTTACCCGA 60.836 55.000 0.73 0.00 45.58 5.14
183 184 0.392060 CTCCCCGGAAGTTTTACCCG 60.392 60.000 0.73 0.00 42.64 5.28
184 185 0.986527 TCTCCCCGGAAGTTTTACCC 59.013 55.000 0.73 0.00 0.00 3.69
185 186 3.276857 GAATCTCCCCGGAAGTTTTACC 58.723 50.000 0.73 0.00 0.00 2.85
186 187 3.276857 GGAATCTCCCCGGAAGTTTTAC 58.723 50.000 0.73 0.00 0.00 2.01
187 188 2.093341 CGGAATCTCCCCGGAAGTTTTA 60.093 50.000 0.73 0.00 43.05 1.52
188 189 1.339727 CGGAATCTCCCCGGAAGTTTT 60.340 52.381 0.73 0.00 43.05 2.43
189 190 0.252197 CGGAATCTCCCCGGAAGTTT 59.748 55.000 0.73 1.03 43.05 2.66
190 191 1.905512 CGGAATCTCCCCGGAAGTT 59.094 57.895 0.73 0.00 43.05 2.66
191 192 3.630289 CGGAATCTCCCCGGAAGT 58.370 61.111 0.73 0.00 43.05 3.01
196 197 1.692173 TTTAGCCCGGAATCTCCCCG 61.692 60.000 0.73 0.00 46.10 5.73
197 198 0.179026 GTTTAGCCCGGAATCTCCCC 60.179 60.000 0.73 0.00 31.13 4.81
198 199 0.544697 TGTTTAGCCCGGAATCTCCC 59.455 55.000 0.73 0.00 31.13 4.30
199 200 1.485066 TCTGTTTAGCCCGGAATCTCC 59.515 52.381 0.73 0.00 0.00 3.71
200 201 2.981859 TCTGTTTAGCCCGGAATCTC 57.018 50.000 0.73 0.00 0.00 2.75
201 202 2.681097 GCTTCTGTTTAGCCCGGAATCT 60.681 50.000 0.73 0.00 32.45 2.40
202 203 1.671328 GCTTCTGTTTAGCCCGGAATC 59.329 52.381 0.73 0.00 32.45 2.52
203 204 1.004277 TGCTTCTGTTTAGCCCGGAAT 59.996 47.619 0.73 0.00 37.85 3.01
204 205 0.398696 TGCTTCTGTTTAGCCCGGAA 59.601 50.000 0.73 0.00 37.85 4.30
205 206 0.618458 ATGCTTCTGTTTAGCCCGGA 59.382 50.000 0.73 0.00 37.85 5.14
206 207 0.734889 CATGCTTCTGTTTAGCCCGG 59.265 55.000 0.00 0.00 37.85 5.73
207 208 0.734889 CCATGCTTCTGTTTAGCCCG 59.265 55.000 0.00 0.00 37.85 6.13
208 209 0.457443 GCCATGCTTCTGTTTAGCCC 59.543 55.000 0.00 0.00 37.85 5.19
209 210 1.176527 TGCCATGCTTCTGTTTAGCC 58.823 50.000 0.00 0.00 37.85 3.93
210 211 2.686915 AGATGCCATGCTTCTGTTTAGC 59.313 45.455 3.95 0.00 40.65 3.09
211 212 3.943381 TGAGATGCCATGCTTCTGTTTAG 59.057 43.478 8.94 0.00 41.89 1.85
212 213 3.954200 TGAGATGCCATGCTTCTGTTTA 58.046 40.909 8.94 0.00 41.89 2.01
213 214 2.799017 TGAGATGCCATGCTTCTGTTT 58.201 42.857 8.94 0.00 41.89 2.83
214 215 2.502142 TGAGATGCCATGCTTCTGTT 57.498 45.000 8.94 0.00 41.89 3.16
215 216 2.298610 CATGAGATGCCATGCTTCTGT 58.701 47.619 8.94 0.00 41.89 3.41
227 228 3.181509 GCTTTCTGTCTGTGCATGAGATG 60.182 47.826 0.00 0.00 0.00 2.90
228 229 3.008330 GCTTTCTGTCTGTGCATGAGAT 58.992 45.455 0.00 0.00 0.00 2.75
229 230 2.038164 AGCTTTCTGTCTGTGCATGAGA 59.962 45.455 0.00 0.00 0.00 3.27
230 231 2.424557 AGCTTTCTGTCTGTGCATGAG 58.575 47.619 0.00 0.00 0.00 2.90
231 232 2.556144 AGCTTTCTGTCTGTGCATGA 57.444 45.000 0.00 0.00 0.00 3.07
232 233 3.593096 TCTAGCTTTCTGTCTGTGCATG 58.407 45.455 0.00 0.00 0.00 4.06
233 234 3.260380 ACTCTAGCTTTCTGTCTGTGCAT 59.740 43.478 0.00 0.00 0.00 3.96
234 235 2.630098 ACTCTAGCTTTCTGTCTGTGCA 59.370 45.455 0.00 0.00 0.00 4.57
235 236 3.311486 ACTCTAGCTTTCTGTCTGTGC 57.689 47.619 0.00 0.00 0.00 4.57
236 237 5.292765 TGAAACTCTAGCTTTCTGTCTGTG 58.707 41.667 0.00 0.00 0.00 3.66
237 238 5.537300 TGAAACTCTAGCTTTCTGTCTGT 57.463 39.130 0.00 0.00 0.00 3.41
238 239 8.715191 ATATTGAAACTCTAGCTTTCTGTCTG 57.285 34.615 0.00 0.00 0.00 3.51
239 240 9.732130 AAATATTGAAACTCTAGCTTTCTGTCT 57.268 29.630 0.00 0.00 0.00 3.41
253 254 9.139174 CCGCAAATCTGTAAAAATATTGAAACT 57.861 29.630 0.00 0.00 0.00 2.66
254 255 8.379902 CCCGCAAATCTGTAAAAATATTGAAAC 58.620 33.333 0.00 0.00 0.00 2.78
255 256 7.064016 GCCCGCAAATCTGTAAAAATATTGAAA 59.936 33.333 0.00 0.00 0.00 2.69
256 257 6.533367 GCCCGCAAATCTGTAAAAATATTGAA 59.467 34.615 0.00 0.00 0.00 2.69
257 258 6.039616 GCCCGCAAATCTGTAAAAATATTGA 58.960 36.000 0.00 0.00 0.00 2.57
258 259 5.234116 GGCCCGCAAATCTGTAAAAATATTG 59.766 40.000 0.00 0.00 0.00 1.90
259 260 5.356426 GGCCCGCAAATCTGTAAAAATATT 58.644 37.500 0.00 0.00 0.00 1.28
260 261 4.202212 GGGCCCGCAAATCTGTAAAAATAT 60.202 41.667 5.69 0.00 0.00 1.28
261 262 3.131400 GGGCCCGCAAATCTGTAAAAATA 59.869 43.478 5.69 0.00 0.00 1.40
262 263 2.093711 GGGCCCGCAAATCTGTAAAAAT 60.094 45.455 5.69 0.00 0.00 1.82
263 264 1.273886 GGGCCCGCAAATCTGTAAAAA 59.726 47.619 5.69 0.00 0.00 1.94
264 265 0.892063 GGGCCCGCAAATCTGTAAAA 59.108 50.000 5.69 0.00 0.00 1.52
265 266 1.309499 CGGGCCCGCAAATCTGTAAA 61.309 55.000 34.96 0.00 0.00 2.01
266 267 1.747367 CGGGCCCGCAAATCTGTAA 60.747 57.895 34.96 0.00 0.00 2.41
267 268 2.124901 CGGGCCCGCAAATCTGTA 60.125 61.111 34.96 0.00 0.00 2.74
268 269 2.837031 ATTCGGGCCCGCAAATCTGT 62.837 55.000 39.89 9.86 39.59 3.41
269 270 1.666209 AATTCGGGCCCGCAAATCTG 61.666 55.000 39.89 11.44 39.59 2.90
270 271 1.379843 AATTCGGGCCCGCAAATCT 60.380 52.632 39.89 20.06 39.59 2.40
271 272 1.065764 GAATTCGGGCCCGCAAATC 59.934 57.895 39.89 28.36 39.59 2.17
272 273 1.254284 TTGAATTCGGGCCCGCAAAT 61.254 50.000 39.89 30.06 39.59 2.32
273 274 1.903890 TTGAATTCGGGCCCGCAAA 60.904 52.632 39.89 29.17 39.59 3.68
274 275 2.282532 TTGAATTCGGGCCCGCAA 60.283 55.556 39.89 31.62 39.59 4.85
275 276 3.059386 GTTGAATTCGGGCCCGCA 61.059 61.111 39.89 31.50 39.59 5.69
276 277 3.822192 GGTTGAATTCGGGCCCGC 61.822 66.667 39.89 25.37 39.59 6.13
277 278 2.045340 AGGTTGAATTCGGGCCCG 60.045 61.111 39.13 39.13 41.35 6.13
278 279 0.610785 TTGAGGTTGAATTCGGGCCC 60.611 55.000 13.57 13.57 0.00 5.80
279 280 0.811281 CTTGAGGTTGAATTCGGGCC 59.189 55.000 0.00 0.00 0.00 5.80
280 281 1.740025 CTCTTGAGGTTGAATTCGGGC 59.260 52.381 0.04 0.00 0.00 6.13
281 282 2.027192 TCCTCTTGAGGTTGAATTCGGG 60.027 50.000 15.44 0.00 0.00 5.14
282 283 3.003480 GTCCTCTTGAGGTTGAATTCGG 58.997 50.000 15.44 0.00 0.00 4.30
283 284 3.003480 GGTCCTCTTGAGGTTGAATTCG 58.997 50.000 15.44 0.00 0.00 3.34
284 285 4.021102 TGGTCCTCTTGAGGTTGAATTC 57.979 45.455 15.44 0.00 0.00 2.17
285 286 4.453480 TTGGTCCTCTTGAGGTTGAATT 57.547 40.909 15.44 0.00 0.00 2.17
286 287 4.104738 TCTTTGGTCCTCTTGAGGTTGAAT 59.895 41.667 15.44 0.00 0.00 2.57
287 288 3.458118 TCTTTGGTCCTCTTGAGGTTGAA 59.542 43.478 15.44 5.12 0.00 2.69
288 289 3.045634 TCTTTGGTCCTCTTGAGGTTGA 58.954 45.455 15.44 4.85 0.00 3.18
289 290 3.492102 TCTTTGGTCCTCTTGAGGTTG 57.508 47.619 15.44 2.94 0.00 3.77
290 291 3.245052 CCATCTTTGGTCCTCTTGAGGTT 60.245 47.826 15.44 0.00 38.30 3.50
291 292 2.307098 CCATCTTTGGTCCTCTTGAGGT 59.693 50.000 15.44 0.00 38.30 3.85
292 293 2.573462 TCCATCTTTGGTCCTCTTGAGG 59.427 50.000 10.28 10.28 44.06 3.86
293 294 3.988976 TCCATCTTTGGTCCTCTTGAG 57.011 47.619 0.00 0.00 44.06 3.02
294 295 4.722526 TTTCCATCTTTGGTCCTCTTGA 57.277 40.909 0.00 0.00 44.06 3.02
295 296 4.829492 ACTTTTCCATCTTTGGTCCTCTTG 59.171 41.667 0.00 0.00 44.06 3.02
296 297 4.829492 CACTTTTCCATCTTTGGTCCTCTT 59.171 41.667 0.00 0.00 44.06 2.85
297 298 4.141158 ACACTTTTCCATCTTTGGTCCTCT 60.141 41.667 0.00 0.00 44.06 3.69
298 299 4.145052 ACACTTTTCCATCTTTGGTCCTC 58.855 43.478 0.00 0.00 44.06 3.71
299 300 4.184649 ACACTTTTCCATCTTTGGTCCT 57.815 40.909 0.00 0.00 44.06 3.85
300 301 4.937201 AACACTTTTCCATCTTTGGTCC 57.063 40.909 0.00 0.00 44.06 4.46
301 302 5.748630 GTCAAACACTTTTCCATCTTTGGTC 59.251 40.000 0.00 0.00 44.06 4.02
302 303 5.186797 TGTCAAACACTTTTCCATCTTTGGT 59.813 36.000 0.00 0.00 44.06 3.67
303 304 5.659463 TGTCAAACACTTTTCCATCTTTGG 58.341 37.500 0.00 0.00 45.15 3.28
304 305 7.593875 TTTGTCAAACACTTTTCCATCTTTG 57.406 32.000 0.00 0.00 0.00 2.77
305 306 7.148423 GCTTTTGTCAAACACTTTTCCATCTTT 60.148 33.333 0.00 0.00 0.00 2.52
306 307 6.313658 GCTTTTGTCAAACACTTTTCCATCTT 59.686 34.615 0.00 0.00 0.00 2.40
307 308 5.812127 GCTTTTGTCAAACACTTTTCCATCT 59.188 36.000 0.00 0.00 0.00 2.90
308 309 5.580297 TGCTTTTGTCAAACACTTTTCCATC 59.420 36.000 0.00 0.00 0.00 3.51
309 310 5.486526 TGCTTTTGTCAAACACTTTTCCAT 58.513 33.333 0.00 0.00 0.00 3.41
310 311 4.887748 TGCTTTTGTCAAACACTTTTCCA 58.112 34.783 0.00 0.00 0.00 3.53
311 312 5.854431 TTGCTTTTGTCAAACACTTTTCC 57.146 34.783 0.00 0.00 0.00 3.13
312 313 6.456853 GGGATTGCTTTTGTCAAACACTTTTC 60.457 38.462 0.00 0.00 0.00 2.29
313 314 5.353956 GGGATTGCTTTTGTCAAACACTTTT 59.646 36.000 0.00 0.00 0.00 2.27
314 315 4.875536 GGGATTGCTTTTGTCAAACACTTT 59.124 37.500 0.00 0.00 0.00 2.66
315 316 4.081198 TGGGATTGCTTTTGTCAAACACTT 60.081 37.500 0.00 0.00 0.00 3.16
316 317 3.450457 TGGGATTGCTTTTGTCAAACACT 59.550 39.130 0.00 0.00 0.00 3.55
317 318 3.791245 TGGGATTGCTTTTGTCAAACAC 58.209 40.909 0.00 0.00 0.00 3.32
318 319 4.686191 ATGGGATTGCTTTTGTCAAACA 57.314 36.364 0.00 0.00 0.00 2.83
319 320 5.299949 AGAATGGGATTGCTTTTGTCAAAC 58.700 37.500 0.00 0.00 0.00 2.93
320 321 5.549742 AGAATGGGATTGCTTTTGTCAAA 57.450 34.783 0.00 0.00 0.00 2.69
321 322 5.305128 AGAAGAATGGGATTGCTTTTGTCAA 59.695 36.000 0.00 0.00 0.00 3.18
322 323 4.834496 AGAAGAATGGGATTGCTTTTGTCA 59.166 37.500 0.00 0.00 0.00 3.58
323 324 5.397142 AGAAGAATGGGATTGCTTTTGTC 57.603 39.130 0.00 0.00 0.00 3.18
324 325 6.894103 AGATAGAAGAATGGGATTGCTTTTGT 59.106 34.615 0.00 0.00 0.00 2.83
325 326 7.201145 CAGATAGAAGAATGGGATTGCTTTTG 58.799 38.462 0.00 0.00 0.00 2.44
326 327 6.183360 GCAGATAGAAGAATGGGATTGCTTTT 60.183 38.462 0.00 0.00 0.00 2.27
327 328 5.301298 GCAGATAGAAGAATGGGATTGCTTT 59.699 40.000 0.00 0.00 0.00 3.51
328 329 4.826183 GCAGATAGAAGAATGGGATTGCTT 59.174 41.667 0.00 0.00 0.00 3.91
329 330 4.396522 GCAGATAGAAGAATGGGATTGCT 58.603 43.478 0.00 0.00 0.00 3.91
330 331 3.505293 GGCAGATAGAAGAATGGGATTGC 59.495 47.826 0.00 0.00 0.00 3.56
331 332 4.722220 TGGCAGATAGAAGAATGGGATTG 58.278 43.478 0.00 0.00 0.00 2.67
332 333 5.136105 GTTGGCAGATAGAAGAATGGGATT 58.864 41.667 0.00 0.00 0.00 3.01
333 334 4.166725 TGTTGGCAGATAGAAGAATGGGAT 59.833 41.667 0.00 0.00 0.00 3.85
334 335 3.523157 TGTTGGCAGATAGAAGAATGGGA 59.477 43.478 0.00 0.00 0.00 4.37
335 336 3.889815 TGTTGGCAGATAGAAGAATGGG 58.110 45.455 0.00 0.00 0.00 4.00
336 337 5.128205 TGATGTTGGCAGATAGAAGAATGG 58.872 41.667 0.00 0.00 0.00 3.16
337 338 6.688637 TTGATGTTGGCAGATAGAAGAATG 57.311 37.500 0.00 0.00 0.00 2.67
338 339 7.013083 GTGATTGATGTTGGCAGATAGAAGAAT 59.987 37.037 0.00 0.00 0.00 2.40
339 340 6.317140 GTGATTGATGTTGGCAGATAGAAGAA 59.683 38.462 0.00 0.00 0.00 2.52
340 341 5.819379 GTGATTGATGTTGGCAGATAGAAGA 59.181 40.000 0.00 0.00 0.00 2.87
341 342 5.587443 TGTGATTGATGTTGGCAGATAGAAG 59.413 40.000 0.00 0.00 0.00 2.85
342 343 5.499313 TGTGATTGATGTTGGCAGATAGAA 58.501 37.500 0.00 0.00 0.00 2.10
343 344 5.101648 TGTGATTGATGTTGGCAGATAGA 57.898 39.130 0.00 0.00 0.00 1.98
344 345 5.356190 ACTTGTGATTGATGTTGGCAGATAG 59.644 40.000 0.00 0.00 0.00 2.08
345 346 5.124297 CACTTGTGATTGATGTTGGCAGATA 59.876 40.000 0.00 0.00 0.00 1.98
346 347 4.082408 CACTTGTGATTGATGTTGGCAGAT 60.082 41.667 0.00 0.00 0.00 2.90
347 348 3.253921 CACTTGTGATTGATGTTGGCAGA 59.746 43.478 0.00 0.00 0.00 4.26
348 349 3.253921 TCACTTGTGATTGATGTTGGCAG 59.746 43.478 0.00 0.00 0.00 4.85
349 350 3.220940 TCACTTGTGATTGATGTTGGCA 58.779 40.909 0.00 0.00 0.00 4.92
350 351 3.921119 TCACTTGTGATTGATGTTGGC 57.079 42.857 0.00 0.00 0.00 4.52
351 352 6.218019 ACATTTCACTTGTGATTGATGTTGG 58.782 36.000 16.05 1.42 0.00 3.77
352 353 7.703298 AACATTTCACTTGTGATTGATGTTG 57.297 32.000 23.61 11.44 28.45 3.33
353 354 7.439056 GGAAACATTTCACTTGTGATTGATGTT 59.561 33.333 21.27 21.27 38.92 2.71
354 355 6.925165 GGAAACATTTCACTTGTGATTGATGT 59.075 34.615 16.05 15.79 38.92 3.06
355 356 6.924612 TGGAAACATTTCACTTGTGATTGATG 59.075 34.615 16.05 15.35 38.92 3.07
356 357 7.053316 TGGAAACATTTCACTTGTGATTGAT 57.947 32.000 16.05 6.33 38.92 2.57
357 358 6.462552 TGGAAACATTTCACTTGTGATTGA 57.537 33.333 16.05 3.89 38.92 2.57
450 451 8.257306 GGTTTGGCCTAATGAATTTCTTATTCA 58.743 33.333 3.32 2.99 41.59 2.57
451 452 7.435192 CGGTTTGGCCTAATGAATTTCTTATTC 59.565 37.037 3.32 0.00 34.25 1.75
452 453 7.264947 CGGTTTGGCCTAATGAATTTCTTATT 58.735 34.615 3.32 0.00 34.25 1.40
453 454 6.183360 CCGGTTTGGCCTAATGAATTTCTTAT 60.183 38.462 3.32 0.00 34.25 1.73
454 455 5.126384 CCGGTTTGGCCTAATGAATTTCTTA 59.874 40.000 3.32 0.00 34.25 2.10
455 456 4.081697 CCGGTTTGGCCTAATGAATTTCTT 60.082 41.667 3.32 0.00 34.25 2.52
456 457 3.447229 CCGGTTTGGCCTAATGAATTTCT 59.553 43.478 3.32 0.00 34.25 2.52
457 458 3.780902 CCGGTTTGGCCTAATGAATTTC 58.219 45.455 3.32 0.00 34.25 2.17
458 459 3.885724 CCGGTTTGGCCTAATGAATTT 57.114 42.857 3.32 0.00 34.25 1.82
472 473 2.281761 CTGCAGAGTGGCCGGTTT 60.282 61.111 8.42 0.00 0.00 3.27
491 492 2.516906 TGGCCCATGCATACATACATG 58.483 47.619 0.00 0.00 42.67 3.21
538 585 4.767255 GGAGTGGTGCTGGAGCGG 62.767 72.222 0.00 0.00 45.83 5.52
606 656 1.351017 AGAGATTTGAACCGCTGGGAA 59.649 47.619 0.00 0.00 36.97 3.97
624 674 2.343758 GTGGCCAGCGAAGACAGA 59.656 61.111 5.11 0.00 0.00 3.41
626 676 2.031012 CTGTGGCCAGCGAAGACA 59.969 61.111 5.11 0.00 0.00 3.41
663 713 4.760047 CAGCCGCCTACCGCAACT 62.760 66.667 0.00 0.00 37.30 3.16
1232 4512 4.617223 GCTTTGCAGAATTTCTTCGGTAAC 59.383 41.667 0.00 0.00 32.73 2.50
1237 4526 4.151258 TCAGCTTTGCAGAATTTCTTCG 57.849 40.909 0.00 0.00 36.45 3.79
2251 5922 3.321682 CCCAAGAAACAACACATGGTCAT 59.678 43.478 0.00 0.00 0.00 3.06
2433 8292 1.294659 GACCAAAGCTGCGGAGACAG 61.295 60.000 8.65 0.00 40.80 3.51
2520 8380 5.291858 TGAATCCATCGATCTGTTTTCTTCG 59.708 40.000 0.00 0.00 0.00 3.79
2918 12275 4.218417 ACACAATCATTTTCTGTAGGTGGC 59.782 41.667 0.00 0.00 0.00 5.01
3139 12538 5.047092 GGGGGATTAGTCATTTGCAATATGG 60.047 44.000 16.44 2.50 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.