Multiple sequence alignment - TraesCS2D01G044400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G044400 chr2D 100.000 3573 0 0 1 3573 16056041 16059613 0.000000e+00 6599.0
1 TraesCS2D01G044400 chr2D 96.910 712 9 1 2862 3573 581069997 581069299 0.000000e+00 1181.0
2 TraesCS2D01G044400 chr2D 97.619 462 11 0 1 462 9525706 9526167 0.000000e+00 793.0
3 TraesCS2D01G044400 chr2D 79.583 240 39 10 1580 1814 6463316 6463550 2.850000e-36 163.0
4 TraesCS2D01G044400 chr2D 82.787 122 19 1 531 650 583586706 583586827 1.360000e-19 108.0
5 TraesCS2D01G044400 chr1D 94.498 727 16 2 2858 3573 438843980 438844693 0.000000e+00 1099.0
6 TraesCS2D01G044400 chr1D 93.084 723 26 6 2862 3573 66271038 66270329 0.000000e+00 1037.0
7 TraesCS2D01G044400 chr1D 97.539 447 11 0 1 447 59460034 59460480 0.000000e+00 765.0
8 TraesCS2D01G044400 chr1D 88.386 508 55 2 2075 2578 199624829 199625336 3.050000e-170 608.0
9 TraesCS2D01G044400 chr1D 81.759 614 55 32 886 1486 199623812 199624381 9.040000e-126 460.0
10 TraesCS2D01G044400 chr1D 91.968 249 20 0 1565 1813 199624493 199624741 2.040000e-92 350.0
11 TraesCS2D01G044400 chr2B 92.818 738 46 2 531 1261 28323379 28324116 0.000000e+00 1062.0
12 TraesCS2D01G044400 chr2B 88.165 583 61 3 2001 2577 28324792 28325372 0.000000e+00 688.0
13 TraesCS2D01G044400 chr2B 89.199 287 27 2 1534 1816 28324360 28324646 4.390000e-94 355.0
14 TraesCS2D01G044400 chr2B 74.082 490 89 31 1348 1814 544982009 544982483 2.210000e-37 167.0
15 TraesCS2D01G044400 chr2B 91.667 72 1 5 466 534 28323278 28323347 1.060000e-15 95.3
16 TraesCS2D01G044400 chr2B 97.778 45 1 0 1440 1484 28324216 28324260 1.060000e-10 78.7
17 TraesCS2D01G044400 chr6D 92.455 729 26 7 2861 3573 4684586 4683871 0.000000e+00 1014.0
18 TraesCS2D01G044400 chr6D 98.069 466 8 1 1 466 75868144 75868608 0.000000e+00 809.0
19 TraesCS2D01G044400 chr6D 98.253 458 8 0 1 458 181695811 181696268 0.000000e+00 802.0
20 TraesCS2D01G044400 chr6D 84.071 113 15 3 539 648 97659490 97659378 4.880000e-19 106.0
21 TraesCS2D01G044400 chr5A 90.456 723 45 2 2862 3573 36292579 36293288 0.000000e+00 931.0
22 TraesCS2D01G044400 chr5A 95.455 462 20 1 1 462 71470122 71470582 0.000000e+00 736.0
23 TraesCS2D01G044400 chr5A 89.441 161 17 0 1094 1254 454720211 454720371 1.680000e-48 204.0
24 TraesCS2D01G044400 chr1B 89.765 723 46 13 2864 3573 223544722 223544015 0.000000e+00 900.0
25 TraesCS2D01G044400 chr1B 89.173 508 51 2 2075 2578 280182853 280183360 6.510000e-177 630.0
26 TraesCS2D01G044400 chr1B 83.744 609 62 22 886 1485 280181819 280182399 3.140000e-150 542.0
27 TraesCS2D01G044400 chr1B 91.968 249 20 0 1565 1813 280182512 280182760 2.040000e-92 350.0
28 TraesCS2D01G044400 chr7A 90.571 700 33 6 2885 3573 44975618 44974941 0.000000e+00 896.0
29 TraesCS2D01G044400 chr7A 90.000 80 8 0 531 610 678930441 678930520 1.750000e-18 104.0
30 TraesCS2D01G044400 chr3A 89.088 724 54 5 2862 3573 571011282 571010572 0.000000e+00 876.0
31 TraesCS2D01G044400 chr3A 89.985 659 42 2 2926 3573 726509210 726508565 0.000000e+00 830.0
32 TraesCS2D01G044400 chr3B 93.015 587 22 4 2988 3573 222688847 222689415 0.000000e+00 839.0
33 TraesCS2D01G044400 chr3B 95.935 123 5 0 2861 2983 222677504 222677626 2.180000e-47 200.0
34 TraesCS2D01G044400 chr7B 89.985 659 42 2 2926 3573 468285346 468284701 0.000000e+00 830.0
35 TraesCS2D01G044400 chr7B 95.032 463 20 3 1 462 40344931 40344471 0.000000e+00 725.0
36 TraesCS2D01G044400 chr7B 83.459 133 17 5 536 664 293158412 293158543 6.270000e-23 119.0
37 TraesCS2D01G044400 chr7B 83.333 120 17 2 536 652 639271102 639270983 1.360000e-19 108.0
38 TraesCS2D01G044400 chr1A 82.947 950 99 45 886 1813 251376234 251377142 0.000000e+00 798.0
39 TraesCS2D01G044400 chr1A 88.583 508 54 2 2075 2578 251377230 251377737 6.560000e-172 614.0
40 TraesCS2D01G044400 chr5D 97.425 466 10 1 1 466 88170250 88170713 0.000000e+00 793.0
41 TraesCS2D01G044400 chr5D 90.446 157 15 0 1098 1254 353762844 353763000 1.300000e-49 207.0
42 TraesCS2D01G044400 chr2A 91.273 550 48 0 2028 2577 17955829 17956378 0.000000e+00 750.0
43 TraesCS2D01G044400 chr2A 86.513 608 51 12 880 1485 17954151 17954729 1.080000e-179 640.0
44 TraesCS2D01G044400 chr2A 86.313 453 45 12 2063 2505 17988287 17988732 8.970000e-131 477.0
45 TraesCS2D01G044400 chr2A 91.797 256 21 0 1561 1816 17954832 17955087 1.220000e-94 357.0
46 TraesCS2D01G044400 chr2A 80.417 240 39 8 1580 1815 607476716 607476951 3.670000e-40 176.0
47 TraesCS2D01G044400 chr4B 95.238 462 21 1 1 462 7468997 7469457 0.000000e+00 730.0
48 TraesCS2D01G044400 chr4A 94.816 463 24 0 1 463 673778463 673778925 0.000000e+00 723.0
49 TraesCS2D01G044400 chr5B 89.441 161 17 0 1094 1254 417874576 417874736 1.680000e-48 204.0
50 TraesCS2D01G044400 chr5B 82.927 123 17 3 531 650 658748161 658748282 1.360000e-19 108.0
51 TraesCS2D01G044400 chr5B 82.787 122 18 3 532 650 618269924 618270045 4.880000e-19 106.0
52 TraesCS2D01G044400 chr6A 87.574 169 20 1 1089 1256 430343396 430343228 1.010000e-45 195.0
53 TraesCS2D01G044400 chr6A 86.620 142 17 2 1344 1484 430343107 430342967 4.780000e-34 156.0
54 TraesCS2D01G044400 chr4D 80.349 229 35 10 1591 1814 461226297 461226520 7.940000e-37 165.0
55 TraesCS2D01G044400 chr4D 85.246 61 7 2 2431 2490 320211371 320211312 1.070000e-05 62.1
56 TraesCS2D01G044400 chrUn 82.787 122 19 2 531 650 112557365 112557244 1.360000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G044400 chr2D 16056041 16059613 3572 False 6599.000000 6599 100.0000 1 3573 1 chr2D.!!$F3 3572
1 TraesCS2D01G044400 chr2D 581069299 581069997 698 True 1181.000000 1181 96.9100 2862 3573 1 chr2D.!!$R1 711
2 TraesCS2D01G044400 chr1D 438843980 438844693 713 False 1099.000000 1099 94.4980 2858 3573 1 chr1D.!!$F2 715
3 TraesCS2D01G044400 chr1D 66270329 66271038 709 True 1037.000000 1037 93.0840 2862 3573 1 chr1D.!!$R1 711
4 TraesCS2D01G044400 chr1D 199623812 199625336 1524 False 472.666667 608 87.3710 886 2578 3 chr1D.!!$F3 1692
5 TraesCS2D01G044400 chr2B 28323278 28325372 2094 False 455.800000 1062 91.9254 466 2577 5 chr2B.!!$F2 2111
6 TraesCS2D01G044400 chr6D 4683871 4684586 715 True 1014.000000 1014 92.4550 2861 3573 1 chr6D.!!$R1 712
7 TraesCS2D01G044400 chr5A 36292579 36293288 709 False 931.000000 931 90.4560 2862 3573 1 chr5A.!!$F1 711
8 TraesCS2D01G044400 chr1B 223544015 223544722 707 True 900.000000 900 89.7650 2864 3573 1 chr1B.!!$R1 709
9 TraesCS2D01G044400 chr1B 280181819 280183360 1541 False 507.333333 630 88.2950 886 2578 3 chr1B.!!$F1 1692
10 TraesCS2D01G044400 chr7A 44974941 44975618 677 True 896.000000 896 90.5710 2885 3573 1 chr7A.!!$R1 688
11 TraesCS2D01G044400 chr3A 571010572 571011282 710 True 876.000000 876 89.0880 2862 3573 1 chr3A.!!$R1 711
12 TraesCS2D01G044400 chr3A 726508565 726509210 645 True 830.000000 830 89.9850 2926 3573 1 chr3A.!!$R2 647
13 TraesCS2D01G044400 chr3B 222688847 222689415 568 False 839.000000 839 93.0150 2988 3573 1 chr3B.!!$F2 585
14 TraesCS2D01G044400 chr7B 468284701 468285346 645 True 830.000000 830 89.9850 2926 3573 1 chr7B.!!$R2 647
15 TraesCS2D01G044400 chr1A 251376234 251377737 1503 False 706.000000 798 85.7650 886 2578 2 chr1A.!!$F1 1692
16 TraesCS2D01G044400 chr2A 17954151 17956378 2227 False 582.333333 750 89.8610 880 2577 3 chr2A.!!$F3 1697

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
105 106 0.041535 AACATCACCATGGCCACCAT 59.958 50.0 8.16 0.0 46.37 3.55 F
1364 1434 0.034089 TCTCAGGTGAGCATCTCGGA 60.034 55.0 1.81 0.0 41.80 4.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1601 1753 0.181350 CCCCTGGTACTCATGGAAGC 59.819 60.0 0.0 0.0 33.6 3.86 R
2658 3375 0.027586 GATAACAACCGCATCGCCAC 59.972 55.0 0.0 0.0 0.0 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.666253 TCTGCAAGGCCAGCACCC 62.666 66.667 17.76 0.00 37.02 4.61
18 19 4.980702 CTGCAAGGCCAGCACCCA 62.981 66.667 17.76 0.00 37.02 4.51
19 20 4.536526 TGCAAGGCCAGCACCCAA 62.537 61.111 17.76 0.00 37.02 4.12
20 21 3.688159 GCAAGGCCAGCACCCAAG 61.688 66.667 14.58 0.00 0.00 3.61
21 22 2.115910 CAAGGCCAGCACCCAAGA 59.884 61.111 5.01 0.00 0.00 3.02
22 23 1.531365 CAAGGCCAGCACCCAAGAA 60.531 57.895 5.01 0.00 0.00 2.52
23 24 1.531602 AAGGCCAGCACCCAAGAAC 60.532 57.895 5.01 0.00 0.00 3.01
24 25 3.365265 GGCCAGCACCCAAGAACG 61.365 66.667 0.00 0.00 0.00 3.95
25 26 3.365265 GCCAGCACCCAAGAACGG 61.365 66.667 0.00 0.00 0.00 4.44
26 27 2.113139 CCAGCACCCAAGAACGGT 59.887 61.111 0.00 0.00 0.00 4.83
42 43 3.655481 GTGACCGAAGCCACCAAG 58.345 61.111 0.00 0.00 0.00 3.61
43 44 1.966451 GTGACCGAAGCCACCAAGG 60.966 63.158 0.00 0.00 41.84 3.61
44 45 2.359975 GACCGAAGCCACCAAGGG 60.360 66.667 0.00 0.00 38.09 3.95
52 53 4.506255 CCACCAAGGGCCGGATCC 62.506 72.222 5.05 5.77 0.00 3.36
53 54 4.856801 CACCAAGGGCCGGATCCG 62.857 72.222 27.65 27.65 39.44 4.18
69 70 2.050895 CGCGGCAGATCGGAGTAG 60.051 66.667 0.00 0.00 0.00 2.57
70 71 2.543802 CGCGGCAGATCGGAGTAGA 61.544 63.158 0.00 0.00 0.00 2.59
71 72 1.857318 CGCGGCAGATCGGAGTAGAT 61.857 60.000 0.00 0.00 0.00 1.98
72 73 0.109504 GCGGCAGATCGGAGTAGATC 60.110 60.000 0.00 0.00 45.45 2.75
77 78 3.342982 GATCGGAGTAGATCGGGGT 57.657 57.895 0.00 0.00 37.82 4.95
78 79 1.166989 GATCGGAGTAGATCGGGGTC 58.833 60.000 0.00 0.00 37.82 4.46
79 80 0.605860 ATCGGAGTAGATCGGGGTCG 60.606 60.000 0.00 0.00 37.82 4.79
95 96 2.648593 TCGAGGACGAACATCACCA 58.351 52.632 0.00 0.00 45.74 4.17
96 97 1.182667 TCGAGGACGAACATCACCAT 58.817 50.000 0.00 0.00 45.74 3.55
97 98 1.135112 TCGAGGACGAACATCACCATG 60.135 52.381 0.00 0.00 45.74 3.66
98 99 1.656652 GAGGACGAACATCACCATGG 58.343 55.000 11.19 11.19 33.82 3.66
99 100 0.392998 AGGACGAACATCACCATGGC 60.393 55.000 13.04 0.00 33.82 4.40
100 101 1.376609 GGACGAACATCACCATGGCC 61.377 60.000 13.04 0.00 33.82 5.36
101 102 0.676466 GACGAACATCACCATGGCCA 60.676 55.000 13.04 8.56 33.82 5.36
102 103 0.960364 ACGAACATCACCATGGCCAC 60.960 55.000 8.16 0.00 33.82 5.01
103 104 1.656818 CGAACATCACCATGGCCACC 61.657 60.000 8.16 0.00 33.82 4.61
104 105 0.611618 GAACATCACCATGGCCACCA 60.612 55.000 8.16 0.00 38.19 4.17
105 106 0.041535 AACATCACCATGGCCACCAT 59.958 50.000 8.16 0.00 46.37 3.55
106 107 0.396139 ACATCACCATGGCCACCATC 60.396 55.000 8.16 0.00 43.15 3.51
107 108 0.396001 CATCACCATGGCCACCATCA 60.396 55.000 8.16 0.00 43.15 3.07
108 109 0.559205 ATCACCATGGCCACCATCAT 59.441 50.000 8.16 0.00 43.15 2.45
109 110 0.106569 TCACCATGGCCACCATCATC 60.107 55.000 8.16 0.00 43.15 2.92
110 111 1.152902 ACCATGGCCACCATCATCG 60.153 57.895 8.16 0.00 43.15 3.84
111 112 1.148949 CCATGGCCACCATCATCGA 59.851 57.895 8.16 0.00 43.15 3.59
112 113 0.887836 CCATGGCCACCATCATCGAG 60.888 60.000 8.16 0.00 43.15 4.04
113 114 1.228063 ATGGCCACCATCATCGAGC 60.228 57.895 8.16 0.00 40.74 5.03
114 115 2.969238 GGCCACCATCATCGAGCG 60.969 66.667 0.00 0.00 0.00 5.03
115 116 2.106938 GCCACCATCATCGAGCGA 59.893 61.111 0.00 0.00 0.00 4.93
116 117 1.953138 GCCACCATCATCGAGCGAG 60.953 63.158 0.00 0.00 0.00 5.03
117 118 1.300465 CCACCATCATCGAGCGAGG 60.300 63.158 0.00 0.00 0.00 4.63
118 119 1.735973 CACCATCATCGAGCGAGGA 59.264 57.895 9.71 9.71 39.31 3.71
119 120 0.103026 CACCATCATCGAGCGAGGAA 59.897 55.000 11.30 0.00 38.45 3.36
120 121 0.103208 ACCATCATCGAGCGAGGAAC 59.897 55.000 11.30 0.00 38.45 3.62
121 122 0.598680 CCATCATCGAGCGAGGAACC 60.599 60.000 11.30 0.00 38.45 3.62
122 123 0.936764 CATCATCGAGCGAGGAACCG 60.937 60.000 11.30 0.21 38.45 4.44
149 150 4.410400 CCGAAGCCCACCACCTCC 62.410 72.222 0.00 0.00 0.00 4.30
150 151 4.410400 CGAAGCCCACCACCTCCC 62.410 72.222 0.00 0.00 0.00 4.30
151 152 4.048470 GAAGCCCACCACCTCCCC 62.048 72.222 0.00 0.00 0.00 4.81
157 158 4.489771 CACCACCTCCCCGCCATC 62.490 72.222 0.00 0.00 0.00 3.51
160 161 4.489771 CACCTCCCCGCCATCCAC 62.490 72.222 0.00 0.00 0.00 4.02
162 163 3.492353 CCTCCCCGCCATCCACAT 61.492 66.667 0.00 0.00 0.00 3.21
163 164 2.203252 CTCCCCGCCATCCACATG 60.203 66.667 0.00 0.00 0.00 3.21
170 171 2.123597 CCATCCACATGGCCAGGG 60.124 66.667 23.35 17.81 43.55 4.45
171 172 2.692824 CCATCCACATGGCCAGGGA 61.693 63.158 23.35 22.44 43.55 4.20
172 173 1.307309 CATCCACATGGCCAGGGAA 59.693 57.895 23.35 6.72 32.25 3.97
173 174 0.754217 CATCCACATGGCCAGGGAAG 60.754 60.000 23.35 15.91 32.25 3.46
174 175 1.217057 ATCCACATGGCCAGGGAAGT 61.217 55.000 23.35 6.75 32.25 3.01
175 176 1.679977 CCACATGGCCAGGGAAGTG 60.680 63.158 23.35 17.97 0.00 3.16
176 177 1.679977 CACATGGCCAGGGAAGTGG 60.680 63.158 23.35 0.00 41.01 4.00
186 187 2.034221 GGAAGTGGCCCACCTGTC 59.966 66.667 11.06 5.76 34.49 3.51
187 188 2.034221 GAAGTGGCCCACCTGTCC 59.966 66.667 11.06 0.00 34.49 4.02
188 189 2.776526 AAGTGGCCCACCTGTCCA 60.777 61.111 11.06 0.00 34.49 4.02
254 255 3.860605 CCACCGCCATGGATCCGA 61.861 66.667 18.40 0.00 43.02 4.55
255 256 2.280389 CACCGCCATGGATCCGAG 60.280 66.667 18.40 6.56 42.00 4.63
256 257 4.241555 ACCGCCATGGATCCGAGC 62.242 66.667 18.40 8.79 42.00 5.03
257 258 4.996434 CCGCCATGGATCCGAGCC 62.996 72.222 18.40 0.00 42.00 4.70
260 261 4.240103 CCATGGATCCGAGCCGCA 62.240 66.667 5.56 0.00 0.00 5.69
261 262 2.664185 CATGGATCCGAGCCGCAG 60.664 66.667 7.39 0.00 0.00 5.18
385 386 4.664677 CGGCGGCGAGGGGATTAG 62.665 72.222 29.19 0.00 0.00 1.73
386 387 4.990553 GGCGGCGAGGGGATTAGC 62.991 72.222 12.98 0.00 0.00 3.09
387 388 3.930012 GCGGCGAGGGGATTAGCT 61.930 66.667 12.98 0.00 0.00 3.32
388 389 2.029666 CGGCGAGGGGATTAGCTG 59.970 66.667 0.00 0.00 0.00 4.24
389 390 2.427753 GGCGAGGGGATTAGCTGG 59.572 66.667 0.00 0.00 0.00 4.85
390 391 2.140792 GGCGAGGGGATTAGCTGGA 61.141 63.158 0.00 0.00 0.00 3.86
391 392 1.369321 GCGAGGGGATTAGCTGGAG 59.631 63.158 0.00 0.00 0.00 3.86
392 393 1.115930 GCGAGGGGATTAGCTGGAGA 61.116 60.000 0.00 0.00 0.00 3.71
393 394 1.414158 CGAGGGGATTAGCTGGAGAA 58.586 55.000 0.00 0.00 0.00 2.87
394 395 1.342819 CGAGGGGATTAGCTGGAGAAG 59.657 57.143 0.00 0.00 0.00 2.85
395 396 1.696884 GAGGGGATTAGCTGGAGAAGG 59.303 57.143 0.00 0.00 0.00 3.46
396 397 0.767998 GGGGATTAGCTGGAGAAGGG 59.232 60.000 0.00 0.00 0.00 3.95
397 398 0.767998 GGGATTAGCTGGAGAAGGGG 59.232 60.000 0.00 0.00 0.00 4.79
398 399 0.767998 GGATTAGCTGGAGAAGGGGG 59.232 60.000 0.00 0.00 0.00 5.40
446 447 2.440796 CCCGTGTCGCCTACCCTA 60.441 66.667 0.00 0.00 0.00 3.53
447 448 2.487532 CCCGTGTCGCCTACCCTAG 61.488 68.421 0.00 0.00 0.00 3.02
455 456 3.117372 CCTACCCTAGGCGACACG 58.883 66.667 2.05 0.00 39.48 4.49
456 457 2.487532 CCTACCCTAGGCGACACGG 61.488 68.421 2.05 0.00 39.48 4.94
457 458 2.440796 TACCCTAGGCGACACGGG 60.441 66.667 12.96 12.96 44.92 5.28
467 468 3.961414 GACACGGGGGCCTTCCAA 61.961 66.667 0.84 0.00 37.22 3.53
468 469 3.264845 ACACGGGGGCCTTCCAAT 61.265 61.111 0.84 0.00 37.22 3.16
469 470 2.755469 CACGGGGGCCTTCCAATG 60.755 66.667 0.84 2.78 37.22 2.82
470 471 2.938798 ACGGGGGCCTTCCAATGA 60.939 61.111 0.84 0.00 37.22 2.57
471 472 2.316586 ACGGGGGCCTTCCAATGAT 61.317 57.895 0.84 0.00 37.22 2.45
521 522 4.710423 TCTTTTGCAAGCAGTACAAACA 57.290 36.364 0.00 0.00 33.29 2.83
549 585 1.048601 CACAGACACACACCCTACCT 58.951 55.000 0.00 0.00 0.00 3.08
564 600 1.883275 CTACCTCTATGAGCACCTCCG 59.117 57.143 0.00 0.00 0.00 4.63
566 602 1.133325 ACCTCTATGAGCACCTCCGAT 60.133 52.381 0.00 0.00 0.00 4.18
581 617 1.589993 CGATACACTGAGCCGGCAG 60.590 63.158 31.54 21.13 41.63 4.85
585 621 1.468506 TACACTGAGCCGGCAGAACA 61.469 55.000 31.54 20.53 39.20 3.18
623 662 5.815233 AGTCACCATGGACTCCATAATAG 57.185 43.478 21.47 3.16 44.63 1.73
637 676 7.787028 ACTCCATAATAGACTGAAACTTCTCC 58.213 38.462 0.00 0.00 0.00 3.71
658 697 7.652727 TCTCCTCTCACTGAATGAATATAACG 58.347 38.462 0.00 0.00 36.69 3.18
689 728 3.222603 AGAACATGAACCTTGGTTGACC 58.777 45.455 10.04 0.00 0.00 4.02
691 730 1.142060 ACATGAACCTTGGTTGACCGA 59.858 47.619 10.04 0.00 39.43 4.69
699 738 2.436417 CTTGGTTGACCGATTCCACAT 58.564 47.619 0.00 0.00 39.43 3.21
700 739 3.605634 CTTGGTTGACCGATTCCACATA 58.394 45.455 0.00 0.00 39.43 2.29
709 748 5.365605 TGACCGATTCCACATAAGAACCTAT 59.634 40.000 0.00 0.00 0.00 2.57
720 759 6.016777 CACATAAGAACCTATCCATTTGAGCC 60.017 42.308 0.00 0.00 0.00 4.70
723 762 2.332063 ACCTATCCATTTGAGCCACG 57.668 50.000 0.00 0.00 0.00 4.94
734 773 2.821685 AGCCACGCTCAGTTCACA 59.178 55.556 0.00 0.00 30.62 3.58
735 774 1.372683 AGCCACGCTCAGTTCACAT 59.627 52.632 0.00 0.00 30.62 3.21
746 785 6.803320 ACGCTCAGTTCACATTTGATATTTTG 59.197 34.615 0.00 0.00 0.00 2.44
749 788 7.201410 GCTCAGTTCACATTTGATATTTTGCAG 60.201 37.037 0.00 0.00 0.00 4.41
793 832 7.679659 TCTTACATAATCAAATGTCTCGTCG 57.320 36.000 0.00 0.00 40.52 5.12
798 837 8.642908 ACATAATCAAATGTCTCGTCGAAATA 57.357 30.769 0.00 0.00 35.08 1.40
820 859 3.565905 AGTGCAAGTAATTTCTGCAGC 57.434 42.857 9.47 0.00 36.10 5.25
905 944 1.216710 CTCTTCAGCCCGAGGTCAC 59.783 63.158 0.00 0.00 0.00 3.67
928 967 2.434884 CCGGTCTCGTGCATTGCT 60.435 61.111 10.49 0.00 33.95 3.91
1072 1116 2.567049 GCGTAGTCGTCCTGCTGT 59.433 61.111 0.00 0.00 39.49 4.40
1083 1127 4.406173 CTGCTGTCGACGCCGTCT 62.406 66.667 23.01 0.00 37.05 4.18
1261 1305 2.601504 CCGGACATCATCAGTACGTACG 60.602 54.545 19.49 15.01 41.63 3.67
1262 1306 2.382519 GGACATCATCAGTACGTACGC 58.617 52.381 19.49 0.00 0.00 4.42
1263 1307 2.034789 GACATCATCAGTACGTACGCG 58.965 52.381 19.49 14.77 44.93 6.01
1264 1308 1.667212 ACATCATCAGTACGTACGCGA 59.333 47.619 15.93 19.19 42.00 5.87
1265 1309 2.034789 CATCATCAGTACGTACGCGAC 58.965 52.381 15.93 13.88 42.00 5.19
1266 1310 1.077915 TCATCAGTACGTACGCGACA 58.922 50.000 15.93 8.39 42.00 4.35
1273 1317 2.778551 TACGTACGCGACAACCACCG 62.779 60.000 15.93 5.06 42.00 4.94
1281 1325 1.626654 CGACAACCACCGCTAGCAAG 61.627 60.000 16.45 7.92 0.00 4.01
1290 1340 0.815213 CCGCTAGCAAGCTGCCATTA 60.815 55.000 16.45 0.00 46.52 1.90
1300 1350 4.791974 CAAGCTGCCATTAATTAGCTAGC 58.208 43.478 6.62 6.62 45.09 3.42
1307 1357 3.189080 CCATTAATTAGCTAGCGCATGCA 59.811 43.478 19.57 7.17 46.23 3.96
1308 1358 4.142534 CCATTAATTAGCTAGCGCATGCAT 60.143 41.667 19.57 8.14 46.23 3.96
1329 1379 3.795561 GCGCTCGCAATTAATGTAGAT 57.204 42.857 9.59 0.00 41.49 1.98
1330 1380 3.473367 GCGCTCGCAATTAATGTAGATG 58.527 45.455 9.59 0.00 41.49 2.90
1331 1381 3.059597 GCGCTCGCAATTAATGTAGATGT 60.060 43.478 9.59 0.00 41.49 3.06
1332 1382 4.692135 CGCTCGCAATTAATGTAGATGTC 58.308 43.478 0.00 0.00 0.00 3.06
1333 1383 4.376413 CGCTCGCAATTAATGTAGATGTCC 60.376 45.833 0.00 0.00 0.00 4.02
1334 1384 4.511454 GCTCGCAATTAATGTAGATGTCCA 59.489 41.667 0.00 0.00 0.00 4.02
1335 1385 5.180117 GCTCGCAATTAATGTAGATGTCCAT 59.820 40.000 0.00 0.00 0.00 3.41
1336 1386 6.619446 GCTCGCAATTAATGTAGATGTCCATC 60.619 42.308 0.00 0.00 38.09 3.51
1337 1387 5.405269 TCGCAATTAATGTAGATGTCCATCG 59.595 40.000 1.82 0.00 42.48 3.84
1338 1388 5.389830 CGCAATTAATGTAGATGTCCATCGG 60.390 44.000 1.82 0.00 42.48 4.18
1364 1434 0.034089 TCTCAGGTGAGCATCTCGGA 60.034 55.000 1.81 0.00 41.80 4.55
1367 1437 1.381056 AGGTGAGCATCTCGGAGCT 60.381 57.895 0.00 0.00 45.25 4.09
1403 1473 2.390225 ACTTATCTCCGGAGCTCCAT 57.610 50.000 31.67 19.54 35.14 3.41
1475 1545 2.047274 AACGACACGGGCATCCAG 60.047 61.111 0.00 0.00 0.00 3.86
1492 1575 2.037902 TCCAGTTTGTACGCATCTCCAA 59.962 45.455 0.00 0.00 0.00 3.53
1503 1598 3.624861 ACGCATCTCCAACTTGATCAATC 59.375 43.478 8.96 0.00 0.00 2.67
1504 1599 3.003068 CGCATCTCCAACTTGATCAATCC 59.997 47.826 8.96 0.00 0.00 3.01
1505 1600 3.317430 GCATCTCCAACTTGATCAATCCC 59.683 47.826 8.96 0.00 0.00 3.85
1508 1603 2.679837 CTCCAACTTGATCAATCCCACG 59.320 50.000 8.96 0.00 0.00 4.94
1512 1607 1.278985 ACTTGATCAATCCCACGAGCA 59.721 47.619 8.96 0.00 0.00 4.26
1513 1608 1.938577 CTTGATCAATCCCACGAGCAG 59.061 52.381 8.96 0.00 0.00 4.24
1518 1618 0.392193 CAATCCCACGAGCAGCTTCT 60.392 55.000 0.00 0.00 0.00 2.85
1519 1619 0.107945 AATCCCACGAGCAGCTTCTC 60.108 55.000 2.94 2.94 0.00 2.87
1520 1620 0.975040 ATCCCACGAGCAGCTTCTCT 60.975 55.000 11.68 0.00 0.00 3.10
1521 1621 1.153667 CCCACGAGCAGCTTCTCTC 60.154 63.158 11.68 4.77 0.00 3.20
1524 1624 4.375723 CGAGCAGCTTCTCTCGTC 57.624 61.111 11.68 0.00 44.95 4.20
1525 1625 1.582424 CGAGCAGCTTCTCTCGTCG 60.582 63.158 11.68 0.00 44.95 5.12
1527 1627 1.649390 GAGCAGCTTCTCTCGTCGGA 61.649 60.000 6.09 0.00 0.00 4.55
1528 1628 1.226547 GCAGCTTCTCTCGTCGGAG 60.227 63.158 4.82 4.82 41.89 4.63
1529 1629 1.649390 GCAGCTTCTCTCGTCGGAGA 61.649 60.000 8.73 8.73 46.90 3.71
1545 1682 5.163784 CGTCGGAGAGTACTCAATTAACTCA 60.164 44.000 24.44 0.00 44.22 3.41
1547 1684 6.693545 GTCGGAGAGTACTCAATTAACTCATG 59.306 42.308 24.44 8.05 44.22 3.07
1551 1688 8.035394 GGAGAGTACTCAATTAACTCATGAACA 58.965 37.037 24.44 0.00 44.22 3.18
1775 1927 2.044650 CCTCCCCGACTACGTCCA 60.045 66.667 0.00 0.00 37.88 4.02
1831 1985 6.422344 TGGTAACAGTCCTTGTATACACAA 57.578 37.500 4.68 0.00 46.17 3.33
1832 1986 7.011499 TGGTAACAGTCCTTGTATACACAAT 57.989 36.000 4.68 0.00 46.17 2.71
1833 1987 8.136563 TGGTAACAGTCCTTGTATACACAATA 57.863 34.615 4.68 0.00 46.17 1.90
1834 1988 8.595421 TGGTAACAGTCCTTGTATACACAATAA 58.405 33.333 4.68 0.00 46.17 1.40
1837 1991 8.420374 AACAGTCCTTGTATACACAATAATCG 57.580 34.615 4.68 0.00 43.58 3.34
1838 1992 7.778083 ACAGTCCTTGTATACACAATAATCGA 58.222 34.615 4.68 0.00 43.58 3.59
1839 1993 8.255206 ACAGTCCTTGTATACACAATAATCGAA 58.745 33.333 4.68 0.00 43.58 3.71
1840 1994 9.261180 CAGTCCTTGTATACACAATAATCGAAT 57.739 33.333 4.68 0.00 43.58 3.34
1846 2000 8.908678 TTGTATACACAATAATCGAATAGTCGC 58.091 33.333 7.88 0.00 42.17 5.19
1858 2012 5.654317 CGAATAGTCGCAGTCTACTAAGA 57.346 43.478 0.00 0.00 41.08 2.10
1882 2219 9.624373 AGACTTCATTATGTATCAGAAAATGCT 57.376 29.630 0.00 0.00 0.00 3.79
1893 2230 8.764287 TGTATCAGAAAATGCTATATTCGTGTG 58.236 33.333 0.00 0.00 0.00 3.82
1894 2231 8.978539 GTATCAGAAAATGCTATATTCGTGTGA 58.021 33.333 0.00 0.00 0.00 3.58
1895 2232 8.613060 ATCAGAAAATGCTATATTCGTGTGAT 57.387 30.769 0.00 0.00 0.00 3.06
1896 2233 8.076714 TCAGAAAATGCTATATTCGTGTGATC 57.923 34.615 0.00 0.00 0.00 2.92
1898 2235 8.554528 CAGAAAATGCTATATTCGTGTGATCTT 58.445 33.333 0.00 0.00 0.00 2.40
1914 2251 9.546909 CGTGTGATCTTATATTAAAATCCATGC 57.453 33.333 0.00 0.00 0.00 4.06
1982 2648 5.699097 ATCTCATTCGACTAAGACCTAGC 57.301 43.478 0.00 0.00 0.00 3.42
1983 2649 3.884091 TCTCATTCGACTAAGACCTAGCC 59.116 47.826 0.00 0.00 0.00 3.93
1984 2650 3.628008 TCATTCGACTAAGACCTAGCCA 58.372 45.455 0.00 0.00 0.00 4.75
1985 2651 3.380637 TCATTCGACTAAGACCTAGCCAC 59.619 47.826 0.00 0.00 0.00 5.01
1986 2652 2.502142 TCGACTAAGACCTAGCCACA 57.498 50.000 0.00 0.00 0.00 4.17
1988 2654 1.134560 CGACTAAGACCTAGCCACACC 59.865 57.143 0.00 0.00 0.00 4.16
1989 2655 1.481363 GACTAAGACCTAGCCACACCC 59.519 57.143 0.00 0.00 0.00 4.61
1990 2656 0.831307 CTAAGACCTAGCCACACCCC 59.169 60.000 0.00 0.00 0.00 4.95
1993 2659 0.416231 AGACCTAGCCACACCCCTAA 59.584 55.000 0.00 0.00 0.00 2.69
1995 2661 1.209747 GACCTAGCCACACCCCTAAAG 59.790 57.143 0.00 0.00 0.00 1.85
1996 2662 0.107165 CCTAGCCACACCCCTAAAGC 60.107 60.000 0.00 0.00 0.00 3.51
2007 2677 2.709397 ACCCCTAAAGCTTATATGCGGT 59.291 45.455 0.00 0.00 38.13 5.68
2016 2686 5.169836 AGCTTATATGCGGTGTAAAAAGC 57.830 39.130 5.07 0.00 38.64 3.51
2052 2763 2.256117 ACAAGGTAGACAAGCACCAC 57.744 50.000 0.00 0.00 37.28 4.16
2057 2768 3.182152 AGGTAGACAAGCACCACCTAAT 58.818 45.455 0.00 0.00 37.85 1.73
2067 2778 6.183360 ACAAGCACCACCTAATACGTACATAT 60.183 38.462 0.00 0.00 0.00 1.78
2090 2804 3.475566 TGGAATGTATGCAGAGGCTAC 57.524 47.619 0.00 0.00 41.91 3.58
2228 2945 1.597854 CTGTTCAACCCGCAGCTGA 60.598 57.895 20.43 0.00 0.00 4.26
2254 2971 2.659016 CTGGAGGAGCTCAACGCA 59.341 61.111 17.19 7.92 42.61 5.24
2350 3067 4.815108 GGGTTCCGGATGGCCACC 62.815 72.222 8.16 13.04 37.51 4.61
2423 3140 3.041940 CCAACGTCTGCACCGACC 61.042 66.667 7.94 0.00 0.00 4.79
2565 3282 0.108186 CACATAGACGCCAGCCTCAA 60.108 55.000 0.00 0.00 0.00 3.02
2577 3294 3.262915 GCCAGCCTCAAGGACTGATATAT 59.737 47.826 16.98 0.00 39.83 0.86
2578 3295 4.467795 GCCAGCCTCAAGGACTGATATATA 59.532 45.833 16.98 0.00 39.83 0.86
2579 3296 5.130145 GCCAGCCTCAAGGACTGATATATAT 59.870 44.000 16.98 0.00 39.83 0.86
2580 3297 6.580788 CCAGCCTCAAGGACTGATATATATG 58.419 44.000 16.98 0.00 39.83 1.78
2581 3298 6.155910 CCAGCCTCAAGGACTGATATATATGT 59.844 42.308 16.98 0.00 39.83 2.29
2582 3299 7.264221 CAGCCTCAAGGACTGATATATATGTC 58.736 42.308 12.42 2.65 39.83 3.06
2583 3300 6.382570 AGCCTCAAGGACTGATATATATGTCC 59.617 42.308 20.59 20.59 46.67 4.02
2589 3306 6.627395 GGACTGATATATATGTCCCGAGAG 57.373 45.833 18.74 0.72 42.11 3.20
2590 3307 6.123651 GGACTGATATATATGTCCCGAGAGT 58.876 44.000 18.74 3.63 42.11 3.24
2591 3308 6.261381 GGACTGATATATATGTCCCGAGAGTC 59.739 46.154 18.74 13.87 42.11 3.36
2592 3309 6.123651 ACTGATATATATGTCCCGAGAGTCC 58.876 44.000 0.00 0.00 0.00 3.85
2593 3310 6.074698 TGATATATATGTCCCGAGAGTCCA 57.925 41.667 0.00 0.00 0.00 4.02
2594 3311 6.673583 TGATATATATGTCCCGAGAGTCCAT 58.326 40.000 0.00 0.00 0.00 3.41
2595 3312 6.547510 TGATATATATGTCCCGAGAGTCCATG 59.452 42.308 0.00 0.00 0.00 3.66
2596 3313 2.748209 TATGTCCCGAGAGTCCATGA 57.252 50.000 0.00 0.00 0.00 3.07
2597 3314 1.115467 ATGTCCCGAGAGTCCATGAC 58.885 55.000 0.00 0.00 0.00 3.06
2598 3315 1.313091 TGTCCCGAGAGTCCATGACG 61.313 60.000 0.00 0.00 37.67 4.35
2599 3316 2.105128 CCCGAGAGTCCATGACGC 59.895 66.667 0.00 0.00 37.67 5.19
2600 3317 2.418910 CCCGAGAGTCCATGACGCT 61.419 63.158 0.00 0.00 44.70 5.07
2601 3318 1.513158 CCGAGAGTCCATGACGCTT 59.487 57.895 0.00 0.00 42.31 4.68
2602 3319 0.803768 CCGAGAGTCCATGACGCTTG 60.804 60.000 7.90 7.90 42.31 4.01
2603 3320 0.803768 CGAGAGTCCATGACGCTTGG 60.804 60.000 7.18 5.71 42.31 3.61
2604 3321 0.460987 GAGAGTCCATGACGCTTGGG 60.461 60.000 0.00 0.00 42.31 4.12
2605 3322 2.045926 AGTCCATGACGCTTGGGC 60.046 61.111 0.00 7.85 39.22 5.36
2606 3323 3.134127 GTCCATGACGCTTGGGCC 61.134 66.667 0.00 0.00 32.52 5.80
2607 3324 3.645660 TCCATGACGCTTGGGCCA 61.646 61.111 0.00 0.00 34.85 5.36
2608 3325 3.443045 CCATGACGCTTGGGCCAC 61.443 66.667 5.23 0.00 34.44 5.01
2609 3326 3.803082 CATGACGCTTGGGCCACG 61.803 66.667 5.23 10.93 34.44 4.94
2610 3327 4.015406 ATGACGCTTGGGCCACGA 62.015 61.111 21.64 0.10 34.44 4.35
2611 3328 3.545124 ATGACGCTTGGGCCACGAA 62.545 57.895 21.64 10.52 34.44 3.85
2612 3329 3.723348 GACGCTTGGGCCACGAAC 61.723 66.667 21.64 11.72 34.44 3.95
2631 3348 4.745751 CGTGCGGGGCCTTTCGTA 62.746 66.667 0.84 1.13 0.00 3.43
2632 3349 2.124860 GTGCGGGGCCTTTCGTAT 60.125 61.111 0.84 0.00 0.00 3.06
2633 3350 2.124901 TGCGGGGCCTTTCGTATG 60.125 61.111 0.84 0.00 0.00 2.39
2634 3351 2.124860 GCGGGGCCTTTCGTATGT 60.125 61.111 0.84 0.00 0.00 2.29
2635 3352 2.178235 GCGGGGCCTTTCGTATGTC 61.178 63.158 0.84 0.00 0.00 3.06
2636 3353 1.523032 CGGGGCCTTTCGTATGTCC 60.523 63.158 0.84 0.00 0.00 4.02
2637 3354 1.912971 GGGGCCTTTCGTATGTCCT 59.087 57.895 0.84 0.00 0.00 3.85
2638 3355 0.179054 GGGGCCTTTCGTATGTCCTC 60.179 60.000 0.84 0.00 0.00 3.71
2639 3356 0.831307 GGGCCTTTCGTATGTCCTCT 59.169 55.000 0.84 0.00 0.00 3.69
2640 3357 1.209747 GGGCCTTTCGTATGTCCTCTT 59.790 52.381 0.84 0.00 0.00 2.85
2641 3358 2.355818 GGGCCTTTCGTATGTCCTCTTT 60.356 50.000 0.84 0.00 0.00 2.52
2642 3359 3.344515 GGCCTTTCGTATGTCCTCTTTT 58.655 45.455 0.00 0.00 0.00 2.27
2643 3360 3.127030 GGCCTTTCGTATGTCCTCTTTTG 59.873 47.826 0.00 0.00 0.00 2.44
2644 3361 3.426292 GCCTTTCGTATGTCCTCTTTTGC 60.426 47.826 0.00 0.00 0.00 3.68
2645 3362 3.181520 CCTTTCGTATGTCCTCTTTTGCG 60.182 47.826 0.00 0.00 0.00 4.85
2646 3363 2.736144 TCGTATGTCCTCTTTTGCGT 57.264 45.000 0.00 0.00 0.00 5.24
2647 3364 3.034721 TCGTATGTCCTCTTTTGCGTT 57.965 42.857 0.00 0.00 0.00 4.84
2648 3365 2.734606 TCGTATGTCCTCTTTTGCGTTG 59.265 45.455 0.00 0.00 0.00 4.10
2649 3366 2.734606 CGTATGTCCTCTTTTGCGTTGA 59.265 45.455 0.00 0.00 0.00 3.18
2650 3367 3.370978 CGTATGTCCTCTTTTGCGTTGAT 59.629 43.478 0.00 0.00 0.00 2.57
2651 3368 4.565166 CGTATGTCCTCTTTTGCGTTGATA 59.435 41.667 0.00 0.00 0.00 2.15
2652 3369 5.234329 CGTATGTCCTCTTTTGCGTTGATAT 59.766 40.000 0.00 0.00 0.00 1.63
2653 3370 6.238103 CGTATGTCCTCTTTTGCGTTGATATT 60.238 38.462 0.00 0.00 0.00 1.28
2654 3371 5.957842 TGTCCTCTTTTGCGTTGATATTT 57.042 34.783 0.00 0.00 0.00 1.40
2655 3372 6.325919 TGTCCTCTTTTGCGTTGATATTTT 57.674 33.333 0.00 0.00 0.00 1.82
2656 3373 6.148948 TGTCCTCTTTTGCGTTGATATTTTG 58.851 36.000 0.00 0.00 0.00 2.44
2657 3374 6.149633 GTCCTCTTTTGCGTTGATATTTTGT 58.850 36.000 0.00 0.00 0.00 2.83
2658 3375 6.088085 GTCCTCTTTTGCGTTGATATTTTGTG 59.912 38.462 0.00 0.00 0.00 3.33
2659 3376 5.920273 CCTCTTTTGCGTTGATATTTTGTGT 59.080 36.000 0.00 0.00 0.00 3.72
2660 3377 6.129115 CCTCTTTTGCGTTGATATTTTGTGTG 60.129 38.462 0.00 0.00 0.00 3.82
2661 3378 5.689514 TCTTTTGCGTTGATATTTTGTGTGG 59.310 36.000 0.00 0.00 0.00 4.17
2662 3379 2.940147 TGCGTTGATATTTTGTGTGGC 58.060 42.857 0.00 0.00 0.00 5.01
2663 3380 1.910819 GCGTTGATATTTTGTGTGGCG 59.089 47.619 0.00 0.00 0.00 5.69
2664 3381 2.413502 GCGTTGATATTTTGTGTGGCGA 60.414 45.455 0.00 0.00 0.00 5.54
2665 3382 3.730662 GCGTTGATATTTTGTGTGGCGAT 60.731 43.478 0.00 0.00 0.00 4.58
2666 3383 3.785521 CGTTGATATTTTGTGTGGCGATG 59.214 43.478 0.00 0.00 0.00 3.84
2667 3384 3.419264 TGATATTTTGTGTGGCGATGC 57.581 42.857 0.00 0.00 0.00 3.91
2668 3385 2.223226 TGATATTTTGTGTGGCGATGCG 60.223 45.455 0.00 0.00 0.00 4.73
2669 3386 0.449786 TATTTTGTGTGGCGATGCGG 59.550 50.000 0.00 0.00 0.00 5.69
2670 3387 1.523154 ATTTTGTGTGGCGATGCGGT 61.523 50.000 0.00 0.00 0.00 5.68
2671 3388 1.729470 TTTTGTGTGGCGATGCGGTT 61.729 50.000 0.00 0.00 0.00 4.44
2672 3389 2.399511 TTTGTGTGGCGATGCGGTTG 62.400 55.000 0.00 0.00 0.00 3.77
2673 3390 3.353836 GTGTGGCGATGCGGTTGT 61.354 61.111 0.00 0.00 0.00 3.32
2674 3391 2.593148 TGTGGCGATGCGGTTGTT 60.593 55.556 0.00 0.00 0.00 2.83
2675 3392 1.301795 TGTGGCGATGCGGTTGTTA 60.302 52.632 0.00 0.00 0.00 2.41
2676 3393 0.675208 TGTGGCGATGCGGTTGTTAT 60.675 50.000 0.00 0.00 0.00 1.89
2677 3394 0.027586 GTGGCGATGCGGTTGTTATC 59.972 55.000 0.00 0.00 0.00 1.75
2678 3395 0.107897 TGGCGATGCGGTTGTTATCT 60.108 50.000 0.00 0.00 0.00 1.98
2679 3396 0.304705 GGCGATGCGGTTGTTATCTG 59.695 55.000 0.00 0.00 0.00 2.90
2680 3397 1.006832 GCGATGCGGTTGTTATCTGT 58.993 50.000 0.00 0.00 0.00 3.41
2681 3398 1.004927 GCGATGCGGTTGTTATCTGTC 60.005 52.381 0.00 0.00 0.00 3.51
2682 3399 2.267426 CGATGCGGTTGTTATCTGTCA 58.733 47.619 0.00 0.00 0.00 3.58
2683 3400 2.866156 CGATGCGGTTGTTATCTGTCAT 59.134 45.455 0.00 0.00 0.00 3.06
2684 3401 3.309682 CGATGCGGTTGTTATCTGTCATT 59.690 43.478 0.00 0.00 0.00 2.57
2685 3402 4.201812 CGATGCGGTTGTTATCTGTCATTT 60.202 41.667 0.00 0.00 0.00 2.32
2686 3403 5.006261 CGATGCGGTTGTTATCTGTCATTTA 59.994 40.000 0.00 0.00 0.00 1.40
2687 3404 6.456315 CGATGCGGTTGTTATCTGTCATTTAA 60.456 38.462 0.00 0.00 0.00 1.52
2688 3405 6.751514 TGCGGTTGTTATCTGTCATTTAAT 57.248 33.333 0.00 0.00 0.00 1.40
2689 3406 7.151999 TGCGGTTGTTATCTGTCATTTAATT 57.848 32.000 0.00 0.00 0.00 1.40
2690 3407 7.598278 TGCGGTTGTTATCTGTCATTTAATTT 58.402 30.769 0.00 0.00 0.00 1.82
2691 3408 8.731605 TGCGGTTGTTATCTGTCATTTAATTTA 58.268 29.630 0.00 0.00 0.00 1.40
2692 3409 9.562583 GCGGTTGTTATCTGTCATTTAATTTAA 57.437 29.630 0.00 0.00 0.00 1.52
2741 3458 9.507329 ACTTGTAGTGACTAATTGATGATTTGT 57.493 29.630 0.00 0.00 36.59 2.83
2747 3464 9.903682 AGTGACTAATTGATGATTTGTTTTCAG 57.096 29.630 0.00 0.00 34.53 3.02
2748 3465 9.683069 GTGACTAATTGATGATTTGTTTTCAGT 57.317 29.630 0.00 0.00 34.53 3.41
2752 3469 9.277565 CTAATTGATGATTTGTTTTCAGTACCG 57.722 33.333 0.00 0.00 0.00 4.02
2753 3470 5.621197 TGATGATTTGTTTTCAGTACCGG 57.379 39.130 0.00 0.00 0.00 5.28
2754 3471 5.309638 TGATGATTTGTTTTCAGTACCGGA 58.690 37.500 9.46 0.00 0.00 5.14
2755 3472 5.180492 TGATGATTTGTTTTCAGTACCGGAC 59.820 40.000 9.46 1.42 0.00 4.79
2756 3473 4.710324 TGATTTGTTTTCAGTACCGGACT 58.290 39.130 9.46 4.30 39.82 3.85
2757 3474 5.856156 TGATTTGTTTTCAGTACCGGACTA 58.144 37.500 9.46 0.00 35.64 2.59
2758 3475 6.289834 TGATTTGTTTTCAGTACCGGACTAA 58.710 36.000 9.46 0.00 35.64 2.24
2759 3476 6.766944 TGATTTGTTTTCAGTACCGGACTAAA 59.233 34.615 9.46 3.33 35.64 1.85
2760 3477 6.998968 TTTGTTTTCAGTACCGGACTAAAA 57.001 33.333 9.46 3.18 35.64 1.52
2761 3478 7.571080 TTTGTTTTCAGTACCGGACTAAAAT 57.429 32.000 9.46 0.00 35.64 1.82
2762 3479 8.674263 TTTGTTTTCAGTACCGGACTAAAATA 57.326 30.769 9.46 10.05 35.64 1.40
2763 3480 8.674263 TTGTTTTCAGTACCGGACTAAAATAA 57.326 30.769 9.46 14.21 35.64 1.40
2764 3481 8.674263 TGTTTTCAGTACCGGACTAAAATAAA 57.326 30.769 9.46 1.94 35.64 1.40
2765 3482 8.776470 TGTTTTCAGTACCGGACTAAAATAAAG 58.224 33.333 9.46 0.00 35.64 1.85
2766 3483 8.992073 GTTTTCAGTACCGGACTAAAATAAAGA 58.008 33.333 9.46 0.00 35.64 2.52
2767 3484 9.729281 TTTTCAGTACCGGACTAAAATAAAGAT 57.271 29.630 9.46 0.00 35.64 2.40
2878 3595 9.135189 TCTAGAATTACTAGTTAATTGCCCGTA 57.865 33.333 0.00 0.00 46.15 4.02
2912 3629 5.163519 GGGGACATACAAATTCTTGTGGATG 60.164 44.000 0.81 0.00 45.53 3.51
2922 3639 3.417069 TCTTGTGGATGAACACCGATT 57.583 42.857 0.00 0.00 40.62 3.34
3301 4032 7.928402 GTTATGCTCAACGAAAACAATAAGTG 58.072 34.615 0.00 0.00 0.00 3.16
3302 4033 4.286910 TGCTCAACGAAAACAATAAGTGC 58.713 39.130 0.00 0.00 0.00 4.40
3303 4034 3.668656 GCTCAACGAAAACAATAAGTGCC 59.331 43.478 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.980702 TGGGTGCTGGCCTTGCAG 62.981 66.667 21.12 3.86 41.41 4.41
2 3 4.536526 TTGGGTGCTGGCCTTGCA 62.537 61.111 17.71 17.71 38.19 4.08
3 4 3.688159 CTTGGGTGCTGGCCTTGC 61.688 66.667 3.32 9.51 0.00 4.01
4 5 1.531365 TTCTTGGGTGCTGGCCTTG 60.531 57.895 3.32 0.00 0.00 3.61
8 9 3.365265 CCGTTCTTGGGTGCTGGC 61.365 66.667 0.00 0.00 0.00 4.85
9 10 2.113139 ACCGTTCTTGGGTGCTGG 59.887 61.111 0.00 0.00 36.14 4.85
14 15 2.424302 CGGTCACCGTTCTTGGGT 59.576 61.111 8.54 0.00 42.73 4.51
26 27 2.429930 CCTTGGTGGCTTCGGTCA 59.570 61.111 0.00 0.00 0.00 4.02
27 28 2.359975 CCCTTGGTGGCTTCGGTC 60.360 66.667 0.00 0.00 0.00 4.79
35 36 4.506255 GGATCCGGCCCTTGGTGG 62.506 72.222 0.00 0.00 0.00 4.61
36 37 4.856801 CGGATCCGGCCCTTGGTG 62.857 72.222 26.95 0.00 35.56 4.17
52 53 1.857318 ATCTACTCCGATCTGCCGCG 61.857 60.000 0.00 0.00 0.00 6.46
53 54 0.109504 GATCTACTCCGATCTGCCGC 60.110 60.000 0.00 0.00 37.43 6.53
54 55 0.167033 CGATCTACTCCGATCTGCCG 59.833 60.000 0.00 0.00 38.09 5.69
55 56 0.523966 CCGATCTACTCCGATCTGCC 59.476 60.000 0.00 0.00 38.09 4.85
56 57 0.523966 CCCGATCTACTCCGATCTGC 59.476 60.000 0.00 0.00 38.09 4.26
57 58 1.169577 CCCCGATCTACTCCGATCTG 58.830 60.000 0.00 0.00 38.09 2.90
58 59 0.772384 ACCCCGATCTACTCCGATCT 59.228 55.000 0.00 0.00 38.09 2.75
59 60 1.166989 GACCCCGATCTACTCCGATC 58.833 60.000 0.00 0.00 37.13 3.69
60 61 0.605860 CGACCCCGATCTACTCCGAT 60.606 60.000 0.00 0.00 38.22 4.18
61 62 1.227764 CGACCCCGATCTACTCCGA 60.228 63.158 0.00 0.00 38.22 4.55
62 63 1.227764 TCGACCCCGATCTACTCCG 60.228 63.158 0.00 0.00 40.30 4.63
63 64 0.890090 CCTCGACCCCGATCTACTCC 60.890 65.000 0.00 0.00 44.62 3.85
64 65 0.108207 TCCTCGACCCCGATCTACTC 59.892 60.000 0.00 0.00 44.62 2.59
65 66 0.179023 GTCCTCGACCCCGATCTACT 60.179 60.000 0.00 0.00 44.62 2.57
66 67 1.505477 CGTCCTCGACCCCGATCTAC 61.505 65.000 0.00 0.00 44.62 2.59
67 68 1.227764 CGTCCTCGACCCCGATCTA 60.228 63.158 0.00 0.00 44.62 1.98
68 69 2.516460 CGTCCTCGACCCCGATCT 60.516 66.667 0.00 0.00 44.62 2.75
69 70 2.117156 TTCGTCCTCGACCCCGATC 61.117 63.158 0.00 0.00 46.03 3.69
70 71 2.044650 TTCGTCCTCGACCCCGAT 60.045 61.111 0.00 0.00 46.03 4.18
71 72 3.058160 GTTCGTCCTCGACCCCGA 61.058 66.667 0.00 0.00 46.03 5.14
72 73 2.609183 GATGTTCGTCCTCGACCCCG 62.609 65.000 0.00 0.00 46.03 5.73
73 74 1.141234 GATGTTCGTCCTCGACCCC 59.859 63.158 0.00 0.00 46.03 4.95
74 75 0.458025 GTGATGTTCGTCCTCGACCC 60.458 60.000 0.00 0.00 46.03 4.46
75 76 0.458025 GGTGATGTTCGTCCTCGACC 60.458 60.000 0.00 0.00 46.03 4.79
76 77 0.242825 TGGTGATGTTCGTCCTCGAC 59.757 55.000 0.00 0.00 46.03 4.20
77 78 1.135112 CATGGTGATGTTCGTCCTCGA 60.135 52.381 0.00 0.00 44.66 4.04
78 79 1.280982 CATGGTGATGTTCGTCCTCG 58.719 55.000 0.00 0.00 38.55 4.63
79 80 1.656652 CCATGGTGATGTTCGTCCTC 58.343 55.000 2.57 0.00 0.00 3.71
80 81 0.392998 GCCATGGTGATGTTCGTCCT 60.393 55.000 14.67 0.00 0.00 3.85
81 82 1.376609 GGCCATGGTGATGTTCGTCC 61.377 60.000 14.67 0.00 0.00 4.79
82 83 0.676466 TGGCCATGGTGATGTTCGTC 60.676 55.000 14.67 0.00 0.00 4.20
83 84 0.960364 GTGGCCATGGTGATGTTCGT 60.960 55.000 9.72 0.00 0.00 3.85
84 85 1.656818 GGTGGCCATGGTGATGTTCG 61.657 60.000 9.72 0.00 0.00 3.95
85 86 0.611618 TGGTGGCCATGGTGATGTTC 60.612 55.000 9.72 0.00 0.00 3.18
86 87 0.041535 ATGGTGGCCATGGTGATGTT 59.958 50.000 9.72 0.00 43.39 2.71
87 88 0.396139 GATGGTGGCCATGGTGATGT 60.396 55.000 9.72 0.00 45.26 3.06
88 89 0.396001 TGATGGTGGCCATGGTGATG 60.396 55.000 9.72 0.00 45.26 3.07
89 90 0.559205 ATGATGGTGGCCATGGTGAT 59.441 50.000 9.72 0.00 45.26 3.06
90 91 0.106569 GATGATGGTGGCCATGGTGA 60.107 55.000 9.72 0.00 45.26 4.02
91 92 1.449726 CGATGATGGTGGCCATGGTG 61.450 60.000 9.72 0.00 45.26 4.17
92 93 1.152902 CGATGATGGTGGCCATGGT 60.153 57.895 9.72 0.00 45.26 3.55
93 94 0.887836 CTCGATGATGGTGGCCATGG 60.888 60.000 9.72 7.63 45.26 3.66
94 95 1.512996 GCTCGATGATGGTGGCCATG 61.513 60.000 9.72 0.00 45.26 3.66
96 97 2.190313 GCTCGATGATGGTGGCCA 59.810 61.111 0.00 0.00 38.19 5.36
97 98 2.969238 CGCTCGATGATGGTGGCC 60.969 66.667 0.00 0.00 0.00 5.36
98 99 1.953138 CTCGCTCGATGATGGTGGC 60.953 63.158 0.00 0.00 0.00 5.01
99 100 1.300465 CCTCGCTCGATGATGGTGG 60.300 63.158 0.00 0.00 0.00 4.61
100 101 0.103026 TTCCTCGCTCGATGATGGTG 59.897 55.000 0.00 0.00 0.00 4.17
101 102 0.103208 GTTCCTCGCTCGATGATGGT 59.897 55.000 0.00 0.00 0.00 3.55
102 103 0.598680 GGTTCCTCGCTCGATGATGG 60.599 60.000 0.00 0.00 0.00 3.51
103 104 0.936764 CGGTTCCTCGCTCGATGATG 60.937 60.000 0.00 0.00 0.00 3.07
104 105 1.360551 CGGTTCCTCGCTCGATGAT 59.639 57.895 0.00 0.00 0.00 2.45
105 106 2.798689 CGGTTCCTCGCTCGATGA 59.201 61.111 0.00 0.00 0.00 2.92
132 133 4.410400 GGAGGTGGTGGGCTTCGG 62.410 72.222 0.00 0.00 0.00 4.30
133 134 4.410400 GGGAGGTGGTGGGCTTCG 62.410 72.222 0.00 0.00 0.00 3.79
134 135 4.048470 GGGGAGGTGGTGGGCTTC 62.048 72.222 0.00 0.00 0.00 3.86
140 141 4.489771 GATGGCGGGGAGGTGGTG 62.490 72.222 0.00 0.00 0.00 4.17
143 144 4.489771 GTGGATGGCGGGGAGGTG 62.490 72.222 0.00 0.00 0.00 4.00
145 146 3.492353 ATGTGGATGGCGGGGAGG 61.492 66.667 0.00 0.00 0.00 4.30
146 147 2.203252 CATGTGGATGGCGGGGAG 60.203 66.667 0.00 0.00 0.00 4.30
147 148 3.807839 CCATGTGGATGGCGGGGA 61.808 66.667 0.00 0.00 43.00 4.81
154 155 0.754217 CTTCCCTGGCCATGTGGATG 60.754 60.000 16.93 15.31 37.39 3.51
155 156 1.217057 ACTTCCCTGGCCATGTGGAT 61.217 55.000 16.93 3.65 37.39 3.41
156 157 1.852157 ACTTCCCTGGCCATGTGGA 60.852 57.895 5.51 10.58 37.39 4.02
157 158 1.679977 CACTTCCCTGGCCATGTGG 60.680 63.158 5.51 7.95 38.53 4.17
158 159 1.679977 CCACTTCCCTGGCCATGTG 60.680 63.158 5.51 10.62 0.00 3.21
159 160 2.765969 CCACTTCCCTGGCCATGT 59.234 61.111 5.51 0.00 0.00 3.21
165 166 4.366684 GGTGGGCCACTTCCCTGG 62.367 72.222 33.87 0.00 46.67 4.45
166 167 3.260100 AGGTGGGCCACTTCCCTG 61.260 66.667 33.87 0.00 46.67 4.45
167 168 3.260100 CAGGTGGGCCACTTCCCT 61.260 66.667 33.87 21.22 46.67 4.20
168 169 3.569200 GACAGGTGGGCCACTTCCC 62.569 68.421 33.87 19.20 46.73 3.97
169 170 2.034221 GACAGGTGGGCCACTTCC 59.966 66.667 33.87 19.58 37.19 3.46
170 171 2.034221 GGACAGGTGGGCCACTTC 59.966 66.667 33.87 25.47 37.19 3.01
171 172 2.776526 TGGACAGGTGGGCCACTT 60.777 61.111 33.87 26.14 37.19 3.16
172 173 3.570212 GTGGACAGGTGGGCCACT 61.570 66.667 33.87 16.77 46.56 4.00
237 238 3.814615 CTCGGATCCATGGCGGTGG 62.815 68.421 13.41 2.54 40.76 4.61
238 239 2.280389 CTCGGATCCATGGCGGTG 60.280 66.667 13.41 0.00 35.57 4.94
239 240 4.241555 GCTCGGATCCATGGCGGT 62.242 66.667 13.41 0.00 35.57 5.68
240 241 4.996434 GGCTCGGATCCATGGCGG 62.996 72.222 13.41 0.00 0.00 6.13
243 244 4.240103 TGCGGCTCGGATCCATGG 62.240 66.667 13.41 4.97 0.00 3.66
244 245 2.664185 CTGCGGCTCGGATCCATG 60.664 66.667 13.41 4.51 0.00 3.66
245 246 3.933722 CCTGCGGCTCGGATCCAT 61.934 66.667 13.41 0.00 0.00 3.41
368 369 4.664677 CTAATCCCCTCGCCGCCG 62.665 72.222 0.00 0.00 0.00 6.46
369 370 4.990553 GCTAATCCCCTCGCCGCC 62.991 72.222 0.00 0.00 0.00 6.13
370 371 3.930012 AGCTAATCCCCTCGCCGC 61.930 66.667 0.00 0.00 0.00 6.53
371 372 2.029666 CAGCTAATCCCCTCGCCG 59.970 66.667 0.00 0.00 0.00 6.46
372 373 2.105806 CTCCAGCTAATCCCCTCGCC 62.106 65.000 0.00 0.00 0.00 5.54
373 374 1.115930 TCTCCAGCTAATCCCCTCGC 61.116 60.000 0.00 0.00 0.00 5.03
374 375 1.342819 CTTCTCCAGCTAATCCCCTCG 59.657 57.143 0.00 0.00 0.00 4.63
375 376 1.696884 CCTTCTCCAGCTAATCCCCTC 59.303 57.143 0.00 0.00 0.00 4.30
376 377 1.697291 CCCTTCTCCAGCTAATCCCCT 60.697 57.143 0.00 0.00 0.00 4.79
377 378 0.767998 CCCTTCTCCAGCTAATCCCC 59.232 60.000 0.00 0.00 0.00 4.81
378 379 0.767998 CCCCTTCTCCAGCTAATCCC 59.232 60.000 0.00 0.00 0.00 3.85
379 380 0.767998 CCCCCTTCTCCAGCTAATCC 59.232 60.000 0.00 0.00 0.00 3.01
429 430 2.440796 TAGGGTAGGCGACACGGG 60.441 66.667 0.00 0.00 36.14 5.28
430 431 2.487532 CCTAGGGTAGGCGACACGG 61.488 68.421 0.00 0.00 39.48 4.94
431 432 3.117372 CCTAGGGTAGGCGACACG 58.883 66.667 0.00 0.00 39.48 4.49
439 440 2.487532 CCCGTGTCGCCTAGGGTAG 61.488 68.421 11.72 0.00 39.05 3.18
440 441 2.440796 CCCGTGTCGCCTAGGGTA 60.441 66.667 11.72 0.00 39.05 3.69
450 451 3.282374 ATTGGAAGGCCCCCGTGTC 62.282 63.158 0.00 0.00 0.00 3.67
451 452 3.264845 ATTGGAAGGCCCCCGTGT 61.265 61.111 0.00 0.00 0.00 4.49
452 453 2.572333 ATCATTGGAAGGCCCCCGTG 62.572 60.000 0.00 4.93 0.00 4.94
453 454 1.874299 AATCATTGGAAGGCCCCCGT 61.874 55.000 0.00 0.00 0.00 5.28
454 455 0.184933 TAATCATTGGAAGGCCCCCG 59.815 55.000 0.00 0.00 0.00 5.73
455 456 2.702270 ATAATCATTGGAAGGCCCCC 57.298 50.000 0.00 0.90 0.00 5.40
456 457 7.619302 TCAAATATATAATCATTGGAAGGCCCC 59.381 37.037 0.00 0.00 0.00 5.80
457 458 8.593945 TCAAATATATAATCATTGGAAGGCCC 57.406 34.615 0.00 0.00 0.00 5.80
501 502 4.172505 TGTGTTTGTACTGCTTGCAAAAG 58.827 39.130 0.00 3.82 40.94 2.27
507 508 3.251729 AGCATCTGTGTTTGTACTGCTTG 59.748 43.478 0.00 0.00 35.06 4.01
509 510 3.070018 GAGCATCTGTGTTTGTACTGCT 58.930 45.455 0.61 0.61 40.89 4.24
510 511 2.807967 TGAGCATCTGTGTTTGTACTGC 59.192 45.455 0.00 0.00 34.92 4.40
521 522 1.413812 TGTGTGTCTGTGAGCATCTGT 59.586 47.619 0.00 0.00 34.92 3.41
549 585 2.885266 GTGTATCGGAGGTGCTCATAGA 59.115 50.000 0.00 0.00 31.08 1.98
564 600 0.175760 TTCTGCCGGCTCAGTGTATC 59.824 55.000 29.70 0.00 35.63 2.24
566 602 1.292223 GTTCTGCCGGCTCAGTGTA 59.708 57.895 29.70 3.67 35.63 2.90
581 617 5.635280 TGACTTCGTCAATCTCAAGATGTTC 59.365 40.000 0.00 0.00 39.78 3.18
585 621 4.021104 TGGTGACTTCGTCAATCTCAAGAT 60.021 41.667 0.00 0.00 44.49 2.40
609 645 7.400339 AGAAGTTTCAGTCTATTATGGAGTCCA 59.600 37.037 15.88 15.88 38.19 4.02
622 661 4.280677 CAGTGAGAGGAGAAGTTTCAGTCT 59.719 45.833 0.00 0.00 0.00 3.24
623 662 4.279671 TCAGTGAGAGGAGAAGTTTCAGTC 59.720 45.833 0.00 0.00 0.00 3.51
637 676 8.648557 TTTCCGTTATATTCATTCAGTGAGAG 57.351 34.615 0.00 0.00 38.29 3.20
658 697 6.923508 CCAAGGTTCATGTTCTAAACTTTTCC 59.076 38.462 0.00 0.00 30.26 3.13
673 712 2.879103 ATCGGTCAACCAAGGTTCAT 57.121 45.000 0.51 0.00 36.00 2.57
689 728 5.853936 TGGATAGGTTCTTATGTGGAATCG 58.146 41.667 0.00 0.00 0.00 3.34
691 730 8.281531 TCAAATGGATAGGTTCTTATGTGGAAT 58.718 33.333 0.00 0.00 0.00 3.01
699 738 5.437060 GTGGCTCAAATGGATAGGTTCTTA 58.563 41.667 0.00 0.00 0.00 2.10
700 739 4.273318 GTGGCTCAAATGGATAGGTTCTT 58.727 43.478 0.00 0.00 0.00 2.52
720 759 3.818961 ATCAAATGTGAACTGAGCGTG 57.181 42.857 0.00 0.00 37.30 5.34
723 762 6.587226 TGCAAAATATCAAATGTGAACTGAGC 59.413 34.615 0.00 0.00 37.30 4.26
769 808 7.477494 TCGACGAGACATTTGATTATGTAAGA 58.523 34.615 0.00 0.00 38.80 2.10
780 819 6.019881 TGCACTATATTTCGACGAGACATTTG 60.020 38.462 0.00 0.00 0.00 2.32
785 824 5.035443 ACTTGCACTATATTTCGACGAGAC 58.965 41.667 0.00 0.00 0.00 3.36
793 832 9.443283 CTGCAGAAATTACTTGCACTATATTTC 57.557 33.333 8.42 12.29 34.07 2.17
798 837 4.701651 TGCTGCAGAAATTACTTGCACTAT 59.298 37.500 20.43 0.00 0.00 2.12
820 859 3.542291 GCTACTTAATGCTTCGCTCGTTG 60.542 47.826 0.00 0.00 0.00 4.10
838 877 0.249363 GCCCGGCAGTAAGTAGCTAC 60.249 60.000 16.43 16.43 0.00 3.58
846 885 2.668632 CTGGAAGCCCGGCAGTAA 59.331 61.111 13.15 0.00 34.29 2.24
905 944 3.047877 GCACGAGACCGGTTTGGG 61.048 66.667 9.42 3.69 44.64 4.12
928 967 5.429130 AGCGATCCTCACGATATATAGTGA 58.571 41.667 22.45 22.45 44.11 3.41
1072 1116 4.400109 GCACTCAGACGGCGTCGA 62.400 66.667 31.59 27.64 37.67 4.20
1262 1306 1.626654 CTTGCTAGCGGTGGTTGTCG 61.627 60.000 10.77 0.00 0.00 4.35
1263 1307 1.912371 GCTTGCTAGCGGTGGTTGTC 61.912 60.000 10.77 0.00 37.71 3.18
1264 1308 1.966451 GCTTGCTAGCGGTGGTTGT 60.966 57.895 10.77 0.00 37.71 3.32
1265 1309 2.870372 GCTTGCTAGCGGTGGTTG 59.130 61.111 10.77 0.00 37.71 3.77
1281 1325 2.413371 GCGCTAGCTAATTAATGGCAGC 60.413 50.000 13.93 15.92 41.01 5.25
1290 1340 1.068748 GCATGCATGCGCTAGCTAATT 60.069 47.619 33.99 5.52 44.67 1.40
1310 1360 4.376413 GGACATCTACATTAATTGCGAGCG 60.376 45.833 0.00 0.00 0.00 5.03
1311 1361 4.511454 TGGACATCTACATTAATTGCGAGC 59.489 41.667 0.00 0.00 0.00 5.03
1312 1362 6.400409 CGATGGACATCTACATTAATTGCGAG 60.400 42.308 10.28 0.00 35.72 5.03
1313 1363 5.405269 CGATGGACATCTACATTAATTGCGA 59.595 40.000 10.28 0.00 35.72 5.10
1327 1377 2.658593 CGCGACCCGATGGACATC 60.659 66.667 0.00 2.22 40.02 3.06
1328 1378 3.426117 GACGCGACCCGATGGACAT 62.426 63.158 15.93 0.00 41.02 3.06
1329 1379 4.124351 GACGCGACCCGATGGACA 62.124 66.667 15.93 0.00 41.02 4.02
1330 1380 3.753070 GAGACGCGACCCGATGGAC 62.753 68.421 15.93 0.00 41.02 4.02
1331 1381 3.515286 GAGACGCGACCCGATGGA 61.515 66.667 15.93 0.00 41.02 3.41
1332 1382 3.758088 CTGAGACGCGACCCGATGG 62.758 68.421 15.93 0.00 41.02 3.51
1333 1383 2.278206 CTGAGACGCGACCCGATG 60.278 66.667 15.93 0.00 41.02 3.84
1334 1384 3.518998 CCTGAGACGCGACCCGAT 61.519 66.667 15.93 0.00 41.02 4.18
1336 1386 4.778415 CACCTGAGACGCGACCCG 62.778 72.222 15.93 0.00 44.21 5.28
1337 1387 3.343788 CTCACCTGAGACGCGACCC 62.344 68.421 15.93 0.00 44.74 4.46
1338 1388 2.179517 CTCACCTGAGACGCGACC 59.820 66.667 15.93 3.72 44.74 4.79
1475 1545 3.496884 TCAAGTTGGAGATGCGTACAAAC 59.503 43.478 2.34 0.00 0.00 2.93
1492 1575 1.278985 TGCTCGTGGGATTGATCAAGT 59.721 47.619 14.54 2.33 0.00 3.16
1503 1598 1.153667 GAGAGAAGCTGCTCGTGGG 60.154 63.158 16.37 0.00 39.87 4.61
1504 1599 1.515952 CGAGAGAAGCTGCTCGTGG 60.516 63.158 16.37 5.73 46.43 4.94
1505 1600 4.069837 CGAGAGAAGCTGCTCGTG 57.930 61.111 16.37 8.87 46.43 4.35
1508 1603 1.226547 CCGACGAGAGAAGCTGCTC 60.227 63.158 14.55 14.55 35.11 4.26
1518 1618 2.756840 TTGAGTACTCTCCGACGAGA 57.243 50.000 23.01 0.00 43.08 4.04
1519 1619 5.064962 AGTTAATTGAGTACTCTCCGACGAG 59.935 44.000 23.01 0.00 39.75 4.18
1520 1620 4.940046 AGTTAATTGAGTACTCTCCGACGA 59.060 41.667 23.01 0.00 39.75 4.20
1521 1621 5.163784 TGAGTTAATTGAGTACTCTCCGACG 60.164 44.000 23.01 0.00 39.18 5.12
1522 1622 6.192234 TGAGTTAATTGAGTACTCTCCGAC 57.808 41.667 23.01 14.38 39.18 4.79
1524 1624 6.796426 TCATGAGTTAATTGAGTACTCTCCG 58.204 40.000 23.01 5.58 39.18 4.63
1525 1625 8.035394 TGTTCATGAGTTAATTGAGTACTCTCC 58.965 37.037 23.01 0.00 39.18 3.71
1527 1627 9.950496 ATTGTTCATGAGTTAATTGAGTACTCT 57.050 29.630 23.01 6.40 39.18 3.24
1529 1629 8.873830 CGATTGTTCATGAGTTAATTGAGTACT 58.126 33.333 0.00 0.00 0.00 2.73
1530 1630 8.116753 CCGATTGTTCATGAGTTAATTGAGTAC 58.883 37.037 13.37 0.00 0.00 2.73
1531 1631 8.038351 TCCGATTGTTCATGAGTTAATTGAGTA 58.962 33.333 13.37 2.28 0.00 2.59
1532 1632 6.878923 TCCGATTGTTCATGAGTTAATTGAGT 59.121 34.615 13.37 0.00 0.00 3.41
1545 1682 5.598416 TCTGTGTAGATCCGATTGTTCAT 57.402 39.130 0.00 0.00 0.00 2.57
1547 1684 4.747108 CCATCTGTGTAGATCCGATTGTTC 59.253 45.833 0.00 0.00 41.71 3.18
1551 1688 4.474394 TCTCCATCTGTGTAGATCCGATT 58.526 43.478 0.00 0.00 41.71 3.34
1601 1753 0.181350 CCCCTGGTACTCATGGAAGC 59.819 60.000 0.00 0.00 33.60 3.86
1775 1927 3.928005 TGTACTCGGAGATGAGGTAGT 57.072 47.619 12.86 0.00 40.39 2.73
1833 1987 7.518689 GTCTTAGTAGACTGCGACTATTCGATT 60.519 40.741 6.67 0.00 46.05 3.34
1834 1988 6.073657 GTCTTAGTAGACTGCGACTATTCGAT 60.074 42.308 6.67 0.00 46.05 3.59
1836 1990 5.433855 GTCTTAGTAGACTGCGACTATTCG 58.566 45.833 0.00 0.00 45.99 3.34
1856 2010 9.624373 AGCATTTTCTGATACATAATGAAGTCT 57.376 29.630 0.00 0.00 0.00 3.24
1868 2205 8.978539 TCACACGAATATAGCATTTTCTGATAC 58.021 33.333 0.00 0.00 0.00 2.24
1888 2225 9.546909 GCATGGATTTTAATATAAGATCACACG 57.453 33.333 0.00 0.00 0.00 4.49
1958 2624 6.461788 GGCTAGGTCTTAGTCGAATGAGATTT 60.462 42.308 10.64 5.12 0.00 2.17
1959 2625 5.010213 GGCTAGGTCTTAGTCGAATGAGATT 59.990 44.000 10.64 5.45 0.00 2.40
1960 2626 4.521256 GGCTAGGTCTTAGTCGAATGAGAT 59.479 45.833 10.64 0.00 0.00 2.75
1961 2627 3.884091 GGCTAGGTCTTAGTCGAATGAGA 59.116 47.826 2.95 2.95 0.00 3.27
1962 2628 3.632604 TGGCTAGGTCTTAGTCGAATGAG 59.367 47.826 0.00 0.00 36.76 2.90
1963 2629 3.380637 GTGGCTAGGTCTTAGTCGAATGA 59.619 47.826 0.00 0.00 36.76 2.57
1964 2630 3.130516 TGTGGCTAGGTCTTAGTCGAATG 59.869 47.826 0.00 0.00 36.76 2.67
1966 2632 2.490903 GTGTGGCTAGGTCTTAGTCGAA 59.509 50.000 0.00 0.00 36.76 3.71
1968 2634 1.134560 GGTGTGGCTAGGTCTTAGTCG 59.865 57.143 0.00 0.00 36.76 4.18
1969 2635 1.481363 GGGTGTGGCTAGGTCTTAGTC 59.519 57.143 0.00 0.00 34.46 2.59
1970 2636 1.569653 GGGTGTGGCTAGGTCTTAGT 58.430 55.000 0.00 0.00 0.00 2.24
1972 2638 0.416231 AGGGGTGTGGCTAGGTCTTA 59.584 55.000 0.00 0.00 0.00 2.10
1975 2641 1.209747 CTTTAGGGGTGTGGCTAGGTC 59.790 57.143 0.00 0.00 0.00 3.85
1979 2645 1.368374 AAGCTTTAGGGGTGTGGCTA 58.632 50.000 0.00 0.00 0.00 3.93
1980 2646 1.368374 TAAGCTTTAGGGGTGTGGCT 58.632 50.000 3.20 0.00 0.00 4.75
1982 2648 3.821033 GCATATAAGCTTTAGGGGTGTGG 59.179 47.826 3.20 0.00 0.00 4.17
1983 2649 3.498397 CGCATATAAGCTTTAGGGGTGTG 59.502 47.826 3.20 0.00 0.00 3.82
1984 2650 3.496160 CCGCATATAAGCTTTAGGGGTGT 60.496 47.826 3.20 0.00 0.00 4.16
1985 2651 3.074412 CCGCATATAAGCTTTAGGGGTG 58.926 50.000 3.20 0.00 0.00 4.61
1986 2652 2.709397 ACCGCATATAAGCTTTAGGGGT 59.291 45.455 3.20 12.92 37.46 4.95
1988 2654 3.740115 ACACCGCATATAAGCTTTAGGG 58.260 45.455 3.20 0.65 0.00 3.53
1989 2655 6.854496 TTTACACCGCATATAAGCTTTAGG 57.146 37.500 3.20 2.23 0.00 2.69
1990 2656 7.376072 GCTTTTTACACCGCATATAAGCTTTAG 59.624 37.037 3.20 0.00 35.21 1.85
1993 2659 5.124776 TGCTTTTTACACCGCATATAAGCTT 59.875 36.000 3.48 3.48 38.02 3.74
1995 2661 4.915704 TGCTTTTTACACCGCATATAAGC 58.084 39.130 0.00 0.00 37.76 3.09
1996 2662 5.451023 CGTTGCTTTTTACACCGCATATAAG 59.549 40.000 0.00 0.00 31.77 1.73
2007 2677 5.818857 AGTACTTCCTTCGTTGCTTTTTACA 59.181 36.000 0.00 0.00 0.00 2.41
2016 2686 5.295152 ACCTTGTTAGTACTTCCTTCGTTG 58.705 41.667 0.00 0.00 0.00 4.10
2052 2763 7.097192 ACATTCCAGCATATGTACGTATTAGG 58.903 38.462 4.78 7.64 33.42 2.69
2057 2768 5.867174 GCATACATTCCAGCATATGTACGTA 59.133 40.000 4.29 0.00 39.34 3.57
2067 2778 1.748244 GCCTCTGCATACATTCCAGCA 60.748 52.381 0.00 0.00 37.47 4.41
2170 2887 4.980805 GCGTCGCACTTCCCACCA 62.981 66.667 13.44 0.00 0.00 4.17
2228 2945 2.283809 CTCCTCCAGGATCCGGGT 59.716 66.667 27.68 0.00 44.46 5.28
2234 2951 1.965754 GCGTTGAGCTCCTCCAGGAT 61.966 60.000 12.15 0.00 44.46 3.24
2266 2983 3.115892 GCGGCGATGAACGTTCCA 61.116 61.111 24.78 13.50 44.60 3.53
2423 3140 0.388134 CAGAACACGTACTGGTCCCG 60.388 60.000 6.71 0.00 37.29 5.14
2545 3262 0.970427 TGAGGCTGGCGTCTATGTGA 60.970 55.000 14.76 0.00 0.00 3.58
2577 3294 2.307768 GTCATGGACTCTCGGGACATA 58.692 52.381 0.00 0.00 0.00 2.29
2578 3295 1.115467 GTCATGGACTCTCGGGACAT 58.885 55.000 0.00 0.00 0.00 3.06
2579 3296 1.313091 CGTCATGGACTCTCGGGACA 61.313 60.000 0.00 0.00 0.00 4.02
2580 3297 1.433879 CGTCATGGACTCTCGGGAC 59.566 63.158 0.00 0.00 0.00 4.46
2581 3298 2.415608 GCGTCATGGACTCTCGGGA 61.416 63.158 0.00 0.00 0.00 5.14
2582 3299 1.949847 AAGCGTCATGGACTCTCGGG 61.950 60.000 0.00 0.00 26.82 5.14
2583 3300 0.803768 CAAGCGTCATGGACTCTCGG 60.804 60.000 0.00 0.00 26.82 4.63
2584 3301 0.803768 CCAAGCGTCATGGACTCTCG 60.804 60.000 0.00 0.00 40.56 4.04
2585 3302 0.460987 CCCAAGCGTCATGGACTCTC 60.461 60.000 5.05 0.00 40.56 3.20
2586 3303 1.599047 CCCAAGCGTCATGGACTCT 59.401 57.895 5.05 0.00 40.56 3.24
2587 3304 2.109126 GCCCAAGCGTCATGGACTC 61.109 63.158 5.05 0.00 40.56 3.36
2588 3305 2.045926 GCCCAAGCGTCATGGACT 60.046 61.111 5.05 0.00 40.56 3.85
2589 3306 3.134127 GGCCCAAGCGTCATGGAC 61.134 66.667 0.00 0.00 40.56 4.02
2590 3307 3.645660 TGGCCCAAGCGTCATGGA 61.646 61.111 0.00 0.00 40.56 3.41
2591 3308 3.443045 GTGGCCCAAGCGTCATGG 61.443 66.667 0.00 0.00 41.24 3.66
2592 3309 3.803082 CGTGGCCCAAGCGTCATG 61.803 66.667 0.00 0.00 41.24 3.07
2593 3310 3.545124 TTCGTGGCCCAAGCGTCAT 62.545 57.895 0.00 0.00 41.24 3.06
2594 3311 4.243008 TTCGTGGCCCAAGCGTCA 62.243 61.111 0.00 0.00 41.24 4.35
2595 3312 3.723348 GTTCGTGGCCCAAGCGTC 61.723 66.667 0.00 0.00 41.24 5.19
2614 3331 4.745751 TACGAAAGGCCCCGCACG 62.746 66.667 0.00 1.05 0.00 5.34
2615 3332 2.124860 ATACGAAAGGCCCCGCAC 60.125 61.111 0.00 0.00 0.00 5.34
2616 3333 2.124901 CATACGAAAGGCCCCGCA 60.125 61.111 0.00 0.00 0.00 5.69
2617 3334 2.124860 ACATACGAAAGGCCCCGC 60.125 61.111 0.00 0.00 0.00 6.13
2618 3335 1.523032 GGACATACGAAAGGCCCCG 60.523 63.158 0.00 3.24 0.00 5.73
2619 3336 0.179054 GAGGACATACGAAAGGCCCC 60.179 60.000 0.00 0.00 0.00 5.80
2620 3337 0.831307 AGAGGACATACGAAAGGCCC 59.169 55.000 0.00 0.00 0.00 5.80
2621 3338 2.693267 AAGAGGACATACGAAAGGCC 57.307 50.000 0.00 0.00 0.00 5.19
2622 3339 3.426292 GCAAAAGAGGACATACGAAAGGC 60.426 47.826 0.00 0.00 0.00 4.35
2623 3340 3.181520 CGCAAAAGAGGACATACGAAAGG 60.182 47.826 0.00 0.00 0.00 3.11
2624 3341 3.432252 ACGCAAAAGAGGACATACGAAAG 59.568 43.478 0.00 0.00 0.00 2.62
2625 3342 3.395639 ACGCAAAAGAGGACATACGAAA 58.604 40.909 0.00 0.00 0.00 3.46
2626 3343 3.034721 ACGCAAAAGAGGACATACGAA 57.965 42.857 0.00 0.00 0.00 3.85
2627 3344 2.734606 CAACGCAAAAGAGGACATACGA 59.265 45.455 0.00 0.00 0.00 3.43
2628 3345 2.734606 TCAACGCAAAAGAGGACATACG 59.265 45.455 0.00 0.00 0.00 3.06
2629 3346 4.946784 ATCAACGCAAAAGAGGACATAC 57.053 40.909 0.00 0.00 0.00 2.39
2630 3347 7.624360 AAATATCAACGCAAAAGAGGACATA 57.376 32.000 0.00 0.00 0.00 2.29
2631 3348 6.515272 AAATATCAACGCAAAAGAGGACAT 57.485 33.333 0.00 0.00 0.00 3.06
2632 3349 5.957842 AAATATCAACGCAAAAGAGGACA 57.042 34.783 0.00 0.00 0.00 4.02
2633 3350 6.088085 CACAAAATATCAACGCAAAAGAGGAC 59.912 38.462 0.00 0.00 0.00 3.85
2634 3351 6.148948 CACAAAATATCAACGCAAAAGAGGA 58.851 36.000 0.00 0.00 0.00 3.71
2635 3352 5.920273 ACACAAAATATCAACGCAAAAGAGG 59.080 36.000 0.00 0.00 0.00 3.69
2636 3353 6.129115 CCACACAAAATATCAACGCAAAAGAG 60.129 38.462 0.00 0.00 0.00 2.85
2637 3354 5.689514 CCACACAAAATATCAACGCAAAAGA 59.310 36.000 0.00 0.00 0.00 2.52
2638 3355 5.612276 GCCACACAAAATATCAACGCAAAAG 60.612 40.000 0.00 0.00 0.00 2.27
2639 3356 4.210120 GCCACACAAAATATCAACGCAAAA 59.790 37.500 0.00 0.00 0.00 2.44
2640 3357 3.738282 GCCACACAAAATATCAACGCAAA 59.262 39.130 0.00 0.00 0.00 3.68
2641 3358 3.312828 GCCACACAAAATATCAACGCAA 58.687 40.909 0.00 0.00 0.00 4.85
2642 3359 2.666895 CGCCACACAAAATATCAACGCA 60.667 45.455 0.00 0.00 0.00 5.24
2643 3360 1.910819 CGCCACACAAAATATCAACGC 59.089 47.619 0.00 0.00 0.00 4.84
2644 3361 3.463533 TCGCCACACAAAATATCAACG 57.536 42.857 0.00 0.00 0.00 4.10
2645 3362 3.547468 GCATCGCCACACAAAATATCAAC 59.453 43.478 0.00 0.00 0.00 3.18
2646 3363 3.730362 CGCATCGCCACACAAAATATCAA 60.730 43.478 0.00 0.00 0.00 2.57
2647 3364 2.223226 CGCATCGCCACACAAAATATCA 60.223 45.455 0.00 0.00 0.00 2.15
2648 3365 2.375110 CGCATCGCCACACAAAATATC 58.625 47.619 0.00 0.00 0.00 1.63
2649 3366 1.065401 CCGCATCGCCACACAAAATAT 59.935 47.619 0.00 0.00 0.00 1.28
2650 3367 0.449786 CCGCATCGCCACACAAAATA 59.550 50.000 0.00 0.00 0.00 1.40
2651 3368 1.212490 CCGCATCGCCACACAAAAT 59.788 52.632 0.00 0.00 0.00 1.82
2652 3369 1.729470 AACCGCATCGCCACACAAAA 61.729 50.000 0.00 0.00 0.00 2.44
2653 3370 2.190170 AACCGCATCGCCACACAAA 61.190 52.632 0.00 0.00 0.00 2.83
2654 3371 2.593148 AACCGCATCGCCACACAA 60.593 55.556 0.00 0.00 0.00 3.33
2655 3372 3.353029 CAACCGCATCGCCACACA 61.353 61.111 0.00 0.00 0.00 3.72
2656 3373 1.570347 TAACAACCGCATCGCCACAC 61.570 55.000 0.00 0.00 0.00 3.82
2657 3374 0.675208 ATAACAACCGCATCGCCACA 60.675 50.000 0.00 0.00 0.00 4.17
2658 3375 0.027586 GATAACAACCGCATCGCCAC 59.972 55.000 0.00 0.00 0.00 5.01
2659 3376 0.107897 AGATAACAACCGCATCGCCA 60.108 50.000 0.00 0.00 0.00 5.69
2660 3377 0.304705 CAGATAACAACCGCATCGCC 59.695 55.000 0.00 0.00 0.00 5.54
2661 3378 1.004927 GACAGATAACAACCGCATCGC 60.005 52.381 0.00 0.00 0.00 4.58
2662 3379 2.267426 TGACAGATAACAACCGCATCG 58.733 47.619 0.00 0.00 0.00 3.84
2663 3380 4.882671 AATGACAGATAACAACCGCATC 57.117 40.909 0.00 0.00 0.00 3.91
2664 3381 6.751514 TTAAATGACAGATAACAACCGCAT 57.248 33.333 0.00 0.00 0.00 4.73
2665 3382 6.751514 ATTAAATGACAGATAACAACCGCA 57.248 33.333 0.00 0.00 0.00 5.69
2666 3383 9.562583 TTAAATTAAATGACAGATAACAACCGC 57.437 29.630 0.00 0.00 0.00 5.68
2707 3424 6.952773 ATTAGTCACTACAAGTGCCAAAAA 57.047 33.333 2.12 0.00 45.54 1.94
2708 3425 6.544197 TCAATTAGTCACTACAAGTGCCAAAA 59.456 34.615 2.12 0.00 45.54 2.44
2709 3426 6.058833 TCAATTAGTCACTACAAGTGCCAAA 58.941 36.000 2.12 0.00 45.54 3.28
2710 3427 5.616270 TCAATTAGTCACTACAAGTGCCAA 58.384 37.500 2.12 0.00 45.54 4.52
2711 3428 5.222079 TCAATTAGTCACTACAAGTGCCA 57.778 39.130 2.12 0.00 45.54 4.92
2712 3429 5.874810 TCATCAATTAGTCACTACAAGTGCC 59.125 40.000 2.12 0.00 45.54 5.01
2713 3430 6.968131 TCATCAATTAGTCACTACAAGTGC 57.032 37.500 2.12 0.00 45.54 4.40
2715 3432 9.507329 ACAAATCATCAATTAGTCACTACAAGT 57.493 29.630 0.00 0.00 0.00 3.16
2721 3438 9.903682 CTGAAAACAAATCATCAATTAGTCACT 57.096 29.630 0.00 0.00 0.00 3.41
2722 3439 9.683069 ACTGAAAACAAATCATCAATTAGTCAC 57.317 29.630 0.00 0.00 0.00 3.67
2726 3443 9.277565 CGGTACTGAAAACAAATCATCAATTAG 57.722 33.333 0.00 0.00 0.00 1.73
2727 3444 8.240682 CCGGTACTGAAAACAAATCATCAATTA 58.759 33.333 2.31 0.00 0.00 1.40
2728 3445 7.040062 TCCGGTACTGAAAACAAATCATCAATT 60.040 33.333 2.31 0.00 0.00 2.32
2729 3446 6.432783 TCCGGTACTGAAAACAAATCATCAAT 59.567 34.615 2.31 0.00 0.00 2.57
2730 3447 5.765677 TCCGGTACTGAAAACAAATCATCAA 59.234 36.000 2.31 0.00 0.00 2.57
2731 3448 5.180492 GTCCGGTACTGAAAACAAATCATCA 59.820 40.000 2.31 0.00 0.00 3.07
2732 3449 5.411669 AGTCCGGTACTGAAAACAAATCATC 59.588 40.000 2.31 0.00 36.93 2.92
2733 3450 5.313712 AGTCCGGTACTGAAAACAAATCAT 58.686 37.500 2.31 0.00 36.93 2.45
2734 3451 4.710324 AGTCCGGTACTGAAAACAAATCA 58.290 39.130 2.31 0.00 36.93 2.57
2735 3452 6.790285 TTAGTCCGGTACTGAAAACAAATC 57.210 37.500 14.50 0.00 39.39 2.17
2736 3453 7.571080 TTTTAGTCCGGTACTGAAAACAAAT 57.429 32.000 16.20 0.00 39.84 2.32
2737 3454 6.998968 TTTTAGTCCGGTACTGAAAACAAA 57.001 33.333 16.20 7.15 39.84 2.83
2738 3455 8.674263 TTATTTTAGTCCGGTACTGAAAACAA 57.326 30.769 19.87 15.69 44.18 2.83
2739 3456 8.674263 TTTATTTTAGTCCGGTACTGAAAACA 57.326 30.769 19.87 12.44 44.18 2.83
2740 3457 8.992073 TCTTTATTTTAGTCCGGTACTGAAAAC 58.008 33.333 19.87 3.48 44.18 2.43
2741 3458 9.729281 ATCTTTATTTTAGTCCGGTACTGAAAA 57.271 29.630 19.87 17.21 44.18 2.29
2850 3567 9.321562 CGGGCAATTAACTAGTAATTCTAGAAA 57.678 33.333 9.71 0.00 46.53 2.52
2851 3568 8.480501 ACGGGCAATTAACTAGTAATTCTAGAA 58.519 33.333 7.82 7.82 46.53 2.10
2852 3569 8.015185 ACGGGCAATTAACTAGTAATTCTAGA 57.985 34.615 14.86 0.00 46.53 2.43
2854 3571 7.862372 CGTACGGGCAATTAACTAGTAATTCTA 59.138 37.037 7.57 0.00 39.88 2.10
2855 3572 6.698766 CGTACGGGCAATTAACTAGTAATTCT 59.301 38.462 7.57 0.00 39.88 2.40
2856 3573 6.476706 ACGTACGGGCAATTAACTAGTAATTC 59.523 38.462 21.06 0.00 39.88 2.17
2857 3574 6.340522 ACGTACGGGCAATTAACTAGTAATT 58.659 36.000 21.06 0.45 42.12 1.40
2858 3575 5.906073 ACGTACGGGCAATTAACTAGTAAT 58.094 37.500 21.06 0.00 33.58 1.89
2859 3576 5.323371 ACGTACGGGCAATTAACTAGTAA 57.677 39.130 21.06 0.00 0.00 2.24
2912 3629 4.146745 AGGTTACCCATAATCGGTGTTC 57.853 45.455 0.00 0.00 34.66 3.18
3291 4022 4.026356 AGAGAAGCTGGCACTTATTGTT 57.974 40.909 0.00 0.00 0.00 2.83
3292 4023 3.710209 AGAGAAGCTGGCACTTATTGT 57.290 42.857 0.00 0.00 0.00 2.71
3293 4024 4.260170 AGAAGAGAAGCTGGCACTTATTG 58.740 43.478 0.00 0.00 0.00 1.90
3294 4025 4.512484 GAGAAGAGAAGCTGGCACTTATT 58.488 43.478 0.00 0.45 0.00 1.40
3295 4026 3.430098 CGAGAAGAGAAGCTGGCACTTAT 60.430 47.826 0.00 0.53 0.00 1.73
3296 4027 2.094494 CGAGAAGAGAAGCTGGCACTTA 60.094 50.000 0.00 0.00 0.00 2.24
3297 4028 1.337635 CGAGAAGAGAAGCTGGCACTT 60.338 52.381 0.00 2.63 0.00 3.16
3298 4029 0.246086 CGAGAAGAGAAGCTGGCACT 59.754 55.000 0.00 0.00 0.00 4.40
3299 4030 0.244994 TCGAGAAGAGAAGCTGGCAC 59.755 55.000 0.00 0.00 0.00 5.01
3300 4031 0.244994 GTCGAGAAGAGAAGCTGGCA 59.755 55.000 0.00 0.00 0.00 4.92
3301 4032 0.459411 GGTCGAGAAGAGAAGCTGGC 60.459 60.000 0.00 0.00 0.00 4.85
3302 4033 1.181786 AGGTCGAGAAGAGAAGCTGG 58.818 55.000 0.00 0.00 0.00 4.85
3303 4034 3.243367 CCATAGGTCGAGAAGAGAAGCTG 60.243 52.174 0.00 0.00 0.00 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.