Multiple sequence alignment - TraesCS2D01G044000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G044000 chr2D 100.000 5502 0 0 1 5502 15938186 15932685 0.000000e+00 10161.0
1 TraesCS2D01G044000 chr2D 82.942 1876 298 13 2759 4621 15991513 15989647 0.000000e+00 1672.0
2 TraesCS2D01G044000 chr2D 98.058 103 2 0 1 103 56447774 56447672 4.380000e-41 180.0
3 TraesCS2D01G044000 chr2D 98.058 103 2 0 1 103 629996881 629996779 4.380000e-41 180.0
4 TraesCS2D01G044000 chr2D 97.087 103 3 0 1 103 600425802 600425700 2.040000e-39 174.0
5 TraesCS2D01G044000 chr2D 96.970 99 3 0 1 99 606599842 606599744 3.410000e-37 167.0
6 TraesCS2D01G044000 chr2D 91.667 48 4 0 801 848 648111237 648111284 3.560000e-07 67.6
7 TraesCS2D01G044000 chr2B 92.173 3245 219 15 1856 5079 28096172 28092942 0.000000e+00 4553.0
8 TraesCS2D01G044000 chr2B 81.334 1934 332 24 2759 4676 28175421 28173501 0.000000e+00 1544.0
9 TraesCS2D01G044000 chr2B 88.288 666 63 8 762 1418 28097902 28097243 0.000000e+00 784.0
10 TraesCS2D01G044000 chr2B 90.463 367 24 4 105 470 28098464 28098108 1.790000e-129 473.0
11 TraesCS2D01G044000 chr2B 82.571 459 42 16 5078 5502 28092676 28092222 2.420000e-98 370.0
12 TraesCS2D01G044000 chr2B 89.091 220 18 3 1502 1715 28097244 28097025 9.080000e-68 268.0
13 TraesCS2D01G044000 chr2B 93.064 173 11 1 4908 5079 28092930 28092758 9.150000e-63 252.0
14 TraesCS2D01G044000 chr2B 95.192 104 4 1 1 103 751179569 751179672 4.410000e-36 163.0
15 TraesCS2D01G044000 chr2B 84.615 143 22 0 1710 1852 279243209 279243351 5.750000e-30 143.0
16 TraesCS2D01G044000 chr2B 79.348 184 29 7 5295 5476 18180891 18180715 2.690000e-23 121.0
17 TraesCS2D01G044000 chr2B 88.172 93 11 0 1708 1800 160399543 160399451 1.620000e-20 111.0
18 TraesCS2D01G044000 chr2A 83.012 1813 292 11 2772 4573 17871005 17869198 0.000000e+00 1628.0
19 TraesCS2D01G044000 chr2A 86.772 378 43 5 1856 2227 699417846 699417470 1.100000e-111 414.0
20 TraesCS2D01G044000 chr2A 83.784 148 24 0 1708 1855 388461731 388461584 2.070000e-29 141.0
21 TraesCS2D01G044000 chr5D 82.767 1590 261 11 2848 4426 6822536 6820949 0.000000e+00 1406.0
22 TraesCS2D01G044000 chr5D 98.058 103 2 0 1 103 398485612 398485510 4.380000e-41 180.0
23 TraesCS2D01G044000 chr5D 78.824 170 28 8 5298 5464 133672199 133672363 2.100000e-19 108.0
24 TraesCS2D01G044000 chr5D 93.333 45 3 0 801 845 350331909 350331953 3.560000e-07 67.6
25 TraesCS2D01G044000 chr5D 90.000 50 4 1 799 848 386648880 386648832 4.600000e-06 63.9
26 TraesCS2D01G044000 chr5B 82.127 1589 273 9 2848 4426 862685 861098 0.000000e+00 1351.0
27 TraesCS2D01G044000 chr5B 84.354 147 20 3 1710 1855 688000259 688000115 2.070000e-29 141.0
28 TraesCS2D01G044000 chr5B 75.706 177 37 6 5295 5469 145026886 145027058 3.530000e-12 84.2
29 TraesCS2D01G044000 chr7A 82.860 1161 185 13 3275 4427 47511681 47512835 0.000000e+00 1029.0
30 TraesCS2D01G044000 chr7A 87.692 65 8 0 1788 1852 641807906 641807970 5.910000e-10 76.8
31 TraesCS2D01G044000 chr4B 89.697 330 29 3 1856 2180 450496115 450496444 3.070000e-112 416.0
32 TraesCS2D01G044000 chr4B 85.263 380 40 12 1856 2224 599952936 599952562 1.450000e-100 377.0
33 TraesCS2D01G044000 chr7D 84.656 378 57 1 3666 4042 45279345 45279722 5.200000e-100 375.0
34 TraesCS2D01G044000 chr7D 82.571 350 55 6 4075 4421 45279712 45280058 2.490000e-78 303.0
35 TraesCS2D01G044000 chr7D 86.364 110 14 1 1705 1813 365508460 365508569 9.680000e-23 119.0
36 TraesCS2D01G044000 chr7D 100.000 28 0 0 5152 5179 21086989 21086962 1.000000e-02 52.8
37 TraesCS2D01G044000 chr6D 98.058 103 2 0 1 103 446723436 446723334 4.380000e-41 180.0
38 TraesCS2D01G044000 chr6D 82.301 113 17 3 5318 5428 15512426 15512315 1.630000e-15 95.3
39 TraesCS2D01G044000 chr6D 97.143 35 1 0 149 183 12739484 12739450 5.950000e-05 60.2
40 TraesCS2D01G044000 chr1B 96.117 103 4 0 1 103 560245101 560244999 9.480000e-38 169.0
41 TraesCS2D01G044000 chr1B 82.609 138 16 5 5334 5469 469530188 469530057 1.250000e-21 115.0
42 TraesCS2D01G044000 chr1B 88.136 59 5 2 5328 5385 6550471 6550528 9.890000e-08 69.4
43 TraesCS2D01G044000 chr1B 93.478 46 3 0 5174 5219 662232304 662232259 9.890000e-08 69.4
44 TraesCS2D01G044000 chr4D 86.986 146 19 0 1710 1855 78935184 78935039 1.230000e-36 165.0
45 TraesCS2D01G044000 chr4D 80.952 147 25 3 1707 1852 345329156 345329300 4.500000e-21 113.0
46 TraesCS2D01G044000 chr4D 95.455 44 2 0 801 844 469582312 469582269 2.750000e-08 71.3
47 TraesCS2D01G044000 chr4A 95.146 103 5 0 1 103 586857050 586857152 4.410000e-36 163.0
48 TraesCS2D01G044000 chr5A 84.354 147 22 1 1707 1852 284772916 284772770 5.750000e-30 143.0
49 TraesCS2D01G044000 chr3B 83.465 127 19 2 1704 1829 760601965 760601840 3.480000e-22 117.0
50 TraesCS2D01G044000 chr3B 96.970 33 1 0 5149 5181 537836408 537836376 7.700000e-04 56.5
51 TraesCS2D01G044000 chr7B 95.349 43 2 0 801 843 141852256 141852298 9.890000e-08 69.4
52 TraesCS2D01G044000 chr7B 94.872 39 0 1 5167 5203 207679913 207679951 5.950000e-05 60.2
53 TraesCS2D01G044000 chr7B 100.000 31 0 0 5147 5177 162843754 162843724 2.140000e-04 58.4
54 TraesCS2D01G044000 chr7B 92.308 39 2 1 5148 5185 474461800 474461838 3.000000e-03 54.7
55 TraesCS2D01G044000 chr3D 95.349 43 2 0 801 843 400683983 400683941 9.890000e-08 69.4
56 TraesCS2D01G044000 chr1D 85.075 67 9 1 5172 5237 101583861 101583927 3.560000e-07 67.6
57 TraesCS2D01G044000 chrUn 90.000 50 5 0 796 845 86631020 86631069 1.280000e-06 65.8
58 TraesCS2D01G044000 chr3A 87.500 56 3 4 801 852 492889091 492889036 1.650000e-05 62.1
59 TraesCS2D01G044000 chr3A 97.143 35 0 1 5152 5185 669568546 669568580 2.140000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G044000 chr2D 15932685 15938186 5501 True 10161.000000 10161 100.0000 1 5502 1 chr2D.!!$R1 5501
1 TraesCS2D01G044000 chr2D 15989647 15991513 1866 True 1672.000000 1672 82.9420 2759 4621 1 chr2D.!!$R2 1862
2 TraesCS2D01G044000 chr2B 28173501 28175421 1920 True 1544.000000 1544 81.3340 2759 4676 1 chr2B.!!$R2 1917
3 TraesCS2D01G044000 chr2B 28092222 28098464 6242 True 1116.666667 4553 89.2750 105 5502 6 chr2B.!!$R4 5397
4 TraesCS2D01G044000 chr2A 17869198 17871005 1807 True 1628.000000 1628 83.0120 2772 4573 1 chr2A.!!$R1 1801
5 TraesCS2D01G044000 chr5D 6820949 6822536 1587 True 1406.000000 1406 82.7670 2848 4426 1 chr5D.!!$R1 1578
6 TraesCS2D01G044000 chr5B 861098 862685 1587 True 1351.000000 1351 82.1270 2848 4426 1 chr5B.!!$R1 1578
7 TraesCS2D01G044000 chr7A 47511681 47512835 1154 False 1029.000000 1029 82.8600 3275 4427 1 chr7A.!!$F1 1152
8 TraesCS2D01G044000 chr7D 45279345 45280058 713 False 339.000000 375 83.6135 3666 4421 2 chr7D.!!$F2 755

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
486 488 0.032952 AGCGTAACTTGGAAGTGCGA 59.967 50.0 16.17 0.00 39.66 5.10 F
1183 1192 0.107800 ACTGTCATGCCAGCTAGCTG 60.108 55.0 33.58 33.58 43.26 4.24 F
1771 2118 0.399833 TGCCACATCACTTGTAGCCA 59.600 50.0 0.00 0.00 41.64 4.75 F
2192 2921 0.609957 CCAGGCATGAGGTTTCTGCA 60.610 55.0 0.00 0.00 37.64 4.41 F
3258 4009 0.036388 GGAGCCGACCAGTTTGATCA 60.036 55.0 0.00 0.00 0.00 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1853 2200 0.111061 TGATGCAGGCAGGTTTCACT 59.889 50.0 0.00 0.0 0.00 3.41 R
2202 2931 0.260230 TGTTTGGTTGAAGGCCTGGA 59.740 50.0 5.69 0.0 0.00 3.86 R
2902 3647 0.825410 ACACCGTTGTCAGGTACACA 59.175 50.0 0.00 0.0 40.59 3.72 R
3852 4603 0.826715 CTCGGGGATCTTGAAGCTGA 59.173 55.0 0.00 0.0 0.00 4.26 R
4782 5553 0.316772 CGATAGCGTTCGGTCGTCAT 60.317 55.0 0.00 0.0 35.50 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.626081 AAGCCAGGCGAACGCTGT 62.626 61.111 18.14 4.18 41.60 4.40
20 21 2.972505 CCAGGCGAACGCTGTGTT 60.973 61.111 18.14 6.25 45.61 3.32
21 22 2.249309 CAGGCGAACGCTGTGTTG 59.751 61.111 18.14 5.39 42.09 3.33
22 23 2.108157 AGGCGAACGCTGTGTTGA 59.892 55.556 18.14 0.00 42.09 3.18
23 24 1.956170 AGGCGAACGCTGTGTTGAG 60.956 57.895 18.14 6.56 42.09 3.02
24 25 1.954146 GGCGAACGCTGTGTTGAGA 60.954 57.895 18.14 0.00 42.09 3.27
25 26 1.291877 GGCGAACGCTGTGTTGAGAT 61.292 55.000 18.14 0.00 42.09 2.75
26 27 0.512952 GCGAACGCTGTGTTGAGATT 59.487 50.000 11.86 0.00 42.09 2.40
27 28 1.462541 GCGAACGCTGTGTTGAGATTC 60.463 52.381 11.86 0.00 42.09 2.52
28 29 1.201704 CGAACGCTGTGTTGAGATTCG 60.202 52.381 11.86 3.94 42.09 3.34
29 30 1.792949 GAACGCTGTGTTGAGATTCGT 59.207 47.619 11.86 0.00 42.09 3.85
30 31 2.717580 ACGCTGTGTTGAGATTCGTA 57.282 45.000 0.00 0.00 0.00 3.43
31 32 2.325761 ACGCTGTGTTGAGATTCGTAC 58.674 47.619 0.00 0.00 0.00 3.67
32 33 1.317611 CGCTGTGTTGAGATTCGTACG 59.682 52.381 9.53 9.53 0.00 3.67
33 34 1.059264 GCTGTGTTGAGATTCGTACGC 59.941 52.381 11.24 0.00 0.00 4.42
34 35 1.654105 CTGTGTTGAGATTCGTACGCC 59.346 52.381 11.24 2.11 0.00 5.68
35 36 1.000052 TGTGTTGAGATTCGTACGCCA 60.000 47.619 11.24 0.00 0.00 5.69
36 37 1.654105 GTGTTGAGATTCGTACGCCAG 59.346 52.381 11.24 0.00 0.00 4.85
37 38 1.542472 TGTTGAGATTCGTACGCCAGA 59.458 47.619 11.24 0.00 0.00 3.86
38 39 2.165641 TGTTGAGATTCGTACGCCAGAT 59.834 45.455 11.24 1.65 0.00 2.90
39 40 2.492019 TGAGATTCGTACGCCAGATG 57.508 50.000 11.24 0.00 0.00 2.90
40 41 1.749063 TGAGATTCGTACGCCAGATGT 59.251 47.619 11.24 0.39 0.00 3.06
41 42 2.223502 TGAGATTCGTACGCCAGATGTC 60.224 50.000 11.24 10.00 0.00 3.06
42 43 1.749063 AGATTCGTACGCCAGATGTCA 59.251 47.619 11.24 0.00 0.00 3.58
43 44 2.362397 AGATTCGTACGCCAGATGTCAT 59.638 45.455 11.24 0.00 0.00 3.06
44 45 1.921243 TTCGTACGCCAGATGTCATG 58.079 50.000 11.24 0.00 0.00 3.07
45 46 0.527600 TCGTACGCCAGATGTCATGC 60.528 55.000 11.24 0.00 0.00 4.06
48 49 4.289379 CGCCAGATGTCATGCGCG 62.289 66.667 0.00 0.00 40.58 6.86
49 50 4.602696 GCCAGATGTCATGCGCGC 62.603 66.667 27.26 27.26 0.00 6.86
50 51 4.289379 CCAGATGTCATGCGCGCG 62.289 66.667 28.44 28.44 0.00 6.86
51 52 3.256833 CAGATGTCATGCGCGCGA 61.257 61.111 37.18 19.53 0.00 5.87
52 53 2.958543 AGATGTCATGCGCGCGAG 60.959 61.111 37.18 22.20 0.00 5.03
53 54 3.993234 GATGTCATGCGCGCGAGG 61.993 66.667 37.18 21.49 0.00 4.63
54 55 4.819761 ATGTCATGCGCGCGAGGT 62.820 61.111 37.18 15.64 0.00 3.85
65 66 3.692406 GCGAGGTGGTCTCCCGTT 61.692 66.667 0.00 0.00 39.30 4.44
66 67 3.057337 CGAGGTGGTCTCCCGTTT 58.943 61.111 0.00 0.00 39.30 3.60
67 68 1.374252 CGAGGTGGTCTCCCGTTTG 60.374 63.158 0.00 0.00 39.30 2.93
68 69 1.003718 GAGGTGGTCTCCCGTTTGG 60.004 63.158 0.00 0.00 36.52 3.28
69 70 2.671963 GGTGGTCTCCCGTTTGGC 60.672 66.667 0.00 0.00 0.00 4.52
70 71 2.671963 GTGGTCTCCCGTTTGGCC 60.672 66.667 0.00 0.00 0.00 5.36
71 72 2.852075 TGGTCTCCCGTTTGGCCT 60.852 61.111 3.32 0.00 0.00 5.19
72 73 2.046217 GGTCTCCCGTTTGGCCTC 60.046 66.667 3.32 0.00 0.00 4.70
73 74 2.434359 GTCTCCCGTTTGGCCTCG 60.434 66.667 3.32 6.44 0.00 4.63
74 75 2.920912 TCTCCCGTTTGGCCTCGT 60.921 61.111 3.32 0.00 0.00 4.18
75 76 2.742372 CTCCCGTTTGGCCTCGTG 60.742 66.667 3.32 0.00 0.00 4.35
79 80 4.072088 CGTTTGGCCTCGTGCGAC 62.072 66.667 3.32 0.00 42.61 5.19
80 81 3.723348 GTTTGGCCTCGTGCGACC 61.723 66.667 3.32 0.00 42.61 4.79
123 124 4.721776 TCCCTGAAGTAGCACAATTCCTAT 59.278 41.667 0.00 0.00 0.00 2.57
216 217 7.954666 TCCCTAATCCTTATTTTCCAAGTTG 57.045 36.000 0.00 0.00 0.00 3.16
225 226 7.499895 TCCTTATTTTCCAAGTTGTTAGTTCGT 59.500 33.333 1.45 0.00 0.00 3.85
226 227 8.132995 CCTTATTTTCCAAGTTGTTAGTTCGTT 58.867 33.333 1.45 0.00 0.00 3.85
236 237 7.710766 AGTTGTTAGTTCGTTCCTTTCTTAG 57.289 36.000 0.00 0.00 0.00 2.18
240 241 8.496707 TGTTAGTTCGTTCCTTTCTTAGTTTT 57.503 30.769 0.00 0.00 0.00 2.43
250 251 4.984785 CCTTTCTTAGTTTTTGCTTCTGCC 59.015 41.667 0.00 0.00 38.71 4.85
251 252 4.584327 TTCTTAGTTTTTGCTTCTGCCC 57.416 40.909 0.00 0.00 38.71 5.36
253 254 0.596082 TAGTTTTTGCTTCTGCCCGC 59.404 50.000 0.00 0.00 38.71 6.13
277 278 4.060205 TGCGTCCACCTAGAAGTAAAAAC 58.940 43.478 0.00 0.00 0.00 2.43
278 279 4.060205 GCGTCCACCTAGAAGTAAAAACA 58.940 43.478 0.00 0.00 0.00 2.83
279 280 4.151867 GCGTCCACCTAGAAGTAAAAACAG 59.848 45.833 0.00 0.00 0.00 3.16
280 281 5.535333 CGTCCACCTAGAAGTAAAAACAGA 58.465 41.667 0.00 0.00 0.00 3.41
322 324 3.064207 GTTCTCCAACGCAGACACATAA 58.936 45.455 0.00 0.00 0.00 1.90
324 326 2.002586 CTCCAACGCAGACACATAAGG 58.997 52.381 0.00 0.00 0.00 2.69
353 355 8.716674 CCATTAGGTAGACCCTACACTATTAA 57.283 38.462 6.48 0.00 45.82 1.40
380 382 4.078639 AGTACAAATCTAGGCTCCATGC 57.921 45.455 0.00 0.00 41.94 4.06
426 428 0.597568 TCTTTTGGCGGCATCACTTG 59.402 50.000 14.32 0.49 0.00 3.16
443 445 2.034558 ACTTGGCACATGCAAACTGTAC 59.965 45.455 6.15 0.00 44.36 2.90
449 451 3.421888 GCACATGCAAACTGTACTTTTCG 59.578 43.478 0.00 0.00 41.59 3.46
454 456 2.349155 GCAAACTGTACTTTTCGGTCCG 60.349 50.000 4.39 4.39 0.00 4.79
456 458 2.896745 ACTGTACTTTTCGGTCCGTT 57.103 45.000 11.88 0.00 0.00 4.44
470 472 1.133253 CCGTTGTTGCATCTGAGCG 59.867 57.895 0.00 0.00 37.31 5.03
472 474 1.067693 CGTTGTTGCATCTGAGCGTA 58.932 50.000 0.00 0.00 37.31 4.42
473 475 1.459209 CGTTGTTGCATCTGAGCGTAA 59.541 47.619 0.00 0.00 37.31 3.18
476 478 2.766313 TGTTGCATCTGAGCGTAACTT 58.234 42.857 10.55 0.00 37.31 2.66
478 480 1.725641 TGCATCTGAGCGTAACTTGG 58.274 50.000 0.00 0.00 37.31 3.61
479 481 1.275010 TGCATCTGAGCGTAACTTGGA 59.725 47.619 0.00 0.00 37.31 3.53
480 482 2.289382 TGCATCTGAGCGTAACTTGGAA 60.289 45.455 0.00 0.00 37.31 3.53
481 483 2.349886 GCATCTGAGCGTAACTTGGAAG 59.650 50.000 0.00 0.00 0.00 3.46
484 486 1.461127 CTGAGCGTAACTTGGAAGTGC 59.539 52.381 0.00 0.00 39.66 4.40
486 488 0.032952 AGCGTAACTTGGAAGTGCGA 59.967 50.000 16.17 0.00 39.66 5.10
487 489 0.438830 GCGTAACTTGGAAGTGCGAG 59.561 55.000 16.17 0.00 39.66 5.03
488 490 1.068474 CGTAACTTGGAAGTGCGAGG 58.932 55.000 9.73 0.00 39.66 4.63
490 492 2.352030 CGTAACTTGGAAGTGCGAGGTA 60.352 50.000 9.73 0.00 39.66 3.08
491 493 2.457366 AACTTGGAAGTGCGAGGTAG 57.543 50.000 0.00 0.00 39.66 3.18
492 494 1.339097 ACTTGGAAGTGCGAGGTAGT 58.661 50.000 0.00 0.00 37.98 2.73
493 495 2.522185 ACTTGGAAGTGCGAGGTAGTA 58.478 47.619 0.00 0.00 37.98 1.82
495 497 3.056749 ACTTGGAAGTGCGAGGTAGTAAG 60.057 47.826 0.00 0.00 37.98 2.34
497 499 1.471153 GGAAGTGCGAGGTAGTAAGCC 60.471 57.143 0.00 0.00 0.00 4.35
498 500 0.172803 AAGTGCGAGGTAGTAAGCCG 59.827 55.000 0.00 0.00 0.00 5.52
499 501 0.679002 AGTGCGAGGTAGTAAGCCGA 60.679 55.000 0.00 0.00 0.00 5.54
500 502 0.248539 GTGCGAGGTAGTAAGCCGAG 60.249 60.000 0.00 0.00 0.00 4.63
501 503 1.359475 GCGAGGTAGTAAGCCGAGG 59.641 63.158 0.00 0.00 0.00 4.63
502 504 1.359475 CGAGGTAGTAAGCCGAGGC 59.641 63.158 5.89 5.89 42.33 4.70
503 505 1.381928 CGAGGTAGTAAGCCGAGGCA 61.382 60.000 17.18 0.00 44.88 4.75
504 506 0.822164 GAGGTAGTAAGCCGAGGCAA 59.178 55.000 17.18 0.71 44.88 4.52
505 507 0.535797 AGGTAGTAAGCCGAGGCAAC 59.464 55.000 17.18 13.37 44.88 4.17
516 518 2.234300 CGAGGCAACGGGTAATACAT 57.766 50.000 0.00 0.00 46.39 2.29
517 519 1.864711 CGAGGCAACGGGTAATACATG 59.135 52.381 0.00 0.00 46.39 3.21
519 521 1.211949 AGGCAACGGGTAATACATGCT 59.788 47.619 0.00 0.00 46.39 3.79
520 522 1.602377 GGCAACGGGTAATACATGCTC 59.398 52.381 0.00 0.00 34.37 4.26
521 523 2.561569 GCAACGGGTAATACATGCTCT 58.438 47.619 0.00 0.00 0.00 4.09
522 524 3.493699 GGCAACGGGTAATACATGCTCTA 60.494 47.826 0.00 0.00 34.37 2.43
525 527 3.991367 ACGGGTAATACATGCTCTAAGC 58.009 45.455 0.00 0.00 42.82 3.09
536 538 0.457443 GCTCTAAGCATTGTTGGCCC 59.543 55.000 0.00 0.00 41.89 5.80
537 539 1.106285 CTCTAAGCATTGTTGGCCCC 58.894 55.000 0.00 0.00 0.00 5.80
538 540 0.704076 TCTAAGCATTGTTGGCCCCT 59.296 50.000 0.00 0.00 0.00 4.79
539 541 1.919654 TCTAAGCATTGTTGGCCCCTA 59.080 47.619 0.00 0.00 0.00 3.53
540 542 2.310349 TCTAAGCATTGTTGGCCCCTAA 59.690 45.455 0.00 0.00 0.00 2.69
541 543 1.560505 AAGCATTGTTGGCCCCTAAG 58.439 50.000 0.00 0.00 0.00 2.18
542 544 0.324645 AGCATTGTTGGCCCCTAAGG 60.325 55.000 0.00 0.00 39.47 2.69
553 555 2.841595 CCCTAAGGGCCGAGAGATT 58.158 57.895 9.80 0.00 35.35 2.40
554 556 0.394565 CCCTAAGGGCCGAGAGATTG 59.605 60.000 9.80 0.00 35.35 2.67
555 557 0.250081 CCTAAGGGCCGAGAGATTGC 60.250 60.000 9.80 0.00 0.00 3.56
556 558 0.755686 CTAAGGGCCGAGAGATTGCT 59.244 55.000 0.00 0.00 0.00 3.91
557 559 1.139853 CTAAGGGCCGAGAGATTGCTT 59.860 52.381 0.00 0.00 0.00 3.91
558 560 0.329596 AAGGGCCGAGAGATTGCTTT 59.670 50.000 0.00 0.00 0.00 3.51
559 561 1.204146 AGGGCCGAGAGATTGCTTTA 58.796 50.000 0.00 0.00 0.00 1.85
560 562 1.134371 AGGGCCGAGAGATTGCTTTAC 60.134 52.381 0.00 0.00 0.00 2.01
561 563 1.134371 GGGCCGAGAGATTGCTTTACT 60.134 52.381 0.00 0.00 0.00 2.24
562 564 2.633488 GGCCGAGAGATTGCTTTACTT 58.367 47.619 0.00 0.00 0.00 2.24
563 565 3.010420 GGCCGAGAGATTGCTTTACTTT 58.990 45.455 0.00 0.00 0.00 2.66
564 566 3.440522 GGCCGAGAGATTGCTTTACTTTT 59.559 43.478 0.00 0.00 0.00 2.27
565 567 4.406943 GCCGAGAGATTGCTTTACTTTTG 58.593 43.478 0.00 0.00 0.00 2.44
566 568 4.154195 GCCGAGAGATTGCTTTACTTTTGA 59.846 41.667 0.00 0.00 0.00 2.69
567 569 5.622378 CCGAGAGATTGCTTTACTTTTGAC 58.378 41.667 0.00 0.00 0.00 3.18
568 570 5.390991 CCGAGAGATTGCTTTACTTTTGACC 60.391 44.000 0.00 0.00 0.00 4.02
569 571 5.409826 CGAGAGATTGCTTTACTTTTGACCT 59.590 40.000 0.00 0.00 0.00 3.85
570 572 6.073003 CGAGAGATTGCTTTACTTTTGACCTT 60.073 38.462 0.00 0.00 0.00 3.50
571 573 6.974965 AGAGATTGCTTTACTTTTGACCTTG 58.025 36.000 0.00 0.00 0.00 3.61
572 574 5.532557 AGATTGCTTTACTTTTGACCTTGC 58.467 37.500 0.00 0.00 0.00 4.01
573 575 5.302823 AGATTGCTTTACTTTTGACCTTGCT 59.697 36.000 0.00 0.00 0.00 3.91
574 576 4.568152 TGCTTTACTTTTGACCTTGCTC 57.432 40.909 0.00 0.00 0.00 4.26
575 577 4.207165 TGCTTTACTTTTGACCTTGCTCT 58.793 39.130 0.00 0.00 0.00 4.09
576 578 4.036734 TGCTTTACTTTTGACCTTGCTCTG 59.963 41.667 0.00 0.00 0.00 3.35
577 579 4.275936 GCTTTACTTTTGACCTTGCTCTGA 59.724 41.667 0.00 0.00 0.00 3.27
578 580 5.561725 GCTTTACTTTTGACCTTGCTCTGAG 60.562 44.000 0.00 0.00 0.00 3.35
579 581 3.845781 ACTTTTGACCTTGCTCTGAGA 57.154 42.857 9.28 0.00 0.00 3.27
580 582 4.363991 ACTTTTGACCTTGCTCTGAGAT 57.636 40.909 9.28 0.00 0.00 2.75
582 584 4.518211 ACTTTTGACCTTGCTCTGAGATTG 59.482 41.667 9.28 0.00 0.00 2.67
583 585 2.775911 TGACCTTGCTCTGAGATTGG 57.224 50.000 9.28 8.58 0.00 3.16
585 587 2.373169 TGACCTTGCTCTGAGATTGGTT 59.627 45.455 9.28 0.00 0.00 3.67
586 588 2.746362 GACCTTGCTCTGAGATTGGTTG 59.254 50.000 9.28 0.00 0.00 3.77
587 589 2.089980 CCTTGCTCTGAGATTGGTTGG 58.910 52.381 9.28 0.00 0.00 3.77
588 590 2.089980 CTTGCTCTGAGATTGGTTGGG 58.910 52.381 9.28 0.00 0.00 4.12
589 591 1.067295 TGCTCTGAGATTGGTTGGGT 58.933 50.000 9.28 0.00 0.00 4.51
590 592 1.271543 TGCTCTGAGATTGGTTGGGTG 60.272 52.381 9.28 0.00 0.00 4.61
591 593 1.271597 GCTCTGAGATTGGTTGGGTGT 60.272 52.381 9.28 0.00 0.00 4.16
593 595 3.490348 CTCTGAGATTGGTTGGGTGTTT 58.510 45.455 0.00 0.00 0.00 2.83
595 597 3.138283 TCTGAGATTGGTTGGGTGTTTCT 59.862 43.478 0.00 0.00 0.00 2.52
596 598 3.221771 TGAGATTGGTTGGGTGTTTCTG 58.778 45.455 0.00 0.00 0.00 3.02
598 600 1.686052 GATTGGTTGGGTGTTTCTGCA 59.314 47.619 0.00 0.00 0.00 4.41
599 601 1.561643 TTGGTTGGGTGTTTCTGCAA 58.438 45.000 0.00 0.00 0.00 4.08
600 602 1.561643 TGGTTGGGTGTTTCTGCAAA 58.438 45.000 0.00 0.00 0.00 3.68
601 603 1.902508 TGGTTGGGTGTTTCTGCAAAA 59.097 42.857 0.00 0.00 0.00 2.44
639 641 6.396829 AAAAACAAGAGAGAGATTGGTTGG 57.603 37.500 0.00 0.00 36.48 3.77
640 642 3.710209 ACAAGAGAGAGATTGGTTGGG 57.290 47.619 0.00 0.00 0.00 4.12
641 643 2.982488 ACAAGAGAGAGATTGGTTGGGT 59.018 45.455 0.00 0.00 0.00 4.51
643 645 2.907892 AGAGAGAGATTGGTTGGGTGA 58.092 47.619 0.00 0.00 0.00 4.02
645 647 1.280421 AGAGAGATTGGTTGGGTGAGC 59.720 52.381 0.00 0.00 0.00 4.26
646 648 1.280421 GAGAGATTGGTTGGGTGAGCT 59.720 52.381 0.00 0.00 0.00 4.09
647 649 1.280421 AGAGATTGGTTGGGTGAGCTC 59.720 52.381 6.82 6.82 0.00 4.09
648 650 1.003580 GAGATTGGTTGGGTGAGCTCA 59.996 52.381 13.74 13.74 0.00 4.26
649 651 1.168714 GATTGGTTGGGTGAGCTCAC 58.831 55.000 34.25 34.25 45.72 3.51
661 663 2.531912 GTGAGCTCACAATGTCGTATCG 59.468 50.000 36.23 0.00 45.75 2.92
662 664 2.163613 TGAGCTCACAATGTCGTATCGT 59.836 45.455 13.74 0.00 0.00 3.73
663 665 3.375922 TGAGCTCACAATGTCGTATCGTA 59.624 43.478 13.74 0.00 0.00 3.43
664 666 4.036380 TGAGCTCACAATGTCGTATCGTAT 59.964 41.667 13.74 0.00 0.00 3.06
665 667 5.237779 TGAGCTCACAATGTCGTATCGTATA 59.762 40.000 13.74 0.00 0.00 1.47
666 668 6.072673 TGAGCTCACAATGTCGTATCGTATAT 60.073 38.462 13.74 0.00 0.00 0.86
667 669 7.118680 TGAGCTCACAATGTCGTATCGTATATA 59.881 37.037 13.74 0.00 0.00 0.86
668 670 7.986562 AGCTCACAATGTCGTATCGTATATAT 58.013 34.615 0.00 0.00 0.00 0.86
669 671 8.123575 AGCTCACAATGTCGTATCGTATATATC 58.876 37.037 0.00 0.00 0.00 1.63
670 672 8.123575 GCTCACAATGTCGTATCGTATATATCT 58.876 37.037 0.00 0.00 0.00 1.98
671 673 9.989869 CTCACAATGTCGTATCGTATATATCTT 57.010 33.333 0.00 0.00 0.00 2.40
719 721 9.561069 AGCGGTTATAATTAGAATTCATCACTT 57.439 29.630 8.44 0.00 0.00 3.16
731 733 8.503458 AGAATTCATCACTTAATCAACAGAGG 57.497 34.615 8.44 0.00 0.00 3.69
732 734 8.324306 AGAATTCATCACTTAATCAACAGAGGA 58.676 33.333 8.44 0.00 0.00 3.71
733 735 8.868522 AATTCATCACTTAATCAACAGAGGAA 57.131 30.769 0.00 0.00 31.66 3.36
734 736 8.868522 ATTCATCACTTAATCAACAGAGGAAA 57.131 30.769 0.00 0.00 31.04 3.13
735 737 8.690203 TTCATCACTTAATCAACAGAGGAAAA 57.310 30.769 0.00 0.00 0.00 2.29
736 738 8.690203 TCATCACTTAATCAACAGAGGAAAAA 57.310 30.769 0.00 0.00 0.00 1.94
737 739 9.300681 TCATCACTTAATCAACAGAGGAAAAAT 57.699 29.630 0.00 0.00 0.00 1.82
738 740 9.565213 CATCACTTAATCAACAGAGGAAAAATC 57.435 33.333 0.00 0.00 0.00 2.17
739 741 8.110860 TCACTTAATCAACAGAGGAAAAATCC 57.889 34.615 0.00 0.00 0.00 3.01
740 742 7.723616 TCACTTAATCAACAGAGGAAAAATCCA 59.276 33.333 0.00 0.00 0.00 3.41
741 743 8.526147 CACTTAATCAACAGAGGAAAAATCCAT 58.474 33.333 0.00 0.00 0.00 3.41
742 744 8.526147 ACTTAATCAACAGAGGAAAAATCCATG 58.474 33.333 0.00 0.00 0.00 3.66
743 745 6.923199 AATCAACAGAGGAAAAATCCATGT 57.077 33.333 0.00 0.00 34.71 3.21
744 746 6.923199 ATCAACAGAGGAAAAATCCATGTT 57.077 33.333 10.78 10.78 40.33 2.71
747 749 6.729690 AACAGAGGAAAAATCCATGTTGAA 57.270 33.333 14.08 0.00 39.14 2.69
748 750 6.336842 ACAGAGGAAAAATCCATGTTGAAG 57.663 37.500 0.00 0.00 30.87 3.02
749 751 5.244626 ACAGAGGAAAAATCCATGTTGAAGG 59.755 40.000 0.00 0.00 30.87 3.46
750 752 5.244626 CAGAGGAAAAATCCATGTTGAAGGT 59.755 40.000 0.00 0.00 0.00 3.50
751 753 5.244626 AGAGGAAAAATCCATGTTGAAGGTG 59.755 40.000 0.00 0.00 0.00 4.00
752 754 4.901250 AGGAAAAATCCATGTTGAAGGTGT 59.099 37.500 0.00 0.00 0.00 4.16
756 758 5.649782 AAATCCATGTTGAAGGTGTCATC 57.350 39.130 0.00 0.00 35.70 2.92
759 761 4.326826 TCCATGTTGAAGGTGTCATCTTC 58.673 43.478 17.53 17.53 40.57 2.87
760 762 4.074259 CCATGTTGAAGGTGTCATCTTCA 58.926 43.478 22.14 22.14 45.93 3.02
766 768 4.971939 TGAAGGTGTCATCTTCATGTTGA 58.028 39.130 22.14 1.20 43.70 3.18
771 773 5.413833 AGGTGTCATCTTCATGTTGATGTTC 59.586 40.000 21.01 17.15 40.46 3.18
774 776 6.148315 GTGTCATCTTCATGTTGATGTTCTGA 59.852 38.462 21.01 7.99 40.46 3.27
777 779 5.929697 TCTTCATGTTGATGTTCTGACAC 57.070 39.130 0.00 0.00 38.91 3.67
786 788 7.864686 TGTTGATGTTCTGACACTGATTTAAG 58.135 34.615 0.00 0.00 38.91 1.85
849 851 8.367943 TCTTTACAGAGCTAGTACTATCTTCG 57.632 38.462 7.65 5.11 0.00 3.79
863 865 2.010145 TCTTCGAAGCAAAGATCCCG 57.990 50.000 20.56 0.00 0.00 5.14
873 876 1.482593 CAAAGATCCCGTAGTCTGGCT 59.517 52.381 0.00 0.00 0.00 4.75
899 902 3.325425 TGGCTAGCTTATTTATACGGCCA 59.675 43.478 15.72 0.00 43.67 5.36
900 903 4.202377 TGGCTAGCTTATTTATACGGCCAA 60.202 41.667 15.72 0.00 43.07 4.52
902 905 4.753107 GCTAGCTTATTTATACGGCCAACA 59.247 41.667 7.70 0.00 0.00 3.33
909 912 7.571428 GCTTATTTATACGGCCAACATCTTCTC 60.571 40.741 2.24 0.00 0.00 2.87
944 953 4.960866 CTGCAGCTGCCCACACCA 62.961 66.667 34.64 14.22 41.18 4.17
965 974 0.674895 CACAAGCTGCCACCTACCTC 60.675 60.000 0.00 0.00 0.00 3.85
1015 1024 2.280186 GGATGGAGGCCGCTAACG 60.280 66.667 6.40 0.00 39.67 3.18
1018 1027 2.083835 GATGGAGGCCGCTAACGCTA 62.084 60.000 6.40 0.00 38.22 4.26
1044 1053 2.744243 GCAGCAGGAGGAGCAGGAT 61.744 63.158 0.00 0.00 0.00 3.24
1045 1054 1.446791 CAGCAGGAGGAGCAGGATC 59.553 63.158 0.00 0.00 0.00 3.36
1047 1056 1.145819 GCAGGAGGAGCAGGATCAC 59.854 63.158 0.00 0.00 0.00 3.06
1086 1095 2.675844 AGAGAAGACGACTGACTCATCG 59.324 50.000 18.23 8.46 43.97 3.84
1087 1096 1.740585 AGAAGACGACTGACTCATCGG 59.259 52.381 12.49 0.00 42.67 4.18
1183 1192 0.107800 ACTGTCATGCCAGCTAGCTG 60.108 55.000 33.58 33.58 43.26 4.24
1202 1211 1.347707 TGCCTCTGTTAGTGTTCCCTG 59.652 52.381 0.00 0.00 0.00 4.45
1204 1213 1.339151 CCTCTGTTAGTGTTCCCTGGC 60.339 57.143 0.00 0.00 0.00 4.85
1213 1222 1.211949 GTGTTCCCTGGCCTAATAGCA 59.788 52.381 3.32 0.00 0.00 3.49
1217 1226 0.535102 CCCTGGCCTAATAGCAACGG 60.535 60.000 3.32 0.00 0.00 4.44
1218 1227 0.468226 CCTGGCCTAATAGCAACGGA 59.532 55.000 3.32 0.00 0.00 4.69
1240 1249 5.572126 GGAACGTAGCTTACTCTAACAACTG 59.428 44.000 0.00 0.00 0.00 3.16
1255 1264 3.090037 ACAACTGTGGACGATAGCTACT 58.910 45.455 0.00 0.00 42.67 2.57
1261 1270 2.813172 GTGGACGATAGCTACTACTCCC 59.187 54.545 0.00 0.00 42.67 4.30
1265 1274 3.401182 ACGATAGCTACTACTCCCTTCG 58.599 50.000 0.00 0.37 42.67 3.79
1295 1304 8.378565 TCAAAAAGAGGACATATCTTGACTCTT 58.621 33.333 0.00 0.00 45.80 2.85
1296 1305 8.663911 CAAAAAGAGGACATATCTTGACTCTTC 58.336 37.037 0.00 0.00 44.52 2.87
1299 1308 5.888724 AGAGGACATATCTTGACTCTTCGAA 59.111 40.000 0.00 0.00 38.88 3.71
1310 1319 5.287170 TGACTCTTCGAATTCATGCTTTG 57.713 39.130 6.22 0.00 0.00 2.77
1314 1323 3.125146 TCTTCGAATTCATGCTTTGACCG 59.875 43.478 6.22 0.00 32.84 4.79
1318 1327 4.634004 TCGAATTCATGCTTTGACCGTAAT 59.366 37.500 6.22 0.00 32.84 1.89
1321 1330 6.515272 AATTCATGCTTTGACCGTAATTCT 57.485 33.333 0.00 0.00 32.84 2.40
1322 1331 4.944962 TCATGCTTTGACCGTAATTCTG 57.055 40.909 0.00 0.00 0.00 3.02
1326 1335 4.323417 TGCTTTGACCGTAATTCTGTCAT 58.677 39.130 5.71 0.00 39.34 3.06
1327 1336 5.483811 TGCTTTGACCGTAATTCTGTCATA 58.516 37.500 5.71 1.91 39.34 2.15
1328 1337 6.112734 TGCTTTGACCGTAATTCTGTCATAT 58.887 36.000 5.71 0.00 39.34 1.78
1382 1392 2.098614 TGTGAAAGTGCCTTTGAGCAA 58.901 42.857 5.10 0.00 46.19 3.91
1389 1399 2.818432 AGTGCCTTTGAGCAAGAATCTG 59.182 45.455 0.00 0.00 46.19 2.90
1404 1414 5.080969 AGAATCTGATGGTGCCAATTTTG 57.919 39.130 0.00 0.00 0.00 2.44
1412 1422 4.052159 TGGTGCCAATTTTGTGTTACAG 57.948 40.909 0.00 0.00 0.00 2.74
1415 1425 4.744631 GGTGCCAATTTTGTGTTACAGAAG 59.255 41.667 0.00 0.00 0.00 2.85
1416 1426 5.348164 GTGCCAATTTTGTGTTACAGAAGT 58.652 37.500 0.00 0.00 0.00 3.01
1417 1427 6.460399 GGTGCCAATTTTGTGTTACAGAAGTA 60.460 38.462 0.00 0.00 0.00 2.24
1418 1428 6.416750 GTGCCAATTTTGTGTTACAGAAGTAC 59.583 38.462 0.00 0.00 0.00 2.73
1419 1429 6.320164 TGCCAATTTTGTGTTACAGAAGTACT 59.680 34.615 0.00 0.00 0.00 2.73
1420 1430 6.856426 GCCAATTTTGTGTTACAGAAGTACTC 59.144 38.462 0.00 0.00 0.00 2.59
1421 1431 7.360361 CCAATTTTGTGTTACAGAAGTACTCC 58.640 38.462 0.00 0.00 0.00 3.85
1422 1432 7.360361 CAATTTTGTGTTACAGAAGTACTCCC 58.640 38.462 0.00 0.00 0.00 4.30
1423 1433 5.881923 TTTGTGTTACAGAAGTACTCCCT 57.118 39.130 0.00 0.00 0.00 4.20
1424 1434 5.464030 TTGTGTTACAGAAGTACTCCCTC 57.536 43.478 0.00 0.00 0.00 4.30
1425 1435 4.737578 TGTGTTACAGAAGTACTCCCTCT 58.262 43.478 0.00 0.00 0.00 3.69
1426 1436 4.523173 TGTGTTACAGAAGTACTCCCTCTG 59.477 45.833 17.71 17.71 34.85 3.35
1427 1437 4.523558 GTGTTACAGAAGTACTCCCTCTGT 59.476 45.833 24.77 24.77 43.14 3.41
1428 1438 5.709164 GTGTTACAGAAGTACTCCCTCTGTA 59.291 44.000 23.18 23.18 41.27 2.74
1429 1439 6.208204 GTGTTACAGAAGTACTCCCTCTGTAA 59.792 42.308 28.74 28.74 45.67 2.41
1431 1441 7.844493 TTACAGAAGTACTCCCTCTGTAAAA 57.156 36.000 29.56 19.11 45.22 1.52
1432 1442 6.742559 ACAGAAGTACTCCCTCTGTAAAAA 57.257 37.500 21.74 0.00 39.53 1.94
1464 1474 9.538508 AAGAACGTTTACATCACTAGTTTAGTT 57.461 29.630 0.46 0.00 36.76 2.24
1497 1507 9.715121 ACACTTTTATATTTGTTTACGGAGAGA 57.285 29.630 0.00 0.00 0.00 3.10
1542 1556 2.816672 TGCCAATGCACGAATTTAGACA 59.183 40.909 0.00 0.00 44.23 3.41
1568 1584 9.875691 AATCAAAATATGCCCTCTTTTTAGAAC 57.124 29.630 0.00 0.00 0.00 3.01
1569 1585 7.836842 TCAAAATATGCCCTCTTTTTAGAACC 58.163 34.615 0.00 0.00 0.00 3.62
1579 1595 5.397142 TCTTTTTAGAACCGAGGGAGTAC 57.603 43.478 0.00 0.00 0.00 2.73
1580 1596 4.834496 TCTTTTTAGAACCGAGGGAGTACA 59.166 41.667 0.00 0.00 0.00 2.90
1582 1598 1.742761 TAGAACCGAGGGAGTACACG 58.257 55.000 0.00 0.00 0.00 4.49
1589 1605 2.291741 CCGAGGGAGTACACGGTATTAC 59.708 54.545 0.00 0.00 40.42 1.89
1590 1606 2.945008 CGAGGGAGTACACGGTATTACA 59.055 50.000 0.00 0.00 0.00 2.41
1598 1614 5.594926 AGTACACGGTATTACATACAAGGC 58.405 41.667 0.00 0.00 37.48 4.35
1648 1664 5.639506 CGAACCTTGATAATGGCGATTCTAT 59.360 40.000 0.00 0.00 0.00 1.98
1657 1673 5.362556 AATGGCGATTCTATGCATTACAC 57.637 39.130 3.54 0.00 0.00 2.90
1661 1677 3.058914 GCGATTCTATGCATTACACCACC 60.059 47.826 3.54 0.00 0.00 4.61
1663 1679 4.574421 CGATTCTATGCATTACACCACCAA 59.426 41.667 3.54 0.00 0.00 3.67
1715 1731 7.624549 TGGATAGTTTCAAGAGTTTAGAGCAT 58.375 34.615 0.00 0.00 0.00 3.79
1716 1732 8.758829 TGGATAGTTTCAAGAGTTTAGAGCATA 58.241 33.333 0.00 0.00 0.00 3.14
1717 1733 9.255304 GGATAGTTTCAAGAGTTTAGAGCATAG 57.745 37.037 0.00 0.00 0.00 2.23
1738 2085 9.099454 GCATAGATAATAGTATAGCCAACAACC 57.901 37.037 0.00 0.00 0.00 3.77
1749 2096 2.294074 GCCAACAACCGGCTATATGAA 58.706 47.619 0.00 0.00 46.56 2.57
1750 2097 2.290641 GCCAACAACCGGCTATATGAAG 59.709 50.000 0.00 0.00 46.56 3.02
1751 2098 3.541632 CCAACAACCGGCTATATGAAGT 58.458 45.455 0.00 0.00 0.00 3.01
1752 2099 3.945285 CCAACAACCGGCTATATGAAGTT 59.055 43.478 0.00 0.00 0.00 2.66
1753 2100 4.201910 CCAACAACCGGCTATATGAAGTTG 60.202 45.833 0.00 0.00 40.24 3.16
1755 2102 2.256117 ACCGGCTATATGAAGTTGCC 57.744 50.000 0.00 0.00 40.14 4.52
1756 2103 1.488812 ACCGGCTATATGAAGTTGCCA 59.511 47.619 0.00 0.00 43.38 4.92
1757 2104 1.873591 CCGGCTATATGAAGTTGCCAC 59.126 52.381 0.00 0.00 43.38 5.01
1758 2105 2.560504 CGGCTATATGAAGTTGCCACA 58.439 47.619 0.00 0.00 43.38 4.17
1761 2108 4.136796 GGCTATATGAAGTTGCCACATCA 58.863 43.478 0.00 0.00 42.79 3.07
1762 2109 4.023707 GGCTATATGAAGTTGCCACATCAC 60.024 45.833 0.00 0.00 42.79 3.06
1763 2110 4.818546 GCTATATGAAGTTGCCACATCACT 59.181 41.667 0.00 0.00 33.54 3.41
1764 2111 5.297776 GCTATATGAAGTTGCCACATCACTT 59.702 40.000 0.00 0.00 33.54 3.16
1766 2113 2.653726 TGAAGTTGCCACATCACTTGT 58.346 42.857 0.00 0.00 39.91 3.16
1767 2114 3.814625 TGAAGTTGCCACATCACTTGTA 58.185 40.909 0.00 0.00 36.57 2.41
1768 2115 3.814842 TGAAGTTGCCACATCACTTGTAG 59.185 43.478 0.00 0.00 36.57 2.74
1769 2116 2.154462 AGTTGCCACATCACTTGTAGC 58.846 47.619 0.00 0.00 42.52 3.58
1770 2117 1.200020 GTTGCCACATCACTTGTAGCC 59.800 52.381 0.00 0.00 41.64 3.93
1771 2118 0.399833 TGCCACATCACTTGTAGCCA 59.600 50.000 0.00 0.00 41.64 4.75
1772 2119 1.202867 TGCCACATCACTTGTAGCCAA 60.203 47.619 0.00 0.00 41.64 4.52
1773 2120 2.094675 GCCACATCACTTGTAGCCAAT 58.905 47.619 0.00 0.00 37.03 3.16
1774 2121 2.098117 GCCACATCACTTGTAGCCAATC 59.902 50.000 0.00 0.00 37.03 2.67
1776 2123 4.769688 CCACATCACTTGTAGCCAATCTA 58.230 43.478 0.00 0.00 36.57 1.98
1777 2124 5.185454 CCACATCACTTGTAGCCAATCTAA 58.815 41.667 0.00 0.00 36.57 2.10
1778 2125 5.824624 CCACATCACTTGTAGCCAATCTAAT 59.175 40.000 0.00 0.00 36.57 1.73
1779 2126 6.992123 CCACATCACTTGTAGCCAATCTAATA 59.008 38.462 0.00 0.00 36.57 0.98
1780 2127 7.172190 CCACATCACTTGTAGCCAATCTAATAG 59.828 40.741 0.00 0.00 36.57 1.73
1781 2128 6.708054 ACATCACTTGTAGCCAATCTAATAGC 59.292 38.462 0.00 0.00 36.57 2.97
1782 2129 5.611374 TCACTTGTAGCCAATCTAATAGCC 58.389 41.667 0.00 0.00 0.00 3.93
1783 2130 5.366768 TCACTTGTAGCCAATCTAATAGCCT 59.633 40.000 0.00 0.00 0.00 4.58
1784 2131 6.553476 TCACTTGTAGCCAATCTAATAGCCTA 59.447 38.462 0.00 0.00 0.00 3.93
1785 2132 7.235606 TCACTTGTAGCCAATCTAATAGCCTAT 59.764 37.037 0.00 0.00 0.00 2.57
1786 2133 7.880195 CACTTGTAGCCAATCTAATAGCCTATT 59.120 37.037 2.01 2.01 0.00 1.73
1787 2134 8.097662 ACTTGTAGCCAATCTAATAGCCTATTC 58.902 37.037 0.00 0.00 0.00 1.75
1789 2136 8.150827 TGTAGCCAATCTAATAGCCTATTCAT 57.849 34.615 0.00 0.00 0.00 2.57
1791 2138 9.535878 GTAGCCAATCTAATAGCCTATTCATAC 57.464 37.037 0.00 0.00 0.00 2.39
1792 2139 8.150827 AGCCAATCTAATAGCCTATTCATACA 57.849 34.615 0.00 0.00 0.00 2.29
1793 2140 8.605947 AGCCAATCTAATAGCCTATTCATACAA 58.394 33.333 0.00 0.00 0.00 2.41
1844 2191 9.343539 ACCATTAATATTTAGCTCACCTCTTTC 57.656 33.333 0.00 0.00 0.00 2.62
1845 2192 9.566432 CCATTAATATTTAGCTCACCTCTTTCT 57.434 33.333 0.00 0.00 0.00 2.52
1849 2196 7.667575 ATATTTAGCTCACCTCTTTCTCTCA 57.332 36.000 0.00 0.00 0.00 3.27
1853 2200 4.348486 AGCTCACCTCTTTCTCTCACATA 58.652 43.478 0.00 0.00 0.00 2.29
1867 2595 3.005554 CTCACATAGTGAAACCTGCCTG 58.994 50.000 1.19 0.00 42.26 4.85
1874 2602 1.135199 GTGAAACCTGCCTGCATCATG 60.135 52.381 0.00 0.00 0.00 3.07
1878 2606 0.892755 ACCTGCCTGCATCATGTTTG 59.107 50.000 0.00 0.00 0.00 2.93
1883 2611 1.273048 GCCTGCATCATGTTTGGTTGA 59.727 47.619 0.00 0.00 0.00 3.18
1899 2627 3.119137 TGGTTGATGTCCTGAGTCATACG 60.119 47.826 0.00 0.00 0.00 3.06
1902 2630 3.621558 TGATGTCCTGAGTCATACGAGT 58.378 45.455 0.00 0.00 0.00 4.18
1913 2641 1.133761 TCATACGAGTCTAGCCTGGCT 60.134 52.381 26.52 26.52 43.41 4.75
1936 2664 2.608752 GCACAGCCTGACAAAAGGATTG 60.609 50.000 0.00 0.00 40.02 2.67
1975 2703 1.377333 GTGTGGTTAGCCTGAGCCC 60.377 63.158 0.00 0.00 41.25 5.19
1976 2704 1.845664 TGTGGTTAGCCTGAGCCCA 60.846 57.895 0.00 0.00 41.25 5.36
1979 2707 2.124529 GTTAGCCTGAGCCCAGCC 60.125 66.667 0.00 0.00 41.25 4.85
1981 2709 2.370445 TTAGCCTGAGCCCAGCCTC 61.370 63.158 0.00 0.00 41.25 4.70
2062 2791 6.934645 TCATAGGATTTATCGGTGTGGATTTC 59.065 38.462 0.00 0.00 0.00 2.17
2068 2797 8.076178 GGATTTATCGGTGTGGATTTCTTTATG 58.924 37.037 0.00 0.00 0.00 1.90
2078 2807 9.503427 GTGTGGATTTCTTTATGTACTAATTGC 57.497 33.333 0.00 0.00 0.00 3.56
2080 2809 9.503427 GTGGATTTCTTTATGTACTAATTGCAC 57.497 33.333 0.00 0.00 0.00 4.57
2111 2840 2.270986 CCAGGCTCAGGGCACAAAC 61.271 63.158 0.00 0.00 44.01 2.93
2129 2858 3.374220 AACCAAACACATGTGCATCAG 57.626 42.857 25.68 13.00 0.00 2.90
2131 2860 1.670674 CCAAACACATGTGCATCAGGC 60.671 52.381 25.68 0.00 45.13 4.85
2133 2862 2.488937 CAAACACATGTGCATCAGGCTA 59.511 45.455 25.68 0.00 45.15 3.93
2140 2869 0.813210 GTGCATCAGGCTAGCCTCAC 60.813 60.000 33.94 30.35 46.28 3.51
2141 2870 0.979709 TGCATCAGGCTAGCCTCACT 60.980 55.000 33.94 17.65 46.28 3.41
2169 2898 2.496899 TTCTCCAACATTCCAGGCTC 57.503 50.000 0.00 0.00 0.00 4.70
2184 2913 1.301558 GCTCGATCCAGGCATGAGG 60.302 63.158 0.00 0.00 0.00 3.86
2185 2914 2.037620 GCTCGATCCAGGCATGAGGT 62.038 60.000 0.00 0.00 0.00 3.85
2190 2919 2.295885 GATCCAGGCATGAGGTTTCTG 58.704 52.381 0.00 0.00 0.00 3.02
2192 2921 0.609957 CCAGGCATGAGGTTTCTGCA 60.610 55.000 0.00 0.00 37.64 4.41
2202 2931 1.529244 GTTTCTGCAGGCAGGGTGT 60.529 57.895 20.19 0.00 43.75 4.16
2203 2932 1.228245 TTTCTGCAGGCAGGGTGTC 60.228 57.895 20.19 0.00 43.75 3.67
2206 2935 3.914579 CTGCAGGCAGGGTGTCCAG 62.915 68.421 13.39 0.00 40.17 3.86
2233 2962 3.086282 CAACCAAACACCCCCATAGTAC 58.914 50.000 0.00 0.00 0.00 2.73
2238 2967 4.202430 CCAAACACCCCCATAGTACCTATC 60.202 50.000 0.00 0.00 0.00 2.08
2246 2975 5.247564 CCCCCATAGTACCTATCGAATTTCA 59.752 44.000 0.00 0.00 0.00 2.69
2248 2977 7.394816 CCCCATAGTACCTATCGAATTTCATT 58.605 38.462 0.00 0.00 0.00 2.57
2309 3040 7.878036 TGTTCCTAACTAAAATTTGTAGGCAC 58.122 34.615 10.52 10.55 0.00 5.01
2327 3058 5.383476 AGGCACGTACATCTACCTATACTT 58.617 41.667 0.00 0.00 0.00 2.24
2414 3145 7.293073 CACTAGTAAATAGGAGTACCAGGGTA 58.707 42.308 0.00 0.00 38.94 3.69
2436 3168 4.190772 ACAAGAAAAGTGCAATTTGGGTG 58.809 39.130 13.56 12.86 0.00 4.61
2452 3184 3.979911 TGGGTGAATTCCATGCAAGTAT 58.020 40.909 2.27 0.00 0.00 2.12
2453 3185 4.352009 TGGGTGAATTCCATGCAAGTATT 58.648 39.130 2.27 0.00 0.00 1.89
2491 3230 8.522016 GCACTGGCTTTGATATTGCATATCATG 61.522 40.741 15.19 12.89 42.80 3.07
2524 3263 8.296713 AGCGACTTGTTTATTGTTTATGTGAAT 58.703 29.630 0.00 0.00 0.00 2.57
2555 3294 1.074471 TAGTGAGGATCCCTGGCCC 60.074 63.158 8.55 0.00 31.76 5.80
2585 3324 1.223487 GTCCGCCTCCTTGCCATTA 59.777 57.895 0.00 0.00 0.00 1.90
2621 3360 4.142403 TGGACAAGCAAGTCTTTTGTTCTG 60.142 41.667 9.04 0.00 38.57 3.02
2634 3373 6.907212 GTCTTTTGTTCTGTGTAGTCATTGTG 59.093 38.462 0.00 0.00 0.00 3.33
2638 3377 3.961480 TCTGTGTAGTCATTGTGGGAG 57.039 47.619 0.00 0.00 0.00 4.30
2649 3388 2.754946 TTGTGGGAGTGGTCGATAAC 57.245 50.000 0.00 0.00 0.00 1.89
2662 3401 3.581332 GGTCGATAACCCCATGGATTAGA 59.419 47.826 15.22 3.75 42.85 2.10
2663 3402 4.225267 GGTCGATAACCCCATGGATTAGAT 59.775 45.833 15.22 0.00 42.85 1.98
2669 3408 7.334421 CGATAACCCCATGGATTAGATTTGTAG 59.666 40.741 15.22 0.00 34.81 2.74
2670 3409 5.994416 ACCCCATGGATTAGATTTGTAGT 57.006 39.130 15.22 0.00 34.81 2.73
2673 3412 4.997395 CCCATGGATTAGATTTGTAGTCCG 59.003 45.833 15.22 0.00 32.64 4.79
2706 3445 5.882557 TCTATCAACCAATTGGCTCTTCTTC 59.117 40.000 24.79 0.00 39.32 2.87
2707 3446 3.157087 TCAACCAATTGGCTCTTCTTCC 58.843 45.455 24.79 0.00 39.32 3.46
2708 3447 2.892852 CAACCAATTGGCTCTTCTTCCA 59.107 45.455 24.79 0.00 39.32 3.53
2709 3448 3.463048 ACCAATTGGCTCTTCTTCCAT 57.537 42.857 24.79 0.00 39.32 3.41
2710 3449 4.591321 ACCAATTGGCTCTTCTTCCATA 57.409 40.909 24.79 0.00 39.32 2.74
2711 3450 5.134725 ACCAATTGGCTCTTCTTCCATAT 57.865 39.130 24.79 0.00 39.32 1.78
2712 3451 6.266131 ACCAATTGGCTCTTCTTCCATATA 57.734 37.500 24.79 0.00 39.32 0.86
2715 3454 8.182513 ACCAATTGGCTCTTCTTCCATATATGG 61.183 40.741 24.79 23.77 43.72 2.74
2736 3475 4.826733 TGGTACATATTCCATGGTGCATTC 59.173 41.667 12.58 0.00 0.00 2.67
2742 3481 6.154877 ACATATTCCATGGTGCATTCAAGAAA 59.845 34.615 12.58 0.00 0.00 2.52
2767 3508 4.176120 AGTGATCCCTGGGATGAATTTC 57.824 45.455 32.43 17.92 43.27 2.17
2770 3511 5.373555 AGTGATCCCTGGGATGAATTTCATA 59.626 40.000 32.43 0.40 43.27 2.15
2800 3541 3.769844 ACTCGTGACTAATTGACCAGGAT 59.230 43.478 0.00 0.00 0.00 3.24
2881 3626 1.896220 TTGAGAAGCTTGGCACGATT 58.104 45.000 2.10 0.00 0.00 3.34
2902 3647 2.301870 TGGGACACTATCGAACTTGCTT 59.698 45.455 0.00 0.00 0.00 3.91
3097 3842 4.007644 CTCACCCTCACTGCCGCA 62.008 66.667 0.00 0.00 0.00 5.69
3129 3874 1.927527 ACCCTCCTGCCTGCATCTT 60.928 57.895 0.00 0.00 0.00 2.40
3180 3931 0.318445 CAGCTTGTTGTGCTCCTTGC 60.318 55.000 0.00 0.00 38.92 4.01
3206 3957 0.038159 CTTCTTCCTCGTTGTCGGCT 60.038 55.000 0.00 0.00 37.69 5.52
3241 3992 4.490696 TGCAACTTGGCATTCGGA 57.509 50.000 0.00 0.00 39.25 4.55
3258 4009 0.036388 GGAGCCGACCAGTTTGATCA 60.036 55.000 0.00 0.00 0.00 2.92
3301 4052 3.944015 GTGGCATCACTAGCTTCTTCAAT 59.056 43.478 0.00 0.00 40.58 2.57
3343 4094 1.227586 CGCCATGATGCTCTCTGCT 60.228 57.895 0.00 0.00 43.37 4.24
3383 4134 1.369091 GAGCGATGTCAATTGGGCGT 61.369 55.000 5.42 0.50 0.00 5.68
3418 4169 3.138798 GCAGTGCTCATGGGCCTG 61.139 66.667 23.95 23.95 35.32 4.85
3512 4263 0.532862 CACACAGGTCCTCGTTGCTT 60.533 55.000 0.00 0.00 0.00 3.91
3559 4310 0.109735 CTCGCAACACTGTCGAGCTA 60.110 55.000 7.20 0.00 40.07 3.32
3662 4413 3.299977 CCACCGAGGACGTGGTCA 61.300 66.667 0.00 0.00 41.22 4.02
4114 4871 1.052617 TACCACAGCAGCTGTTGGTA 58.947 50.000 32.12 32.12 42.59 3.25
4135 4892 2.456119 GCTGTCGGAGGCATTCACG 61.456 63.158 0.00 0.00 46.42 4.35
4407 5164 4.012895 CTGCGCACGGTGGTTCAC 62.013 66.667 5.66 0.00 0.00 3.18
4442 5199 3.792053 GACGGTGCCCATCCTAGCG 62.792 68.421 0.00 0.00 40.71 4.26
4461 5218 0.807667 GATGCCATCGAGCTTGACGT 60.808 55.000 5.59 0.00 0.00 4.34
4534 5299 8.829746 TGCATAGATTGGTAGATTAATGGAGAT 58.170 33.333 0.00 0.00 0.00 2.75
4584 5352 9.664332 CTTAGGATCCAACATGAATCCTATAAG 57.336 37.037 15.82 16.85 41.86 1.73
4595 5363 9.314133 ACATGAATCCTATAAGTCTATGCTACA 57.686 33.333 0.00 0.00 0.00 2.74
4596 5367 9.800433 CATGAATCCTATAAGTCTATGCTACAG 57.200 37.037 0.00 0.00 0.00 2.74
4623 5394 5.690464 TTTGGGAATAATCAAACATGGGG 57.310 39.130 0.00 0.00 0.00 4.96
4659 5430 3.266513 TGATGGGAGTGTGATGATGGAAA 59.733 43.478 0.00 0.00 0.00 3.13
4689 5460 1.032014 GACATGGCCGCATGGTAATT 58.968 50.000 7.89 0.00 36.91 1.40
4701 5472 3.615496 GCATGGTAATTGCAAAAGCAGAG 59.385 43.478 18.20 14.72 39.90 3.35
4706 5477 0.953727 ATTGCAAAAGCAGAGCACGA 59.046 45.000 1.71 0.00 38.11 4.35
4737 5508 6.038382 CAGAGCTCATCTTGCATGATTACTTT 59.962 38.462 17.77 3.63 35.47 2.66
4753 5524 7.919690 TGATTACTTTGATCCATCGTTGATTC 58.080 34.615 0.00 0.00 0.00 2.52
4754 5525 7.552330 TGATTACTTTGATCCATCGTTGATTCA 59.448 33.333 0.00 0.00 0.00 2.57
4755 5526 7.864108 TTACTTTGATCCATCGTTGATTCAT 57.136 32.000 0.00 0.00 0.00 2.57
4756 5527 6.369059 ACTTTGATCCATCGTTGATTCATC 57.631 37.500 0.00 0.00 0.00 2.92
4757 5528 5.882000 ACTTTGATCCATCGTTGATTCATCA 59.118 36.000 0.00 0.00 34.44 3.07
4758 5529 6.544931 ACTTTGATCCATCGTTGATTCATCAT 59.455 34.615 0.00 0.00 36.56 2.45
4759 5530 6.947644 TTGATCCATCGTTGATTCATCATT 57.052 33.333 0.00 0.00 36.56 2.57
4795 5566 1.415374 AGTTCAATGACGACCGAACG 58.585 50.000 0.00 0.00 42.01 3.95
4809 5580 1.663445 CCGAACGCTATCGATCTGACC 60.663 57.143 0.00 0.00 45.48 4.02
4821 5592 1.881324 GATCTGACCCTACGTCTAGGC 59.119 57.143 0.00 0.00 42.49 3.93
4853 5624 2.890474 CGCTACACCCACATCGCC 60.890 66.667 0.00 0.00 0.00 5.54
4857 5628 2.178876 CTACACCCACATCGCCCACA 62.179 60.000 0.00 0.00 0.00 4.17
4860 5631 1.095228 CACCCACATCGCCCACATAC 61.095 60.000 0.00 0.00 0.00 2.39
4866 5637 1.227263 ATCGCCCACATACGACAGC 60.227 57.895 0.00 0.00 41.76 4.40
4874 5645 2.604855 CCACATACGACAGCCGATCTAC 60.605 54.545 0.00 0.00 41.76 2.59
4906 5677 6.338146 CCAACCTACTCGTCAAATTCATCTA 58.662 40.000 0.00 0.00 0.00 1.98
4993 5765 1.281419 TGCCGTCCTCCCAAAGATTA 58.719 50.000 0.00 0.00 0.00 1.75
5003 5959 1.676006 CCCAAAGATTATCACGTGGCC 59.324 52.381 17.00 0.00 0.00 5.36
5027 5983 4.272489 TGGTCATGAGGCCTTAATTCTTG 58.728 43.478 6.77 2.34 0.00 3.02
5055 6011 6.959311 GTGTGCTAGATAATTTGTTGTAACGG 59.041 38.462 0.00 0.00 0.00 4.44
5056 6012 6.874664 TGTGCTAGATAATTTGTTGTAACGGA 59.125 34.615 0.00 0.00 0.00 4.69
5150 6189 9.030301 TGTATATCAAATATTGTCTGTGTGTCG 57.970 33.333 0.00 0.00 0.00 4.35
5162 6201 1.540267 TGTGTGTCGGCTTAGTCTCTC 59.460 52.381 0.00 0.00 0.00 3.20
5166 6205 2.097791 GTGTCGGCTTAGTCTCTCGAAT 59.902 50.000 0.00 0.00 0.00 3.34
5176 6215 4.566545 AGTCTCTCGAATGTGCTCATAG 57.433 45.455 0.93 0.13 33.49 2.23
5177 6216 3.317711 AGTCTCTCGAATGTGCTCATAGG 59.682 47.826 0.93 0.00 33.49 2.57
5181 6220 1.138859 TCGAATGTGCTCATAGGGGTG 59.861 52.381 0.93 0.00 33.49 4.61
5188 6256 4.752063 TGTGCTCATAGGGGTGAGTATAT 58.248 43.478 5.87 0.00 45.80 0.86
5189 6257 4.528206 TGTGCTCATAGGGGTGAGTATATG 59.472 45.833 5.87 0.00 45.80 1.78
5211 6279 6.607735 TGTGCATATGTATGAACATCTGTG 57.392 37.500 9.31 0.00 45.05 3.66
5230 6298 5.924254 TCTGTGTCTATACGGTGTTCAAAAG 59.076 40.000 0.00 0.00 0.00 2.27
5239 6307 4.689071 ACGGTGTTCAAAAGAAAAATCCC 58.311 39.130 0.00 0.00 0.00 3.85
5253 6321 0.611714 AATCCCGCCCGTGATATACC 59.388 55.000 0.00 0.00 0.00 2.73
5259 6327 2.618816 CCGCCCGTGATATACCTACCTA 60.619 54.545 0.00 0.00 0.00 3.08
5260 6328 3.084039 CGCCCGTGATATACCTACCTAA 58.916 50.000 0.00 0.00 0.00 2.69
5261 6329 3.698040 CGCCCGTGATATACCTACCTAAT 59.302 47.826 0.00 0.00 0.00 1.73
5262 6330 4.883585 CGCCCGTGATATACCTACCTAATA 59.116 45.833 0.00 0.00 0.00 0.98
5326 6398 9.146984 TGGTACTCATTTATCGACTTACAAAAG 57.853 33.333 0.00 0.00 38.77 2.27
5437 6510 2.201732 GACGAGCACTTCACTTGACAA 58.798 47.619 0.00 0.00 0.00 3.18
5439 6512 2.159099 ACGAGCACTTCACTTGACAAGA 60.159 45.455 21.95 0.00 0.00 3.02
5451 6524 6.842163 TCACTTGACAAGAAAAGAAACACTC 58.158 36.000 21.95 0.00 0.00 3.51
5453 6526 7.822334 TCACTTGACAAGAAAAGAAACACTCTA 59.178 33.333 21.95 0.00 32.46 2.43
5499 6572 7.880195 AGATTACATAGTCTATCATGTTTGGCC 59.120 37.037 0.00 0.00 36.74 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.626081 ACAGCGTTCGCCTGGCTT 62.626 61.111 17.92 0.00 34.13 4.35
3 4 2.972505 AACACAGCGTTCGCCTGG 60.973 61.111 13.54 6.57 29.27 4.45
4 5 2.162921 CTCAACACAGCGTTCGCCTG 62.163 60.000 13.54 12.80 34.86 4.85
6 7 1.291877 ATCTCAACACAGCGTTCGCC 61.292 55.000 13.54 0.00 34.86 5.54
7 8 0.512952 AATCTCAACACAGCGTTCGC 59.487 50.000 9.24 9.24 34.86 4.70
8 9 1.201704 CGAATCTCAACACAGCGTTCG 60.202 52.381 0.00 0.00 34.86 3.95
9 10 1.792949 ACGAATCTCAACACAGCGTTC 59.207 47.619 0.00 0.00 34.86 3.95
10 11 1.865865 ACGAATCTCAACACAGCGTT 58.134 45.000 0.00 0.00 38.83 4.84
11 12 2.325761 GTACGAATCTCAACACAGCGT 58.674 47.619 0.00 0.00 0.00 5.07
12 13 1.317611 CGTACGAATCTCAACACAGCG 59.682 52.381 10.44 0.00 0.00 5.18
13 14 1.059264 GCGTACGAATCTCAACACAGC 59.941 52.381 21.65 0.00 0.00 4.40
14 15 1.654105 GGCGTACGAATCTCAACACAG 59.346 52.381 21.65 0.00 0.00 3.66
15 16 1.000052 TGGCGTACGAATCTCAACACA 60.000 47.619 21.65 0.00 0.00 3.72
16 17 1.654105 CTGGCGTACGAATCTCAACAC 59.346 52.381 21.65 0.00 0.00 3.32
17 18 1.542472 TCTGGCGTACGAATCTCAACA 59.458 47.619 21.65 3.14 0.00 3.33
18 19 2.273370 TCTGGCGTACGAATCTCAAC 57.727 50.000 21.65 0.00 0.00 3.18
19 20 2.165641 ACATCTGGCGTACGAATCTCAA 59.834 45.455 21.65 0.00 0.00 3.02
20 21 1.749063 ACATCTGGCGTACGAATCTCA 59.251 47.619 21.65 7.41 0.00 3.27
21 22 2.223502 TGACATCTGGCGTACGAATCTC 60.224 50.000 21.65 0.00 0.00 2.75
22 23 1.749063 TGACATCTGGCGTACGAATCT 59.251 47.619 21.65 0.00 0.00 2.40
23 24 2.203800 TGACATCTGGCGTACGAATC 57.796 50.000 21.65 8.08 0.00 2.52
24 25 2.473816 CATGACATCTGGCGTACGAAT 58.526 47.619 21.65 3.20 0.00 3.34
25 26 1.921243 CATGACATCTGGCGTACGAA 58.079 50.000 21.65 5.07 0.00 3.85
26 27 0.527600 GCATGACATCTGGCGTACGA 60.528 55.000 21.65 0.00 0.00 3.43
27 28 1.811217 CGCATGACATCTGGCGTACG 61.811 60.000 11.84 11.84 44.11 3.67
28 29 1.927210 CGCATGACATCTGGCGTAC 59.073 57.895 9.75 0.00 44.11 3.67
29 30 4.418337 CGCATGACATCTGGCGTA 57.582 55.556 9.75 0.00 44.11 4.42
32 33 4.602696 GCGCGCATGACATCTGGC 62.603 66.667 29.10 0.00 0.00 4.85
33 34 4.289379 CGCGCGCATGACATCTGG 62.289 66.667 32.61 6.38 0.00 3.86
34 35 3.206547 CTCGCGCGCATGACATCTG 62.207 63.158 32.61 11.41 0.00 2.90
35 36 2.958543 CTCGCGCGCATGACATCT 60.959 61.111 32.61 0.00 0.00 2.90
36 37 3.993234 CCTCGCGCGCATGACATC 61.993 66.667 32.61 0.00 0.00 3.06
37 38 4.819761 ACCTCGCGCGCATGACAT 62.820 61.111 32.61 7.90 0.00 3.06
56 57 2.434359 CGAGGCCAAACGGGAGAC 60.434 66.667 5.01 0.00 40.01 3.36
57 58 2.920912 ACGAGGCCAAACGGGAGA 60.921 61.111 18.10 0.00 40.01 3.71
58 59 2.742372 CACGAGGCCAAACGGGAG 60.742 66.667 18.10 6.87 40.01 4.30
62 63 4.072088 GTCGCACGAGGCCAAACG 62.072 66.667 5.01 10.64 40.31 3.60
63 64 3.723348 GGTCGCACGAGGCCAAAC 61.723 66.667 5.01 0.00 40.31 2.93
96 97 5.010617 GGAATTGTGCTACTTCAGGGAAAAA 59.989 40.000 0.00 0.00 0.00 1.94
97 98 4.522789 GGAATTGTGCTACTTCAGGGAAAA 59.477 41.667 0.00 0.00 0.00 2.29
98 99 4.079253 GGAATTGTGCTACTTCAGGGAAA 58.921 43.478 0.00 0.00 0.00 3.13
99 100 3.330701 AGGAATTGTGCTACTTCAGGGAA 59.669 43.478 0.00 0.00 0.00 3.97
100 101 2.912956 AGGAATTGTGCTACTTCAGGGA 59.087 45.455 0.00 0.00 0.00 4.20
101 102 3.356529 AGGAATTGTGCTACTTCAGGG 57.643 47.619 0.00 0.00 0.00 4.45
102 103 8.682936 AATAATAGGAATTGTGCTACTTCAGG 57.317 34.615 0.00 0.00 29.41 3.86
123 124 7.973388 CCCGCTTTCAACTTAATGATGAAATAA 59.027 33.333 9.52 0.00 43.30 1.40
190 191 8.633561 CAACTTGGAAAATAAGGATTAGGGATC 58.366 37.037 0.00 0.00 31.76 3.36
216 217 9.218359 CAAAAACTAAGAAAGGAACGAACTAAC 57.782 33.333 0.00 0.00 0.00 2.34
225 226 6.273071 GCAGAAGCAAAAACTAAGAAAGGAA 58.727 36.000 0.00 0.00 41.58 3.36
226 227 5.221244 GGCAGAAGCAAAAACTAAGAAAGGA 60.221 40.000 0.00 0.00 44.61 3.36
236 237 1.067250 TGCGGGCAGAAGCAAAAAC 59.933 52.632 0.00 0.00 44.61 2.43
250 251 2.572095 TTCTAGGTGGACGCATGCGG 62.572 60.000 39.95 23.77 44.69 5.69
251 252 1.148157 CTTCTAGGTGGACGCATGCG 61.148 60.000 36.79 36.79 46.03 4.73
253 254 3.520290 TTACTTCTAGGTGGACGCATG 57.480 47.619 0.00 0.00 0.00 4.06
352 354 9.700831 ATGGAGCCTAGATTTGTACTTAAAATT 57.299 29.630 0.00 0.00 0.00 1.82
353 355 9.125026 CATGGAGCCTAGATTTGTACTTAAAAT 57.875 33.333 0.00 0.00 0.00 1.82
376 378 4.280819 TCAGGGGAGAAAATTAAGGCATG 58.719 43.478 0.00 0.00 0.00 4.06
380 382 5.595952 CAGGAATCAGGGGAGAAAATTAAGG 59.404 44.000 0.00 0.00 0.00 2.69
419 421 1.965643 AGTTTGCATGTGCCAAGTGAT 59.034 42.857 2.07 0.00 41.18 3.06
426 428 3.369546 AAAGTACAGTTTGCATGTGCC 57.630 42.857 2.07 0.00 41.18 5.01
432 434 2.614983 GGACCGAAAAGTACAGTTTGCA 59.385 45.455 0.00 0.00 0.00 4.08
443 445 0.378962 TGCAACAACGGACCGAAAAG 59.621 50.000 23.38 9.36 0.00 2.27
449 451 0.798776 CTCAGATGCAACAACGGACC 59.201 55.000 0.00 0.00 0.00 4.46
454 456 2.480419 AGTTACGCTCAGATGCAACAAC 59.520 45.455 0.00 0.00 0.00 3.32
456 458 2.455674 AGTTACGCTCAGATGCAACA 57.544 45.000 0.00 0.00 0.00 3.33
470 472 2.165319 ACCTCGCACTTCCAAGTTAC 57.835 50.000 0.00 0.00 37.08 2.50
472 474 1.692519 ACTACCTCGCACTTCCAAGTT 59.307 47.619 0.00 0.00 37.08 2.66
473 475 1.339097 ACTACCTCGCACTTCCAAGT 58.661 50.000 0.00 0.00 40.60 3.16
476 478 1.203994 GCTTACTACCTCGCACTTCCA 59.796 52.381 0.00 0.00 0.00 3.53
478 480 1.798079 CGGCTTACTACCTCGCACTTC 60.798 57.143 0.00 0.00 0.00 3.01
479 481 0.172803 CGGCTTACTACCTCGCACTT 59.827 55.000 0.00 0.00 0.00 3.16
480 482 0.679002 TCGGCTTACTACCTCGCACT 60.679 55.000 0.00 0.00 0.00 4.40
481 483 0.248539 CTCGGCTTACTACCTCGCAC 60.249 60.000 0.00 0.00 0.00 5.34
484 486 1.359475 GCCTCGGCTTACTACCTCG 59.641 63.158 0.00 0.00 38.26 4.63
486 488 0.535797 GTTGCCTCGGCTTACTACCT 59.464 55.000 9.65 0.00 42.51 3.08
487 489 0.804933 CGTTGCCTCGGCTTACTACC 60.805 60.000 9.65 0.00 42.51 3.18
488 490 0.804933 CCGTTGCCTCGGCTTACTAC 60.805 60.000 9.65 0.00 43.96 2.73
490 492 2.264794 CCGTTGCCTCGGCTTACT 59.735 61.111 9.65 0.00 43.96 2.24
497 499 1.864711 CATGTATTACCCGTTGCCTCG 59.135 52.381 0.00 0.00 0.00 4.63
498 500 1.602377 GCATGTATTACCCGTTGCCTC 59.398 52.381 0.00 0.00 0.00 4.70
499 501 1.211949 AGCATGTATTACCCGTTGCCT 59.788 47.619 0.00 0.00 0.00 4.75
500 502 1.602377 GAGCATGTATTACCCGTTGCC 59.398 52.381 0.00 0.00 0.00 4.52
501 503 2.561569 AGAGCATGTATTACCCGTTGC 58.438 47.619 0.00 0.00 0.00 4.17
502 504 4.211374 GCTTAGAGCATGTATTACCCGTTG 59.789 45.833 0.00 0.00 41.89 4.10
503 505 4.377897 GCTTAGAGCATGTATTACCCGTT 58.622 43.478 0.00 0.00 41.89 4.44
504 506 3.991367 GCTTAGAGCATGTATTACCCGT 58.009 45.455 0.00 0.00 41.89 5.28
517 519 0.457443 GGGCCAACAATGCTTAGAGC 59.543 55.000 4.39 0.00 42.82 4.09
519 521 0.704076 AGGGGCCAACAATGCTTAGA 59.296 50.000 4.39 0.00 0.00 2.10
520 522 2.435372 TAGGGGCCAACAATGCTTAG 57.565 50.000 4.39 0.00 0.00 2.18
521 523 2.622977 CCTTAGGGGCCAACAATGCTTA 60.623 50.000 4.39 0.00 0.00 3.09
522 524 1.560505 CTTAGGGGCCAACAATGCTT 58.439 50.000 4.39 0.00 0.00 3.91
536 538 0.250081 GCAATCTCTCGGCCCTTAGG 60.250 60.000 0.00 0.00 0.00 2.69
537 539 0.755686 AGCAATCTCTCGGCCCTTAG 59.244 55.000 0.00 0.00 0.00 2.18
538 540 1.204146 AAGCAATCTCTCGGCCCTTA 58.796 50.000 0.00 0.00 0.00 2.69
539 541 0.329596 AAAGCAATCTCTCGGCCCTT 59.670 50.000 0.00 0.00 0.00 3.95
540 542 1.134371 GTAAAGCAATCTCTCGGCCCT 60.134 52.381 0.00 0.00 0.00 5.19
541 543 1.134371 AGTAAAGCAATCTCTCGGCCC 60.134 52.381 0.00 0.00 0.00 5.80
542 544 2.317530 AGTAAAGCAATCTCTCGGCC 57.682 50.000 0.00 0.00 0.00 6.13
543 545 4.154195 TCAAAAGTAAAGCAATCTCTCGGC 59.846 41.667 0.00 0.00 0.00 5.54
545 547 5.409826 AGGTCAAAAGTAAAGCAATCTCTCG 59.590 40.000 0.00 0.00 0.00 4.04
546 548 6.809630 AGGTCAAAAGTAAAGCAATCTCTC 57.190 37.500 0.00 0.00 0.00 3.20
547 549 6.515696 GCAAGGTCAAAAGTAAAGCAATCTCT 60.516 38.462 0.00 0.00 0.00 3.10
548 550 5.631096 GCAAGGTCAAAAGTAAAGCAATCTC 59.369 40.000 0.00 0.00 0.00 2.75
549 551 5.302823 AGCAAGGTCAAAAGTAAAGCAATCT 59.697 36.000 0.00 0.00 0.00 2.40
550 552 5.532557 AGCAAGGTCAAAAGTAAAGCAATC 58.467 37.500 0.00 0.00 0.00 2.67
551 553 5.302823 AGAGCAAGGTCAAAAGTAAAGCAAT 59.697 36.000 1.84 0.00 0.00 3.56
553 555 4.036734 CAGAGCAAGGTCAAAAGTAAAGCA 59.963 41.667 1.84 0.00 0.00 3.91
554 556 4.275936 TCAGAGCAAGGTCAAAAGTAAAGC 59.724 41.667 1.84 0.00 0.00 3.51
555 557 5.760253 TCTCAGAGCAAGGTCAAAAGTAAAG 59.240 40.000 1.84 0.00 0.00 1.85
556 558 5.680619 TCTCAGAGCAAGGTCAAAAGTAAA 58.319 37.500 1.84 0.00 0.00 2.01
557 559 5.290493 TCTCAGAGCAAGGTCAAAAGTAA 57.710 39.130 1.84 0.00 0.00 2.24
558 560 4.955811 TCTCAGAGCAAGGTCAAAAGTA 57.044 40.909 1.84 0.00 0.00 2.24
559 561 3.845781 TCTCAGAGCAAGGTCAAAAGT 57.154 42.857 1.84 0.00 0.00 2.66
560 562 4.082895 CCAATCTCAGAGCAAGGTCAAAAG 60.083 45.833 1.84 0.00 0.00 2.27
561 563 3.822735 CCAATCTCAGAGCAAGGTCAAAA 59.177 43.478 1.84 0.00 0.00 2.44
562 564 3.181440 ACCAATCTCAGAGCAAGGTCAAA 60.181 43.478 1.84 0.00 0.00 2.69
563 565 2.373169 ACCAATCTCAGAGCAAGGTCAA 59.627 45.455 1.84 0.00 0.00 3.18
564 566 1.980765 ACCAATCTCAGAGCAAGGTCA 59.019 47.619 1.84 0.00 0.00 4.02
565 567 2.746362 CAACCAATCTCAGAGCAAGGTC 59.254 50.000 7.66 0.00 0.00 3.85
566 568 2.553904 CCAACCAATCTCAGAGCAAGGT 60.554 50.000 0.00 0.00 0.00 3.50
567 569 2.089980 CCAACCAATCTCAGAGCAAGG 58.910 52.381 0.00 0.00 0.00 3.61
568 570 2.089980 CCCAACCAATCTCAGAGCAAG 58.910 52.381 0.00 0.00 0.00 4.01
569 571 1.425066 ACCCAACCAATCTCAGAGCAA 59.575 47.619 0.00 0.00 0.00 3.91
570 572 1.067295 ACCCAACCAATCTCAGAGCA 58.933 50.000 0.00 0.00 0.00 4.26
571 573 1.271597 ACACCCAACCAATCTCAGAGC 60.272 52.381 0.00 0.00 0.00 4.09
572 574 2.867109 ACACCCAACCAATCTCAGAG 57.133 50.000 0.00 0.00 0.00 3.35
573 575 3.138283 AGAAACACCCAACCAATCTCAGA 59.862 43.478 0.00 0.00 0.00 3.27
574 576 3.254166 CAGAAACACCCAACCAATCTCAG 59.746 47.826 0.00 0.00 0.00 3.35
575 577 3.221771 CAGAAACACCCAACCAATCTCA 58.778 45.455 0.00 0.00 0.00 3.27
576 578 2.029918 GCAGAAACACCCAACCAATCTC 60.030 50.000 0.00 0.00 0.00 2.75
577 579 1.963515 GCAGAAACACCCAACCAATCT 59.036 47.619 0.00 0.00 0.00 2.40
578 580 1.686052 TGCAGAAACACCCAACCAATC 59.314 47.619 0.00 0.00 0.00 2.67
579 581 1.786937 TGCAGAAACACCCAACCAAT 58.213 45.000 0.00 0.00 0.00 3.16
580 582 1.561643 TTGCAGAAACACCCAACCAA 58.438 45.000 0.00 0.00 0.00 3.67
582 584 2.682155 TTTTGCAGAAACACCCAACC 57.318 45.000 0.00 0.00 0.00 3.77
617 619 4.829492 CCCAACCAATCTCTCTCTTGTTTT 59.171 41.667 0.00 0.00 0.00 2.43
618 620 4.141158 ACCCAACCAATCTCTCTCTTGTTT 60.141 41.667 0.00 0.00 0.00 2.83
619 621 3.395941 ACCCAACCAATCTCTCTCTTGTT 59.604 43.478 0.00 0.00 0.00 2.83
621 623 3.008375 TCACCCAACCAATCTCTCTCTTG 59.992 47.826 0.00 0.00 0.00 3.02
622 624 3.251484 TCACCCAACCAATCTCTCTCTT 58.749 45.455 0.00 0.00 0.00 2.85
623 625 2.836981 CTCACCCAACCAATCTCTCTCT 59.163 50.000 0.00 0.00 0.00 3.10
626 628 1.280421 AGCTCACCCAACCAATCTCTC 59.720 52.381 0.00 0.00 0.00 3.20
627 629 1.280421 GAGCTCACCCAACCAATCTCT 59.720 52.381 9.40 0.00 0.00 3.10
628 630 1.003580 TGAGCTCACCCAACCAATCTC 59.996 52.381 13.74 0.00 0.00 2.75
629 631 1.067295 TGAGCTCACCCAACCAATCT 58.933 50.000 13.74 0.00 0.00 2.40
632 634 0.257328 TTGTGAGCTCACCCAACCAA 59.743 50.000 37.23 23.73 45.88 3.67
633 635 0.478072 ATTGTGAGCTCACCCAACCA 59.522 50.000 37.23 19.59 45.88 3.67
634 636 0.883833 CATTGTGAGCTCACCCAACC 59.116 55.000 37.23 17.26 45.88 3.77
635 637 1.537202 GACATTGTGAGCTCACCCAAC 59.463 52.381 37.23 22.78 45.88 3.77
637 639 0.320683 CGACATTGTGAGCTCACCCA 60.321 55.000 37.23 26.61 45.88 4.51
638 640 0.320771 ACGACATTGTGAGCTCACCC 60.321 55.000 37.23 19.38 45.88 4.61
639 641 2.363788 TACGACATTGTGAGCTCACC 57.636 50.000 37.23 23.18 45.88 4.02
640 642 2.531912 CGATACGACATTGTGAGCTCAC 59.468 50.000 35.04 35.04 46.59 3.51
641 643 2.163613 ACGATACGACATTGTGAGCTCA 59.836 45.455 13.74 13.74 0.00 4.26
643 645 2.941453 ACGATACGACATTGTGAGCT 57.059 45.000 0.00 0.00 0.00 4.09
645 647 9.989869 AAGATATATACGATACGACATTGTGAG 57.010 33.333 0.00 0.00 0.00 3.51
693 695 9.561069 AAGTGATGAATTCTAATTATAACCGCT 57.439 29.630 7.05 0.00 0.00 5.52
705 707 9.605275 CCTCTGTTGATTAAGTGATGAATTCTA 57.395 33.333 7.05 0.00 0.00 2.10
706 708 8.324306 TCCTCTGTTGATTAAGTGATGAATTCT 58.676 33.333 7.05 0.00 0.00 2.40
707 709 8.498054 TCCTCTGTTGATTAAGTGATGAATTC 57.502 34.615 0.00 0.00 0.00 2.17
708 710 8.868522 TTCCTCTGTTGATTAAGTGATGAATT 57.131 30.769 0.00 0.00 0.00 2.17
709 711 8.868522 TTTCCTCTGTTGATTAAGTGATGAAT 57.131 30.769 0.00 0.00 0.00 2.57
710 712 8.690203 TTTTCCTCTGTTGATTAAGTGATGAA 57.310 30.769 0.00 0.00 0.00 2.57
711 713 8.690203 TTTTTCCTCTGTTGATTAAGTGATGA 57.310 30.769 0.00 0.00 0.00 2.92
712 714 9.565213 GATTTTTCCTCTGTTGATTAAGTGATG 57.435 33.333 0.00 0.00 0.00 3.07
713 715 8.743714 GGATTTTTCCTCTGTTGATTAAGTGAT 58.256 33.333 0.00 0.00 0.00 3.06
714 716 7.723616 TGGATTTTTCCTCTGTTGATTAAGTGA 59.276 33.333 0.00 0.00 0.00 3.41
715 717 7.885297 TGGATTTTTCCTCTGTTGATTAAGTG 58.115 34.615 0.00 0.00 0.00 3.16
716 718 8.526147 CATGGATTTTTCCTCTGTTGATTAAGT 58.474 33.333 0.00 0.00 0.00 2.24
717 719 8.526147 ACATGGATTTTTCCTCTGTTGATTAAG 58.474 33.333 0.00 0.00 0.00 1.85
718 720 8.421249 ACATGGATTTTTCCTCTGTTGATTAA 57.579 30.769 0.00 0.00 0.00 1.40
719 721 8.306038 CAACATGGATTTTTCCTCTGTTGATTA 58.694 33.333 22.62 0.00 45.73 1.75
720 722 6.923199 ACATGGATTTTTCCTCTGTTGATT 57.077 33.333 0.00 0.00 0.00 2.57
721 723 6.494491 TCAACATGGATTTTTCCTCTGTTGAT 59.506 34.615 24.11 3.94 46.00 2.57
722 724 6.088016 CAACATGGATTTTTCCTCTGTTGA 57.912 37.500 22.62 0.00 45.73 3.18
723 725 6.088016 TCAACATGGATTTTTCCTCTGTTG 57.912 37.500 21.84 21.84 45.09 3.33
724 726 6.239402 CCTTCAACATGGATTTTTCCTCTGTT 60.239 38.462 0.00 7.35 37.06 3.16
725 727 5.244626 CCTTCAACATGGATTTTTCCTCTGT 59.755 40.000 0.00 0.00 0.00 3.41
726 728 5.244626 ACCTTCAACATGGATTTTTCCTCTG 59.755 40.000 0.00 0.00 0.00 3.35
727 729 5.244626 CACCTTCAACATGGATTTTTCCTCT 59.755 40.000 0.00 0.00 0.00 3.69
728 730 5.011023 ACACCTTCAACATGGATTTTTCCTC 59.989 40.000 0.00 0.00 0.00 3.71
729 731 4.901250 ACACCTTCAACATGGATTTTTCCT 59.099 37.500 0.00 0.00 0.00 3.36
730 732 5.213891 ACACCTTCAACATGGATTTTTCC 57.786 39.130 0.00 0.00 0.00 3.13
731 733 5.841810 TGACACCTTCAACATGGATTTTTC 58.158 37.500 0.00 0.00 0.00 2.29
732 734 5.867903 TGACACCTTCAACATGGATTTTT 57.132 34.783 0.00 0.00 0.00 1.94
733 735 5.776716 AGATGACACCTTCAACATGGATTTT 59.223 36.000 0.00 0.00 37.92 1.82
734 736 5.327732 AGATGACACCTTCAACATGGATTT 58.672 37.500 0.00 0.00 37.92 2.17
735 737 4.927049 AGATGACACCTTCAACATGGATT 58.073 39.130 0.00 0.00 37.92 3.01
736 738 4.581309 AGATGACACCTTCAACATGGAT 57.419 40.909 0.00 0.00 37.92 3.41
737 739 4.202451 TGAAGATGACACCTTCAACATGGA 60.202 41.667 9.98 0.00 44.74 3.41
738 740 4.074259 TGAAGATGACACCTTCAACATGG 58.926 43.478 9.98 0.00 44.74 3.66
745 747 5.413833 ACATCAACATGAAGATGACACCTTC 59.586 40.000 26.97 2.22 43.28 3.46
746 748 5.319453 ACATCAACATGAAGATGACACCTT 58.681 37.500 26.97 10.20 43.28 3.50
747 749 4.914983 ACATCAACATGAAGATGACACCT 58.085 39.130 26.97 10.71 43.28 4.00
748 750 5.413833 AGAACATCAACATGAAGATGACACC 59.586 40.000 26.97 16.64 43.28 4.16
749 751 6.148315 TCAGAACATCAACATGAAGATGACAC 59.852 38.462 26.97 19.30 43.28 3.67
750 752 6.148315 GTCAGAACATCAACATGAAGATGACA 59.852 38.462 26.97 11.15 43.28 3.58
751 753 6.148315 TGTCAGAACATCAACATGAAGATGAC 59.852 38.462 26.97 21.09 43.28 3.06
752 754 6.148315 GTGTCAGAACATCAACATGAAGATGA 59.852 38.462 26.97 14.89 43.28 2.92
756 758 5.467735 TCAGTGTCAGAACATCAACATGAAG 59.532 40.000 0.00 0.00 37.81 3.02
759 761 5.874895 ATCAGTGTCAGAACATCAACATG 57.125 39.130 0.00 0.00 37.81 3.21
760 762 6.889301 AAATCAGTGTCAGAACATCAACAT 57.111 33.333 0.00 0.00 37.81 2.71
766 768 4.142816 GCGCTTAAATCAGTGTCAGAACAT 60.143 41.667 0.00 0.00 37.81 2.71
771 773 3.257393 AGAGCGCTTAAATCAGTGTCAG 58.743 45.455 13.26 0.00 0.00 3.51
774 776 7.928706 AGAATATAAGAGCGCTTAAATCAGTGT 59.071 33.333 13.26 0.00 39.85 3.55
777 779 9.632807 ACTAGAATATAAGAGCGCTTAAATCAG 57.367 33.333 13.26 12.83 39.85 2.90
786 788 9.068008 GTTTAGATCACTAGAATATAAGAGCGC 57.932 37.037 0.00 0.00 0.00 5.92
825 827 8.367943 TCGAAGATAGTACTAGCTCTGTAAAG 57.632 38.462 20.39 7.78 29.39 1.85
831 833 5.369833 TGCTTCGAAGATAGTACTAGCTCT 58.630 41.667 28.95 10.34 35.04 4.09
834 836 6.496571 TCTTTGCTTCGAAGATAGTACTAGC 58.503 40.000 28.95 10.21 35.04 3.42
835 837 7.806014 GGATCTTTGCTTCGAAGATAGTACTAG 59.194 40.741 28.95 12.28 42.62 2.57
847 849 1.822990 ACTACGGGATCTTTGCTTCGA 59.177 47.619 0.00 0.00 0.00 3.71
848 850 2.159226 AGACTACGGGATCTTTGCTTCG 60.159 50.000 0.00 0.00 0.00 3.79
849 851 3.190874 CAGACTACGGGATCTTTGCTTC 58.809 50.000 0.00 0.00 0.00 3.86
863 865 2.622436 CTAGCCAAACAGCCAGACTAC 58.378 52.381 0.00 0.00 0.00 2.73
873 876 5.237779 GCCGTATAAATAAGCTAGCCAAACA 59.762 40.000 12.13 0.00 0.00 2.83
899 902 3.774216 CAGGAAGGAGAGGAGAAGATGTT 59.226 47.826 0.00 0.00 0.00 2.71
900 903 3.373830 CAGGAAGGAGAGGAGAAGATGT 58.626 50.000 0.00 0.00 0.00 3.06
902 905 2.292785 TGCAGGAAGGAGAGGAGAAGAT 60.293 50.000 0.00 0.00 0.00 2.40
909 912 1.480137 CAGTAGTGCAGGAAGGAGAGG 59.520 57.143 0.00 0.00 0.00 3.69
993 1002 4.247380 GCGGCCTCCATCCCTCAG 62.247 72.222 0.00 0.00 0.00 3.35
996 1005 2.040884 TTAGCGGCCTCCATCCCT 60.041 61.111 0.00 0.00 0.00 4.20
1031 1040 1.760086 CCGTGATCCTGCTCCTCCT 60.760 63.158 0.00 0.00 0.00 3.69
1036 1045 1.442526 CCATTGCCGTGATCCTGCTC 61.443 60.000 0.00 0.00 0.00 4.26
1044 1053 2.409055 GCTGATGCCATTGCCGTGA 61.409 57.895 0.00 0.00 36.33 4.35
1045 1054 2.011741 ATGCTGATGCCATTGCCGTG 62.012 55.000 2.07 0.00 38.71 4.94
1047 1056 0.240145 CTATGCTGATGCCATTGCCG 59.760 55.000 2.07 0.00 38.71 5.69
1114 1123 2.652530 TCCGCGGTAGTTGTGGAC 59.347 61.111 27.15 0.00 40.93 4.02
1149 1158 5.624509 GCATGACAGTTACTCACCTATGACA 60.625 44.000 0.00 0.00 0.00 3.58
1183 1192 1.339151 CCAGGGAACACTAACAGAGGC 60.339 57.143 0.00 0.00 0.00 4.70
1202 1211 0.935196 CGTTCCGTTGCTATTAGGCC 59.065 55.000 0.00 0.00 0.00 5.19
1213 1222 4.216257 TGTTAGAGTAAGCTACGTTCCGTT 59.784 41.667 0.00 0.00 41.54 4.44
1217 1226 6.087820 CACAGTTGTTAGAGTAAGCTACGTTC 59.912 42.308 0.00 0.00 0.00 3.95
1218 1227 5.919141 CACAGTTGTTAGAGTAAGCTACGTT 59.081 40.000 0.00 0.00 0.00 3.99
1221 1230 5.862860 GTCCACAGTTGTTAGAGTAAGCTAC 59.137 44.000 0.00 0.00 0.00 3.58
1231 1240 4.111375 AGCTATCGTCCACAGTTGTTAG 57.889 45.455 0.00 0.00 0.00 2.34
1232 1241 4.703575 AGTAGCTATCGTCCACAGTTGTTA 59.296 41.667 0.00 0.00 0.00 2.41
1233 1242 3.510360 AGTAGCTATCGTCCACAGTTGTT 59.490 43.478 0.00 0.00 0.00 2.83
1234 1243 3.090037 AGTAGCTATCGTCCACAGTTGT 58.910 45.455 0.00 0.00 0.00 3.32
1240 1249 2.813172 GGGAGTAGTAGCTATCGTCCAC 59.187 54.545 13.39 0.00 0.00 4.02
1255 1264 5.510861 CCTCTTTTTGAGAACGAAGGGAGTA 60.511 44.000 0.00 0.00 45.39 2.59
1261 1270 5.931441 ATGTCCTCTTTTTGAGAACGAAG 57.069 39.130 0.00 0.00 45.39 3.79
1265 1274 8.447053 GTCAAGATATGTCCTCTTTTTGAGAAC 58.553 37.037 0.00 0.00 45.39 3.01
1286 1295 5.542616 AAGCATGAATTCGAAGAGTCAAG 57.457 39.130 3.35 5.68 38.43 3.02
1295 1304 2.422597 ACGGTCAAAGCATGAATTCGA 58.577 42.857 0.00 0.00 40.50 3.71
1296 1305 2.900122 ACGGTCAAAGCATGAATTCG 57.100 45.000 0.00 2.72 40.50 3.34
1299 1308 5.415701 ACAGAATTACGGTCAAAGCATGAAT 59.584 36.000 0.00 0.00 40.50 2.57
1348 1358 8.970020 AGGCACTTTCACATGATTATGATTTTA 58.030 29.630 4.20 0.00 34.01 1.52
1382 1392 4.529377 ACAAAATTGGCACCATCAGATTCT 59.471 37.500 0.00 0.00 0.00 2.40
1389 1399 4.626042 TGTAACACAAAATTGGCACCATC 58.374 39.130 0.00 0.00 0.00 3.51
1404 1414 4.523558 ACAGAGGGAGTACTTCTGTAACAC 59.476 45.833 21.74 0.00 39.53 3.32
1438 1448 9.538508 AACTAAACTAGTGATGTAAACGTTCTT 57.461 29.630 0.00 0.00 39.39 2.52
1471 1481 9.715121 TCTCTCCGTAAACAAATATAAAAGTGT 57.285 29.630 0.00 0.00 0.00 3.55
1479 1489 8.746530 TGTTACTCTCTCTCCGTAAACAAATAT 58.253 33.333 0.00 0.00 0.00 1.28
1480 1490 8.114331 TGTTACTCTCTCTCCGTAAACAAATA 57.886 34.615 0.00 0.00 0.00 1.40
1481 1491 6.989659 TGTTACTCTCTCTCCGTAAACAAAT 58.010 36.000 0.00 0.00 0.00 2.32
1482 1492 6.395426 TGTTACTCTCTCTCCGTAAACAAA 57.605 37.500 0.00 0.00 0.00 2.83
1483 1493 6.585695 ATGTTACTCTCTCTCCGTAAACAA 57.414 37.500 0.00 0.00 0.00 2.83
1484 1494 7.876936 ATATGTTACTCTCTCTCCGTAAACA 57.123 36.000 0.00 0.00 0.00 2.83
1489 1499 9.132923 TCAAATAATATGTTACTCTCTCTCCGT 57.867 33.333 0.00 0.00 0.00 4.69
1490 1500 9.400638 GTCAAATAATATGTTACTCTCTCTCCG 57.599 37.037 0.00 0.00 0.00 4.63
1531 1545 8.137437 AGGGCATATTTTGATTGTCTAAATTCG 58.863 33.333 5.07 0.37 34.58 3.34
1538 1552 7.486407 AAAAGAGGGCATATTTTGATTGTCT 57.514 32.000 3.48 0.00 31.24 3.41
1542 1556 9.875691 GTTCTAAAAAGAGGGCATATTTTGATT 57.124 29.630 5.19 0.00 32.75 2.57
1568 1584 1.396653 AATACCGTGTACTCCCTCGG 58.603 55.000 0.00 0.00 46.98 4.63
1569 1585 2.945008 TGTAATACCGTGTACTCCCTCG 59.055 50.000 0.00 0.00 0.00 4.63
1579 1595 8.618561 GCAATTTGCCTTGTATGTAATACCGTG 61.619 40.741 10.34 0.00 42.59 4.94
1580 1596 6.679392 GCAATTTGCCTTGTATGTAATACCGT 60.679 38.462 10.34 0.00 42.59 4.83
1648 1664 5.536538 TGAATAAAGTTGGTGGTGTAATGCA 59.463 36.000 0.00 0.00 0.00 3.96
1688 1704 7.936847 TGCTCTAAACTCTTGAAACTATCCAAA 59.063 33.333 0.00 0.00 0.00 3.28
1715 1731 7.833786 CCGGTTGTTGGCTATACTATTATCTA 58.166 38.462 0.00 0.00 0.00 1.98
1716 1732 6.698380 CCGGTTGTTGGCTATACTATTATCT 58.302 40.000 0.00 0.00 0.00 1.98
1717 1733 6.963049 CCGGTTGTTGGCTATACTATTATC 57.037 41.667 0.00 0.00 0.00 1.75
1733 2080 2.943033 GCAACTTCATATAGCCGGTTGT 59.057 45.455 1.90 0.00 37.12 3.32
1736 2083 2.256117 GGCAACTTCATATAGCCGGT 57.744 50.000 1.90 0.00 35.42 5.28
1747 2094 4.410492 CTACAAGTGATGTGGCAACTTC 57.590 45.455 0.06 0.06 43.77 3.01
1755 2102 6.932356 ATTAGATTGGCTACAAGTGATGTG 57.068 37.500 0.00 0.00 43.77 3.21
1756 2103 6.708054 GCTATTAGATTGGCTACAAGTGATGT 59.292 38.462 0.00 0.00 46.36 3.06
1757 2104 6.148480 GGCTATTAGATTGGCTACAAGTGATG 59.852 42.308 0.00 0.00 40.49 3.07
1758 2105 6.043706 AGGCTATTAGATTGGCTACAAGTGAT 59.956 38.462 0.00 0.00 40.49 3.06
1761 2108 5.896073 AGGCTATTAGATTGGCTACAAGT 57.104 39.130 0.00 0.00 40.49 3.16
1762 2109 8.097038 TGAATAGGCTATTAGATTGGCTACAAG 58.903 37.037 19.27 0.00 43.36 3.16
1763 2110 7.973402 TGAATAGGCTATTAGATTGGCTACAA 58.027 34.615 19.27 0.00 43.36 2.41
1764 2111 7.553504 TGAATAGGCTATTAGATTGGCTACA 57.446 36.000 19.27 6.77 43.36 2.74
1766 2113 9.267071 TGTATGAATAGGCTATTAGATTGGCTA 57.733 33.333 19.27 7.77 44.28 3.93
1767 2114 8.150827 TGTATGAATAGGCTATTAGATTGGCT 57.849 34.615 19.27 4.21 42.77 4.75
1768 2115 8.792830 TTGTATGAATAGGCTATTAGATTGGC 57.207 34.615 19.27 6.36 0.00 4.52
1818 2165 9.343539 GAAAGAGGTGAGCTAAATATTAATGGT 57.656 33.333 0.00 0.00 0.00 3.55
1819 2166 9.566432 AGAAAGAGGTGAGCTAAATATTAATGG 57.434 33.333 0.00 0.00 0.00 3.16
1823 2170 9.201989 TGAGAGAAAGAGGTGAGCTAAATATTA 57.798 33.333 0.00 0.00 0.00 0.98
1825 2172 7.124901 TGTGAGAGAAAGAGGTGAGCTAAATAT 59.875 37.037 0.00 0.00 0.00 1.28
1827 2174 5.247110 TGTGAGAGAAAGAGGTGAGCTAAAT 59.753 40.000 0.00 0.00 0.00 1.40
1828 2175 4.588951 TGTGAGAGAAAGAGGTGAGCTAAA 59.411 41.667 0.00 0.00 0.00 1.85
1829 2176 4.152647 TGTGAGAGAAAGAGGTGAGCTAA 58.847 43.478 0.00 0.00 0.00 3.09
1830 2177 3.767711 TGTGAGAGAAAGAGGTGAGCTA 58.232 45.455 0.00 0.00 0.00 3.32
1832 2179 3.608316 ATGTGAGAGAAAGAGGTGAGC 57.392 47.619 0.00 0.00 0.00 4.26
1833 2180 5.417266 TCACTATGTGAGAGAAAGAGGTGAG 59.583 44.000 0.00 0.00 37.67 3.51
1834 2181 5.325239 TCACTATGTGAGAGAAAGAGGTGA 58.675 41.667 0.00 0.00 37.67 4.02
1835 2182 5.651387 TCACTATGTGAGAGAAAGAGGTG 57.349 43.478 0.00 0.00 37.67 4.00
1836 2183 6.459923 GTTTCACTATGTGAGAGAAAGAGGT 58.540 40.000 0.66 0.00 42.95 3.85
1837 2184 5.872070 GGTTTCACTATGTGAGAGAAAGAGG 59.128 44.000 0.66 0.00 42.95 3.69
1838 2185 6.589523 CAGGTTTCACTATGTGAGAGAAAGAG 59.410 42.308 0.66 0.00 42.95 2.85
1839 2186 6.459066 CAGGTTTCACTATGTGAGAGAAAGA 58.541 40.000 0.66 0.00 42.95 2.52
1840 2187 5.121454 GCAGGTTTCACTATGTGAGAGAAAG 59.879 44.000 0.66 0.00 42.95 2.62
1841 2188 4.997395 GCAGGTTTCACTATGTGAGAGAAA 59.003 41.667 0.66 0.00 43.69 2.52
1842 2189 4.563580 GGCAGGTTTCACTATGTGAGAGAA 60.564 45.833 0.66 0.00 43.69 2.87
1843 2190 3.055819 GGCAGGTTTCACTATGTGAGAGA 60.056 47.826 0.66 0.00 43.69 3.10
1844 2191 3.055530 AGGCAGGTTTCACTATGTGAGAG 60.056 47.826 0.66 0.00 43.69 3.20
1845 2192 2.906389 AGGCAGGTTTCACTATGTGAGA 59.094 45.455 0.66 0.00 43.69 3.27
1846 2193 3.005554 CAGGCAGGTTTCACTATGTGAG 58.994 50.000 0.66 0.00 43.69 3.51
1847 2194 2.875672 GCAGGCAGGTTTCACTATGTGA 60.876 50.000 0.00 0.00 41.09 3.58
1848 2195 1.470098 GCAGGCAGGTTTCACTATGTG 59.530 52.381 0.00 0.00 34.45 3.21
1849 2196 1.073763 TGCAGGCAGGTTTCACTATGT 59.926 47.619 0.00 0.00 0.00 2.29
1853 2200 0.111061 TGATGCAGGCAGGTTTCACT 59.889 50.000 0.00 0.00 0.00 3.41
1874 2602 3.476552 TGACTCAGGACATCAACCAAAC 58.523 45.455 0.00 0.00 0.00 2.93
1878 2606 3.130516 TCGTATGACTCAGGACATCAACC 59.869 47.826 0.00 0.00 0.00 3.77
1883 2611 3.892284 AGACTCGTATGACTCAGGACAT 58.108 45.455 0.00 0.00 0.00 3.06
1899 2627 0.742635 GTGCAAGCCAGGCTAGACTC 60.743 60.000 16.56 4.50 38.25 3.36
1902 2630 1.297689 CTGTGCAAGCCAGGCTAGA 59.702 57.895 16.56 0.00 38.25 2.43
1913 2641 0.746063 CCTTTTGTCAGGCTGTGCAA 59.254 50.000 15.27 16.99 0.00 4.08
1951 2679 3.987404 GGCTAACCACACTGCCAG 58.013 61.111 0.00 0.00 44.34 4.85
1975 2703 2.110967 CGCAAGACATGGGAGGCTG 61.111 63.158 0.00 0.00 44.39 4.85
1976 2704 2.270205 CGCAAGACATGGGAGGCT 59.730 61.111 0.00 0.00 44.39 4.58
2047 2776 7.788026 AGTACATAAAGAAATCCACACCGATA 58.212 34.615 0.00 0.00 0.00 2.92
2050 2779 7.837202 TTAGTACATAAAGAAATCCACACCG 57.163 36.000 0.00 0.00 0.00 4.94
2062 2791 5.478233 TGCCGTGCAATTAGTACATAAAG 57.522 39.130 0.00 0.00 34.76 1.85
2096 2825 1.398958 TTTGGTTTGTGCCCTGAGCC 61.399 55.000 0.00 0.00 42.71 4.70
2102 2831 1.134551 ACATGTGTTTGGTTTGTGCCC 60.135 47.619 0.00 0.00 0.00 5.36
2111 2840 1.670674 GCCTGATGCACATGTGTTTGG 60.671 52.381 26.01 19.94 40.77 3.28
2140 2869 5.185635 TGGAATGTTGGAGAATTTTGCCTAG 59.814 40.000 0.00 0.00 0.00 3.02
2141 2870 5.083122 TGGAATGTTGGAGAATTTTGCCTA 58.917 37.500 0.00 0.00 0.00 3.93
2147 2876 3.766051 GAGCCTGGAATGTTGGAGAATTT 59.234 43.478 0.00 0.00 0.00 1.82
2169 2898 1.134280 AGAAACCTCATGCCTGGATCG 60.134 52.381 0.00 0.00 0.00 3.69
2184 2913 1.518903 GACACCCTGCCTGCAGAAAC 61.519 60.000 20.29 4.74 46.30 2.78
2185 2914 1.228245 GACACCCTGCCTGCAGAAA 60.228 57.895 20.29 1.14 46.30 2.52
2190 2919 4.729918 CCTGGACACCCTGCCTGC 62.730 72.222 0.00 0.00 0.00 4.85
2202 2931 0.260230 TGTTTGGTTGAAGGCCTGGA 59.740 50.000 5.69 0.00 0.00 3.86
2203 2932 0.389025 GTGTTTGGTTGAAGGCCTGG 59.611 55.000 5.69 0.00 0.00 4.45
2206 2935 1.745890 GGGTGTTTGGTTGAAGGCC 59.254 57.895 0.00 0.00 0.00 5.19
2302 3033 5.936956 AGTATAGGTAGATGTACGTGCCTAC 59.063 44.000 0.00 4.91 32.26 3.18
2346 3077 7.874528 AGAATCATGCTTGGAAGTTTTAAAAGG 59.125 33.333 0.00 0.00 0.00 3.11
2384 3115 9.364653 CTGGTACTCCTATTTACTAGTGGTTAT 57.635 37.037 5.39 0.00 34.23 1.89
2385 3116 7.781693 CCTGGTACTCCTATTTACTAGTGGTTA 59.218 40.741 5.39 0.00 34.23 2.85
2408 3139 4.853924 ATTGCACTTTTCTTGTACCCTG 57.146 40.909 0.00 0.00 0.00 4.45
2414 3145 4.081198 TCACCCAAATTGCACTTTTCTTGT 60.081 37.500 0.00 0.00 0.00 3.16
2436 3168 6.624423 AGTTGTCAATACTTGCATGGAATTC 58.376 36.000 0.00 0.00 0.00 2.17
2452 3184 1.134848 GCCAGTGCCAAAAGTTGTCAA 60.135 47.619 0.00 0.00 0.00 3.18
2453 3185 0.459489 GCCAGTGCCAAAAGTTGTCA 59.541 50.000 0.00 0.00 0.00 3.58
2524 3263 5.938125 GGATCCTCACTACTGCAAACTTAAA 59.062 40.000 3.84 0.00 0.00 1.52
2555 3294 2.202987 GCGGACCCAGAGCATCAG 60.203 66.667 0.00 0.00 37.82 2.90
2582 3321 5.337652 GCTTGTCCAACCTCTAGACACTAAT 60.338 44.000 0.00 0.00 40.10 1.73
2585 3324 2.300437 GCTTGTCCAACCTCTAGACACT 59.700 50.000 0.00 0.00 40.10 3.55
2621 3360 2.038557 ACCACTCCCACAATGACTACAC 59.961 50.000 0.00 0.00 0.00 2.90
2649 3388 5.316987 GGACTACAAATCTAATCCATGGGG 58.683 45.833 13.02 0.22 0.00 4.96
2662 3401 4.589908 AGAATGCCTTTCGGACTACAAAT 58.410 39.130 0.00 0.00 39.46 2.32
2663 3402 4.015872 AGAATGCCTTTCGGACTACAAA 57.984 40.909 0.00 0.00 39.46 2.83
2669 3408 3.312697 GGTTGATAGAATGCCTTTCGGAC 59.687 47.826 0.00 0.00 39.46 4.79
2670 3409 3.054728 TGGTTGATAGAATGCCTTTCGGA 60.055 43.478 0.00 0.00 39.46 4.55
2673 3412 6.044682 CCAATTGGTTGATAGAATGCCTTTC 58.955 40.000 16.90 0.00 37.53 2.62
2678 3417 4.340381 AGAGCCAATTGGTTGATAGAATGC 59.660 41.667 25.19 6.57 37.53 3.56
2707 3446 7.774625 TGCACCATGGAATATGTACCATATATG 59.225 37.037 21.47 5.68 43.89 1.78
2708 3447 7.871082 TGCACCATGGAATATGTACCATATAT 58.129 34.615 21.47 0.00 43.89 0.86
2709 3448 7.264294 TGCACCATGGAATATGTACCATATA 57.736 36.000 21.47 0.00 43.89 0.86
2710 3449 6.138391 TGCACCATGGAATATGTACCATAT 57.862 37.500 21.47 0.00 43.89 1.78
2711 3450 5.574970 TGCACCATGGAATATGTACCATA 57.425 39.130 21.47 0.00 43.89 2.74
2712 3451 4.451891 TGCACCATGGAATATGTACCAT 57.548 40.909 21.47 0.00 46.22 3.55
2715 3454 6.262944 TCTTGAATGCACCATGGAATATGTAC 59.737 38.462 21.47 3.39 0.00 2.90
2720 3459 6.602410 TTTTCTTGAATGCACCATGGAATA 57.398 33.333 21.47 3.70 0.00 1.75
2742 3481 4.402616 TTCATCCCAGGGATCACTTTTT 57.597 40.909 19.44 0.00 40.98 1.94
2770 3511 9.661563 TGGTCAATTAGTCACGAGTTATAATTT 57.338 29.630 0.00 0.00 0.00 1.82
2795 3536 9.277783 CTCATTTAATTACTTCCCAGTATCCTG 57.722 37.037 0.00 0.00 35.32 3.86
2832 3575 6.527423 TCGTTCCCTGTAACAATTCTAACTT 58.473 36.000 0.00 0.00 0.00 2.66
2834 3577 6.090493 GTCTCGTTCCCTGTAACAATTCTAAC 59.910 42.308 0.00 0.00 0.00 2.34
2837 3580 4.283722 AGTCTCGTTCCCTGTAACAATTCT 59.716 41.667 0.00 0.00 0.00 2.40
2881 3626 1.899814 AGCAAGTTCGATAGTGTCCCA 59.100 47.619 0.00 0.00 37.40 4.37
2902 3647 0.825410 ACACCGTTGTCAGGTACACA 59.175 50.000 0.00 0.00 40.59 3.72
3097 3842 2.122954 GGGTGGAGGGAGTGGAGT 59.877 66.667 0.00 0.00 0.00 3.85
3129 3874 0.899717 GCCCTCACATTGGCCTTTCA 60.900 55.000 3.32 0.00 41.97 2.69
3180 3931 2.288273 ACAACGAGGAAGAAGAAGGACG 60.288 50.000 0.00 0.00 0.00 4.79
3241 3992 1.202758 TGTTGATCAAACTGGTCGGCT 60.203 47.619 10.35 0.00 39.70 5.52
3258 4009 2.358247 GTCCATCGGCGGTGTGTT 60.358 61.111 20.02 0.00 0.00 3.32
3301 4052 4.482030 TGGTGTAGGTGAAGTAGTACCAA 58.518 43.478 0.00 0.00 39.46 3.67
3343 4094 5.380900 CTCTGGAGGTAGATGATGACAGTA 58.619 45.833 0.00 0.00 0.00 2.74
3400 4151 4.437587 AGGCCCATGAGCACTGCC 62.438 66.667 0.27 0.18 42.48 4.85
3418 4169 1.014044 TGAAGAAGACGGCGCATGAC 61.014 55.000 10.83 0.80 0.00 3.06
3559 4310 3.055719 CTGTGCGGCGGGTCAAAT 61.056 61.111 9.78 0.00 0.00 2.32
3662 4413 1.258445 AACGTCTTCCCATCGGAGCT 61.258 55.000 0.00 0.00 40.10 4.09
3852 4603 0.826715 CTCGGGGATCTTGAAGCTGA 59.173 55.000 0.00 0.00 0.00 4.26
4114 4871 3.011517 AATGCCTCCGACAGCCCT 61.012 61.111 0.00 0.00 0.00 5.19
4407 5164 1.372499 TCGGCGGACTTCTTGAACG 60.372 57.895 7.21 0.00 0.00 3.95
4442 5199 0.807667 ACGTCAAGCTCGATGGCATC 60.808 55.000 17.58 17.58 34.17 3.91
4561 5329 7.515514 AGACTTATAGGATTCATGTTGGATCCT 59.484 37.037 18.92 18.92 43.52 3.24
4596 5367 9.927668 CCCATGTTTGATTATTCCCAAATATAC 57.072 33.333 0.00 0.00 34.07 1.47
4623 5394 9.755804 CACACTCCCATCACATATATGATATAC 57.244 37.037 19.63 0.00 37.20 1.47
4701 5472 0.937304 TGAGCTCTGTTTTGTCGTGC 59.063 50.000 16.19 0.00 0.00 5.34
4706 5477 3.216800 TGCAAGATGAGCTCTGTTTTGT 58.783 40.909 16.19 0.00 33.29 2.83
4737 5508 6.056884 TCAATGATGAATCAACGATGGATCA 58.943 36.000 0.00 0.00 40.69 2.92
4776 5547 1.415374 CGTTCGGTCGTCATTGAACT 58.585 50.000 2.92 0.00 38.78 3.01
4782 5553 0.316772 CGATAGCGTTCGGTCGTCAT 60.317 55.000 0.00 0.00 35.50 3.06
4795 5566 2.152830 ACGTAGGGTCAGATCGATAGC 58.847 52.381 0.00 0.00 0.00 2.97
4809 5580 2.031437 GTCTAACACGCCTAGACGTAGG 59.969 54.545 3.04 0.00 46.34 3.18
4821 5592 0.450583 TAGCGCTCCAGTCTAACACG 59.549 55.000 16.34 0.00 0.00 4.49
4853 5624 0.385751 AGATCGGCTGTCGTATGTGG 59.614 55.000 0.09 0.00 40.32 4.17
4857 5628 2.847441 TCTGTAGATCGGCTGTCGTAT 58.153 47.619 0.09 0.00 40.32 3.06
4860 5631 2.455032 CTTTCTGTAGATCGGCTGTCG 58.545 52.381 0.00 0.00 40.90 4.35
4866 5637 2.280628 GTTGGCCTTTCTGTAGATCGG 58.719 52.381 3.32 0.00 0.00 4.18
4874 5645 1.002087 ACGAGTAGGTTGGCCTTTCTG 59.998 52.381 3.32 0.00 44.18 3.02
4951 5722 6.586082 GCAAGGTTTGGTTTGTGTTCATATAG 59.414 38.462 0.00 0.00 0.00 1.31
4993 5765 2.300967 ATGACCAGGGCCACGTGAT 61.301 57.895 19.30 0.00 34.50 3.06
5003 5959 3.117738 AGAATTAAGGCCTCATGACCAGG 60.118 47.826 5.23 0.33 0.00 4.45
5027 5983 9.543018 GTTACAACAAATTATCTAGCACACTTC 57.457 33.333 0.00 0.00 0.00 3.01
5142 6181 1.540267 GAGAGACTAAGCCGACACACA 59.460 52.381 0.00 0.00 0.00 3.72
5143 6182 1.466024 CGAGAGACTAAGCCGACACAC 60.466 57.143 0.00 0.00 0.00 3.82
5145 6184 1.085091 TCGAGAGACTAAGCCGACAC 58.915 55.000 0.00 0.00 33.31 3.67
5150 6189 2.159170 AGCACATTCGAGAGACTAAGCC 60.159 50.000 0.00 0.00 41.84 4.35
5162 6201 1.138859 TCACCCCTATGAGCACATTCG 59.861 52.381 0.83 0.00 37.87 3.34
5176 6215 5.165961 ACATATGCACATATACTCACCCC 57.834 43.478 1.58 0.00 33.01 4.95
5177 6216 7.555965 TCATACATATGCACATATACTCACCC 58.444 38.462 1.58 0.00 33.01 4.61
5210 6278 7.789273 TTTTCTTTTGAACACCGTATAGACA 57.211 32.000 0.00 0.00 38.30 3.41
5211 6279 9.326339 GATTTTTCTTTTGAACACCGTATAGAC 57.674 33.333 0.00 0.00 38.30 2.59
5219 6287 3.493129 GCGGGATTTTTCTTTTGAACACC 59.507 43.478 0.00 0.00 38.30 4.16
5230 6298 1.670791 TATCACGGGCGGGATTTTTC 58.329 50.000 0.00 0.00 39.29 2.29
5239 6307 1.542492 AGGTAGGTATATCACGGGCG 58.458 55.000 0.00 0.00 0.00 6.13
5301 6373 9.362539 TCTTTTGTAAGTCGATAAATGAGTACC 57.637 33.333 0.00 0.00 32.98 3.34
5344 6417 5.007682 TGCCTCACCTTTTATTGACTTACC 58.992 41.667 0.00 0.00 0.00 2.85
5356 6429 6.670695 AATTGTCTTAATTGCCTCACCTTT 57.329 33.333 0.00 0.00 0.00 3.11
5359 6432 8.825667 TTAAAAATTGTCTTAATTGCCTCACC 57.174 30.769 0.00 0.00 0.00 4.02
5361 6434 8.865090 TCCTTAAAAATTGTCTTAATTGCCTCA 58.135 29.630 0.00 0.00 0.00 3.86
5410 6483 0.468226 TGAAGTGCTCGTCCAACCTT 59.532 50.000 0.00 0.00 0.00 3.50
5420 6493 4.882671 TTTCTTGTCAAGTGAAGTGCTC 57.117 40.909 12.30 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.