Multiple sequence alignment - TraesCS2D01G038700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G038700 chr2D 100.000 4695 0 0 1 4695 14252137 14256831 0.000000e+00 8671.0
1 TraesCS2D01G038700 chr2B 87.988 2997 217 48 85 2989 26098012 26100957 0.000000e+00 3408.0
2 TraesCS2D01G038700 chr2B 92.367 773 32 8 2986 3734 26100991 26101760 0.000000e+00 1075.0
3 TraesCS2D01G038700 chr2B 100.000 49 0 0 3733 3781 26101920 26101968 1.800000e-14 91.6
4 TraesCS2D01G038700 chr2A 86.829 2255 157 61 78 2255 16549319 16551510 0.000000e+00 2390.0
5 TraesCS2D01G038700 chr2A 94.051 1412 62 5 2309 3706 16551534 16552937 0.000000e+00 2122.0
6 TraesCS2D01G038700 chr2A 88.423 501 55 2 4184 4681 778614830 778614330 6.720000e-168 601.0
7 TraesCS2D01G038700 chr2A 98.592 284 3 1 3706 3988 16553017 16553300 7.010000e-138 501.0
8 TraesCS2D01G038700 chr2A 94.624 186 9 1 3980 4165 552287782 552287598 2.140000e-73 287.0
9 TraesCS2D01G038700 chr7D 94.882 508 24 1 4190 4695 555176191 555175684 0.000000e+00 793.0
10 TraesCS2D01G038700 chr7D 97.207 179 5 0 3987 4165 346795144 346794966 2.120000e-78 303.0
11 TraesCS2D01G038700 chr7D 91.748 206 12 2 3982 4183 219006719 219006923 9.950000e-72 281.0
12 TraesCS2D01G038700 chr6A 89.152 507 51 3 4186 4689 60994351 60994856 3.080000e-176 628.0
13 TraesCS2D01G038700 chr6A 94.624 186 9 1 3980 4165 390615717 390615901 2.140000e-73 287.0
14 TraesCS2D01G038700 chr1A 89.336 497 49 2 4187 4681 532417119 532417613 5.160000e-174 621.0
15 TraesCS2D01G038700 chr1A 88.605 509 56 1 4183 4689 588655963 588656471 6.670000e-173 617.0
16 TraesCS2D01G038700 chr1A 96.089 179 7 0 3987 4165 291844220 291844398 4.600000e-75 292.0
17 TraesCS2D01G038700 chr1A 98.765 81 1 0 1 81 502471732 502471652 1.360000e-30 145.0
18 TraesCS2D01G038700 chr1A 98.750 80 1 0 1 80 141694480 141694401 4.900000e-30 143.0
19 TraesCS2D01G038700 chr1A 98.750 80 1 0 1 80 374201213 374201292 4.900000e-30 143.0
20 TraesCS2D01G038700 chr1B 88.166 507 56 3 4186 4689 26872463 26872968 6.720000e-168 601.0
21 TraesCS2D01G038700 chr1B 96.364 55 1 1 2255 2308 305435838 305435892 6.470000e-14 89.8
22 TraesCS2D01G038700 chr1B 89.394 66 5 2 2245 2309 145802119 145802055 1.080000e-11 82.4
23 TraesCS2D01G038700 chr1B 89.394 66 5 2 2245 2309 145829248 145829184 1.080000e-11 82.4
24 TraesCS2D01G038700 chr1B 96.000 50 2 0 2256 2305 286354782 286354831 1.080000e-11 82.4
25 TraesCS2D01G038700 chr5B 87.598 508 57 5 4183 4686 377620462 377620967 6.770000e-163 584.0
26 TraesCS2D01G038700 chr7A 88.819 474 51 1 4210 4681 705442271 705441798 8.760000e-162 580.0
27 TraesCS2D01G038700 chr6B 87.230 509 59 5 4185 4689 625284041 625283535 4.070000e-160 575.0
28 TraesCS2D01G038700 chr6B 94.737 57 2 1 2253 2308 29782708 29782652 2.330000e-13 87.9
29 TraesCS2D01G038700 chr6D 96.089 179 7 0 3987 4165 238848692 238848514 4.600000e-75 292.0
30 TraesCS2D01G038700 chr6D 100.000 79 0 0 1 79 346348965 346349043 3.790000e-31 147.0
31 TraesCS2D01G038700 chr6D 98.750 80 1 0 1 80 94303660 94303581 4.900000e-30 143.0
32 TraesCS2D01G038700 chr4D 95.161 186 8 1 3980 4165 118141693 118141877 4.600000e-75 292.0
33 TraesCS2D01G038700 chr4D 95.161 186 8 1 3980 4165 230287273 230287457 4.600000e-75 292.0
34 TraesCS2D01G038700 chr4D 92.537 201 10 5 3961 4158 367326991 367327189 2.770000e-72 283.0
35 TraesCS2D01G038700 chr4D 100.000 79 0 0 1 79 100445791 100445713 3.790000e-31 147.0
36 TraesCS2D01G038700 chr4D 98.750 80 1 0 1 80 222164289 222164210 4.900000e-30 143.0
37 TraesCS2D01G038700 chr3A 91.566 166 2 1 3374 3527 692356819 692356984 7.910000e-53 219.0
38 TraesCS2D01G038700 chr3A 100.000 79 0 0 1 79 393336184 393336262 3.790000e-31 147.0
39 TraesCS2D01G038700 chr3A 89.231 65 5 2 2252 2314 699064546 699064482 3.890000e-11 80.5
40 TraesCS2D01G038700 chr1D 98.750 80 1 0 1 80 262495765 262495844 4.900000e-30 143.0
41 TraesCS2D01G038700 chr3D 93.333 60 1 3 2254 2312 36571438 36571495 8.370000e-13 86.1
42 TraesCS2D01G038700 chr3D 91.935 62 2 3 2249 2308 564907484 564907424 3.010000e-12 84.2
43 TraesCS2D01G038700 chr4A 97.872 47 0 1 2265 2310 728648093 728648047 3.890000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G038700 chr2D 14252137 14256831 4694 False 8671.000000 8671 100.000000 1 4695 1 chr2D.!!$F1 4694
1 TraesCS2D01G038700 chr2B 26098012 26101968 3956 False 1524.866667 3408 93.451667 85 3781 3 chr2B.!!$F1 3696
2 TraesCS2D01G038700 chr2A 16549319 16553300 3981 False 1671.000000 2390 93.157333 78 3988 3 chr2A.!!$F1 3910
3 TraesCS2D01G038700 chr2A 778614330 778614830 500 True 601.000000 601 88.423000 4184 4681 1 chr2A.!!$R2 497
4 TraesCS2D01G038700 chr7D 555175684 555176191 507 True 793.000000 793 94.882000 4190 4695 1 chr7D.!!$R2 505
5 TraesCS2D01G038700 chr6A 60994351 60994856 505 False 628.000000 628 89.152000 4186 4689 1 chr6A.!!$F1 503
6 TraesCS2D01G038700 chr1A 588655963 588656471 508 False 617.000000 617 88.605000 4183 4689 1 chr1A.!!$F4 506
7 TraesCS2D01G038700 chr1B 26872463 26872968 505 False 601.000000 601 88.166000 4186 4689 1 chr1B.!!$F1 503
8 TraesCS2D01G038700 chr5B 377620462 377620967 505 False 584.000000 584 87.598000 4183 4686 1 chr5B.!!$F1 503
9 TraesCS2D01G038700 chr6B 625283535 625284041 506 True 575.000000 575 87.230000 4185 4689 1 chr6B.!!$R2 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
584 591 0.034574 CCCGACAAATGGTCCCATCA 60.035 55.0 0.00 0.0 43.95 3.07 F
1749 1839 0.108520 TCTTCACCGCCGGTTACATC 60.109 55.0 5.76 0.0 31.02 3.06 F
2279 2416 0.325296 ATGCTACTCCCTCCGTTCCA 60.325 55.0 0.00 0.0 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1843 1933 0.037232 ACAGCTAGCCCGAGTTGTTC 60.037 55.0 12.13 0.00 37.59 3.18 R
2906 3058 0.036306 CACTTGGGTCGCCCTTAAGT 59.964 55.0 14.76 13.26 45.70 2.24 R
4157 4613 0.032815 TGTCCGTGCGTTCATCAAGA 59.967 50.0 0.00 0.00 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.476202 TCTACATTAGTTCCGATCAACAATATG 57.524 33.333 0.00 0.00 0.00 1.78
28 29 9.261180 CTACATTAGTTCCGATCAACAATATGT 57.739 33.333 0.00 5.08 32.86 2.29
29 30 8.142994 ACATTAGTTCCGATCAACAATATGTC 57.857 34.615 0.00 0.00 0.00 3.06
30 31 7.768582 ACATTAGTTCCGATCAACAATATGTCA 59.231 33.333 0.00 0.00 0.00 3.58
31 32 8.777413 CATTAGTTCCGATCAACAATATGTCAT 58.223 33.333 0.00 0.00 0.00 3.06
32 33 8.731275 TTAGTTCCGATCAACAATATGTCATT 57.269 30.769 0.00 0.00 0.00 2.57
33 34 7.251704 AGTTCCGATCAACAATATGTCATTC 57.748 36.000 0.00 0.00 0.00 2.67
34 35 6.823182 AGTTCCGATCAACAATATGTCATTCA 59.177 34.615 0.00 0.00 0.00 2.57
35 36 6.603237 TCCGATCAACAATATGTCATTCAC 57.397 37.500 0.00 0.00 0.00 3.18
36 37 6.112058 TCCGATCAACAATATGTCATTCACA 58.888 36.000 0.00 0.00 40.18 3.58
64 65 7.602517 ACTTATCAGAAATGTTGTAGTGCTC 57.397 36.000 0.00 0.00 0.00 4.26
65 66 6.595716 ACTTATCAGAAATGTTGTAGTGCTCC 59.404 38.462 0.00 0.00 0.00 4.70
66 67 3.674997 TCAGAAATGTTGTAGTGCTCCC 58.325 45.455 0.00 0.00 0.00 4.30
67 68 3.072330 TCAGAAATGTTGTAGTGCTCCCA 59.928 43.478 0.00 0.00 0.00 4.37
68 69 3.189287 CAGAAATGTTGTAGTGCTCCCAC 59.811 47.826 0.00 0.00 42.39 4.61
108 109 7.361457 AGATGAACCGGATATTCTAACTTGA 57.639 36.000 9.46 0.00 0.00 3.02
123 124 1.000955 ACTTGACTTCACCAGCTACGG 59.999 52.381 0.00 0.00 0.00 4.02
128 129 1.549170 ACTTCACCAGCTACGGTAAGG 59.451 52.381 0.00 0.00 37.07 2.69
129 130 1.822990 CTTCACCAGCTACGGTAAGGA 59.177 52.381 0.00 0.00 37.07 3.36
130 131 1.180029 TCACCAGCTACGGTAAGGAC 58.820 55.000 0.00 0.00 37.07 3.85
170 174 0.181350 CCCTCACTATGCAACTCCCC 59.819 60.000 0.00 0.00 0.00 4.81
171 175 0.179073 CCTCACTATGCAACTCCCCG 60.179 60.000 0.00 0.00 0.00 5.73
172 176 0.824109 CTCACTATGCAACTCCCCGA 59.176 55.000 0.00 0.00 0.00 5.14
173 177 1.414181 CTCACTATGCAACTCCCCGAT 59.586 52.381 0.00 0.00 0.00 4.18
210 214 5.054477 CCCCGAGTATAACTGTAACAATGG 58.946 45.833 0.00 0.00 0.00 3.16
223 227 7.168219 ACTGTAACAATGGTCATGATGTAACT 58.832 34.615 0.00 0.00 0.00 2.24
271 275 5.567138 AATACACAGTAGATGCCTTTTGC 57.433 39.130 0.00 0.00 41.77 3.68
273 277 4.286297 ACACAGTAGATGCCTTTTGCTA 57.714 40.909 0.00 0.00 42.00 3.49
286 290 9.846248 GATGCCTTTTGCTAAACTATATTATGG 57.154 33.333 0.00 0.00 42.00 2.74
331 335 3.199946 AGTCGATAACCACCACCATCAAT 59.800 43.478 0.00 0.00 0.00 2.57
385 390 2.110901 ACCTACACATCGACGTCTCT 57.889 50.000 14.70 0.00 0.00 3.10
413 418 3.248024 ACCTACAACATCCCTGTCTTCA 58.752 45.455 0.00 0.00 33.36 3.02
415 420 2.191128 ACAACATCCCTGTCTTCAGC 57.809 50.000 0.00 0.00 40.09 4.26
427 432 1.463831 GTCTTCAGCGTGACTCGACTA 59.536 52.381 0.22 0.00 42.86 2.59
431 436 0.097325 CAGCGTGACTCGACTACCTC 59.903 60.000 0.22 0.00 42.86 3.85
436 441 0.249676 TGACTCGACTACCTCTCGCT 59.750 55.000 0.00 0.00 0.00 4.93
443 448 1.598601 GACTACCTCTCGCTAGAACGG 59.401 57.143 0.00 0.00 0.00 4.44
470 475 7.390027 AGTTTCTCTAATATGCTCGCCATTAT 58.610 34.615 0.00 0.00 35.34 1.28
472 477 6.530019 TCTCTAATATGCTCGCCATTATCA 57.470 37.500 0.00 0.00 35.34 2.15
489 494 0.396435 TCAGTCATGGCACCGTCTTT 59.604 50.000 0.00 0.00 0.00 2.52
518 523 0.318441 CGCATGGATCCAGATACGGT 59.682 55.000 21.33 0.00 0.00 4.83
535 540 0.927029 GGTGGAGGGGCTTTATCCTT 59.073 55.000 0.00 0.00 34.04 3.36
551 557 1.075050 TCCTTCACGGTAGTCACCTCT 59.925 52.381 0.00 0.00 43.33 3.69
554 560 0.601558 TCACGGTAGTCACCTCTTGC 59.398 55.000 0.00 0.00 43.33 4.01
573 580 0.604243 CATCGTTCACCCCCGACAAA 60.604 55.000 0.00 0.00 35.69 2.83
574 581 0.326927 ATCGTTCACCCCCGACAAAT 59.673 50.000 0.00 0.00 35.69 2.32
576 583 1.582610 CGTTCACCCCCGACAAATGG 61.583 60.000 0.00 0.00 0.00 3.16
582 589 1.306296 CCCCGACAAATGGTCCCAT 59.694 57.895 0.00 0.00 43.95 4.00
584 591 0.034574 CCCGACAAATGGTCCCATCA 60.035 55.000 0.00 0.00 43.95 3.07
587 594 2.642427 CGACAAATGGTCCCATCATGA 58.358 47.619 15.21 0.00 43.95 3.07
617 624 1.377229 GGGGGTGTCCATCGAAACA 59.623 57.895 0.00 0.00 37.22 2.83
623 630 2.032030 GGTGTCCATCGAAACACAACAG 60.032 50.000 22.56 0.00 45.99 3.16
638 666 6.305693 ACACAACAGTTTCTTCTATTGAGC 57.694 37.500 0.00 0.00 0.00 4.26
640 668 6.318648 ACACAACAGTTTCTTCTATTGAGCAA 59.681 34.615 0.00 0.00 0.00 3.91
695 724 0.534873 TCTCATCCGCACCAATTCGA 59.465 50.000 0.00 0.00 0.00 3.71
702 731 1.467374 CCGCACCAATTCGAATTCCAC 60.467 52.381 20.31 9.49 0.00 4.02
715 744 1.703411 ATTCCACCACCCAAACACAG 58.297 50.000 0.00 0.00 0.00 3.66
716 745 0.333312 TTCCACCACCCAAACACAGT 59.667 50.000 0.00 0.00 0.00 3.55
723 752 2.232452 CCACCCAAACACAGTTTGACAA 59.768 45.455 20.66 0.00 0.00 3.18
742 771 2.616376 CAAAGACAATGTGGTTCACCGA 59.384 45.455 0.00 0.00 39.43 4.69
760 789 2.607771 CCGATTGACTTTTTGGTGGCAG 60.608 50.000 0.00 0.00 0.00 4.85
761 790 2.607771 CGATTGACTTTTTGGTGGCAGG 60.608 50.000 0.00 0.00 0.00 4.85
762 791 1.118838 TTGACTTTTTGGTGGCAGGG 58.881 50.000 0.00 0.00 0.00 4.45
763 792 0.260230 TGACTTTTTGGTGGCAGGGA 59.740 50.000 0.00 0.00 0.00 4.20
764 793 1.342474 TGACTTTTTGGTGGCAGGGAA 60.342 47.619 0.00 0.00 0.00 3.97
765 794 1.341209 GACTTTTTGGTGGCAGGGAAG 59.659 52.381 0.00 0.00 0.00 3.46
781 810 1.192428 GAAGGGAAAGGTAGGCGAGA 58.808 55.000 0.00 0.00 0.00 4.04
787 816 3.118519 GGGAAAGGTAGGCGAGATTAACA 60.119 47.826 0.00 0.00 0.00 2.41
804 833 2.673976 ACACGATTAAACGCCACAAC 57.326 45.000 4.91 0.00 36.70 3.32
902 935 2.282040 GCAGTGAGCCAGCCACTT 60.282 61.111 10.00 0.00 42.44 3.16
903 936 2.331132 GCAGTGAGCCAGCCACTTC 61.331 63.158 10.00 3.92 42.44 3.01
904 937 1.374190 CAGTGAGCCAGCCACTTCT 59.626 57.895 10.00 0.00 42.44 2.85
905 938 0.250640 CAGTGAGCCAGCCACTTCTT 60.251 55.000 10.00 0.00 42.44 2.52
952 998 2.037677 ACCCCCAACAACCTCCCT 60.038 61.111 0.00 0.00 0.00 4.20
955 1001 2.763902 CCCAACAACCTCCCTCCC 59.236 66.667 0.00 0.00 0.00 4.30
1152 1203 1.578897 AGCTCTCTTCTTTCCCCTCC 58.421 55.000 0.00 0.00 0.00 4.30
1155 1206 0.252284 TCTCTTCTTTCCCCTCCGCT 60.252 55.000 0.00 0.00 0.00 5.52
1160 1211 3.567579 CTTTCCCCTCCGCTGCCAA 62.568 63.158 0.00 0.00 0.00 4.52
1161 1212 2.843912 CTTTCCCCTCCGCTGCCAAT 62.844 60.000 0.00 0.00 0.00 3.16
1170 1221 0.734942 CCGCTGCCAATTCTTGCTTG 60.735 55.000 0.00 0.00 0.00 4.01
1171 1222 0.241749 CGCTGCCAATTCTTGCTTGA 59.758 50.000 0.00 0.00 0.00 3.02
1214 1266 5.704978 GGATGGGATAGAAGAATTGAGCTTC 59.295 44.000 0.00 0.00 41.53 3.86
1348 1406 1.306141 TTGCGAGATCTGAGGGGGT 60.306 57.895 0.00 0.00 0.00 4.95
1365 1423 1.655329 GTAGTCCTGGGATCTCGCG 59.345 63.158 0.00 0.00 0.00 5.87
1436 1498 0.179100 GCTCATTGCGTCTCTGCCTA 60.179 55.000 0.00 0.00 0.00 3.93
1445 1507 1.606668 CGTCTCTGCCTACTCAGATCC 59.393 57.143 0.00 0.00 41.73 3.36
1456 1518 1.000955 ACTCAGATCCGCGTCTGTTTT 59.999 47.619 21.72 8.49 44.66 2.43
1457 1519 1.391485 CTCAGATCCGCGTCTGTTTTG 59.609 52.381 21.72 10.32 44.66 2.44
1458 1520 1.148310 CAGATCCGCGTCTGTTTTGT 58.852 50.000 16.31 0.00 40.54 2.83
1459 1521 1.126846 CAGATCCGCGTCTGTTTTGTC 59.873 52.381 16.31 0.00 40.54 3.18
1572 1660 2.752358 CTGCTGCAACTCCTCCCA 59.248 61.111 3.02 0.00 0.00 4.37
1629 1717 6.808212 CCAAGTGCGTAAAATTCTGAATGAAT 59.192 34.615 3.22 0.00 46.49 2.57
1650 1738 1.063031 GTTGCGGCTCTGAATTTTGC 58.937 50.000 0.00 0.00 0.00 3.68
1653 1741 3.025866 CGGCTCTGAATTTTGCTGC 57.974 52.632 0.00 0.00 0.00 5.25
1654 1742 0.795735 CGGCTCTGAATTTTGCTGCG 60.796 55.000 0.00 0.00 0.00 5.18
1675 1764 4.214437 CGTTCAAAGTGTGAGCTGAATTC 58.786 43.478 0.00 0.00 37.61 2.17
1737 1827 2.754946 TTGTATGGACCGTCTTCACC 57.245 50.000 0.00 0.00 0.00 4.02
1749 1839 0.108520 TCTTCACCGCCGGTTACATC 60.109 55.000 5.76 0.00 31.02 3.06
1852 1942 6.954944 TGAAATGGAAACTTAGAACAACTCG 58.045 36.000 0.00 0.00 0.00 4.18
1867 1957 4.129737 TCGGGCTAGCTGTGCGAC 62.130 66.667 15.72 0.00 0.00 5.19
1923 2034 1.067846 TCCGTCAGTCATCACTTTCGG 60.068 52.381 3.55 3.55 42.83 4.30
2031 2168 5.932883 TGTGTTCTATGCGTTATGTTAACCA 59.067 36.000 2.48 0.00 0.00 3.67
2037 2174 8.101654 TCTATGCGTTATGTTAACCACTTTTT 57.898 30.769 2.48 0.00 0.00 1.94
2105 2242 3.397482 CTTCTGCGGGAAGGATATTGAG 58.603 50.000 10.30 0.00 45.55 3.02
2189 2326 4.950744 GCGTTCTGCATTGCTGTT 57.049 50.000 10.49 0.00 45.45 3.16
2240 2377 5.137551 AGCTTCCTGTAAGTTTTAAGCCAA 58.862 37.500 0.00 0.00 40.06 4.52
2247 2384 6.863126 CCTGTAAGTTTTAAGCCAACAATCTG 59.137 38.462 0.00 0.00 0.00 2.90
2261 2398 9.189156 AGCCAACAATCTGTTATTATGTTACAT 57.811 29.630 2.58 2.58 38.77 2.29
2262 2399 9.236691 GCCAACAATCTGTTATTATGTTACATG 57.763 33.333 8.26 0.00 38.77 3.21
2269 2406 9.712305 ATCTGTTATTATGTTACATGCTACTCC 57.288 33.333 8.26 0.00 0.00 3.85
2270 2407 8.148351 TCTGTTATTATGTTACATGCTACTCCC 58.852 37.037 8.26 0.00 0.00 4.30
2271 2408 8.029782 TGTTATTATGTTACATGCTACTCCCT 57.970 34.615 8.26 0.00 0.00 4.20
2272 2409 8.148351 TGTTATTATGTTACATGCTACTCCCTC 58.852 37.037 8.26 0.00 0.00 4.30
2273 2410 5.546621 TTATGTTACATGCTACTCCCTCC 57.453 43.478 8.26 0.00 0.00 4.30
2274 2411 1.754803 TGTTACATGCTACTCCCTCCG 59.245 52.381 0.00 0.00 0.00 4.63
2275 2412 1.755380 GTTACATGCTACTCCCTCCGT 59.245 52.381 0.00 0.00 0.00 4.69
2277 2414 0.824759 ACATGCTACTCCCTCCGTTC 59.175 55.000 0.00 0.00 0.00 3.95
2279 2416 0.325296 ATGCTACTCCCTCCGTTCCA 60.325 55.000 0.00 0.00 0.00 3.53
2280 2417 0.543410 TGCTACTCCCTCCGTTCCAA 60.543 55.000 0.00 0.00 0.00 3.53
2281 2418 0.611714 GCTACTCCCTCCGTTCCAAA 59.388 55.000 0.00 0.00 0.00 3.28
2282 2419 1.002773 GCTACTCCCTCCGTTCCAAAA 59.997 52.381 0.00 0.00 0.00 2.44
2283 2420 2.355818 GCTACTCCCTCCGTTCCAAAAT 60.356 50.000 0.00 0.00 0.00 1.82
2284 2421 3.118519 GCTACTCCCTCCGTTCCAAAATA 60.119 47.826 0.00 0.00 0.00 1.40
2285 2422 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2289 2426 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2290 2427 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2291 2428 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
2292 2429 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
2293 2430 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
2294 2431 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
2295 2432 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
2297 2434 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
2299 2436 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
2300 2437 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
2301 2438 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
2302 2439 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
2305 2442 8.788325 AAATAGATGACCCAACTTTGTACTAC 57.212 34.615 0.00 0.00 0.00 2.73
2314 2453 8.557592 ACCCAACTTTGTACTACTTATTTAGC 57.442 34.615 0.00 0.00 0.00 3.09
2320 2459 8.985805 ACTTTGTACTACTTATTTAGCACACAC 58.014 33.333 0.00 0.00 27.11 3.82
2343 2482 1.382522 CATAGCGGCTCCATTTGTGT 58.617 50.000 5.39 0.00 0.00 3.72
2353 2492 4.399303 GGCTCCATTTGTGTGCTTATTACT 59.601 41.667 0.00 0.00 0.00 2.24
2354 2493 5.105756 GGCTCCATTTGTGTGCTTATTACTT 60.106 40.000 0.00 0.00 0.00 2.24
2363 2502 8.964420 TTGTGTGCTTATTACTTTTCTATTGC 57.036 30.769 0.00 0.00 0.00 3.56
2412 2551 7.849804 ATCACTGTGGTACTATGATTGTTTC 57.150 36.000 8.11 0.00 0.00 2.78
2423 2562 9.037737 GTACTATGATTGTTTCGGCTTACATAA 57.962 33.333 0.00 0.00 0.00 1.90
2447 2586 7.741027 ATATTGTCTCTGAAAATGATGCGAT 57.259 32.000 0.00 0.00 0.00 4.58
2456 2595 0.750546 AATGATGCGATGCTGCTGGT 60.751 50.000 0.00 0.00 35.36 4.00
2473 2612 5.549347 TGCTGGTTGAAATATTGCACATTT 58.451 33.333 0.00 5.37 0.00 2.32
2551 2690 4.365111 TTCCATGGCGCCCTTGCT 62.365 61.111 26.77 0.00 34.43 3.91
2733 2874 6.515272 AAGTTTGTTGATGTGAAGTTCTGT 57.485 33.333 4.17 0.00 0.00 3.41
2734 2875 5.883661 AGTTTGTTGATGTGAAGTTCTGTG 58.116 37.500 4.17 0.00 0.00 3.66
2735 2876 5.415701 AGTTTGTTGATGTGAAGTTCTGTGT 59.584 36.000 4.17 0.00 0.00 3.72
2736 2877 5.484173 TTGTTGATGTGAAGTTCTGTGTC 57.516 39.130 4.17 0.00 0.00 3.67
2752 2904 2.887783 TGTGTCTCTCTGTGTCTTCCTC 59.112 50.000 0.00 0.00 0.00 3.71
2757 2909 0.600557 CTCTGTGTCTTCCTCGCTGT 59.399 55.000 0.00 0.00 0.00 4.40
2906 3058 1.694150 CAGAAGAACCCACTGACAGGA 59.306 52.381 7.51 0.00 34.07 3.86
2972 3124 2.503331 CCAGATGCCATGCGGTAATTA 58.497 47.619 0.00 0.00 33.28 1.40
3110 3306 0.320771 GGATGTTGTGTGCGAGGTCT 60.321 55.000 0.00 0.00 0.00 3.85
3119 3315 0.246635 GTGCGAGGTCTAAGCCTTCA 59.753 55.000 0.00 0.00 39.34 3.02
3220 3416 6.494893 TGAATCCACAAAATGCTAGTACAC 57.505 37.500 0.00 0.00 0.00 2.90
3254 3450 2.537625 CTCGAAATCATGAGTTCTCGGC 59.462 50.000 27.64 7.70 33.67 5.54
3280 3476 8.776470 CAAACATTTTATTGTTCCAAAGCTCAT 58.224 29.630 0.00 0.00 38.85 2.90
3301 3497 2.369860 TGAGCTCAACTCTCACCATTGT 59.630 45.455 15.67 0.00 46.41 2.71
3501 3713 7.533289 TTACAGTGGACCGATGATATGATAA 57.467 36.000 2.91 0.00 0.00 1.75
3517 3729 8.540388 TGATATGATAATACTTTACTGCCCCTC 58.460 37.037 0.00 0.00 0.00 4.30
3520 3733 7.208064 TGATAATACTTTACTGCCCCTCTTT 57.792 36.000 0.00 0.00 0.00 2.52
3959 4415 6.267817 CCACAATTGTTATGCAGATCGATTT 58.732 36.000 8.77 0.00 0.00 2.17
3994 4450 8.470657 TTGTGTATATTCTGCTCATCTACTCT 57.529 34.615 0.00 0.00 0.00 3.24
3995 4451 8.470657 TGTGTATATTCTGCTCATCTACTCTT 57.529 34.615 0.00 0.00 0.00 2.85
3996 4452 9.574516 TGTGTATATTCTGCTCATCTACTCTTA 57.425 33.333 0.00 0.00 0.00 2.10
4003 4459 9.995003 ATTCTGCTCATCTACTCTTATAAAAGG 57.005 33.333 0.00 0.00 33.22 3.11
4004 4460 7.437748 TCTGCTCATCTACTCTTATAAAAGGC 58.562 38.462 0.00 0.00 33.22 4.35
4005 4461 7.069950 TCTGCTCATCTACTCTTATAAAAGGCA 59.930 37.037 0.00 0.00 33.22 4.75
4006 4462 7.212976 TGCTCATCTACTCTTATAAAAGGCAG 58.787 38.462 0.00 0.00 33.22 4.85
4007 4463 7.069950 TGCTCATCTACTCTTATAAAAGGCAGA 59.930 37.037 0.00 0.00 33.22 4.26
4008 4464 7.598493 GCTCATCTACTCTTATAAAAGGCAGAG 59.402 40.741 0.00 0.00 39.03 3.35
4009 4465 8.540507 TCATCTACTCTTATAAAAGGCAGAGT 57.459 34.615 7.48 7.48 46.23 3.24
4010 4466 8.982723 TCATCTACTCTTATAAAAGGCAGAGTT 58.017 33.333 7.61 0.00 42.79 3.01
4011 4467 9.039870 CATCTACTCTTATAAAAGGCAGAGTTG 57.960 37.037 7.61 6.51 42.79 3.16
4012 4468 7.556844 TCTACTCTTATAAAAGGCAGAGTTGG 58.443 38.462 7.61 3.42 42.79 3.77
4013 4469 6.128138 ACTCTTATAAAAGGCAGAGTTGGT 57.872 37.500 0.00 0.00 42.79 3.67
4014 4470 5.940470 ACTCTTATAAAAGGCAGAGTTGGTG 59.060 40.000 0.00 0.00 42.79 4.17
4015 4471 6.121776 TCTTATAAAAGGCAGAGTTGGTGA 57.878 37.500 0.00 0.00 33.22 4.02
4016 4472 5.938125 TCTTATAAAAGGCAGAGTTGGTGAC 59.062 40.000 0.00 0.00 33.22 3.67
4017 4473 1.308998 AAAAGGCAGAGTTGGTGACG 58.691 50.000 0.00 0.00 0.00 4.35
4018 4474 0.468226 AAAGGCAGAGTTGGTGACGA 59.532 50.000 0.00 0.00 0.00 4.20
4019 4475 0.687354 AAGGCAGAGTTGGTGACGAT 59.313 50.000 0.00 0.00 0.00 3.73
4020 4476 0.036952 AGGCAGAGTTGGTGACGATG 60.037 55.000 0.00 0.00 0.00 3.84
4021 4477 1.021390 GGCAGAGTTGGTGACGATGG 61.021 60.000 0.00 0.00 0.00 3.51
4022 4478 0.320771 GCAGAGTTGGTGACGATGGT 60.321 55.000 0.00 0.00 0.00 3.55
4023 4479 1.432514 CAGAGTTGGTGACGATGGTG 58.567 55.000 0.00 0.00 0.00 4.17
4024 4480 1.048601 AGAGTTGGTGACGATGGTGT 58.951 50.000 0.00 0.00 0.00 4.16
4025 4481 1.148310 GAGTTGGTGACGATGGTGTG 58.852 55.000 0.00 0.00 0.00 3.82
4026 4482 0.884704 AGTTGGTGACGATGGTGTGC 60.885 55.000 0.00 0.00 0.00 4.57
4027 4483 1.599518 TTGGTGACGATGGTGTGCC 60.600 57.895 0.00 0.00 0.00 5.01
4028 4484 2.050836 TTGGTGACGATGGTGTGCCT 62.051 55.000 0.00 0.00 35.27 4.75
4029 4485 2.034879 GGTGACGATGGTGTGCCTG 61.035 63.158 0.00 0.00 35.27 4.85
4030 4486 1.301716 GTGACGATGGTGTGCCTGT 60.302 57.895 0.00 0.00 35.27 4.00
4031 4487 1.005037 TGACGATGGTGTGCCTGTC 60.005 57.895 0.00 0.00 34.78 3.51
4032 4488 1.005037 GACGATGGTGTGCCTGTCA 60.005 57.895 0.00 0.00 34.54 3.58
4033 4489 0.391661 GACGATGGTGTGCCTGTCAT 60.392 55.000 0.00 0.00 34.54 3.06
4034 4490 0.391661 ACGATGGTGTGCCTGTCATC 60.392 55.000 0.00 0.00 35.27 2.92
4035 4491 1.091771 CGATGGTGTGCCTGTCATCC 61.092 60.000 0.00 0.00 34.24 3.51
4036 4492 0.254178 GATGGTGTGCCTGTCATCCT 59.746 55.000 0.00 0.00 35.27 3.24
4037 4493 0.034767 ATGGTGTGCCTGTCATCCTG 60.035 55.000 0.00 0.00 35.27 3.86
4038 4494 2.042831 GGTGTGCCTGTCATCCTGC 61.043 63.158 0.00 0.00 0.00 4.85
4039 4495 1.302752 GTGTGCCTGTCATCCTGCA 60.303 57.895 0.00 0.00 0.00 4.41
4040 4496 0.890542 GTGTGCCTGTCATCCTGCAA 60.891 55.000 0.00 0.00 35.16 4.08
4041 4497 0.038599 TGTGCCTGTCATCCTGCAAT 59.961 50.000 0.00 0.00 35.16 3.56
4042 4498 1.281577 TGTGCCTGTCATCCTGCAATA 59.718 47.619 0.00 0.00 35.16 1.90
4043 4499 2.092267 TGTGCCTGTCATCCTGCAATAT 60.092 45.455 0.00 0.00 35.16 1.28
4044 4500 3.136260 TGTGCCTGTCATCCTGCAATATA 59.864 43.478 0.00 0.00 35.16 0.86
4045 4501 3.750130 GTGCCTGTCATCCTGCAATATAG 59.250 47.826 0.00 0.00 35.16 1.31
4046 4502 3.244665 TGCCTGTCATCCTGCAATATAGG 60.245 47.826 0.00 0.00 36.63 2.57
4047 4503 3.341823 CCTGTCATCCTGCAATATAGGC 58.658 50.000 0.00 0.00 35.23 3.93
4048 4504 3.341823 CTGTCATCCTGCAATATAGGCC 58.658 50.000 0.00 0.00 35.23 5.19
4049 4505 2.289631 TGTCATCCTGCAATATAGGCCG 60.290 50.000 0.00 0.00 35.23 6.13
4050 4506 1.977854 TCATCCTGCAATATAGGCCGT 59.022 47.619 0.00 0.00 35.23 5.68
4051 4507 2.028112 TCATCCTGCAATATAGGCCGTC 60.028 50.000 0.00 0.00 35.23 4.79
4052 4508 1.717032 TCCTGCAATATAGGCCGTCT 58.283 50.000 0.00 0.00 35.23 4.18
4053 4509 1.344438 TCCTGCAATATAGGCCGTCTG 59.656 52.381 0.00 0.00 35.23 3.51
4054 4510 1.344438 CCTGCAATATAGGCCGTCTGA 59.656 52.381 0.00 0.00 0.00 3.27
4055 4511 2.027745 CCTGCAATATAGGCCGTCTGAT 60.028 50.000 0.00 0.00 0.00 2.90
4056 4512 3.257393 CTGCAATATAGGCCGTCTGATC 58.743 50.000 0.00 0.00 0.00 2.92
4057 4513 2.899900 TGCAATATAGGCCGTCTGATCT 59.100 45.455 0.00 0.00 0.00 2.75
4058 4514 4.086457 TGCAATATAGGCCGTCTGATCTA 58.914 43.478 0.00 0.00 0.00 1.98
4059 4515 4.711846 TGCAATATAGGCCGTCTGATCTAT 59.288 41.667 0.00 0.00 0.00 1.98
4060 4516 5.891551 TGCAATATAGGCCGTCTGATCTATA 59.108 40.000 0.00 0.00 0.00 1.31
4061 4517 6.551227 TGCAATATAGGCCGTCTGATCTATAT 59.449 38.462 0.00 0.00 37.13 0.86
4062 4518 7.087639 GCAATATAGGCCGTCTGATCTATATC 58.912 42.308 0.00 0.00 35.53 1.63
4063 4519 7.040062 GCAATATAGGCCGTCTGATCTATATCT 60.040 40.741 0.00 0.00 35.53 1.98
4064 4520 9.508642 CAATATAGGCCGTCTGATCTATATCTA 57.491 37.037 0.00 0.00 35.53 1.98
4066 4522 7.811117 ATAGGCCGTCTGATCTATATCTAAC 57.189 40.000 0.00 0.00 32.93 2.34
4067 4523 4.636648 AGGCCGTCTGATCTATATCTAACG 59.363 45.833 0.00 8.07 38.92 3.18
4073 4529 8.078959 CGTCTGATCTATATCTAACGGATAGG 57.921 42.308 0.00 0.00 39.89 2.57
4074 4530 7.171848 CGTCTGATCTATATCTAACGGATAGGG 59.828 44.444 0.00 0.00 39.89 3.53
4075 4531 8.212312 GTCTGATCTATATCTAACGGATAGGGA 58.788 40.741 0.00 0.00 39.89 4.20
4076 4532 8.433599 TCTGATCTATATCTAACGGATAGGGAG 58.566 40.741 0.00 0.00 39.89 4.30
4077 4533 7.519057 TGATCTATATCTAACGGATAGGGAGG 58.481 42.308 0.00 0.00 39.89 4.30
4078 4534 7.350124 TGATCTATATCTAACGGATAGGGAGGA 59.650 40.741 0.00 0.00 39.89 3.71
4079 4535 7.520797 TCTATATCTAACGGATAGGGAGGAA 57.479 40.000 0.00 0.00 39.89 3.36
4080 4536 7.936497 TCTATATCTAACGGATAGGGAGGAAA 58.064 38.462 0.00 0.00 39.89 3.13
4081 4537 6.854091 ATATCTAACGGATAGGGAGGAAAC 57.146 41.667 0.00 0.00 39.89 2.78
4082 4538 4.261411 TCTAACGGATAGGGAGGAAACT 57.739 45.455 0.00 0.00 36.21 2.66
4083 4539 5.393068 TCTAACGGATAGGGAGGAAACTA 57.607 43.478 0.00 0.00 34.46 2.24
4084 4540 5.961897 TCTAACGGATAGGGAGGAAACTAT 58.038 41.667 0.00 0.00 34.46 2.12
4085 4541 4.957684 AACGGATAGGGAGGAAACTATG 57.042 45.455 0.00 0.00 44.43 2.23
4086 4542 4.194678 ACGGATAGGGAGGAAACTATGA 57.805 45.455 0.00 0.00 44.43 2.15
4087 4543 3.896272 ACGGATAGGGAGGAAACTATGAC 59.104 47.826 0.00 0.00 44.43 3.06
4088 4544 3.895656 CGGATAGGGAGGAAACTATGACA 59.104 47.826 0.00 0.00 44.43 3.58
4089 4545 4.344102 CGGATAGGGAGGAAACTATGACAA 59.656 45.833 0.00 0.00 44.43 3.18
4090 4546 5.012148 CGGATAGGGAGGAAACTATGACAAT 59.988 44.000 0.00 0.00 44.43 2.71
4091 4547 6.464465 CGGATAGGGAGGAAACTATGACAATT 60.464 42.308 0.00 0.00 44.43 2.32
4092 4548 7.290813 GGATAGGGAGGAAACTATGACAATTT 58.709 38.462 0.00 0.00 44.43 1.82
4093 4549 8.437575 GGATAGGGAGGAAACTATGACAATTTA 58.562 37.037 0.00 0.00 44.43 1.40
4094 4550 9.274206 GATAGGGAGGAAACTATGACAATTTAC 57.726 37.037 0.00 0.00 44.43 2.01
4095 4551 6.424032 AGGGAGGAAACTATGACAATTTACC 58.576 40.000 0.00 0.00 44.43 2.85
4096 4552 6.011981 AGGGAGGAAACTATGACAATTTACCA 60.012 38.462 0.00 0.00 44.43 3.25
4097 4553 6.318900 GGGAGGAAACTATGACAATTTACCAG 59.681 42.308 0.00 0.00 44.43 4.00
4098 4554 6.183360 GGAGGAAACTATGACAATTTACCAGC 60.183 42.308 0.00 0.00 44.43 4.85
4099 4555 6.245408 AGGAAACTATGACAATTTACCAGCA 58.755 36.000 0.00 0.00 40.61 4.41
4100 4556 6.151144 AGGAAACTATGACAATTTACCAGCAC 59.849 38.462 0.00 0.00 40.61 4.40
4101 4557 6.151144 GGAAACTATGACAATTTACCAGCACT 59.849 38.462 0.00 0.00 0.00 4.40
4102 4558 6.743575 AACTATGACAATTTACCAGCACTC 57.256 37.500 0.00 0.00 0.00 3.51
4103 4559 5.186198 ACTATGACAATTTACCAGCACTCC 58.814 41.667 0.00 0.00 0.00 3.85
4104 4560 3.788227 TGACAATTTACCAGCACTCCT 57.212 42.857 0.00 0.00 0.00 3.69
4105 4561 3.674997 TGACAATTTACCAGCACTCCTC 58.325 45.455 0.00 0.00 0.00 3.71
4106 4562 3.327757 TGACAATTTACCAGCACTCCTCT 59.672 43.478 0.00 0.00 0.00 3.69
4107 4563 3.935828 GACAATTTACCAGCACTCCTCTC 59.064 47.826 0.00 0.00 0.00 3.20
4108 4564 3.274288 CAATTTACCAGCACTCCTCTCC 58.726 50.000 0.00 0.00 0.00 3.71
4109 4565 2.024176 TTTACCAGCACTCCTCTCCA 57.976 50.000 0.00 0.00 0.00 3.86
4110 4566 1.267121 TTACCAGCACTCCTCTCCAC 58.733 55.000 0.00 0.00 0.00 4.02
4111 4567 0.114364 TACCAGCACTCCTCTCCACA 59.886 55.000 0.00 0.00 0.00 4.17
4112 4568 0.546267 ACCAGCACTCCTCTCCACAT 60.546 55.000 0.00 0.00 0.00 3.21
4113 4569 0.617413 CCAGCACTCCTCTCCACATT 59.383 55.000 0.00 0.00 0.00 2.71
4114 4570 1.004044 CCAGCACTCCTCTCCACATTT 59.996 52.381 0.00 0.00 0.00 2.32
4115 4571 2.082231 CAGCACTCCTCTCCACATTTG 58.918 52.381 0.00 0.00 0.00 2.32
4116 4572 0.807496 GCACTCCTCTCCACATTTGC 59.193 55.000 0.00 0.00 0.00 3.68
4117 4573 1.883638 GCACTCCTCTCCACATTTGCA 60.884 52.381 0.00 0.00 0.00 4.08
4118 4574 2.082231 CACTCCTCTCCACATTTGCAG 58.918 52.381 0.00 0.00 0.00 4.41
4119 4575 1.980765 ACTCCTCTCCACATTTGCAGA 59.019 47.619 0.00 0.00 0.00 4.26
4120 4576 2.575279 ACTCCTCTCCACATTTGCAGAT 59.425 45.455 0.00 0.00 0.00 2.90
4121 4577 3.776969 ACTCCTCTCCACATTTGCAGATA 59.223 43.478 0.00 0.00 0.00 1.98
4122 4578 4.225942 ACTCCTCTCCACATTTGCAGATAA 59.774 41.667 0.00 0.00 0.00 1.75
4123 4579 4.774124 TCCTCTCCACATTTGCAGATAAG 58.226 43.478 0.00 0.00 0.00 1.73
4124 4580 3.881688 CCTCTCCACATTTGCAGATAAGG 59.118 47.826 0.00 0.00 0.00 2.69
4125 4581 3.282021 TCTCCACATTTGCAGATAAGGC 58.718 45.455 0.00 0.00 0.00 4.35
4126 4582 2.360165 CTCCACATTTGCAGATAAGGCC 59.640 50.000 0.00 0.00 0.00 5.19
4127 4583 2.025037 TCCACATTTGCAGATAAGGCCT 60.025 45.455 0.00 0.00 0.00 5.19
4128 4584 2.762327 CCACATTTGCAGATAAGGCCTT 59.238 45.455 24.18 24.18 0.00 4.35
4129 4585 3.181483 CCACATTTGCAGATAAGGCCTTC 60.181 47.826 24.49 9.18 0.00 3.46
4130 4586 3.026694 ACATTTGCAGATAAGGCCTTCC 58.973 45.455 24.49 15.44 0.00 3.46
4131 4587 2.143876 TTTGCAGATAAGGCCTTCCC 57.856 50.000 24.49 15.04 0.00 3.97
4133 4589 0.839946 TGCAGATAAGGCCTTCCCTC 59.160 55.000 24.49 17.06 45.62 4.30
4134 4590 0.250081 GCAGATAAGGCCTTCCCTCG 60.250 60.000 24.49 14.56 45.62 4.63
4135 4591 1.123928 CAGATAAGGCCTTCCCTCGT 58.876 55.000 24.49 0.00 45.62 4.18
4136 4592 1.486726 CAGATAAGGCCTTCCCTCGTT 59.513 52.381 24.49 0.00 45.62 3.85
4137 4593 1.763545 AGATAAGGCCTTCCCTCGTTC 59.236 52.381 24.49 8.68 45.62 3.95
4138 4594 1.485066 GATAAGGCCTTCCCTCGTTCA 59.515 52.381 24.49 0.18 45.62 3.18
4139 4595 1.580059 TAAGGCCTTCCCTCGTTCAT 58.420 50.000 24.49 0.00 45.62 2.57
4140 4596 0.253327 AAGGCCTTCCCTCGTTCATC 59.747 55.000 13.78 0.00 45.62 2.92
4141 4597 1.153147 GGCCTTCCCTCGTTCATCC 60.153 63.158 0.00 0.00 0.00 3.51
4142 4598 1.627297 GGCCTTCCCTCGTTCATCCT 61.627 60.000 0.00 0.00 0.00 3.24
4143 4599 0.253327 GCCTTCCCTCGTTCATCCTT 59.747 55.000 0.00 0.00 0.00 3.36
4144 4600 1.340114 GCCTTCCCTCGTTCATCCTTT 60.340 52.381 0.00 0.00 0.00 3.11
4145 4601 2.880167 GCCTTCCCTCGTTCATCCTTTT 60.880 50.000 0.00 0.00 0.00 2.27
4146 4602 3.010420 CCTTCCCTCGTTCATCCTTTTC 58.990 50.000 0.00 0.00 0.00 2.29
4147 4603 3.307762 CCTTCCCTCGTTCATCCTTTTCT 60.308 47.826 0.00 0.00 0.00 2.52
4148 4604 3.611766 TCCCTCGTTCATCCTTTTCTC 57.388 47.619 0.00 0.00 0.00 2.87
4149 4605 2.236395 TCCCTCGTTCATCCTTTTCTCC 59.764 50.000 0.00 0.00 0.00 3.71
4150 4606 2.633488 CCTCGTTCATCCTTTTCTCCC 58.367 52.381 0.00 0.00 0.00 4.30
4151 4607 2.027192 CCTCGTTCATCCTTTTCTCCCA 60.027 50.000 0.00 0.00 0.00 4.37
4152 4608 3.003480 CTCGTTCATCCTTTTCTCCCAC 58.997 50.000 0.00 0.00 0.00 4.61
4153 4609 2.370519 TCGTTCATCCTTTTCTCCCACA 59.629 45.455 0.00 0.00 0.00 4.17
4154 4610 3.146066 CGTTCATCCTTTTCTCCCACAA 58.854 45.455 0.00 0.00 0.00 3.33
4155 4611 3.189287 CGTTCATCCTTTTCTCCCACAAG 59.811 47.826 0.00 0.00 0.00 3.16
4156 4612 4.398319 GTTCATCCTTTTCTCCCACAAGA 58.602 43.478 0.00 0.00 0.00 3.02
4157 4613 4.934797 TCATCCTTTTCTCCCACAAGAT 57.065 40.909 0.00 0.00 0.00 2.40
4158 4614 4.848357 TCATCCTTTTCTCCCACAAGATC 58.152 43.478 0.00 0.00 0.00 2.75
4159 4615 4.537688 TCATCCTTTTCTCCCACAAGATCT 59.462 41.667 0.00 0.00 0.00 2.75
4160 4616 5.014544 TCATCCTTTTCTCCCACAAGATCTT 59.985 40.000 0.88 0.88 0.00 2.40
4161 4617 4.655963 TCCTTTTCTCCCACAAGATCTTG 58.344 43.478 29.74 29.74 45.58 3.02
4162 4618 4.350816 TCCTTTTCTCCCACAAGATCTTGA 59.649 41.667 36.15 16.73 42.93 3.02
4163 4619 5.014544 TCCTTTTCTCCCACAAGATCTTGAT 59.985 40.000 36.15 20.22 42.93 2.57
4164 4620 5.125097 CCTTTTCTCCCACAAGATCTTGATG 59.875 44.000 36.15 27.70 42.93 3.07
4165 4621 5.503634 TTTCTCCCACAAGATCTTGATGA 57.496 39.130 36.15 25.87 42.93 2.92
4166 4622 5.503634 TTCTCCCACAAGATCTTGATGAA 57.496 39.130 36.15 25.68 42.93 2.57
4167 4623 4.836825 TCTCCCACAAGATCTTGATGAAC 58.163 43.478 36.15 0.00 42.93 3.18
4168 4624 3.599343 TCCCACAAGATCTTGATGAACG 58.401 45.455 36.15 20.25 42.93 3.95
4169 4625 2.096496 CCCACAAGATCTTGATGAACGC 59.904 50.000 36.15 0.00 42.93 4.84
4170 4626 2.743664 CCACAAGATCTTGATGAACGCA 59.256 45.455 36.15 0.00 42.93 5.24
4171 4627 3.425359 CCACAAGATCTTGATGAACGCAC 60.425 47.826 36.15 0.00 42.93 5.34
4172 4628 2.413112 ACAAGATCTTGATGAACGCACG 59.587 45.455 36.15 10.46 42.93 5.34
4173 4629 1.645034 AGATCTTGATGAACGCACGG 58.355 50.000 0.00 0.00 0.00 4.94
4174 4630 1.204704 AGATCTTGATGAACGCACGGA 59.795 47.619 0.00 0.00 0.00 4.69
4175 4631 1.324736 GATCTTGATGAACGCACGGAC 59.675 52.381 0.00 0.00 0.00 4.79
4176 4632 0.032815 TCTTGATGAACGCACGGACA 59.967 50.000 0.00 0.00 0.00 4.02
4177 4633 1.078709 CTTGATGAACGCACGGACAT 58.921 50.000 0.00 0.00 0.00 3.06
4178 4634 1.061131 CTTGATGAACGCACGGACATC 59.939 52.381 17.93 17.93 39.35 3.06
4179 4635 0.246360 TGATGAACGCACGGACATCT 59.754 50.000 22.02 1.05 39.54 2.90
4180 4636 1.337728 TGATGAACGCACGGACATCTT 60.338 47.619 22.02 5.10 39.54 2.40
4181 4637 1.061131 GATGAACGCACGGACATCTTG 59.939 52.381 17.68 0.00 36.98 3.02
4287 4743 1.134401 CACATGACGCCCTGGAAGTAT 60.134 52.381 0.00 0.00 0.00 2.12
4329 4785 6.073003 GCTAACTTGTGAGCTTCAACATTAGT 60.073 38.462 19.20 11.44 35.73 2.24
4331 4787 4.757149 ACTTGTGAGCTTCAACATTAGTCC 59.243 41.667 0.00 0.00 0.00 3.85
4374 4830 3.682592 ACTAGTGGGTGGTGCTCTATA 57.317 47.619 0.00 0.00 0.00 1.31
4426 4882 0.329596 CTTGGCTTCCCTTGGCTAGT 59.670 55.000 0.00 0.00 0.00 2.57
4495 4953 2.092049 TGAGATCTTCTGCCAATGCCAT 60.092 45.455 0.00 0.00 36.33 4.40
4496 4954 3.136992 TGAGATCTTCTGCCAATGCCATA 59.863 43.478 0.00 0.00 36.33 2.74
4558 5016 1.446792 CTCCTGCAATGACGAGCGT 60.447 57.895 0.00 0.00 0.00 5.07
4598 5056 2.836981 ACCCTGGCTATCTCTGCATATC 59.163 50.000 0.00 0.00 0.00 1.63
4630 5088 3.119709 CTCCTCTCTGCGACCGAGC 62.120 68.421 0.00 0.00 37.71 5.03
4690 5148 2.181021 CCTCGGTCGTACTGCCAC 59.819 66.667 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.261180 ACATATTGTTGATCGGAACTAATGTAG 57.739 33.333 8.34 0.00 0.00 2.74
4 5 7.768582 TGACATATTGTTGATCGGAACTAATGT 59.231 33.333 9.20 9.20 0.00 2.71
5 6 8.141835 TGACATATTGTTGATCGGAACTAATG 57.858 34.615 0.00 2.53 0.00 1.90
6 7 8.908786 ATGACATATTGTTGATCGGAACTAAT 57.091 30.769 0.00 0.54 0.00 1.73
7 8 8.731275 AATGACATATTGTTGATCGGAACTAA 57.269 30.769 0.00 0.00 0.00 2.24
8 9 7.984617 TGAATGACATATTGTTGATCGGAACTA 59.015 33.333 0.00 0.00 0.00 2.24
9 10 6.823182 TGAATGACATATTGTTGATCGGAACT 59.177 34.615 0.00 0.00 0.00 3.01
10 11 6.907212 GTGAATGACATATTGTTGATCGGAAC 59.093 38.462 0.00 0.00 0.00 3.62
11 12 6.597280 TGTGAATGACATATTGTTGATCGGAA 59.403 34.615 0.00 0.00 0.00 4.30
12 13 6.112058 TGTGAATGACATATTGTTGATCGGA 58.888 36.000 0.00 0.00 0.00 4.55
13 14 6.362210 TGTGAATGACATATTGTTGATCGG 57.638 37.500 0.00 0.00 0.00 4.18
38 39 9.319143 GAGCACTACAACATTTCTGATAAGTAT 57.681 33.333 0.00 0.00 0.00 2.12
39 40 7.764443 GGAGCACTACAACATTTCTGATAAGTA 59.236 37.037 0.00 0.00 0.00 2.24
40 41 6.595716 GGAGCACTACAACATTTCTGATAAGT 59.404 38.462 0.00 0.00 0.00 2.24
41 42 6.037610 GGGAGCACTACAACATTTCTGATAAG 59.962 42.308 0.00 0.00 0.00 1.73
42 43 5.880332 GGGAGCACTACAACATTTCTGATAA 59.120 40.000 0.00 0.00 0.00 1.75
43 44 5.045942 TGGGAGCACTACAACATTTCTGATA 60.046 40.000 0.00 0.00 0.00 2.15
44 45 4.263462 TGGGAGCACTACAACATTTCTGAT 60.263 41.667 0.00 0.00 0.00 2.90
45 46 3.072330 TGGGAGCACTACAACATTTCTGA 59.928 43.478 0.00 0.00 0.00 3.27
46 47 3.189287 GTGGGAGCACTACAACATTTCTG 59.811 47.826 0.00 0.00 0.00 3.02
47 48 3.073062 AGTGGGAGCACTACAACATTTCT 59.927 43.478 0.00 0.00 32.97 2.52
48 49 3.412386 AGTGGGAGCACTACAACATTTC 58.588 45.455 0.00 0.00 32.97 2.17
49 50 3.181445 TGAGTGGGAGCACTACAACATTT 60.181 43.478 0.00 0.00 35.23 2.32
50 51 2.371841 TGAGTGGGAGCACTACAACATT 59.628 45.455 0.00 0.00 35.23 2.71
51 52 1.977854 TGAGTGGGAGCACTACAACAT 59.022 47.619 0.00 0.00 35.23 2.71
52 53 1.070134 GTGAGTGGGAGCACTACAACA 59.930 52.381 0.00 0.00 35.23 3.33
53 54 1.344763 AGTGAGTGGGAGCACTACAAC 59.655 52.381 0.00 0.00 43.10 3.32
54 55 1.717032 AGTGAGTGGGAGCACTACAA 58.283 50.000 0.00 0.00 43.10 2.41
55 56 1.717032 AAGTGAGTGGGAGCACTACA 58.283 50.000 0.00 0.00 44.06 2.74
56 57 2.300437 AGAAAGTGAGTGGGAGCACTAC 59.700 50.000 0.00 0.00 44.06 2.73
57 58 2.609747 AGAAAGTGAGTGGGAGCACTA 58.390 47.619 0.00 0.00 44.06 2.74
58 59 1.428869 AGAAAGTGAGTGGGAGCACT 58.571 50.000 0.00 0.00 46.59 4.40
59 60 2.262423 AAGAAAGTGAGTGGGAGCAC 57.738 50.000 0.00 0.00 35.30 4.40
60 61 4.579869 GATTAAGAAAGTGAGTGGGAGCA 58.420 43.478 0.00 0.00 0.00 4.26
61 62 3.619038 CGATTAAGAAAGTGAGTGGGAGC 59.381 47.826 0.00 0.00 0.00 4.70
62 63 5.073311 TCGATTAAGAAAGTGAGTGGGAG 57.927 43.478 0.00 0.00 0.00 4.30
63 64 4.770531 TCTCGATTAAGAAAGTGAGTGGGA 59.229 41.667 0.00 0.00 0.00 4.37
64 65 5.073311 TCTCGATTAAGAAAGTGAGTGGG 57.927 43.478 0.00 0.00 0.00 4.61
65 66 6.333416 TCATCTCGATTAAGAAAGTGAGTGG 58.667 40.000 0.00 0.00 0.00 4.00
66 67 7.201478 GGTTCATCTCGATTAAGAAAGTGAGTG 60.201 40.741 0.00 0.00 0.00 3.51
67 68 6.814146 GGTTCATCTCGATTAAGAAAGTGAGT 59.186 38.462 0.00 0.00 0.00 3.41
68 69 6.020281 CGGTTCATCTCGATTAAGAAAGTGAG 60.020 42.308 0.00 0.00 0.00 3.51
69 70 5.805486 CGGTTCATCTCGATTAAGAAAGTGA 59.195 40.000 0.00 0.00 0.00 3.41
70 71 5.005779 CCGGTTCATCTCGATTAAGAAAGTG 59.994 44.000 0.00 0.00 0.00 3.16
71 72 5.105473 TCCGGTTCATCTCGATTAAGAAAGT 60.105 40.000 0.00 0.00 0.00 2.66
72 73 5.348986 TCCGGTTCATCTCGATTAAGAAAG 58.651 41.667 0.00 0.00 0.00 2.62
73 74 5.333299 TCCGGTTCATCTCGATTAAGAAA 57.667 39.130 0.00 0.00 0.00 2.52
74 75 4.994907 TCCGGTTCATCTCGATTAAGAA 57.005 40.909 0.00 0.00 0.00 2.52
75 76 6.835819 ATATCCGGTTCATCTCGATTAAGA 57.164 37.500 0.00 0.00 0.00 2.10
76 77 7.316640 AGAATATCCGGTTCATCTCGATTAAG 58.683 38.462 0.00 0.00 0.00 1.85
108 109 1.549170 CCTTACCGTAGCTGGTGAAGT 59.451 52.381 5.99 0.00 43.68 3.01
123 124 4.210955 CCTAGTCATAGTCGTCGTCCTTAC 59.789 50.000 0.00 0.00 0.00 2.34
128 129 2.287373 CCACCTAGTCATAGTCGTCGTC 59.713 54.545 0.00 0.00 0.00 4.20
129 130 2.286872 CCACCTAGTCATAGTCGTCGT 58.713 52.381 0.00 0.00 0.00 4.34
130 131 1.002684 GCCACCTAGTCATAGTCGTCG 60.003 57.143 0.00 0.00 0.00 5.12
170 174 1.201181 GGGGATGTCAGAGATCGATCG 59.799 57.143 19.33 9.36 0.00 3.69
171 175 1.201181 CGGGGATGTCAGAGATCGATC 59.799 57.143 17.91 17.91 0.00 3.69
172 176 1.202940 TCGGGGATGTCAGAGATCGAT 60.203 52.381 0.00 0.00 0.00 3.59
173 177 0.182775 TCGGGGATGTCAGAGATCGA 59.817 55.000 1.56 0.00 0.00 3.59
210 214 5.236047 GGAAGCTCATCAGTTACATCATGAC 59.764 44.000 0.00 0.00 0.00 3.06
223 227 2.166459 CCTCGTAGTTGGAAGCTCATCA 59.834 50.000 0.00 0.00 0.00 3.07
271 275 9.760077 ACGTGAAAGACCCATAATATAGTTTAG 57.240 33.333 0.00 0.00 0.00 1.85
273 277 8.262227 TGACGTGAAAGACCCATAATATAGTTT 58.738 33.333 0.00 0.00 0.00 2.66
286 290 2.673368 GTCATGGATGACGTGAAAGACC 59.327 50.000 4.06 0.00 46.16 3.85
331 335 9.119418 ACGAAAACACATATGGAATCATCATTA 57.881 29.630 7.80 0.00 34.96 1.90
385 390 2.590611 AGGGATGTTGTAGGTCTAGGGA 59.409 50.000 0.00 0.00 0.00 4.20
413 418 0.036199 AGAGGTAGTCGAGTCACGCT 60.036 55.000 0.00 0.00 42.26 5.07
415 420 0.646381 CGAGAGGTAGTCGAGTCACG 59.354 60.000 0.00 0.00 39.92 4.35
427 432 4.122017 AAACTACCGTTCTAGCGAGAGGT 61.122 47.826 11.60 11.60 37.86 3.85
431 436 3.374678 AGAGAAACTACCGTTCTAGCGAG 59.625 47.826 0.00 0.00 31.66 5.03
436 441 8.461249 AGCATATTAGAGAAACTACCGTTCTA 57.539 34.615 0.00 0.00 31.66 2.10
443 448 5.529791 TGGCGAGCATATTAGAGAAACTAC 58.470 41.667 0.00 0.00 0.00 2.73
470 475 0.396435 AAAGACGGTGCCATGACTGA 59.604 50.000 0.00 0.00 0.00 3.41
472 477 0.321653 GGAAAGACGGTGCCATGACT 60.322 55.000 0.00 0.00 0.00 3.41
518 523 1.564348 GTGAAGGATAAAGCCCCTCCA 59.436 52.381 0.00 0.00 31.17 3.86
551 557 2.359354 CGGGGGTGAACGATGCAA 60.359 61.111 0.00 0.00 0.00 4.08
554 560 0.604243 TTTGTCGGGGGTGAACGATG 60.604 55.000 0.00 0.00 41.53 3.84
573 580 0.037303 GGCGATCATGATGGGACCAT 59.963 55.000 14.30 2.93 39.69 3.55
574 581 1.344191 TGGCGATCATGATGGGACCA 61.344 55.000 14.30 12.47 0.00 4.02
576 583 0.179048 TGTGGCGATCATGATGGGAC 60.179 55.000 14.30 7.61 0.00 4.46
582 589 3.083686 CCACATGTGGCGATCATGA 57.916 52.632 31.13 0.00 44.73 3.07
617 624 6.942532 TTGCTCAATAGAAGAAACTGTTGT 57.057 33.333 0.00 0.00 39.09 3.32
623 630 9.899226 ACTGTTTAATTGCTCAATAGAAGAAAC 57.101 29.630 0.00 3.85 0.00 2.78
638 666 4.023193 AGGCTCGGAAACACTGTTTAATTG 60.023 41.667 7.15 1.12 0.00 2.32
640 668 3.751518 AGGCTCGGAAACACTGTTTAAT 58.248 40.909 7.15 0.00 0.00 1.40
695 724 2.038659 CTGTGTTTGGGTGGTGGAATT 58.961 47.619 0.00 0.00 0.00 2.17
702 731 1.821753 TGTCAAACTGTGTTTGGGTGG 59.178 47.619 18.98 0.00 0.00 4.61
715 744 5.288472 GTGAACCACATTGTCTTTGTCAAAC 59.712 40.000 0.00 0.00 34.08 2.93
716 745 5.406649 GTGAACCACATTGTCTTTGTCAAA 58.593 37.500 0.00 0.00 34.08 2.69
723 752 2.631160 TCGGTGAACCACATTGTCTT 57.369 45.000 0.00 0.00 35.86 3.01
742 771 1.693606 CCCTGCCACCAAAAAGTCAAT 59.306 47.619 0.00 0.00 0.00 2.57
760 789 1.223763 CGCCTACCTTTCCCTTCCC 59.776 63.158 0.00 0.00 0.00 3.97
761 790 0.178301 CTCGCCTACCTTTCCCTTCC 59.822 60.000 0.00 0.00 0.00 3.46
762 791 1.192428 TCTCGCCTACCTTTCCCTTC 58.808 55.000 0.00 0.00 0.00 3.46
763 792 1.880941 ATCTCGCCTACCTTTCCCTT 58.119 50.000 0.00 0.00 0.00 3.95
764 793 1.880941 AATCTCGCCTACCTTTCCCT 58.119 50.000 0.00 0.00 0.00 4.20
765 794 3.118519 TGTTAATCTCGCCTACCTTTCCC 60.119 47.826 0.00 0.00 0.00 3.97
781 810 5.049267 AGTTGTGGCGTTTAATCGTGTTAAT 60.049 36.000 7.69 0.00 0.00 1.40
787 816 4.309099 TCTTAGTTGTGGCGTTTAATCGT 58.691 39.130 7.69 0.00 0.00 3.73
804 833 3.604772 GCACACACACGCTTCTTTCTTAG 60.605 47.826 0.00 0.00 0.00 2.18
900 933 0.178301 GGTAAGCGGAGGGGAAGAAG 59.822 60.000 0.00 0.00 0.00 2.85
901 934 1.269703 GGGTAAGCGGAGGGGAAGAA 61.270 60.000 0.00 0.00 0.00 2.52
902 935 1.688187 GGGTAAGCGGAGGGGAAGA 60.688 63.158 0.00 0.00 0.00 2.87
903 936 2.908796 GGGTAAGCGGAGGGGAAG 59.091 66.667 0.00 0.00 0.00 3.46
904 937 3.078836 CGGGTAAGCGGAGGGGAA 61.079 66.667 0.00 0.00 0.00 3.97
905 938 4.064768 TCGGGTAAGCGGAGGGGA 62.065 66.667 0.00 0.00 0.00 4.81
955 1001 4.208686 GTAGAGGCGCACGAGGGG 62.209 72.222 10.83 0.00 0.00 4.79
1160 1211 2.165845 GAGCAGGCAATCAAGCAAGAAT 59.834 45.455 0.00 0.00 35.83 2.40
1161 1212 1.542915 GAGCAGGCAATCAAGCAAGAA 59.457 47.619 0.00 0.00 35.83 2.52
1348 1406 1.528542 CCGCGAGATCCCAGGACTA 60.529 63.158 8.23 0.00 0.00 2.59
1382 1440 3.532155 GAGGCGCCAGATCGAGGT 61.532 66.667 31.54 3.33 0.00 3.85
1433 1495 2.709170 AGACGCGGATCTGAGTAGG 58.291 57.895 12.47 0.00 0.00 3.18
1445 1507 1.083657 CACCGACAAAACAGACGCG 60.084 57.895 3.53 3.53 0.00 6.01
1456 1518 1.262950 CGACAAAAAGCATCACCGACA 59.737 47.619 0.00 0.00 0.00 4.35
1457 1519 1.399727 CCGACAAAAAGCATCACCGAC 60.400 52.381 0.00 0.00 0.00 4.79
1458 1520 0.871722 CCGACAAAAAGCATCACCGA 59.128 50.000 0.00 0.00 0.00 4.69
1459 1521 0.729140 GCCGACAAAAAGCATCACCG 60.729 55.000 0.00 0.00 0.00 4.94
1560 1648 1.529309 GGAGGATGGGAGGAGTTGC 59.471 63.158 0.00 0.00 0.00 4.17
1563 1651 1.231751 TGAGGGAGGATGGGAGGAGT 61.232 60.000 0.00 0.00 0.00 3.85
1572 1660 2.030045 GCGAGGTAGTTGAGGGAGGAT 61.030 57.143 0.00 0.00 0.00 3.24
1629 1717 2.741612 CAAAATTCAGAGCCGCAACAA 58.258 42.857 0.00 0.00 0.00 2.83
1630 1718 1.602668 GCAAAATTCAGAGCCGCAACA 60.603 47.619 0.00 0.00 0.00 3.33
1631 1719 1.063031 GCAAAATTCAGAGCCGCAAC 58.937 50.000 0.00 0.00 0.00 4.17
1637 1725 1.981533 GAACGCAGCAAAATTCAGAGC 59.018 47.619 0.00 0.00 0.00 4.09
1650 1738 0.940126 AGCTCACACTTTGAACGCAG 59.060 50.000 0.00 0.00 32.21 5.18
1653 1741 3.885484 ATTCAGCTCACACTTTGAACG 57.115 42.857 0.00 0.00 32.90 3.95
1654 1742 4.036734 TGGAATTCAGCTCACACTTTGAAC 59.963 41.667 7.93 0.00 32.90 3.18
1675 1764 9.003658 AGACACAAAACAAACTATTAGAGATGG 57.996 33.333 0.00 0.00 0.00 3.51
1737 1827 1.752501 CTTGCTCGATGTAACCGGCG 61.753 60.000 0.00 0.00 0.00 6.46
1749 1839 2.581354 CCTGGGAGGACTTGCTCG 59.419 66.667 0.00 0.00 37.67 5.03
1843 1933 0.037232 ACAGCTAGCCCGAGTTGTTC 60.037 55.000 12.13 0.00 37.59 3.18
1852 1942 1.227002 GTAGTCGCACAGCTAGCCC 60.227 63.158 12.13 0.00 0.00 5.19
1923 2034 4.574599 AGTGGTTCTGAATTGTGCTTTC 57.425 40.909 0.00 0.00 0.00 2.62
2055 2192 0.257039 AGGGAACTGCCAATAGCCTG 59.743 55.000 0.00 0.00 42.71 4.85
2189 2326 1.203758 CCGGTGACATAGTACAGTGCA 59.796 52.381 0.00 0.00 0.00 4.57
2247 2384 7.603024 GGAGGGAGTAGCATGTAACATAATAAC 59.397 40.741 0.00 0.00 0.00 1.89
2257 2394 2.029623 GAACGGAGGGAGTAGCATGTA 58.970 52.381 0.00 0.00 0.00 2.29
2258 2395 0.824759 GAACGGAGGGAGTAGCATGT 59.175 55.000 0.00 0.00 0.00 3.21
2259 2396 0.105039 GGAACGGAGGGAGTAGCATG 59.895 60.000 0.00 0.00 0.00 4.06
2261 2398 0.543410 TTGGAACGGAGGGAGTAGCA 60.543 55.000 0.00 0.00 0.00 3.49
2262 2399 0.611714 TTTGGAACGGAGGGAGTAGC 59.388 55.000 0.00 0.00 0.00 3.58
2265 2402 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2267 2404 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2268 2405 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2269 2406 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
2270 2407 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
2271 2408 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
2272 2409 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
2273 2410 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
2274 2411 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
2275 2412 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
2277 2414 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
2279 2416 9.227777 GTAGTACAAAGTTGGGTCATCTATTTT 57.772 33.333 0.00 0.00 0.00 1.82
2280 2417 8.603304 AGTAGTACAAAGTTGGGTCATCTATTT 58.397 33.333 2.52 0.00 0.00 1.40
2281 2418 8.147244 AGTAGTACAAAGTTGGGTCATCTATT 57.853 34.615 2.52 0.00 0.00 1.73
2282 2419 7.735326 AGTAGTACAAAGTTGGGTCATCTAT 57.265 36.000 2.52 0.00 0.00 1.98
2283 2420 7.549147 AAGTAGTACAAAGTTGGGTCATCTA 57.451 36.000 2.52 0.00 0.00 1.98
2284 2421 6.435292 AAGTAGTACAAAGTTGGGTCATCT 57.565 37.500 2.52 0.00 0.00 2.90
2285 2422 8.788325 AATAAGTAGTACAAAGTTGGGTCATC 57.212 34.615 2.52 0.00 0.00 2.92
2289 2426 8.158789 TGCTAAATAAGTAGTACAAAGTTGGGT 58.841 33.333 2.52 0.00 0.00 4.51
2290 2427 8.448615 GTGCTAAATAAGTAGTACAAAGTTGGG 58.551 37.037 2.52 0.00 36.87 4.12
2291 2428 8.995220 TGTGCTAAATAAGTAGTACAAAGTTGG 58.005 33.333 2.52 0.00 41.77 3.77
2292 2429 9.807386 GTGTGCTAAATAAGTAGTACAAAGTTG 57.193 33.333 2.52 0.00 44.79 3.16
2293 2430 9.550406 TGTGTGCTAAATAAGTAGTACAAAGTT 57.450 29.630 2.52 0.00 44.79 2.66
2294 2431 8.985805 GTGTGTGCTAAATAAGTAGTACAAAGT 58.014 33.333 2.52 0.00 44.79 2.66
2295 2432 8.984764 TGTGTGTGCTAAATAAGTAGTACAAAG 58.015 33.333 2.52 0.00 44.79 2.77
2297 2434 7.601130 CCTGTGTGTGCTAAATAAGTAGTACAA 59.399 37.037 2.52 0.00 44.79 2.41
2299 2436 6.035758 GCCTGTGTGTGCTAAATAAGTAGTAC 59.964 42.308 0.00 0.00 37.26 2.73
2300 2437 6.103997 GCCTGTGTGTGCTAAATAAGTAGTA 58.896 40.000 0.00 0.00 0.00 1.82
2301 2438 4.935808 GCCTGTGTGTGCTAAATAAGTAGT 59.064 41.667 0.00 0.00 0.00 2.73
2302 2439 4.935205 TGCCTGTGTGTGCTAAATAAGTAG 59.065 41.667 0.00 0.00 0.00 2.57
2305 2442 4.970662 ATGCCTGTGTGTGCTAAATAAG 57.029 40.909 0.00 0.00 0.00 1.73
2314 2453 2.753966 GCCGCTATGCCTGTGTGTG 61.754 63.158 0.00 0.00 0.00 3.82
2320 2459 0.820891 AAATGGAGCCGCTATGCCTG 60.821 55.000 0.00 0.00 0.00 4.85
2386 2525 8.635765 AAACAATCATAGTACCACAGTGATTT 57.364 30.769 0.62 0.00 31.24 2.17
2387 2526 7.064609 CGAAACAATCATAGTACCACAGTGATT 59.935 37.037 0.62 0.00 31.24 2.57
2395 2534 4.481368 AGCCGAAACAATCATAGTACCA 57.519 40.909 0.00 0.00 0.00 3.25
2412 2551 7.946655 TTCAGAGACAATATTATGTAAGCCG 57.053 36.000 0.00 0.00 32.57 5.52
2423 2562 7.582352 CATCGCATCATTTTCAGAGACAATAT 58.418 34.615 0.00 0.00 0.00 1.28
2442 2581 1.171549 TTTCAACCAGCAGCATCGCA 61.172 50.000 0.00 0.00 0.00 5.10
2444 2583 3.976793 ATATTTCAACCAGCAGCATCG 57.023 42.857 0.00 0.00 0.00 3.84
2447 2586 2.561858 TGCAATATTTCAACCAGCAGCA 59.438 40.909 0.00 0.00 0.00 4.41
2456 2595 7.933577 TGGTGGTTAAAATGTGCAATATTTCAA 59.066 29.630 9.78 1.14 36.59 2.69
2473 2612 3.178865 AGGTTAGCTAGCTGGTGGTTAA 58.821 45.455 27.68 8.66 32.15 2.01
2725 2866 3.957497 AGACACAGAGAGACACAGAACTT 59.043 43.478 0.00 0.00 0.00 2.66
2729 2870 2.887783 GGAAGACACAGAGAGACACAGA 59.112 50.000 0.00 0.00 0.00 3.41
2730 2871 2.890311 AGGAAGACACAGAGAGACACAG 59.110 50.000 0.00 0.00 0.00 3.66
2731 2872 2.887783 GAGGAAGACACAGAGAGACACA 59.112 50.000 0.00 0.00 0.00 3.72
2732 2873 2.095466 CGAGGAAGACACAGAGAGACAC 60.095 54.545 0.00 0.00 0.00 3.67
2733 2874 2.155279 CGAGGAAGACACAGAGAGACA 58.845 52.381 0.00 0.00 0.00 3.41
2734 2875 1.135517 GCGAGGAAGACACAGAGAGAC 60.136 57.143 0.00 0.00 0.00 3.36
2735 2876 1.169577 GCGAGGAAGACACAGAGAGA 58.830 55.000 0.00 0.00 0.00 3.10
2736 2877 1.135431 CAGCGAGGAAGACACAGAGAG 60.135 57.143 0.00 0.00 0.00 3.20
2906 3058 0.036306 CACTTGGGTCGCCCTTAAGT 59.964 55.000 14.76 13.26 45.70 2.24
2972 3124 7.517320 TGCCAGTGTAGTATAATGGAATTCAT 58.483 34.615 16.52 0.00 37.87 2.57
3110 3306 3.356290 GAGGGCAATTTCTGAAGGCTTA 58.644 45.455 0.00 0.00 0.00 3.09
3119 3315 2.291605 GGTAACTGGGAGGGCAATTTCT 60.292 50.000 0.00 0.00 0.00 2.52
3220 3416 5.348418 TGATTTCGAGTTTTCAGCTTCAG 57.652 39.130 0.00 0.00 0.00 3.02
3280 3476 2.369860 ACAATGGTGAGAGTTGAGCTCA 59.630 45.455 13.74 13.74 46.47 4.26
3301 3497 2.829003 CTCTCGCCACGCTCCCTA 60.829 66.667 0.00 0.00 0.00 3.53
3379 3578 4.401202 GGGGAAAATTCTTAATCTTCCGCA 59.599 41.667 13.81 0.00 44.36 5.69
3501 3713 5.256806 ACAAAAGAGGGGCAGTAAAGTAT 57.743 39.130 0.00 0.00 0.00 2.12
3520 3733 8.482128 ACCAATATTCTCAAAACAAGGAAACAA 58.518 29.630 0.00 0.00 0.00 2.83
3978 4434 7.928706 GCCTTTTATAAGAGTAGATGAGCAGAA 59.071 37.037 2.63 0.00 32.92 3.02
3988 4444 7.278868 CACCAACTCTGCCTTTTATAAGAGTAG 59.721 40.741 4.72 3.17 46.64 2.57
3989 4445 7.038587 TCACCAACTCTGCCTTTTATAAGAGTA 60.039 37.037 4.72 0.00 46.64 2.59
3991 4447 6.092807 GTCACCAACTCTGCCTTTTATAAGAG 59.907 42.308 0.00 0.00 41.59 2.85
3992 4448 5.938125 GTCACCAACTCTGCCTTTTATAAGA 59.062 40.000 0.00 0.00 32.92 2.10
3993 4449 5.163854 CGTCACCAACTCTGCCTTTTATAAG 60.164 44.000 0.00 0.00 0.00 1.73
3994 4450 4.693566 CGTCACCAACTCTGCCTTTTATAA 59.306 41.667 0.00 0.00 0.00 0.98
3995 4451 4.020928 TCGTCACCAACTCTGCCTTTTATA 60.021 41.667 0.00 0.00 0.00 0.98
3996 4452 3.074412 CGTCACCAACTCTGCCTTTTAT 58.926 45.455 0.00 0.00 0.00 1.40
3997 4453 2.103432 TCGTCACCAACTCTGCCTTTTA 59.897 45.455 0.00 0.00 0.00 1.52
3998 4454 1.134220 TCGTCACCAACTCTGCCTTTT 60.134 47.619 0.00 0.00 0.00 2.27
3999 4455 0.468226 TCGTCACCAACTCTGCCTTT 59.532 50.000 0.00 0.00 0.00 3.11
4000 4456 0.687354 ATCGTCACCAACTCTGCCTT 59.313 50.000 0.00 0.00 0.00 4.35
4001 4457 0.036952 CATCGTCACCAACTCTGCCT 60.037 55.000 0.00 0.00 0.00 4.75
4002 4458 1.021390 CCATCGTCACCAACTCTGCC 61.021 60.000 0.00 0.00 0.00 4.85
4003 4459 0.320771 ACCATCGTCACCAACTCTGC 60.321 55.000 0.00 0.00 0.00 4.26
4004 4460 1.270305 ACACCATCGTCACCAACTCTG 60.270 52.381 0.00 0.00 0.00 3.35
4005 4461 1.048601 ACACCATCGTCACCAACTCT 58.951 50.000 0.00 0.00 0.00 3.24
4006 4462 1.148310 CACACCATCGTCACCAACTC 58.852 55.000 0.00 0.00 0.00 3.01
4007 4463 0.884704 GCACACCATCGTCACCAACT 60.885 55.000 0.00 0.00 0.00 3.16
4008 4464 1.574428 GCACACCATCGTCACCAAC 59.426 57.895 0.00 0.00 0.00 3.77
4009 4465 1.599518 GGCACACCATCGTCACCAA 60.600 57.895 0.00 0.00 35.26 3.67
4010 4466 2.031919 GGCACACCATCGTCACCA 59.968 61.111 0.00 0.00 35.26 4.17
4011 4467 2.034879 CAGGCACACCATCGTCACC 61.035 63.158 0.00 0.00 39.06 4.02
4012 4468 1.291877 GACAGGCACACCATCGTCAC 61.292 60.000 0.00 0.00 39.06 3.67
4013 4469 1.005037 GACAGGCACACCATCGTCA 60.005 57.895 0.00 0.00 39.06 4.35
4014 4470 0.391661 ATGACAGGCACACCATCGTC 60.392 55.000 0.00 0.00 39.06 4.20
4015 4471 0.391661 GATGACAGGCACACCATCGT 60.392 55.000 0.00 0.00 39.06 3.73
4016 4472 1.091771 GGATGACAGGCACACCATCG 61.092 60.000 0.00 0.00 39.06 3.84
4017 4473 0.254178 AGGATGACAGGCACACCATC 59.746 55.000 4.37 0.00 39.06 3.51
4018 4474 0.034767 CAGGATGACAGGCACACCAT 60.035 55.000 4.37 0.00 39.69 3.55
4019 4475 1.376086 CAGGATGACAGGCACACCA 59.624 57.895 4.37 0.00 39.69 4.17
4020 4476 2.042831 GCAGGATGACAGGCACACC 61.043 63.158 0.00 0.00 39.69 4.16
4021 4477 0.890542 TTGCAGGATGACAGGCACAC 60.891 55.000 0.00 0.00 39.69 3.82
4022 4478 0.038599 ATTGCAGGATGACAGGCACA 59.961 50.000 0.00 0.00 39.69 4.57
4023 4479 2.042686 TATTGCAGGATGACAGGCAC 57.957 50.000 0.00 0.00 39.69 5.01
4024 4480 3.244665 CCTATATTGCAGGATGACAGGCA 60.245 47.826 0.00 0.00 39.69 4.75
4025 4481 3.341823 CCTATATTGCAGGATGACAGGC 58.658 50.000 0.00 0.00 39.69 4.85
4026 4482 3.341823 GCCTATATTGCAGGATGACAGG 58.658 50.000 0.00 0.00 39.69 4.00
4027 4483 3.341823 GGCCTATATTGCAGGATGACAG 58.658 50.000 0.00 0.00 39.69 3.51
4028 4484 2.289631 CGGCCTATATTGCAGGATGACA 60.290 50.000 0.00 0.00 39.69 3.58
4029 4485 2.289694 ACGGCCTATATTGCAGGATGAC 60.290 50.000 0.00 0.00 39.69 3.06
4030 4486 1.977854 ACGGCCTATATTGCAGGATGA 59.022 47.619 0.00 0.00 39.69 2.92
4031 4487 2.027745 AGACGGCCTATATTGCAGGATG 60.028 50.000 0.00 0.00 34.91 3.51
4032 4488 2.027745 CAGACGGCCTATATTGCAGGAT 60.028 50.000 0.00 0.00 34.91 3.24
4033 4489 1.344438 CAGACGGCCTATATTGCAGGA 59.656 52.381 0.00 0.00 34.91 3.86
4034 4490 1.344438 TCAGACGGCCTATATTGCAGG 59.656 52.381 0.00 0.00 36.16 4.85
4035 4491 2.820059 TCAGACGGCCTATATTGCAG 57.180 50.000 0.00 0.00 0.00 4.41
4036 4492 2.899900 AGATCAGACGGCCTATATTGCA 59.100 45.455 0.00 0.00 0.00 4.08
4037 4493 3.601443 AGATCAGACGGCCTATATTGC 57.399 47.619 0.00 0.00 0.00 3.56
4038 4494 8.402798 AGATATAGATCAGACGGCCTATATTG 57.597 38.462 0.00 0.00 35.87 1.90
4040 4496 9.509956 GTTAGATATAGATCAGACGGCCTATAT 57.490 37.037 0.00 4.91 37.45 0.86
4041 4497 7.656542 CGTTAGATATAGATCAGACGGCCTATA 59.343 40.741 14.12 0.00 38.20 1.31
4042 4498 6.483974 CGTTAGATATAGATCAGACGGCCTAT 59.516 42.308 14.12 0.00 38.20 2.57
4043 4499 5.816258 CGTTAGATATAGATCAGACGGCCTA 59.184 44.000 14.12 0.00 38.20 3.93
4044 4500 4.636648 CGTTAGATATAGATCAGACGGCCT 59.363 45.833 14.12 0.00 38.20 5.19
4045 4501 4.201930 CCGTTAGATATAGATCAGACGGCC 60.202 50.000 22.78 0.00 46.44 6.13
4046 4502 4.911053 CCGTTAGATATAGATCAGACGGC 58.089 47.826 22.78 0.00 46.44 5.68
4048 4504 7.171848 CCCTATCCGTTAGATATAGATCAGACG 59.828 44.444 14.68 14.68 39.95 4.18
4049 4505 8.212312 TCCCTATCCGTTAGATATAGATCAGAC 58.788 40.741 0.00 0.00 36.84 3.51
4050 4506 8.333226 TCCCTATCCGTTAGATATAGATCAGA 57.667 38.462 0.00 0.00 36.84 3.27
4051 4507 7.663905 CCTCCCTATCCGTTAGATATAGATCAG 59.336 44.444 0.00 0.00 36.84 2.90
4052 4508 7.350124 TCCTCCCTATCCGTTAGATATAGATCA 59.650 40.741 0.00 0.00 36.84 2.92
4053 4509 7.747690 TCCTCCCTATCCGTTAGATATAGATC 58.252 42.308 0.00 0.00 36.84 2.75
4054 4510 7.709024 TCCTCCCTATCCGTTAGATATAGAT 57.291 40.000 0.00 0.00 36.84 1.98
4055 4511 7.520797 TTCCTCCCTATCCGTTAGATATAGA 57.479 40.000 0.00 0.00 36.84 1.98
4056 4512 7.835181 AGTTTCCTCCCTATCCGTTAGATATAG 59.165 40.741 0.00 0.00 36.84 1.31
4057 4513 7.706674 AGTTTCCTCCCTATCCGTTAGATATA 58.293 38.462 0.00 0.00 36.84 0.86
4058 4514 6.563163 AGTTTCCTCCCTATCCGTTAGATAT 58.437 40.000 0.00 0.00 36.84 1.63
4059 4515 5.961897 AGTTTCCTCCCTATCCGTTAGATA 58.038 41.667 0.00 0.00 36.33 1.98
4060 4516 4.817286 AGTTTCCTCCCTATCCGTTAGAT 58.183 43.478 0.00 0.00 39.15 1.98
4061 4517 4.261411 AGTTTCCTCCCTATCCGTTAGA 57.739 45.455 0.00 0.00 0.00 2.10
4062 4518 5.773680 TCATAGTTTCCTCCCTATCCGTTAG 59.226 44.000 0.00 0.00 0.00 2.34
4063 4519 5.537674 GTCATAGTTTCCTCCCTATCCGTTA 59.462 44.000 0.00 0.00 0.00 3.18
4064 4520 4.344390 GTCATAGTTTCCTCCCTATCCGTT 59.656 45.833 0.00 0.00 0.00 4.44
4065 4521 3.896272 GTCATAGTTTCCTCCCTATCCGT 59.104 47.826 0.00 0.00 0.00 4.69
4066 4522 3.895656 TGTCATAGTTTCCTCCCTATCCG 59.104 47.826 0.00 0.00 0.00 4.18
4067 4523 5.888982 TTGTCATAGTTTCCTCCCTATCC 57.111 43.478 0.00 0.00 0.00 2.59
4068 4524 9.274206 GTAAATTGTCATAGTTTCCTCCCTATC 57.726 37.037 0.00 0.00 0.00 2.08
4069 4525 8.218488 GGTAAATTGTCATAGTTTCCTCCCTAT 58.782 37.037 0.00 0.00 0.00 2.57
4070 4526 7.183112 TGGTAAATTGTCATAGTTTCCTCCCTA 59.817 37.037 0.00 0.00 0.00 3.53
4071 4527 6.011981 TGGTAAATTGTCATAGTTTCCTCCCT 60.012 38.462 0.00 0.00 0.00 4.20
4072 4528 6.184789 TGGTAAATTGTCATAGTTTCCTCCC 58.815 40.000 0.00 0.00 0.00 4.30
4073 4529 6.183360 GCTGGTAAATTGTCATAGTTTCCTCC 60.183 42.308 0.00 0.00 0.00 4.30
4074 4530 6.374333 TGCTGGTAAATTGTCATAGTTTCCTC 59.626 38.462 0.00 0.00 0.00 3.71
4075 4531 6.151144 GTGCTGGTAAATTGTCATAGTTTCCT 59.849 38.462 0.00 0.00 0.00 3.36
4076 4532 6.151144 AGTGCTGGTAAATTGTCATAGTTTCC 59.849 38.462 0.00 0.00 0.00 3.13
4077 4533 7.145932 AGTGCTGGTAAATTGTCATAGTTTC 57.854 36.000 0.00 0.00 0.00 2.78
4078 4534 6.151144 GGAGTGCTGGTAAATTGTCATAGTTT 59.849 38.462 0.00 0.00 0.00 2.66
4079 4535 5.648092 GGAGTGCTGGTAAATTGTCATAGTT 59.352 40.000 0.00 0.00 0.00 2.24
4080 4536 5.045578 AGGAGTGCTGGTAAATTGTCATAGT 60.046 40.000 0.00 0.00 0.00 2.12
4081 4537 5.431765 AGGAGTGCTGGTAAATTGTCATAG 58.568 41.667 0.00 0.00 0.00 2.23
4082 4538 5.189736 AGAGGAGTGCTGGTAAATTGTCATA 59.810 40.000 0.00 0.00 0.00 2.15
4083 4539 4.018960 AGAGGAGTGCTGGTAAATTGTCAT 60.019 41.667 0.00 0.00 0.00 3.06
4084 4540 3.327757 AGAGGAGTGCTGGTAAATTGTCA 59.672 43.478 0.00 0.00 0.00 3.58
4085 4541 3.935828 GAGAGGAGTGCTGGTAAATTGTC 59.064 47.826 0.00 0.00 0.00 3.18
4086 4542 3.307762 GGAGAGGAGTGCTGGTAAATTGT 60.308 47.826 0.00 0.00 0.00 2.71
4087 4543 3.274288 GGAGAGGAGTGCTGGTAAATTG 58.726 50.000 0.00 0.00 0.00 2.32
4088 4544 2.912956 TGGAGAGGAGTGCTGGTAAATT 59.087 45.455 0.00 0.00 0.00 1.82
4089 4545 2.237392 GTGGAGAGGAGTGCTGGTAAAT 59.763 50.000 0.00 0.00 0.00 1.40
4090 4546 1.623811 GTGGAGAGGAGTGCTGGTAAA 59.376 52.381 0.00 0.00 0.00 2.01
4091 4547 1.267121 GTGGAGAGGAGTGCTGGTAA 58.733 55.000 0.00 0.00 0.00 2.85
4092 4548 0.114364 TGTGGAGAGGAGTGCTGGTA 59.886 55.000 0.00 0.00 0.00 3.25
4093 4549 0.546267 ATGTGGAGAGGAGTGCTGGT 60.546 55.000 0.00 0.00 0.00 4.00
4094 4550 0.617413 AATGTGGAGAGGAGTGCTGG 59.383 55.000 0.00 0.00 0.00 4.85
4095 4551 2.082231 CAAATGTGGAGAGGAGTGCTG 58.918 52.381 0.00 0.00 0.00 4.41
4096 4552 1.612726 GCAAATGTGGAGAGGAGTGCT 60.613 52.381 0.00 0.00 0.00 4.40
4097 4553 0.807496 GCAAATGTGGAGAGGAGTGC 59.193 55.000 0.00 0.00 0.00 4.40
4098 4554 2.082231 CTGCAAATGTGGAGAGGAGTG 58.918 52.381 0.00 0.00 45.65 3.51
4099 4555 1.980765 TCTGCAAATGTGGAGAGGAGT 59.019 47.619 2.39 0.00 46.25 3.85
4100 4556 2.775911 TCTGCAAATGTGGAGAGGAG 57.224 50.000 2.39 0.00 46.25 3.69
4105 4561 2.360165 GGCCTTATCTGCAAATGTGGAG 59.640 50.000 0.00 0.00 44.23 3.86
4106 4562 2.025037 AGGCCTTATCTGCAAATGTGGA 60.025 45.455 0.00 0.00 0.00 4.02
4107 4563 2.381911 AGGCCTTATCTGCAAATGTGG 58.618 47.619 0.00 0.00 0.00 4.17
4108 4564 3.181483 GGAAGGCCTTATCTGCAAATGTG 60.181 47.826 20.54 0.00 0.00 3.21
4109 4565 3.026694 GGAAGGCCTTATCTGCAAATGT 58.973 45.455 20.54 0.00 0.00 2.71
4110 4566 2.363359 GGGAAGGCCTTATCTGCAAATG 59.637 50.000 20.54 0.00 0.00 2.32
4111 4567 2.245806 AGGGAAGGCCTTATCTGCAAAT 59.754 45.455 20.54 0.00 0.00 2.32
4112 4568 1.640670 AGGGAAGGCCTTATCTGCAAA 59.359 47.619 20.54 0.00 0.00 3.68
4113 4569 1.212935 GAGGGAAGGCCTTATCTGCAA 59.787 52.381 20.54 0.00 0.00 4.08
4114 4570 0.839946 GAGGGAAGGCCTTATCTGCA 59.160 55.000 20.54 0.00 0.00 4.41
4115 4571 0.250081 CGAGGGAAGGCCTTATCTGC 60.250 60.000 20.54 5.12 0.00 4.26
4116 4572 1.123928 ACGAGGGAAGGCCTTATCTG 58.876 55.000 20.54 14.43 0.00 2.90
4117 4573 1.763545 GAACGAGGGAAGGCCTTATCT 59.236 52.381 20.54 18.47 0.00 1.98
4118 4574 1.485066 TGAACGAGGGAAGGCCTTATC 59.515 52.381 20.54 15.67 0.00 1.75
4119 4575 1.580059 TGAACGAGGGAAGGCCTTAT 58.420 50.000 20.54 7.60 0.00 1.73
4120 4576 1.485066 GATGAACGAGGGAAGGCCTTA 59.515 52.381 20.54 0.00 0.00 2.69
4121 4577 0.253327 GATGAACGAGGGAAGGCCTT 59.747 55.000 20.65 20.65 0.00 4.35
4122 4578 1.627297 GGATGAACGAGGGAAGGCCT 61.627 60.000 0.00 0.00 0.00 5.19
4123 4579 1.153147 GGATGAACGAGGGAAGGCC 60.153 63.158 0.00 0.00 0.00 5.19
4124 4580 0.253327 AAGGATGAACGAGGGAAGGC 59.747 55.000 0.00 0.00 0.00 4.35
4125 4581 2.789409 AAAGGATGAACGAGGGAAGG 57.211 50.000 0.00 0.00 0.00 3.46
4126 4582 3.935828 GAGAAAAGGATGAACGAGGGAAG 59.064 47.826 0.00 0.00 0.00 3.46
4127 4583 3.307480 GGAGAAAAGGATGAACGAGGGAA 60.307 47.826 0.00 0.00 0.00 3.97
4128 4584 2.236395 GGAGAAAAGGATGAACGAGGGA 59.764 50.000 0.00 0.00 0.00 4.20
4129 4585 2.633488 GGAGAAAAGGATGAACGAGGG 58.367 52.381 0.00 0.00 0.00 4.30
4130 4586 2.027192 TGGGAGAAAAGGATGAACGAGG 60.027 50.000 0.00 0.00 0.00 4.63
4131 4587 3.003480 GTGGGAGAAAAGGATGAACGAG 58.997 50.000 0.00 0.00 0.00 4.18
4132 4588 2.370519 TGTGGGAGAAAAGGATGAACGA 59.629 45.455 0.00 0.00 0.00 3.85
4133 4589 2.778299 TGTGGGAGAAAAGGATGAACG 58.222 47.619 0.00 0.00 0.00 3.95
4134 4590 4.398319 TCTTGTGGGAGAAAAGGATGAAC 58.602 43.478 0.00 0.00 0.00 3.18
4135 4591 4.722526 TCTTGTGGGAGAAAAGGATGAA 57.277 40.909 0.00 0.00 0.00 2.57
4136 4592 4.537688 AGATCTTGTGGGAGAAAAGGATGA 59.462 41.667 0.00 0.00 0.00 2.92
4137 4593 4.853007 AGATCTTGTGGGAGAAAAGGATG 58.147 43.478 0.00 0.00 0.00 3.51
4138 4594 5.014544 TCAAGATCTTGTGGGAGAAAAGGAT 59.985 40.000 29.80 0.00 41.16 3.24
4139 4595 4.350816 TCAAGATCTTGTGGGAGAAAAGGA 59.649 41.667 29.80 7.78 41.16 3.36
4140 4596 4.655963 TCAAGATCTTGTGGGAGAAAAGG 58.344 43.478 29.80 4.99 41.16 3.11
4141 4597 5.942236 TCATCAAGATCTTGTGGGAGAAAAG 59.058 40.000 29.80 9.69 41.16 2.27
4142 4598 5.879763 TCATCAAGATCTTGTGGGAGAAAA 58.120 37.500 29.80 11.86 41.16 2.29
4143 4599 5.503634 TCATCAAGATCTTGTGGGAGAAA 57.496 39.130 29.80 12.52 41.16 2.52
4144 4600 5.248640 GTTCATCAAGATCTTGTGGGAGAA 58.751 41.667 29.80 22.73 41.16 2.87
4145 4601 4.621510 CGTTCATCAAGATCTTGTGGGAGA 60.622 45.833 29.80 19.34 41.16 3.71
4146 4602 3.620374 CGTTCATCAAGATCTTGTGGGAG 59.380 47.826 29.80 17.76 41.16 4.30
4147 4603 3.599343 CGTTCATCAAGATCTTGTGGGA 58.401 45.455 29.80 22.54 41.16 4.37
4148 4604 2.096496 GCGTTCATCAAGATCTTGTGGG 59.904 50.000 29.80 20.99 41.16 4.61
4149 4605 2.743664 TGCGTTCATCAAGATCTTGTGG 59.256 45.455 29.80 23.05 41.16 4.17
4150 4606 3.722957 CGTGCGTTCATCAAGATCTTGTG 60.723 47.826 29.80 25.37 41.16 3.33
4151 4607 2.413112 CGTGCGTTCATCAAGATCTTGT 59.587 45.455 29.80 17.26 41.16 3.16
4152 4608 2.222886 CCGTGCGTTCATCAAGATCTTG 60.223 50.000 26.56 26.56 41.71 3.02
4153 4609 2.002586 CCGTGCGTTCATCAAGATCTT 58.997 47.619 0.88 0.88 0.00 2.40
4154 4610 1.204704 TCCGTGCGTTCATCAAGATCT 59.795 47.619 0.00 0.00 0.00 2.75
4155 4611 1.324736 GTCCGTGCGTTCATCAAGATC 59.675 52.381 0.00 0.00 0.00 2.75
4156 4612 1.337728 TGTCCGTGCGTTCATCAAGAT 60.338 47.619 0.00 0.00 0.00 2.40
4157 4613 0.032815 TGTCCGTGCGTTCATCAAGA 59.967 50.000 0.00 0.00 0.00 3.02
4158 4614 1.061131 GATGTCCGTGCGTTCATCAAG 59.939 52.381 15.49 0.00 37.30 3.02
4159 4615 1.075542 GATGTCCGTGCGTTCATCAA 58.924 50.000 15.49 0.00 37.30 2.57
4160 4616 0.246360 AGATGTCCGTGCGTTCATCA 59.754 50.000 19.44 3.11 39.06 3.07
4161 4617 1.061131 CAAGATGTCCGTGCGTTCATC 59.939 52.381 13.78 13.78 37.52 2.92
4162 4618 1.078709 CAAGATGTCCGTGCGTTCAT 58.921 50.000 0.00 0.00 0.00 2.57
4163 4619 1.565156 GCAAGATGTCCGTGCGTTCA 61.565 55.000 0.00 0.00 40.20 3.18
4164 4620 1.132640 GCAAGATGTCCGTGCGTTC 59.867 57.895 0.00 0.00 40.20 3.95
4165 4621 3.253955 GCAAGATGTCCGTGCGTT 58.746 55.556 0.00 0.00 40.20 4.84
4287 4743 9.667107 ACAAGTTAGCTAAATATGCTTTGTCTA 57.333 29.630 7.99 0.00 41.46 2.59
4329 4785 3.842007 TTACTTTTGAAGGTCGTGGGA 57.158 42.857 0.00 0.00 0.00 4.37
4331 4787 7.645402 AGTAAATTTACTTTTGAAGGTCGTGG 58.355 34.615 22.49 0.00 40.96 4.94
4457 4913 5.986135 AGATCTCAACCAACATAACTATCGC 59.014 40.000 0.00 0.00 0.00 4.58
4558 5016 0.478072 TTTCTTCCTGGGCAGCTCAA 59.522 50.000 0.00 0.00 0.00 3.02
4630 5088 1.067565 AGATACATGTAGATGCGGGCG 60.068 52.381 11.91 0.00 32.14 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.