Multiple sequence alignment - TraesCS2D01G038100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G038100 chr2D 100.000 9158 0 0 1 9158 14099698 14090541 0.000000e+00 16912.0
1 TraesCS2D01G038100 chr2D 98.993 298 0 2 1151 1447 14098402 14098107 1.750000e-146 531.0
2 TraesCS2D01G038100 chr2D 98.993 298 0 2 1297 1592 14098548 14098252 1.750000e-146 531.0
3 TraesCS2D01G038100 chr2D 98.052 154 0 2 1151 1303 14098258 14098107 1.960000e-66 265.0
4 TraesCS2D01G038100 chr2D 98.052 154 0 2 1441 1592 14098548 14098396 1.960000e-66 265.0
5 TraesCS2D01G038100 chr2D 100.000 100 0 0 2177 2276 14097423 14097324 1.570000e-42 185.0
6 TraesCS2D01G038100 chr2D 100.000 100 0 0 2276 2375 14097522 14097423 1.570000e-42 185.0
7 TraesCS2D01G038100 chr2B 95.681 6414 235 26 2276 8671 25600717 25594328 0.000000e+00 10272.0
8 TraesCS2D01G038100 chr2B 94.491 835 39 5 1447 2276 25601450 25600618 0.000000e+00 1280.0
9 TraesCS2D01G038100 chr2B 92.675 587 29 6 724 1303 25601883 25601304 0.000000e+00 833.0
10 TraesCS2D01G038100 chr2B 84.722 648 52 17 1 603 25602531 25601886 1.020000e-168 604.0
11 TraesCS2D01G038100 chr2B 81.661 638 56 20 1 592 287886976 287886354 2.990000e-129 473.0
12 TraesCS2D01G038100 chr2B 76.580 696 114 29 4701 5373 71364941 71364272 4.100000e-88 337.0
13 TraesCS2D01G038100 chr2B 89.272 261 23 4 79 334 244425523 244425263 1.150000e-83 322.0
14 TraesCS2D01G038100 chr2B 92.568 148 7 2 1303 1447 25601450 25601304 9.320000e-50 209.0
15 TraesCS2D01G038100 chr2A 98.225 4282 55 5 2276 6551 16470317 16466051 0.000000e+00 7467.0
16 TraesCS2D01G038100 chr2A 95.046 2402 71 21 6688 9074 16466041 16463673 0.000000e+00 3733.0
17 TraesCS2D01G038100 chr2A 89.593 1326 71 26 10 1303 16472201 16470911 0.000000e+00 1622.0
18 TraesCS2D01G038100 chr2A 94.279 839 29 9 1451 2276 16471050 16470218 0.000000e+00 1266.0
19 TraesCS2D01G038100 chr2A 75.645 698 117 28 4701 5373 48453452 48452783 1.930000e-76 298.0
20 TraesCS2D01G038100 chr3A 84.532 2935 342 55 3559 6442 739392296 739395169 0.000000e+00 2802.0
21 TraesCS2D01G038100 chr3A 84.991 1106 121 31 6499 7589 739395249 739396324 0.000000e+00 1081.0
22 TraesCS2D01G038100 chr3A 79.494 751 99 26 1529 2271 739390110 739390813 4.970000e-132 483.0
23 TraesCS2D01G038100 chr3A 87.629 388 48 0 3212 3599 739391871 739392258 1.400000e-122 451.0
24 TraesCS2D01G038100 chr3A 80.618 356 63 4 892 1242 739389724 739390078 4.210000e-68 270.0
25 TraesCS2D01G038100 chr3A 91.837 98 5 1 1567 1661 496385891 496385988 5.770000e-27 134.0
26 TraesCS2D01G038100 chr3B 84.253 2972 341 66 3559 6464 816300125 816303035 0.000000e+00 2778.0
27 TraesCS2D01G038100 chr3B 84.652 1049 124 24 6558 7589 816303240 816304268 0.000000e+00 1011.0
28 TraesCS2D01G038100 chr3B 87.629 388 48 0 3212 3599 816299700 816300087 1.400000e-122 451.0
29 TraesCS2D01G038100 chr3B 75.768 586 103 28 688 1249 816297342 816297912 9.120000e-65 259.0
30 TraesCS2D01G038100 chr3D 82.210 1765 228 46 3559 5291 606998830 607000540 0.000000e+00 1441.0
31 TraesCS2D01G038100 chr3D 88.407 1199 109 18 5289 6464 607000653 607001844 0.000000e+00 1417.0
32 TraesCS2D01G038100 chr3D 84.229 1135 129 32 6456 7577 607001870 607002967 0.000000e+00 1059.0
33 TraesCS2D01G038100 chr3D 79.650 742 105 27 1545 2271 606996637 606997347 8.260000e-135 492.0
34 TraesCS2D01G038100 chr3D 87.113 388 50 0 3212 3599 606998405 606998792 3.040000e-119 440.0
35 TraesCS2D01G038100 chr3D 78.343 531 88 20 706 1219 606996065 606996585 1.480000e-82 318.0
36 TraesCS2D01G038100 chr3D 93.636 110 7 0 8110 8219 47564285 47564176 2.050000e-36 165.0
37 TraesCS2D01G038100 chr7B 83.906 640 50 23 1 592 635149436 635148802 6.210000e-156 562.0
38 TraesCS2D01G038100 chr7B 86.200 471 44 8 1 452 129498201 129498669 2.970000e-134 490.0
39 TraesCS2D01G038100 chr7B 86.301 73 2 4 527 592 129498754 129498825 1.280000e-08 73.1
40 TraesCS2D01G038100 chr1B 83.099 639 58 17 1 592 642296288 642296923 3.760000e-148 536.0
41 TraesCS2D01G038100 chr1B 81.487 632 62 17 7 592 78192923 78192301 1.390000e-127 468.0
42 TraesCS2D01G038100 chr6B 82.473 639 62 19 1 592 616575970 616575335 1.760000e-141 514.0
43 TraesCS2D01G038100 chr4A 86.373 477 44 8 1 458 666792640 666792166 1.370000e-137 501.0
44 TraesCS2D01G038100 chr5B 82.293 593 55 17 47 592 489216612 489217201 1.390000e-127 468.0
45 TraesCS2D01G038100 chr1D 81.638 354 28 17 463 801 145884284 145884615 9.120000e-65 259.0
46 TraesCS2D01G038100 chr1D 91.818 110 9 0 8110 8219 288278868 288278759 4.430000e-33 154.0
47 TraesCS2D01G038100 chrUn 74.006 654 112 31 4707 5327 88908887 88908259 7.200000e-51 213.0
48 TraesCS2D01G038100 chr7D 92.035 113 9 0 8107 8219 577028358 577028470 9.520000e-35 159.0
49 TraesCS2D01G038100 chr6D 91.818 110 9 0 8110 8219 227947897 227947788 4.430000e-33 154.0
50 TraesCS2D01G038100 chr6A 91.837 98 4 2 1567 1661 471275746 471275650 5.770000e-27 134.0
51 TraesCS2D01G038100 chr7A 90.909 99 5 2 1567 1661 25224843 25224745 7.460000e-26 130.0
52 TraesCS2D01G038100 chr5A 90.816 98 6 1 1567 1661 374024576 374024479 2.680000e-25 128.0
53 TraesCS2D01G038100 chr5D 87.255 102 9 2 1562 1660 61850493 61850593 7.520000e-21 113.0
54 TraesCS2D01G038100 chr5D 87.255 102 8 2 1562 1660 61858788 61858887 2.700000e-20 111.0
55 TraesCS2D01G038100 chr4B 86.275 102 11 1 1562 1660 603004201 603004302 3.500000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G038100 chr2D 14090541 14099698 9157 True 2696.285714 16912 99.155714 1 9158 7 chr2D.!!$R1 9157
1 TraesCS2D01G038100 chr2B 25594328 25602531 8203 True 2639.600000 10272 92.027400 1 8671 5 chr2B.!!$R4 8670
2 TraesCS2D01G038100 chr2B 287886354 287886976 622 True 473.000000 473 81.661000 1 592 1 chr2B.!!$R3 591
3 TraesCS2D01G038100 chr2B 71364272 71364941 669 True 337.000000 337 76.580000 4701 5373 1 chr2B.!!$R1 672
4 TraesCS2D01G038100 chr2A 16463673 16472201 8528 True 3522.000000 7467 94.285750 10 9074 4 chr2A.!!$R2 9064
5 TraesCS2D01G038100 chr2A 48452783 48453452 669 True 298.000000 298 75.645000 4701 5373 1 chr2A.!!$R1 672
6 TraesCS2D01G038100 chr3A 739389724 739396324 6600 False 1017.400000 2802 83.452800 892 7589 5 chr3A.!!$F2 6697
7 TraesCS2D01G038100 chr3B 816297342 816304268 6926 False 1124.750000 2778 83.075500 688 7589 4 chr3B.!!$F1 6901
8 TraesCS2D01G038100 chr3D 606996065 607002967 6902 False 861.166667 1441 83.325333 706 7577 6 chr3D.!!$F1 6871
9 TraesCS2D01G038100 chr7B 635148802 635149436 634 True 562.000000 562 83.906000 1 592 1 chr7B.!!$R1 591
10 TraesCS2D01G038100 chr7B 129498201 129498825 624 False 281.550000 490 86.250500 1 592 2 chr7B.!!$F1 591
11 TraesCS2D01G038100 chr1B 642296288 642296923 635 False 536.000000 536 83.099000 1 592 1 chr1B.!!$F1 591
12 TraesCS2D01G038100 chr1B 78192301 78192923 622 True 468.000000 468 81.487000 7 592 1 chr1B.!!$R1 585
13 TraesCS2D01G038100 chr6B 616575335 616575970 635 True 514.000000 514 82.473000 1 592 1 chr6B.!!$R1 591
14 TraesCS2D01G038100 chr5B 489216612 489217201 589 False 468.000000 468 82.293000 47 592 1 chr5B.!!$F1 545
15 TraesCS2D01G038100 chrUn 88908259 88908887 628 True 213.000000 213 74.006000 4707 5327 1 chrUn.!!$R1 620

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
391 432 1.453197 CCCGGCCATTCTGTAACCC 60.453 63.158 2.24 0.0 0.00 4.11 F
1337 1480 0.169672 ATGTCGACAGCAATGCAAGC 59.830 50.000 24.41 6.4 0.00 4.01 F
1481 1624 0.169672 ATGTCGACAGCAATGCAAGC 59.830 50.000 24.41 6.4 0.00 4.01 F
1483 1626 0.239347 GTCGACAGCAATGCAAGCTT 59.761 50.000 11.55 0.0 41.14 3.74 F
1721 1866 1.204704 TGGACTTCAGCCATAGACGTG 59.795 52.381 0.00 0.0 0.00 4.49 F
2546 2720 1.550524 TCAGCAGCTTTACCGACATCT 59.449 47.619 0.00 0.0 0.00 2.90 F
4379 4871 1.876799 CAGTGGGTTGCGTGTGATAAA 59.123 47.619 0.00 0.0 0.00 1.40 F
6010 6692 1.135689 CAGTGAATGCAAGGCCGTTAC 60.136 52.381 0.00 0.0 0.00 2.50 F
7281 8109 0.443869 CTCAAACAGGCGGACAATCG 59.556 55.000 0.00 0.0 0.00 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1318 1461 0.169672 GCTTGCATTGCTGTCGACAT 59.830 50.000 20.40 0.09 0.00 3.06 R
2546 2720 0.474854 TCCCAAGCTGTCCTGGGTAA 60.475 55.000 18.75 0.27 42.09 2.85 R
2628 2862 6.017934 TGAGGTCAAGATTGAAAGTTCGAAAG 60.018 38.462 0.00 0.00 39.21 2.62 R
2965 3203 6.039047 AGCATCACCTGATACAATTTGATCAC 59.961 38.462 2.79 0.00 32.63 3.06 R
3557 3948 5.160641 CCATTTTCATAACACAACCCTTCG 58.839 41.667 0.00 0.00 0.00 3.79 R
4494 4986 2.355132 CAGCAGATGACTCCAGCAAATC 59.645 50.000 0.00 0.00 0.00 2.17 R
6564 7380 2.565841 GCAGATAGTTACAAGGGCCTG 58.434 52.381 6.92 3.83 0.00 4.85 R
7907 8744 1.615883 TGAGTGAGTGAGCAGAAGTCC 59.384 52.381 0.00 0.00 0.00 3.85 R
9121 9971 0.037975 GAGGAGCAAACGACCGGTTA 60.038 55.000 9.42 0.00 38.08 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.204244 AACCCCAACCCCGATCCT 60.204 61.111 0.00 0.00 0.00 3.24
33 34 2.577059 GATCCTCGCGGTCCACAA 59.423 61.111 6.13 0.00 0.00 3.33
85 92 2.874780 CCGCGACCGAGACGAAAG 60.875 66.667 8.23 0.00 36.29 2.62
240 263 1.609501 CCCCTCACTTCTCCGTGGA 60.610 63.158 0.00 0.00 35.63 4.02
391 432 1.453197 CCCGGCCATTCTGTAACCC 60.453 63.158 2.24 0.00 0.00 4.11
396 437 1.653151 GCCATTCTGTAACCCGAGTC 58.347 55.000 0.00 0.00 0.00 3.36
411 452 3.430929 CCCGAGTCTTAACTGAATGAGGG 60.431 52.174 0.00 0.00 35.28 4.30
481 543 8.860128 GCATTGCTGATTGAATATGAATGTATG 58.140 33.333 0.16 0.00 0.00 2.39
633 706 4.081087 TGTCCCTTATCAGTGGCTAGTTTC 60.081 45.833 0.00 0.00 0.00 2.78
638 711 5.525378 CCTTATCAGTGGCTAGTTTCATGTC 59.475 44.000 0.00 0.00 0.00 3.06
639 712 2.959516 TCAGTGGCTAGTTTCATGTCG 58.040 47.619 0.00 0.00 0.00 4.35
642 715 3.859961 CAGTGGCTAGTTTCATGTCGTAG 59.140 47.826 0.00 0.00 0.00 3.51
650 723 7.491696 GGCTAGTTTCATGTCGTAGATTTTAGT 59.508 37.037 0.00 0.00 40.67 2.24
677 750 8.255111 AGGAGGAAAAATTTCAGTTCTTTCAT 57.745 30.769 8.06 0.00 38.92 2.57
678 751 8.146412 AGGAGGAAAAATTTCAGTTCTTTCATG 58.854 33.333 8.06 0.00 38.92 3.07
680 753 8.877808 AGGAAAAATTTCAGTTCTTTCATGTC 57.122 30.769 8.06 0.00 38.92 3.06
683 756 9.445786 GAAAAATTTCAGTTCTTTCATGTCGTA 57.554 29.630 1.11 0.00 37.15 3.43
684 757 9.450807 AAAAATTTCAGTTCTTTCATGTCGTAG 57.549 29.630 0.00 0.00 0.00 3.51
686 759 8.553459 AATTTCAGTTCTTTCATGTCGTAGAT 57.447 30.769 0.00 0.00 40.67 1.98
765 856 2.057137 AAGGCTGAAGTGCTTGTTGA 57.943 45.000 0.00 0.00 0.00 3.18
769 860 2.159462 GGCTGAAGTGCTTGTTGATAGC 60.159 50.000 0.00 0.00 39.10 2.97
801 892 2.892334 CTCGGTGGTTGGCGTGTTG 61.892 63.158 0.00 0.00 0.00 3.33
802 893 3.206246 CGGTGGTTGGCGTGTTGT 61.206 61.111 0.00 0.00 0.00 3.32
804 896 2.115911 GGTGGTTGGCGTGTTGTGA 61.116 57.895 0.00 0.00 0.00 3.58
860 954 4.023707 ACCGATTATCTAATGCTGCTTTGC 60.024 41.667 10.66 0.00 0.00 3.68
861 955 4.146719 CGATTATCTAATGCTGCTTTGCG 58.853 43.478 10.66 2.83 35.36 4.85
870 964 3.906014 TGCTGCTTTGCGTTGTATTAA 57.094 38.095 0.00 0.00 35.36 1.40
875 969 7.698628 TGCTGCTTTGCGTTGTATTAATATAA 58.301 30.769 0.00 0.00 35.36 0.98
1131 1232 9.607333 AATATGGATTCAGATACTTCTCCAGTA 57.393 33.333 0.00 0.00 42.49 2.74
1176 1285 6.817765 ATGTAAGTACTGAAACCACCAATG 57.182 37.500 0.00 0.00 0.00 2.82
1191 1300 1.068402 CCAATGTCGACAGCAATGCAA 60.068 47.619 24.41 0.00 0.00 4.08
1301 1444 9.973246 GTATACATTGTTGTGTACTTGAGAATG 57.027 33.333 0.00 3.33 43.36 2.67
1302 1445 8.846943 ATACATTGTTGTGTACTTGAGAATGA 57.153 30.769 14.75 4.83 37.40 2.57
1303 1446 7.194607 ACATTGTTGTGTACTTGAGAATGAG 57.805 36.000 14.75 0.00 33.85 2.90
1304 1447 6.767902 ACATTGTTGTGTACTTGAGAATGAGT 59.232 34.615 14.75 0.00 33.85 3.41
1305 1448 7.931407 ACATTGTTGTGTACTTGAGAATGAGTA 59.069 33.333 14.75 0.00 33.85 2.59
1306 1449 7.709269 TTGTTGTGTACTTGAGAATGAGTAC 57.291 36.000 6.69 6.69 45.28 2.73
1307 1450 7.050970 TGTTGTGTACTTGAGAATGAGTACT 57.949 36.000 13.01 0.00 45.29 2.73
1308 1451 6.923508 TGTTGTGTACTTGAGAATGAGTACTG 59.076 38.462 0.00 0.00 45.29 2.74
1309 1452 6.894339 TGTGTACTTGAGAATGAGTACTGA 57.106 37.500 0.00 0.00 45.29 3.41
1310 1453 7.284919 TGTGTACTTGAGAATGAGTACTGAA 57.715 36.000 0.00 0.00 45.29 3.02
1311 1454 7.722363 TGTGTACTTGAGAATGAGTACTGAAA 58.278 34.615 0.00 0.00 45.29 2.69
1312 1455 7.652105 TGTGTACTTGAGAATGAGTACTGAAAC 59.348 37.037 0.00 5.50 45.29 2.78
1313 1456 7.116519 GTGTACTTGAGAATGAGTACTGAAACC 59.883 40.741 0.00 0.00 45.29 3.27
1314 1457 6.174720 ACTTGAGAATGAGTACTGAAACCA 57.825 37.500 0.00 0.00 0.00 3.67
1315 1458 5.992217 ACTTGAGAATGAGTACTGAAACCAC 59.008 40.000 0.00 0.00 0.00 4.16
1316 1459 4.894784 TGAGAATGAGTACTGAAACCACC 58.105 43.478 0.00 0.00 0.00 4.61
1317 1460 4.346709 TGAGAATGAGTACTGAAACCACCA 59.653 41.667 0.00 0.00 0.00 4.17
1318 1461 5.163248 TGAGAATGAGTACTGAAACCACCAA 60.163 40.000 0.00 0.00 0.00 3.67
1319 1462 5.880901 AGAATGAGTACTGAAACCACCAAT 58.119 37.500 0.00 0.00 0.00 3.16
1320 1463 5.707298 AGAATGAGTACTGAAACCACCAATG 59.293 40.000 0.00 0.00 0.00 2.82
1321 1464 4.431416 TGAGTACTGAAACCACCAATGT 57.569 40.909 0.00 0.00 0.00 2.71
1322 1465 4.385825 TGAGTACTGAAACCACCAATGTC 58.614 43.478 0.00 0.00 0.00 3.06
1323 1466 3.399330 AGTACTGAAACCACCAATGTCG 58.601 45.455 0.00 0.00 0.00 4.35
1324 1467 2.631160 ACTGAAACCACCAATGTCGA 57.369 45.000 0.00 0.00 0.00 4.20
1325 1468 2.218603 ACTGAAACCACCAATGTCGAC 58.781 47.619 9.11 9.11 0.00 4.20
1326 1469 2.217750 CTGAAACCACCAATGTCGACA 58.782 47.619 22.48 22.48 0.00 4.35
1327 1470 2.217750 TGAAACCACCAATGTCGACAG 58.782 47.619 24.41 12.88 0.00 3.51
1328 1471 0.951558 AAACCACCAATGTCGACAGC 59.048 50.000 24.41 0.00 0.00 4.40
1329 1472 0.179032 AACCACCAATGTCGACAGCA 60.179 50.000 24.41 0.00 0.00 4.41
1330 1473 0.179032 ACCACCAATGTCGACAGCAA 60.179 50.000 24.41 0.00 0.00 3.91
1331 1474 1.167851 CCACCAATGTCGACAGCAAT 58.832 50.000 24.41 3.69 0.00 3.56
1332 1475 1.135603 CCACCAATGTCGACAGCAATG 60.136 52.381 24.41 17.77 0.00 2.82
1333 1476 0.523072 ACCAATGTCGACAGCAATGC 59.477 50.000 24.41 0.00 0.00 3.56
1334 1477 0.522626 CCAATGTCGACAGCAATGCA 59.477 50.000 24.41 0.00 0.00 3.96
1335 1478 1.068402 CCAATGTCGACAGCAATGCAA 60.068 47.619 24.41 0.00 0.00 4.08
1336 1479 2.247637 CAATGTCGACAGCAATGCAAG 58.752 47.619 24.41 1.58 0.00 4.01
1337 1480 0.169672 ATGTCGACAGCAATGCAAGC 59.830 50.000 24.41 6.40 0.00 4.01
1338 1481 0.886043 TGTCGACAGCAATGCAAGCT 60.886 50.000 15.76 10.87 44.62 3.74
1339 1482 0.239347 GTCGACAGCAATGCAAGCTT 59.761 50.000 11.55 0.00 41.14 3.74
1340 1483 1.464608 GTCGACAGCAATGCAAGCTTA 59.535 47.619 11.55 0.00 41.14 3.09
1341 1484 2.096496 GTCGACAGCAATGCAAGCTTAT 59.904 45.455 11.55 6.10 41.14 1.73
1342 1485 2.749076 TCGACAGCAATGCAAGCTTATT 59.251 40.909 13.67 0.00 41.14 1.40
1343 1486 3.103738 CGACAGCAATGCAAGCTTATTC 58.896 45.455 13.67 9.81 41.14 1.75
1344 1487 3.181503 CGACAGCAATGCAAGCTTATTCT 60.182 43.478 13.67 0.00 41.14 2.40
1345 1488 4.034394 CGACAGCAATGCAAGCTTATTCTA 59.966 41.667 13.67 0.00 41.14 2.10
1346 1489 5.447683 CGACAGCAATGCAAGCTTATTCTAA 60.448 40.000 13.67 0.00 41.14 2.10
1347 1490 6.461110 ACAGCAATGCAAGCTTATTCTAAT 57.539 33.333 13.67 0.00 41.14 1.73
1348 1491 7.518848 CGACAGCAATGCAAGCTTATTCTAATA 60.519 37.037 13.67 0.00 41.14 0.98
1349 1492 7.646314 ACAGCAATGCAAGCTTATTCTAATAG 58.354 34.615 13.67 2.78 41.14 1.73
1350 1493 6.581542 CAGCAATGCAAGCTTATTCTAATAGC 59.418 38.462 13.67 0.00 41.14 2.97
1351 1494 6.263842 AGCAATGCAAGCTTATTCTAATAGCA 59.736 34.615 8.35 1.13 39.87 3.49
1352 1495 6.919662 GCAATGCAAGCTTATTCTAATAGCAA 59.080 34.615 0.00 0.00 32.83 3.91
1353 1496 7.597743 GCAATGCAAGCTTATTCTAATAGCAAT 59.402 33.333 0.00 0.00 32.83 3.56
1354 1497 8.912658 CAATGCAAGCTTATTCTAATAGCAATG 58.087 33.333 0.00 0.84 32.83 2.82
1355 1498 6.973843 TGCAAGCTTATTCTAATAGCAATGG 58.026 36.000 0.00 0.00 0.00 3.16
1356 1499 6.547141 TGCAAGCTTATTCTAATAGCAATGGT 59.453 34.615 0.00 0.00 0.00 3.55
1357 1500 7.068593 TGCAAGCTTATTCTAATAGCAATGGTT 59.931 33.333 0.00 0.00 0.00 3.67
1358 1501 8.567948 GCAAGCTTATTCTAATAGCAATGGTTA 58.432 33.333 0.00 0.00 0.00 2.85
1359 1502 9.884465 CAAGCTTATTCTAATAGCAATGGTTAC 57.116 33.333 0.00 0.00 0.00 2.50
1360 1503 9.627123 AAGCTTATTCTAATAGCAATGGTTACA 57.373 29.630 0.00 0.00 0.00 2.41
1361 1504 9.799106 AGCTTATTCTAATAGCAATGGTTACAT 57.201 29.630 0.00 0.00 39.54 2.29
1375 1518 7.849322 AATGGTTACATTGTAGGTCCTTTTT 57.151 32.000 0.00 5.31 45.27 1.94
1398 1541 8.442632 TTTTCCTAGCTATGTTGATGAATCTG 57.557 34.615 0.00 0.00 0.00 2.90
1399 1542 6.737720 TCCTAGCTATGTTGATGAATCTGT 57.262 37.500 0.00 0.00 0.00 3.41
1400 1543 6.753180 TCCTAGCTATGTTGATGAATCTGTC 58.247 40.000 0.00 0.00 0.00 3.51
1401 1544 6.324770 TCCTAGCTATGTTGATGAATCTGTCA 59.675 38.462 0.00 0.00 41.67 3.58
1445 1588 9.973246 GTATACATTGTTGTGTACTTGAGAATG 57.027 33.333 0.00 3.33 43.36 2.67
1446 1589 8.846943 ATACATTGTTGTGTACTTGAGAATGA 57.153 30.769 14.75 4.83 37.40 2.57
1447 1590 7.194607 ACATTGTTGTGTACTTGAGAATGAG 57.805 36.000 14.75 0.00 33.85 2.90
1448 1591 6.767902 ACATTGTTGTGTACTTGAGAATGAGT 59.232 34.615 14.75 0.00 33.85 3.41
1449 1592 7.931407 ACATTGTTGTGTACTTGAGAATGAGTA 59.069 33.333 14.75 0.00 33.85 2.59
1450 1593 7.709269 TTGTTGTGTACTTGAGAATGAGTAC 57.291 36.000 6.69 6.69 45.28 2.73
1451 1594 7.050970 TGTTGTGTACTTGAGAATGAGTACT 57.949 36.000 13.01 0.00 45.29 2.73
1452 1595 6.923508 TGTTGTGTACTTGAGAATGAGTACTG 59.076 38.462 0.00 0.00 45.29 2.74
1453 1596 6.894339 TGTGTACTTGAGAATGAGTACTGA 57.106 37.500 0.00 0.00 45.29 3.41
1454 1597 7.284919 TGTGTACTTGAGAATGAGTACTGAA 57.715 36.000 0.00 0.00 45.29 3.02
1455 1598 7.722363 TGTGTACTTGAGAATGAGTACTGAAA 58.278 34.615 0.00 0.00 45.29 2.69
1456 1599 7.652105 TGTGTACTTGAGAATGAGTACTGAAAC 59.348 37.037 0.00 5.50 45.29 2.78
1457 1600 7.116519 GTGTACTTGAGAATGAGTACTGAAACC 59.883 40.741 0.00 0.00 45.29 3.27
1458 1601 6.174720 ACTTGAGAATGAGTACTGAAACCA 57.825 37.500 0.00 0.00 0.00 3.67
1459 1602 5.992217 ACTTGAGAATGAGTACTGAAACCAC 59.008 40.000 0.00 0.00 0.00 4.16
1460 1603 4.894784 TGAGAATGAGTACTGAAACCACC 58.105 43.478 0.00 0.00 0.00 4.61
1461 1604 4.346709 TGAGAATGAGTACTGAAACCACCA 59.653 41.667 0.00 0.00 0.00 4.17
1462 1605 5.163248 TGAGAATGAGTACTGAAACCACCAA 60.163 40.000 0.00 0.00 0.00 3.67
1463 1606 5.880901 AGAATGAGTACTGAAACCACCAAT 58.119 37.500 0.00 0.00 0.00 3.16
1464 1607 5.707298 AGAATGAGTACTGAAACCACCAATG 59.293 40.000 0.00 0.00 0.00 2.82
1465 1608 4.431416 TGAGTACTGAAACCACCAATGT 57.569 40.909 0.00 0.00 0.00 2.71
1466 1609 4.385825 TGAGTACTGAAACCACCAATGTC 58.614 43.478 0.00 0.00 0.00 3.06
1467 1610 3.399330 AGTACTGAAACCACCAATGTCG 58.601 45.455 0.00 0.00 0.00 4.35
1468 1611 2.631160 ACTGAAACCACCAATGTCGA 57.369 45.000 0.00 0.00 0.00 4.20
1469 1612 2.218603 ACTGAAACCACCAATGTCGAC 58.781 47.619 9.11 9.11 0.00 4.20
1470 1613 2.217750 CTGAAACCACCAATGTCGACA 58.782 47.619 22.48 22.48 0.00 4.35
1471 1614 2.217750 TGAAACCACCAATGTCGACAG 58.782 47.619 24.41 12.88 0.00 3.51
1472 1615 0.951558 AAACCACCAATGTCGACAGC 59.048 50.000 24.41 0.00 0.00 4.40
1473 1616 0.179032 AACCACCAATGTCGACAGCA 60.179 50.000 24.41 0.00 0.00 4.41
1474 1617 0.179032 ACCACCAATGTCGACAGCAA 60.179 50.000 24.41 0.00 0.00 3.91
1475 1618 1.167851 CCACCAATGTCGACAGCAAT 58.832 50.000 24.41 3.69 0.00 3.56
1476 1619 1.135603 CCACCAATGTCGACAGCAATG 60.136 52.381 24.41 17.77 0.00 2.82
1477 1620 0.523072 ACCAATGTCGACAGCAATGC 59.477 50.000 24.41 0.00 0.00 3.56
1478 1621 0.522626 CCAATGTCGACAGCAATGCA 59.477 50.000 24.41 0.00 0.00 3.96
1479 1622 1.068402 CCAATGTCGACAGCAATGCAA 60.068 47.619 24.41 0.00 0.00 4.08
1480 1623 2.247637 CAATGTCGACAGCAATGCAAG 58.752 47.619 24.41 1.58 0.00 4.01
1481 1624 0.169672 ATGTCGACAGCAATGCAAGC 59.830 50.000 24.41 6.40 0.00 4.01
1482 1625 0.886043 TGTCGACAGCAATGCAAGCT 60.886 50.000 15.76 10.87 44.62 3.74
1483 1626 0.239347 GTCGACAGCAATGCAAGCTT 59.761 50.000 11.55 0.00 41.14 3.74
1484 1627 1.464608 GTCGACAGCAATGCAAGCTTA 59.535 47.619 11.55 0.00 41.14 3.09
1485 1628 2.096496 GTCGACAGCAATGCAAGCTTAT 59.904 45.455 11.55 6.10 41.14 1.73
1486 1629 2.749076 TCGACAGCAATGCAAGCTTATT 59.251 40.909 13.67 0.00 41.14 1.40
1487 1630 3.103738 CGACAGCAATGCAAGCTTATTC 58.896 45.455 13.67 9.81 41.14 1.75
1488 1631 3.181503 CGACAGCAATGCAAGCTTATTCT 60.182 43.478 13.67 0.00 41.14 2.40
1489 1632 4.034394 CGACAGCAATGCAAGCTTATTCTA 59.966 41.667 13.67 0.00 41.14 2.10
1490 1633 5.447683 CGACAGCAATGCAAGCTTATTCTAA 60.448 40.000 13.67 0.00 41.14 2.10
1491 1634 6.461110 ACAGCAATGCAAGCTTATTCTAAT 57.539 33.333 13.67 0.00 41.14 1.73
1492 1635 7.518848 CGACAGCAATGCAAGCTTATTCTAATA 60.519 37.037 13.67 0.00 41.14 0.98
1493 1636 7.646314 ACAGCAATGCAAGCTTATTCTAATAG 58.354 34.615 13.67 2.78 41.14 1.73
1494 1637 6.581542 CAGCAATGCAAGCTTATTCTAATAGC 59.418 38.462 13.67 0.00 41.14 2.97
1495 1638 6.263842 AGCAATGCAAGCTTATTCTAATAGCA 59.736 34.615 8.35 1.13 39.87 3.49
1496 1639 6.919662 GCAATGCAAGCTTATTCTAATAGCAA 59.080 34.615 0.00 0.00 32.83 3.91
1497 1640 7.597743 GCAATGCAAGCTTATTCTAATAGCAAT 59.402 33.333 0.00 0.00 32.83 3.56
1498 1641 8.912658 CAATGCAAGCTTATTCTAATAGCAATG 58.087 33.333 0.00 0.84 32.83 2.82
1499 1642 6.973843 TGCAAGCTTATTCTAATAGCAATGG 58.026 36.000 0.00 0.00 0.00 3.16
1500 1643 6.547141 TGCAAGCTTATTCTAATAGCAATGGT 59.453 34.615 0.00 0.00 0.00 3.55
1501 1644 7.068593 TGCAAGCTTATTCTAATAGCAATGGTT 59.931 33.333 0.00 0.00 0.00 3.67
1502 1645 8.567948 GCAAGCTTATTCTAATAGCAATGGTTA 58.432 33.333 0.00 0.00 0.00 2.85
1503 1646 9.884465 CAAGCTTATTCTAATAGCAATGGTTAC 57.116 33.333 0.00 0.00 0.00 2.50
1504 1647 9.627123 AAGCTTATTCTAATAGCAATGGTTACA 57.373 29.630 0.00 0.00 0.00 2.41
1505 1648 9.799106 AGCTTATTCTAATAGCAATGGTTACAT 57.201 29.630 0.00 0.00 39.54 2.29
1519 1662 7.849322 AATGGTTACATTGTAGGTCCTTTTT 57.151 32.000 0.00 5.31 45.27 1.94
1542 1685 8.442632 TTTTCCTAGCTATGTTGATGAATCTG 57.557 34.615 0.00 0.00 0.00 2.90
1543 1686 6.737720 TCCTAGCTATGTTGATGAATCTGT 57.262 37.500 0.00 0.00 0.00 3.41
1544 1687 6.753180 TCCTAGCTATGTTGATGAATCTGTC 58.247 40.000 0.00 0.00 0.00 3.51
1545 1688 6.324770 TCCTAGCTATGTTGATGAATCTGTCA 59.675 38.462 0.00 0.00 41.67 3.58
1721 1866 1.204704 TGGACTTCAGCCATAGACGTG 59.795 52.381 0.00 0.00 0.00 4.49
1808 1964 8.995027 TGAAACCCATGCATAGTAGATAATTT 57.005 30.769 0.00 0.00 0.00 1.82
2096 2256 2.030027 ATTGTCCCTGACCTCACTCA 57.970 50.000 0.00 0.00 0.00 3.41
2276 2442 3.857052 TGTACTCATGGAATTCGGTCAC 58.143 45.455 0.00 0.00 0.00 3.67
2278 2444 2.977914 ACTCATGGAATTCGGTCACTG 58.022 47.619 0.00 0.00 0.00 3.66
2279 2445 2.303022 ACTCATGGAATTCGGTCACTGT 59.697 45.455 0.00 0.00 0.00 3.55
2280 2446 3.244561 ACTCATGGAATTCGGTCACTGTT 60.245 43.478 0.00 0.00 0.00 3.16
2281 2447 3.750371 TCATGGAATTCGGTCACTGTTT 58.250 40.909 0.00 0.00 0.00 2.83
2282 2448 3.501828 TCATGGAATTCGGTCACTGTTTG 59.498 43.478 0.00 0.00 0.00 2.93
2283 2449 2.925724 TGGAATTCGGTCACTGTTTGT 58.074 42.857 0.00 0.00 0.00 2.83
2284 2450 2.875933 TGGAATTCGGTCACTGTTTGTC 59.124 45.455 0.00 0.00 0.00 3.18
2285 2451 2.875933 GGAATTCGGTCACTGTTTGTCA 59.124 45.455 0.00 0.00 0.00 3.58
2286 2452 3.314080 GGAATTCGGTCACTGTTTGTCAA 59.686 43.478 0.00 0.00 0.00 3.18
2287 2453 4.023193 GGAATTCGGTCACTGTTTGTCAAT 60.023 41.667 0.00 0.00 0.00 2.57
2288 2454 3.961477 TTCGGTCACTGTTTGTCAATG 57.039 42.857 0.00 0.00 0.00 2.82
2289 2455 2.912771 TCGGTCACTGTTTGTCAATGT 58.087 42.857 0.00 0.00 0.00 2.71
2290 2456 3.275143 TCGGTCACTGTTTGTCAATGTT 58.725 40.909 0.00 0.00 0.00 2.71
2291 2457 3.692101 TCGGTCACTGTTTGTCAATGTTT 59.308 39.130 0.00 0.00 0.00 2.83
2292 2458 4.876679 TCGGTCACTGTTTGTCAATGTTTA 59.123 37.500 0.00 0.00 0.00 2.01
2293 2459 5.354513 TCGGTCACTGTTTGTCAATGTTTAA 59.645 36.000 0.00 0.00 0.00 1.52
2294 2460 5.681105 CGGTCACTGTTTGTCAATGTTTAAG 59.319 40.000 0.00 0.00 0.00 1.85
2295 2461 5.458779 GGTCACTGTTTGTCAATGTTTAAGC 59.541 40.000 0.00 0.00 0.00 3.09
2296 2462 6.265577 GTCACTGTTTGTCAATGTTTAAGCT 58.734 36.000 0.00 0.00 0.00 3.74
2297 2463 7.414436 GTCACTGTTTGTCAATGTTTAAGCTA 58.586 34.615 0.00 0.00 0.00 3.32
2298 2464 8.076178 GTCACTGTTTGTCAATGTTTAAGCTAT 58.924 33.333 0.00 0.00 0.00 2.97
2299 2465 8.629158 TCACTGTTTGTCAATGTTTAAGCTATT 58.371 29.630 0.00 0.00 0.00 1.73
2300 2466 8.905702 CACTGTTTGTCAATGTTTAAGCTATTC 58.094 33.333 0.00 0.00 0.00 1.75
2301 2467 8.850156 ACTGTTTGTCAATGTTTAAGCTATTCT 58.150 29.630 0.00 0.00 0.00 2.40
2302 2468 9.683069 CTGTTTGTCAATGTTTAAGCTATTCTT 57.317 29.630 0.00 0.00 38.79 2.52
2303 2469 9.462174 TGTTTGTCAATGTTTAAGCTATTCTTG 57.538 29.630 0.00 0.00 36.25 3.02
2304 2470 9.463443 GTTTGTCAATGTTTAAGCTATTCTTGT 57.537 29.630 0.00 0.00 36.25 3.16
2323 2489 9.974980 ATTCTTGTAATTTGTTATGTTTTCCGT 57.025 25.926 0.00 0.00 0.00 4.69
2324 2490 9.804758 TTCTTGTAATTTGTTATGTTTTCCGTT 57.195 25.926 0.00 0.00 0.00 4.44
2325 2491 9.453325 TCTTGTAATTTGTTATGTTTTCCGTTC 57.547 29.630 0.00 0.00 0.00 3.95
2326 2492 9.239002 CTTGTAATTTGTTATGTTTTCCGTTCA 57.761 29.630 0.00 0.00 0.00 3.18
2327 2493 9.751542 TTGTAATTTGTTATGTTTTCCGTTCAT 57.248 25.926 0.00 0.00 0.00 2.57
2328 2494 9.186323 TGTAATTTGTTATGTTTTCCGTTCATG 57.814 29.630 0.00 0.00 0.00 3.07
2329 2495 7.650834 AATTTGTTATGTTTTCCGTTCATGG 57.349 32.000 0.00 0.00 0.00 3.66
2330 2496 5.776173 TTGTTATGTTTTCCGTTCATGGT 57.224 34.783 0.00 0.00 0.00 3.55
2331 2497 6.879276 TTGTTATGTTTTCCGTTCATGGTA 57.121 33.333 0.00 0.00 0.00 3.25
2332 2498 6.243811 TGTTATGTTTTCCGTTCATGGTAC 57.756 37.500 0.00 0.00 0.00 3.34
2333 2499 5.998981 TGTTATGTTTTCCGTTCATGGTACT 59.001 36.000 0.00 0.00 0.00 2.73
2334 2500 6.072948 TGTTATGTTTTCCGTTCATGGTACTG 60.073 38.462 0.00 0.00 0.00 2.74
2335 2501 3.811083 TGTTTTCCGTTCATGGTACTGT 58.189 40.909 0.00 0.00 0.00 3.55
2336 2502 4.200874 TGTTTTCCGTTCATGGTACTGTT 58.799 39.130 0.00 0.00 0.00 3.16
2337 2503 5.366460 TGTTTTCCGTTCATGGTACTGTTA 58.634 37.500 0.00 0.00 0.00 2.41
2338 2504 5.236911 TGTTTTCCGTTCATGGTACTGTTAC 59.763 40.000 0.00 0.00 0.00 2.50
2339 2505 4.877378 TTCCGTTCATGGTACTGTTACT 57.123 40.909 0.00 0.00 0.00 2.24
2340 2506 4.182693 TCCGTTCATGGTACTGTTACTG 57.817 45.455 0.00 0.00 0.00 2.74
2341 2507 3.575256 TCCGTTCATGGTACTGTTACTGT 59.425 43.478 0.00 0.00 0.00 3.55
2342 2508 4.039488 TCCGTTCATGGTACTGTTACTGTT 59.961 41.667 0.00 0.00 0.00 3.16
2343 2509 5.243507 TCCGTTCATGGTACTGTTACTGTTA 59.756 40.000 0.00 0.00 0.00 2.41
2344 2510 5.575606 CCGTTCATGGTACTGTTACTGTTAG 59.424 44.000 0.00 0.00 0.00 2.34
2345 2511 6.384224 CGTTCATGGTACTGTTACTGTTAGA 58.616 40.000 0.00 0.00 0.00 2.10
2425 2599 6.613755 TGACTTGCTAACACCTACTTTTTC 57.386 37.500 0.00 0.00 0.00 2.29
2546 2720 1.550524 TCAGCAGCTTTACCGACATCT 59.449 47.619 0.00 0.00 0.00 2.90
2628 2862 5.344743 TCAGGGTGAGTTAAGATGATCAC 57.655 43.478 0.00 0.00 41.03 3.06
2932 3170 7.907214 ACCTTGACTTGAGTTATGTATGAAC 57.093 36.000 0.00 0.00 0.00 3.18
3100 3338 2.578021 ACAACAGATATTCCACTGGCCT 59.422 45.455 3.32 0.00 38.30 5.19
4379 4871 1.876799 CAGTGGGTTGCGTGTGATAAA 59.123 47.619 0.00 0.00 0.00 1.40
4494 4986 5.690865 AGGAGAAGGATAGCGGAGATATAG 58.309 45.833 0.00 0.00 40.19 1.31
4554 5046 5.925509 AGTTACCAAGAACTAAACTGAGCA 58.074 37.500 0.00 0.00 37.90 4.26
4924 5427 5.633830 TGTTGCATTTCAGGATCTTCTTC 57.366 39.130 0.00 0.00 0.00 2.87
5285 5840 1.818674 ACAAATCGAAGGTGATTGGGC 59.181 47.619 0.00 0.00 38.54 5.36
6010 6692 1.135689 CAGTGAATGCAAGGCCGTTAC 60.136 52.381 0.00 0.00 0.00 2.50
6564 7380 3.179830 CACGTATTATCATCTAGCGCCC 58.820 50.000 2.29 0.00 0.00 6.13
6582 7398 2.127708 CCCAGGCCCTTGTAACTATCT 58.872 52.381 0.00 0.00 0.00 1.98
6638 7461 7.041916 TGTCATTCAAATTGCAAAATGGACTTC 60.042 33.333 17.35 7.60 31.53 3.01
6681 7504 6.884280 ATTTCTCAGTTTTTGTTCCTCGAT 57.116 33.333 0.00 0.00 0.00 3.59
6682 7505 7.979444 ATTTCTCAGTTTTTGTTCCTCGATA 57.021 32.000 0.00 0.00 0.00 2.92
6683 7506 7.795482 TTTCTCAGTTTTTGTTCCTCGATAA 57.205 32.000 0.00 0.00 0.00 1.75
6684 7507 7.795482 TTCTCAGTTTTTGTTCCTCGATAAA 57.205 32.000 0.00 0.00 0.00 1.40
6685 7508 7.979444 TCTCAGTTTTTGTTCCTCGATAAAT 57.021 32.000 0.00 0.00 0.00 1.40
6738 7561 3.308438 ACTGATGATGTTTTTGCCTGC 57.692 42.857 0.00 0.00 0.00 4.85
7281 8109 0.443869 CTCAAACAGGCGGACAATCG 59.556 55.000 0.00 0.00 0.00 3.34
7341 8169 5.828299 TTAAGTCTCAGTTTTGTGTTGGG 57.172 39.130 0.00 0.00 0.00 4.12
7347 8175 3.357203 TCAGTTTTGTGTTGGGCTGTTA 58.643 40.909 0.00 0.00 0.00 2.41
7591 8426 9.883142 TTTTTGTATTGTTTGGAATATGATCCC 57.117 29.630 0.00 0.00 38.82 3.85
7739 8576 9.098355 GCTGTTACATACTAATGAACTTCATGA 57.902 33.333 4.99 0.00 37.15 3.07
7907 8744 3.192001 CAGGAATTGTGTCTTCATGTGGG 59.808 47.826 0.00 0.00 31.60 4.61
7995 8832 4.492791 TTCATGCTTCATCCGCATTATG 57.507 40.909 0.00 0.00 45.18 1.90
8004 8841 0.749091 TCCGCATTATGCAGCTGCTT 60.749 50.000 36.61 31.97 45.36 3.91
8071 8908 5.549742 TCTTGGGCTTTGTGATGATTTTT 57.450 34.783 0.00 0.00 0.00 1.94
8072 8909 5.540911 TCTTGGGCTTTGTGATGATTTTTC 58.459 37.500 0.00 0.00 0.00 2.29
8079 8916 6.366061 GGCTTTGTGATGATTTTTCCTGTAAC 59.634 38.462 0.00 0.00 0.00 2.50
8091 8928 6.648879 TTTTCCTGTAACTCCATTTTCAGG 57.351 37.500 0.00 0.00 40.03 3.86
8100 8937 8.167392 TGTAACTCCATTTTCAGGGATCTAAAA 58.833 33.333 0.00 0.00 31.57 1.52
8102 8939 7.032598 ACTCCATTTTCAGGGATCTAAAAGA 57.967 36.000 0.00 0.00 31.57 2.52
8158 8998 1.409241 CCTGTGCCATGGAATGCTAGT 60.409 52.381 18.40 0.00 44.97 2.57
8175 9015 6.313519 TGCTAGTGGATCAGAAATTAACCT 57.686 37.500 0.00 0.00 0.00 3.50
8233 9073 4.925061 ATGCAATAAATTGTTGTTGGCG 57.075 36.364 4.48 0.00 39.88 5.69
8334 9177 0.237498 GTTTCGCCGGTTTTCCTGAG 59.763 55.000 1.90 0.00 37.95 3.35
8341 9184 2.143925 CCGGTTTTCCTGAGACTTGTC 58.856 52.381 0.00 0.00 37.95 3.18
8355 9198 0.320421 CTTGTCGGAAGAAGGCGGAA 60.320 55.000 0.00 0.00 45.01 4.30
8402 9247 8.545472 ACAAATGTAGTGGTGTAGGTACAATAT 58.455 33.333 0.00 0.00 38.04 1.28
8423 9268 9.283768 CAATATACCTGTATATGTTTCCTGCAA 57.716 33.333 9.88 0.00 38.40 4.08
8747 9596 9.603921 AAATGGGCAAGATAACAAATAATTGAG 57.396 29.630 0.00 0.00 38.94 3.02
8890 9739 2.669434 GCGTGAAACTGGCGACTTAATA 59.331 45.455 0.00 0.00 31.75 0.98
8945 9794 5.310451 AGGATAGGCAAACAGTTTAACGAA 58.690 37.500 0.00 0.00 0.00 3.85
8950 9799 9.221775 GATAGGCAAACAGTTTAACGAATTATG 57.778 33.333 0.00 0.00 0.00 1.90
8965 9814 7.076842 ACGAATTATGGACAAACAAGATGAG 57.923 36.000 0.00 0.00 0.00 2.90
9001 9850 4.082245 TCAAGGCCTTAATTTACAAGCTGC 60.082 41.667 20.00 0.00 0.00 5.25
9019 9868 2.246841 CGCAGCACCTCACAAATGA 58.753 52.632 0.00 0.00 0.00 2.57
9064 9914 4.410400 GGGCCAGGTTCAGTCCCG 62.410 72.222 4.39 0.00 0.00 5.14
9081 9931 2.754658 GGGAACGGAGGAGCTCGA 60.755 66.667 7.83 0.00 0.00 4.04
9082 9932 2.490685 GGAACGGAGGAGCTCGAC 59.509 66.667 7.83 3.89 0.00 4.20
9083 9933 2.490685 GAACGGAGGAGCTCGACC 59.509 66.667 7.83 12.26 0.00 4.79
9085 9935 3.914579 AACGGAGGAGCTCGACCGA 62.915 63.158 37.77 0.00 46.94 4.69
9086 9936 2.902846 CGGAGGAGCTCGACCGAT 60.903 66.667 32.13 7.04 46.94 4.18
9087 9937 2.725008 GGAGGAGCTCGACCGATG 59.275 66.667 7.83 0.00 0.00 3.84
9088 9938 1.824329 GGAGGAGCTCGACCGATGA 60.824 63.158 7.83 0.00 0.00 2.92
9089 9939 1.357334 GAGGAGCTCGACCGATGAC 59.643 63.158 7.83 0.00 0.00 3.06
9090 9940 2.024871 GGAGCTCGACCGATGACG 59.975 66.667 7.83 0.00 39.43 4.35
9107 9957 7.326877 CGATGACGGTAGAAATTATGAAGAG 57.673 40.000 0.00 0.00 35.72 2.85
9108 9958 7.139392 CGATGACGGTAGAAATTATGAAGAGA 58.861 38.462 0.00 0.00 35.72 3.10
9109 9959 7.810282 CGATGACGGTAGAAATTATGAAGAGAT 59.190 37.037 0.00 0.00 35.72 2.75
9110 9960 9.482627 GATGACGGTAGAAATTATGAAGAGATT 57.517 33.333 0.00 0.00 0.00 2.40
9111 9961 8.648557 TGACGGTAGAAATTATGAAGAGATTG 57.351 34.615 0.00 0.00 0.00 2.67
9112 9962 7.224753 TGACGGTAGAAATTATGAAGAGATTGC 59.775 37.037 0.00 0.00 0.00 3.56
9113 9963 7.275920 ACGGTAGAAATTATGAAGAGATTGCT 58.724 34.615 0.00 0.00 0.00 3.91
9114 9964 7.770897 ACGGTAGAAATTATGAAGAGATTGCTT 59.229 33.333 0.00 0.00 0.00 3.91
9115 9965 8.279103 CGGTAGAAATTATGAAGAGATTGCTTC 58.721 37.037 0.00 0.00 43.53 3.86
9125 9975 6.415798 GAAGAGATTGCTTCAAGAGTAACC 57.584 41.667 0.00 0.00 42.92 2.85
9126 9976 4.499183 AGAGATTGCTTCAAGAGTAACCG 58.501 43.478 0.00 0.00 32.58 4.44
9127 9977 3.600388 AGATTGCTTCAAGAGTAACCGG 58.400 45.455 0.00 0.00 32.58 5.28
9128 9978 2.922740 TTGCTTCAAGAGTAACCGGT 57.077 45.000 0.00 0.00 0.00 5.28
9129 9979 2.450609 TGCTTCAAGAGTAACCGGTC 57.549 50.000 8.04 0.00 0.00 4.79
9130 9980 1.336517 TGCTTCAAGAGTAACCGGTCG 60.337 52.381 8.04 0.00 0.00 4.79
9131 9981 1.336609 GCTTCAAGAGTAACCGGTCGT 60.337 52.381 8.04 0.00 0.00 4.34
9132 9982 2.865276 GCTTCAAGAGTAACCGGTCGTT 60.865 50.000 8.04 0.00 38.57 3.85
9133 9983 3.387397 CTTCAAGAGTAACCGGTCGTTT 58.613 45.455 8.04 0.00 35.79 3.60
9134 9984 2.746269 TCAAGAGTAACCGGTCGTTTG 58.254 47.619 8.04 9.12 35.79 2.93
9135 9985 1.193874 CAAGAGTAACCGGTCGTTTGC 59.806 52.381 8.04 0.00 35.79 3.68
9136 9986 0.677842 AGAGTAACCGGTCGTTTGCT 59.322 50.000 8.04 0.00 35.79 3.91
9137 9987 1.066136 GAGTAACCGGTCGTTTGCTC 58.934 55.000 8.04 6.99 35.79 4.26
9138 9988 0.320160 AGTAACCGGTCGTTTGCTCC 60.320 55.000 8.04 0.00 35.79 4.70
9139 9989 0.320160 GTAACCGGTCGTTTGCTCCT 60.320 55.000 8.04 0.00 35.79 3.69
9140 9990 0.037975 TAACCGGTCGTTTGCTCCTC 60.038 55.000 8.04 0.00 35.79 3.71
9141 9991 1.755393 AACCGGTCGTTTGCTCCTCT 61.755 55.000 8.04 0.00 0.00 3.69
9142 9992 1.738099 CCGGTCGTTTGCTCCTCTG 60.738 63.158 0.00 0.00 0.00 3.35
9143 9993 2.383527 CGGTCGTTTGCTCCTCTGC 61.384 63.158 0.00 0.00 0.00 4.26
9144 9994 1.004440 GGTCGTTTGCTCCTCTGCT 60.004 57.895 0.00 0.00 0.00 4.24
9145 9995 1.016653 GGTCGTTTGCTCCTCTGCTC 61.017 60.000 0.00 0.00 0.00 4.26
9146 9996 1.080501 TCGTTTGCTCCTCTGCTCG 60.081 57.895 0.00 0.00 0.00 5.03
9147 9997 2.097038 CGTTTGCTCCTCTGCTCGG 61.097 63.158 0.00 0.00 0.00 4.63
9148 9998 1.743252 GTTTGCTCCTCTGCTCGGG 60.743 63.158 0.00 0.00 0.00 5.14
9149 9999 2.959484 TTTGCTCCTCTGCTCGGGG 61.959 63.158 0.00 0.00 0.00 5.73
9150 10000 3.905153 TTGCTCCTCTGCTCGGGGA 62.905 63.158 0.00 0.00 0.00 4.81
9151 10001 3.535962 GCTCCTCTGCTCGGGGAG 61.536 72.222 15.66 15.66 46.65 4.30
9155 10005 2.837291 CTCTGCTCGGGGAGGAGG 60.837 72.222 3.14 2.26 45.93 4.30
9156 10006 3.347590 TCTGCTCGGGGAGGAGGA 61.348 66.667 3.14 0.00 45.93 3.71
9157 10007 2.837291 CTGCTCGGGGAGGAGGAG 60.837 72.222 0.00 0.00 42.97 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.380302 GGTGGAGGCTTGTGATGGT 59.620 57.895 0.00 0.00 0.00 3.55
85 92 0.965866 GGGTTAGGGTTTGCTCTGCC 60.966 60.000 0.00 0.00 0.00 4.85
335 362 1.352352 ACCAACAATCACAGCCTAGCT 59.648 47.619 0.00 0.00 40.77 3.32
336 363 1.740025 GACCAACAATCACAGCCTAGC 59.260 52.381 0.00 0.00 0.00 3.42
391 432 4.177026 CACCCTCATTCAGTTAAGACTCG 58.823 47.826 0.00 0.00 32.54 4.18
396 437 3.071874 TGCCACCCTCATTCAGTTAAG 57.928 47.619 0.00 0.00 0.00 1.85
411 452 5.760253 ACTAGTATACAATCAGCAATGCCAC 59.240 40.000 0.00 0.00 0.00 5.01
481 543 7.578852 AGTAACAAAATGTACGACCTTAAAGC 58.421 34.615 0.00 0.00 0.00 3.51
562 624 3.765511 AGCAAGAAGATTGGCATGCTAAA 59.234 39.130 20.95 14.10 41.92 1.85
565 627 1.848652 AGCAAGAAGATTGGCATGCT 58.151 45.000 18.92 3.78 39.16 3.79
566 628 2.667473 AAGCAAGAAGATTGGCATGC 57.333 45.000 9.90 9.90 0.00 4.06
611 684 4.081087 TGAAACTAGCCACTGATAAGGGAC 60.081 45.833 0.00 0.00 0.00 4.46
633 706 7.713750 TCCTCCTAACTAAAATCTACGACATG 58.286 38.462 0.00 0.00 0.00 3.21
650 723 9.196139 TGAAAGAACTGAAATTTTTCCTCCTAA 57.804 29.630 0.00 0.00 36.36 2.69
677 750 5.756347 AGCACACAAACTAAAATCTACGACA 59.244 36.000 0.00 0.00 0.00 4.35
678 751 6.224420 AGCACACAAACTAAAATCTACGAC 57.776 37.500 0.00 0.00 0.00 4.34
680 753 5.339611 GCAAGCACACAAACTAAAATCTACG 59.660 40.000 0.00 0.00 0.00 3.51
683 756 5.163519 ACAGCAAGCACACAAACTAAAATCT 60.164 36.000 0.00 0.00 0.00 2.40
684 757 5.043248 ACAGCAAGCACACAAACTAAAATC 58.957 37.500 0.00 0.00 0.00 2.17
686 759 4.448537 ACAGCAAGCACACAAACTAAAA 57.551 36.364 0.00 0.00 0.00 1.52
765 856 1.532316 GCCCCACATGCATGGCTAT 60.532 57.895 29.41 6.68 40.77 2.97
769 860 3.214123 CGAGCCCCACATGCATGG 61.214 66.667 29.41 15.39 39.71 3.66
801 892 6.347644 GCTCCATTTTGCCAAGTAAAAATCAC 60.348 38.462 0.00 0.00 34.55 3.06
802 893 5.700373 GCTCCATTTTGCCAAGTAAAAATCA 59.300 36.000 0.00 0.00 34.55 2.57
804 896 5.868454 AGCTCCATTTTGCCAAGTAAAAAT 58.132 33.333 0.00 0.00 36.63 1.82
889 983 6.937465 GGGGCAAATGGTAATAAACAAGAAAA 59.063 34.615 0.00 0.00 0.00 2.29
890 984 6.468543 GGGGCAAATGGTAATAAACAAGAAA 58.531 36.000 0.00 0.00 0.00 2.52
1131 1232 4.696899 TCTATGTTTGATCACGAGACGT 57.303 40.909 0.00 0.00 42.36 4.34
1176 1285 0.239347 AAGCTTGCATTGCTGTCGAC 59.761 50.000 9.11 9.11 41.03 4.20
1191 1300 9.799106 ATGTAACCATTGCTATTAGAATAAGCT 57.201 29.630 0.00 0.00 0.00 3.74
1279 1421 6.767902 ACTCATTCTCAAGTACACAACAATGT 59.232 34.615 0.00 0.00 41.61 2.71
1295 1438 4.894784 TGGTGGTTTCAGTACTCATTCTC 58.105 43.478 0.00 0.00 0.00 2.87
1296 1439 4.974645 TGGTGGTTTCAGTACTCATTCT 57.025 40.909 0.00 0.00 0.00 2.40
1297 1440 5.473504 ACATTGGTGGTTTCAGTACTCATTC 59.526 40.000 0.00 0.00 0.00 2.67
1298 1441 5.385198 ACATTGGTGGTTTCAGTACTCATT 58.615 37.500 0.00 0.00 0.00 2.57
1299 1442 4.985538 ACATTGGTGGTTTCAGTACTCAT 58.014 39.130 0.00 0.00 0.00 2.90
1300 1443 4.385825 GACATTGGTGGTTTCAGTACTCA 58.614 43.478 0.00 0.00 0.00 3.41
1301 1444 3.432252 CGACATTGGTGGTTTCAGTACTC 59.568 47.826 0.00 0.00 0.00 2.59
1302 1445 3.070446 TCGACATTGGTGGTTTCAGTACT 59.930 43.478 0.00 0.00 0.00 2.73
1303 1446 3.185797 GTCGACATTGGTGGTTTCAGTAC 59.814 47.826 11.55 0.00 0.00 2.73
1304 1447 3.181464 TGTCGACATTGGTGGTTTCAGTA 60.181 43.478 15.76 0.00 0.00 2.74
1305 1448 2.218603 GTCGACATTGGTGGTTTCAGT 58.781 47.619 11.55 0.00 0.00 3.41
1306 1449 2.217750 TGTCGACATTGGTGGTTTCAG 58.782 47.619 15.76 0.00 0.00 3.02
1307 1450 2.217750 CTGTCGACATTGGTGGTTTCA 58.782 47.619 20.40 0.00 0.00 2.69
1308 1451 1.069227 GCTGTCGACATTGGTGGTTTC 60.069 52.381 20.40 0.00 0.00 2.78
1309 1452 0.951558 GCTGTCGACATTGGTGGTTT 59.048 50.000 20.40 0.00 0.00 3.27
1310 1453 0.179032 TGCTGTCGACATTGGTGGTT 60.179 50.000 20.40 0.00 0.00 3.67
1311 1454 0.179032 TTGCTGTCGACATTGGTGGT 60.179 50.000 20.40 0.00 0.00 4.16
1312 1455 1.135603 CATTGCTGTCGACATTGGTGG 60.136 52.381 20.40 7.31 0.00 4.61
1313 1456 1.730121 GCATTGCTGTCGACATTGGTG 60.730 52.381 20.40 16.10 0.00 4.17
1314 1457 0.523072 GCATTGCTGTCGACATTGGT 59.477 50.000 20.40 3.22 0.00 3.67
1315 1458 0.522626 TGCATTGCTGTCGACATTGG 59.477 50.000 20.40 8.92 0.00 3.16
1316 1459 2.247637 CTTGCATTGCTGTCGACATTG 58.752 47.619 20.40 14.81 0.00 2.82
1317 1460 1.401931 GCTTGCATTGCTGTCGACATT 60.402 47.619 20.40 1.54 0.00 2.71
1318 1461 0.169672 GCTTGCATTGCTGTCGACAT 59.830 50.000 20.40 0.09 0.00 3.06
1319 1462 0.886043 AGCTTGCATTGCTGTCGACA 60.886 50.000 18.88 18.88 39.56 4.35
1320 1463 0.239347 AAGCTTGCATTGCTGTCGAC 59.761 50.000 9.11 9.11 41.03 4.20
1321 1464 1.807139 TAAGCTTGCATTGCTGTCGA 58.193 45.000 9.86 0.00 41.03 4.20
1322 1465 2.838386 ATAAGCTTGCATTGCTGTCG 57.162 45.000 9.86 0.00 41.03 4.35
1323 1466 4.367386 AGAATAAGCTTGCATTGCTGTC 57.633 40.909 9.86 11.90 41.03 3.51
1324 1467 5.902613 TTAGAATAAGCTTGCATTGCTGT 57.097 34.783 9.86 8.21 41.03 4.40
1325 1468 6.581542 GCTATTAGAATAAGCTTGCATTGCTG 59.418 38.462 9.86 4.17 41.03 4.41
1326 1469 6.263842 TGCTATTAGAATAAGCTTGCATTGCT 59.736 34.615 9.86 8.66 43.32 3.91
1327 1470 6.441274 TGCTATTAGAATAAGCTTGCATTGC 58.559 36.000 9.86 0.46 0.00 3.56
1328 1471 8.912658 CATTGCTATTAGAATAAGCTTGCATTG 58.087 33.333 9.86 9.25 0.00 2.82
1329 1472 8.086522 CCATTGCTATTAGAATAAGCTTGCATT 58.913 33.333 9.86 1.02 0.00 3.56
1330 1473 7.232127 ACCATTGCTATTAGAATAAGCTTGCAT 59.768 33.333 9.86 0.00 0.00 3.96
1331 1474 6.547141 ACCATTGCTATTAGAATAAGCTTGCA 59.453 34.615 9.86 3.53 0.00 4.08
1332 1475 6.974965 ACCATTGCTATTAGAATAAGCTTGC 58.025 36.000 9.86 0.49 0.00 4.01
1333 1476 9.884465 GTAACCATTGCTATTAGAATAAGCTTG 57.116 33.333 9.86 0.00 0.00 4.01
1334 1477 9.627123 TGTAACCATTGCTATTAGAATAAGCTT 57.373 29.630 3.48 3.48 0.00 3.74
1335 1478 9.799106 ATGTAACCATTGCTATTAGAATAAGCT 57.201 29.630 0.00 0.00 0.00 3.74
1351 1494 7.849322 AAAAAGGACCTACAATGTAACCATT 57.151 32.000 0.00 5.27 42.03 3.16
1372 1515 8.896744 CAGATTCATCAACATAGCTAGGAAAAA 58.103 33.333 13.23 0.00 0.00 1.94
1373 1516 8.049117 ACAGATTCATCAACATAGCTAGGAAAA 58.951 33.333 13.23 0.00 0.00 2.29
1374 1517 7.568349 ACAGATTCATCAACATAGCTAGGAAA 58.432 34.615 13.23 0.00 0.00 3.13
1375 1518 7.129457 ACAGATTCATCAACATAGCTAGGAA 57.871 36.000 13.23 0.00 0.00 3.36
1376 1519 6.324770 TGACAGATTCATCAACATAGCTAGGA 59.675 38.462 13.23 1.03 0.00 2.94
1377 1520 6.519382 TGACAGATTCATCAACATAGCTAGG 58.481 40.000 3.34 3.34 0.00 3.02
1378 1521 8.496751 CAATGACAGATTCATCAACATAGCTAG 58.503 37.037 0.00 0.00 44.86 3.42
1379 1522 7.989170 ACAATGACAGATTCATCAACATAGCTA 59.011 33.333 0.00 0.00 44.86 3.32
1380 1523 6.827251 ACAATGACAGATTCATCAACATAGCT 59.173 34.615 0.00 0.00 44.86 3.32
1381 1524 7.024340 ACAATGACAGATTCATCAACATAGC 57.976 36.000 0.00 0.00 44.86 2.97
1382 1525 8.671028 TGAACAATGACAGATTCATCAACATAG 58.329 33.333 0.00 0.00 44.86 2.23
1383 1526 8.564509 TGAACAATGACAGATTCATCAACATA 57.435 30.769 0.00 0.00 44.86 2.29
1384 1527 7.457024 TGAACAATGACAGATTCATCAACAT 57.543 32.000 0.00 0.00 44.86 2.71
1385 1528 6.880942 TGAACAATGACAGATTCATCAACA 57.119 33.333 0.00 0.00 44.86 3.33
1388 1531 9.623000 AGAATATGAACAATGACAGATTCATCA 57.377 29.630 22.10 0.00 44.86 3.07
1419 1562 9.973246 CATTCTCAAGTACACAACAATGTATAC 57.027 33.333 0.00 0.00 39.28 1.47
1420 1563 9.936759 TCATTCTCAAGTACACAACAATGTATA 57.063 29.630 0.00 0.00 37.82 1.47
1421 1564 8.846943 TCATTCTCAAGTACACAACAATGTAT 57.153 30.769 0.00 0.00 37.82 2.29
1422 1565 7.931407 ACTCATTCTCAAGTACACAACAATGTA 59.069 33.333 0.00 0.00 37.82 2.29
1423 1566 6.767902 ACTCATTCTCAAGTACACAACAATGT 59.232 34.615 0.00 0.00 41.61 2.71
1424 1567 7.194607 ACTCATTCTCAAGTACACAACAATG 57.805 36.000 0.00 0.00 0.00 2.82
1425 1568 8.150945 AGTACTCATTCTCAAGTACACAACAAT 58.849 33.333 13.40 0.00 46.66 2.71
1426 1569 7.438160 CAGTACTCATTCTCAAGTACACAACAA 59.562 37.037 13.40 0.00 46.66 2.83
1427 1570 6.923508 CAGTACTCATTCTCAAGTACACAACA 59.076 38.462 13.40 0.00 46.66 3.33
1428 1571 7.145985 TCAGTACTCATTCTCAAGTACACAAC 58.854 38.462 13.40 0.00 46.66 3.32
1429 1572 7.284919 TCAGTACTCATTCTCAAGTACACAA 57.715 36.000 13.40 0.00 46.66 3.33
1430 1573 6.894339 TCAGTACTCATTCTCAAGTACACA 57.106 37.500 13.40 0.00 46.66 3.72
1431 1574 7.116519 GGTTTCAGTACTCATTCTCAAGTACAC 59.883 40.741 13.40 4.59 46.66 2.90
1432 1575 7.152645 GGTTTCAGTACTCATTCTCAAGTACA 58.847 38.462 13.40 0.00 46.66 2.90
1433 1576 7.116519 GTGGTTTCAGTACTCATTCTCAAGTAC 59.883 40.741 0.00 4.85 45.30 2.73
1434 1577 7.152645 GTGGTTTCAGTACTCATTCTCAAGTA 58.847 38.462 0.00 0.00 0.00 2.24
1435 1578 5.992217 GTGGTTTCAGTACTCATTCTCAAGT 59.008 40.000 0.00 0.00 0.00 3.16
1436 1579 5.409826 GGTGGTTTCAGTACTCATTCTCAAG 59.590 44.000 0.00 0.00 0.00 3.02
1437 1580 5.163248 TGGTGGTTTCAGTACTCATTCTCAA 60.163 40.000 0.00 0.00 0.00 3.02
1438 1581 4.346709 TGGTGGTTTCAGTACTCATTCTCA 59.653 41.667 0.00 0.00 0.00 3.27
1439 1582 4.894784 TGGTGGTTTCAGTACTCATTCTC 58.105 43.478 0.00 0.00 0.00 2.87
1440 1583 4.974645 TGGTGGTTTCAGTACTCATTCT 57.025 40.909 0.00 0.00 0.00 2.40
1441 1584 5.473504 ACATTGGTGGTTTCAGTACTCATTC 59.526 40.000 0.00 0.00 0.00 2.67
1442 1585 5.385198 ACATTGGTGGTTTCAGTACTCATT 58.615 37.500 0.00 0.00 0.00 2.57
1443 1586 4.985538 ACATTGGTGGTTTCAGTACTCAT 58.014 39.130 0.00 0.00 0.00 2.90
1444 1587 4.385825 GACATTGGTGGTTTCAGTACTCA 58.614 43.478 0.00 0.00 0.00 3.41
1445 1588 3.432252 CGACATTGGTGGTTTCAGTACTC 59.568 47.826 0.00 0.00 0.00 2.59
1446 1589 3.070446 TCGACATTGGTGGTTTCAGTACT 59.930 43.478 0.00 0.00 0.00 2.73
1447 1590 3.185797 GTCGACATTGGTGGTTTCAGTAC 59.814 47.826 11.55 0.00 0.00 2.73
1448 1591 3.181464 TGTCGACATTGGTGGTTTCAGTA 60.181 43.478 15.76 0.00 0.00 2.74
1449 1592 2.218603 GTCGACATTGGTGGTTTCAGT 58.781 47.619 11.55 0.00 0.00 3.41
1450 1593 2.217750 TGTCGACATTGGTGGTTTCAG 58.782 47.619 15.76 0.00 0.00 3.02
1451 1594 2.217750 CTGTCGACATTGGTGGTTTCA 58.782 47.619 20.40 0.00 0.00 2.69
1452 1595 1.069227 GCTGTCGACATTGGTGGTTTC 60.069 52.381 20.40 0.00 0.00 2.78
1453 1596 0.951558 GCTGTCGACATTGGTGGTTT 59.048 50.000 20.40 0.00 0.00 3.27
1454 1597 0.179032 TGCTGTCGACATTGGTGGTT 60.179 50.000 20.40 0.00 0.00 3.67
1455 1598 0.179032 TTGCTGTCGACATTGGTGGT 60.179 50.000 20.40 0.00 0.00 4.16
1456 1599 1.135603 CATTGCTGTCGACATTGGTGG 60.136 52.381 20.40 7.31 0.00 4.61
1457 1600 1.730121 GCATTGCTGTCGACATTGGTG 60.730 52.381 20.40 16.10 0.00 4.17
1458 1601 0.523072 GCATTGCTGTCGACATTGGT 59.477 50.000 20.40 3.22 0.00 3.67
1459 1602 0.522626 TGCATTGCTGTCGACATTGG 59.477 50.000 20.40 8.92 0.00 3.16
1460 1603 2.247637 CTTGCATTGCTGTCGACATTG 58.752 47.619 20.40 14.81 0.00 2.82
1461 1604 1.401931 GCTTGCATTGCTGTCGACATT 60.402 47.619 20.40 1.54 0.00 2.71
1462 1605 0.169672 GCTTGCATTGCTGTCGACAT 59.830 50.000 20.40 0.09 0.00 3.06
1463 1606 0.886043 AGCTTGCATTGCTGTCGACA 60.886 50.000 18.88 18.88 39.56 4.35
1464 1607 0.239347 AAGCTTGCATTGCTGTCGAC 59.761 50.000 9.11 9.11 41.03 4.20
1465 1608 1.807139 TAAGCTTGCATTGCTGTCGA 58.193 45.000 9.86 0.00 41.03 4.20
1466 1609 2.838386 ATAAGCTTGCATTGCTGTCG 57.162 45.000 9.86 0.00 41.03 4.35
1467 1610 4.367386 AGAATAAGCTTGCATTGCTGTC 57.633 40.909 9.86 11.90 41.03 3.51
1468 1611 5.902613 TTAGAATAAGCTTGCATTGCTGT 57.097 34.783 9.86 8.21 41.03 4.40
1469 1612 6.581542 GCTATTAGAATAAGCTTGCATTGCTG 59.418 38.462 9.86 4.17 41.03 4.41
1470 1613 6.263842 TGCTATTAGAATAAGCTTGCATTGCT 59.736 34.615 9.86 8.66 43.32 3.91
1471 1614 6.441274 TGCTATTAGAATAAGCTTGCATTGC 58.559 36.000 9.86 0.46 0.00 3.56
1472 1615 8.912658 CATTGCTATTAGAATAAGCTTGCATTG 58.087 33.333 9.86 9.25 0.00 2.82
1473 1616 8.086522 CCATTGCTATTAGAATAAGCTTGCATT 58.913 33.333 9.86 1.02 0.00 3.56
1474 1617 7.232127 ACCATTGCTATTAGAATAAGCTTGCAT 59.768 33.333 9.86 0.00 0.00 3.96
1475 1618 6.547141 ACCATTGCTATTAGAATAAGCTTGCA 59.453 34.615 9.86 3.53 0.00 4.08
1476 1619 6.974965 ACCATTGCTATTAGAATAAGCTTGC 58.025 36.000 9.86 0.49 0.00 4.01
1477 1620 9.884465 GTAACCATTGCTATTAGAATAAGCTTG 57.116 33.333 9.86 0.00 0.00 4.01
1478 1621 9.627123 TGTAACCATTGCTATTAGAATAAGCTT 57.373 29.630 3.48 3.48 0.00 3.74
1479 1622 9.799106 ATGTAACCATTGCTATTAGAATAAGCT 57.201 29.630 0.00 0.00 0.00 3.74
1495 1638 7.849322 AAAAAGGACCTACAATGTAACCATT 57.151 32.000 0.00 5.27 42.03 3.16
1516 1659 8.896744 CAGATTCATCAACATAGCTAGGAAAAA 58.103 33.333 13.23 0.00 0.00 1.94
1517 1660 8.049117 ACAGATTCATCAACATAGCTAGGAAAA 58.951 33.333 13.23 0.00 0.00 2.29
1518 1661 7.568349 ACAGATTCATCAACATAGCTAGGAAA 58.432 34.615 13.23 0.00 0.00 3.13
1519 1662 7.129457 ACAGATTCATCAACATAGCTAGGAA 57.871 36.000 13.23 0.00 0.00 3.36
1520 1663 6.324770 TGACAGATTCATCAACATAGCTAGGA 59.675 38.462 13.23 1.03 0.00 2.94
1521 1664 6.519382 TGACAGATTCATCAACATAGCTAGG 58.481 40.000 3.34 3.34 0.00 3.02
1522 1665 8.496751 CAATGACAGATTCATCAACATAGCTAG 58.503 37.037 0.00 0.00 44.86 3.42
1523 1666 7.989170 ACAATGACAGATTCATCAACATAGCTA 59.011 33.333 0.00 0.00 44.86 3.32
1524 1667 6.827251 ACAATGACAGATTCATCAACATAGCT 59.173 34.615 0.00 0.00 44.86 3.32
1525 1668 7.024340 ACAATGACAGATTCATCAACATAGC 57.976 36.000 0.00 0.00 44.86 2.97
1526 1669 8.671028 TGAACAATGACAGATTCATCAACATAG 58.329 33.333 0.00 0.00 44.86 2.23
1527 1670 8.564509 TGAACAATGACAGATTCATCAACATA 57.435 30.769 0.00 0.00 44.86 2.29
1528 1671 7.457024 TGAACAATGACAGATTCATCAACAT 57.543 32.000 0.00 0.00 44.86 2.71
1529 1672 6.880942 TGAACAATGACAGATTCATCAACA 57.119 33.333 0.00 0.00 44.86 3.33
1532 1675 9.623000 AGAATATGAACAATGACAGATTCATCA 57.377 29.630 22.10 0.00 44.86 3.07
1562 1705 9.772973 TTCTCAAGTACACAACAATGTATTACT 57.227 29.630 0.00 0.00 38.37 2.24
1565 1708 9.283768 TCATTCTCAAGTACACAACAATGTATT 57.716 29.630 0.00 0.00 37.82 1.89
1566 1709 8.846943 TCATTCTCAAGTACACAACAATGTAT 57.153 30.769 0.00 0.00 37.82 2.29
1567 1710 8.846943 ATCATTCTCAAGTACACAACAATGTA 57.153 30.769 0.00 0.00 37.82 2.29
1568 1711 7.750229 ATCATTCTCAAGTACACAACAATGT 57.250 32.000 0.00 0.00 41.61 2.71
1569 1712 7.752239 GGAATCATTCTCAAGTACACAACAATG 59.248 37.037 0.00 0.00 0.00 2.82
1570 1713 7.361201 CGGAATCATTCTCAAGTACACAACAAT 60.361 37.037 0.00 0.00 0.00 2.71
1571 1714 6.073276 CGGAATCATTCTCAAGTACACAACAA 60.073 38.462 0.00 0.00 0.00 2.83
1572 1715 5.408299 CGGAATCATTCTCAAGTACACAACA 59.592 40.000 0.00 0.00 0.00 3.33
1573 1716 5.637810 TCGGAATCATTCTCAAGTACACAAC 59.362 40.000 0.00 0.00 0.00 3.32
1574 1717 5.789521 TCGGAATCATTCTCAAGTACACAA 58.210 37.500 0.00 0.00 0.00 3.33
1575 1718 5.400066 TCGGAATCATTCTCAAGTACACA 57.600 39.130 0.00 0.00 0.00 3.72
1576 1719 5.277058 GCATCGGAATCATTCTCAAGTACAC 60.277 44.000 0.00 0.00 0.00 2.90
1577 1720 4.811024 GCATCGGAATCATTCTCAAGTACA 59.189 41.667 0.00 0.00 0.00 2.90
1578 1721 4.212214 GGCATCGGAATCATTCTCAAGTAC 59.788 45.833 0.00 0.00 0.00 2.73
1579 1722 4.101585 AGGCATCGGAATCATTCTCAAGTA 59.898 41.667 0.00 0.00 0.00 2.24
1580 1723 3.118112 AGGCATCGGAATCATTCTCAAGT 60.118 43.478 0.00 0.00 0.00 3.16
1808 1964 2.409064 TTCACCTCTCTAACACCCCA 57.591 50.000 0.00 0.00 0.00 4.96
2096 2256 4.039124 CAGAATAACCCCAAACAAAGCACT 59.961 41.667 0.00 0.00 0.00 4.40
2276 2442 9.683069 AAGAATAGCTTAAACATTGACAAACAG 57.317 29.630 0.00 0.00 34.31 3.16
2278 2444 9.463443 ACAAGAATAGCTTAAACATTGACAAAC 57.537 29.630 0.00 0.00 34.31 2.93
2297 2463 9.974980 ACGGAAAACATAACAAATTACAAGAAT 57.025 25.926 0.00 0.00 0.00 2.40
2298 2464 9.804758 AACGGAAAACATAACAAATTACAAGAA 57.195 25.926 0.00 0.00 0.00 2.52
2299 2465 9.453325 GAACGGAAAACATAACAAATTACAAGA 57.547 29.630 0.00 0.00 0.00 3.02
2300 2466 9.239002 TGAACGGAAAACATAACAAATTACAAG 57.761 29.630 0.00 0.00 0.00 3.16
2301 2467 9.751542 ATGAACGGAAAACATAACAAATTACAA 57.248 25.926 0.00 0.00 0.00 2.41
2302 2468 9.186323 CATGAACGGAAAACATAACAAATTACA 57.814 29.630 0.00 0.00 0.00 2.41
2303 2469 8.643752 CCATGAACGGAAAACATAACAAATTAC 58.356 33.333 0.00 0.00 0.00 1.89
2304 2470 8.361139 ACCATGAACGGAAAACATAACAAATTA 58.639 29.630 0.00 0.00 0.00 1.40
2305 2471 7.213678 ACCATGAACGGAAAACATAACAAATT 58.786 30.769 0.00 0.00 0.00 1.82
2306 2472 6.754193 ACCATGAACGGAAAACATAACAAAT 58.246 32.000 0.00 0.00 0.00 2.32
2307 2473 6.150396 ACCATGAACGGAAAACATAACAAA 57.850 33.333 0.00 0.00 0.00 2.83
2308 2474 5.776173 ACCATGAACGGAAAACATAACAA 57.224 34.783 0.00 0.00 0.00 2.83
2309 2475 5.998981 AGTACCATGAACGGAAAACATAACA 59.001 36.000 0.00 0.00 0.00 2.41
2310 2476 6.072893 ACAGTACCATGAACGGAAAACATAAC 60.073 38.462 0.00 0.00 0.00 1.89
2311 2477 5.998981 ACAGTACCATGAACGGAAAACATAA 59.001 36.000 0.00 0.00 0.00 1.90
2312 2478 5.553123 ACAGTACCATGAACGGAAAACATA 58.447 37.500 0.00 0.00 0.00 2.29
2313 2479 4.394729 ACAGTACCATGAACGGAAAACAT 58.605 39.130 0.00 0.00 0.00 2.71
2314 2480 3.811083 ACAGTACCATGAACGGAAAACA 58.189 40.909 0.00 0.00 0.00 2.83
2315 2481 4.823790 AACAGTACCATGAACGGAAAAC 57.176 40.909 0.00 0.00 0.00 2.43
2316 2482 5.467399 CAGTAACAGTACCATGAACGGAAAA 59.533 40.000 0.00 0.00 0.00 2.29
2317 2483 4.992319 CAGTAACAGTACCATGAACGGAAA 59.008 41.667 0.00 0.00 0.00 3.13
2318 2484 4.039488 ACAGTAACAGTACCATGAACGGAA 59.961 41.667 0.00 0.00 0.00 4.30
2319 2485 3.575256 ACAGTAACAGTACCATGAACGGA 59.425 43.478 0.00 0.00 0.00 4.69
2320 2486 3.921677 ACAGTAACAGTACCATGAACGG 58.078 45.455 0.00 0.00 0.00 4.44
2321 2487 6.384224 TCTAACAGTAACAGTACCATGAACG 58.616 40.000 0.00 0.00 0.00 3.95
2322 2488 8.033038 TCATCTAACAGTAACAGTACCATGAAC 58.967 37.037 0.00 0.00 0.00 3.18
2323 2489 8.129496 TCATCTAACAGTAACAGTACCATGAA 57.871 34.615 0.00 0.00 0.00 2.57
2324 2490 7.712204 TCATCTAACAGTAACAGTACCATGA 57.288 36.000 0.00 0.00 0.00 3.07
2325 2491 7.981789 ACATCATCTAACAGTAACAGTACCATG 59.018 37.037 0.00 0.00 0.00 3.66
2326 2492 7.981789 CACATCATCTAACAGTAACAGTACCAT 59.018 37.037 0.00 0.00 0.00 3.55
2327 2493 7.177744 TCACATCATCTAACAGTAACAGTACCA 59.822 37.037 0.00 0.00 0.00 3.25
2328 2494 7.544622 TCACATCATCTAACAGTAACAGTACC 58.455 38.462 0.00 0.00 0.00 3.34
2329 2495 9.025020 CATCACATCATCTAACAGTAACAGTAC 57.975 37.037 0.00 0.00 0.00 2.73
2330 2496 8.749354 ACATCACATCATCTAACAGTAACAGTA 58.251 33.333 0.00 0.00 0.00 2.74
2331 2497 7.615403 ACATCACATCATCTAACAGTAACAGT 58.385 34.615 0.00 0.00 0.00 3.55
2332 2498 9.025020 GTACATCACATCATCTAACAGTAACAG 57.975 37.037 0.00 0.00 0.00 3.16
2333 2499 8.749354 AGTACATCACATCATCTAACAGTAACA 58.251 33.333 0.00 0.00 0.00 2.41
2334 2500 9.239002 GAGTACATCACATCATCTAACAGTAAC 57.761 37.037 0.00 0.00 0.00 2.50
2335 2501 8.966868 TGAGTACATCACATCATCTAACAGTAA 58.033 33.333 0.00 0.00 31.12 2.24
2336 2502 8.519799 TGAGTACATCACATCATCTAACAGTA 57.480 34.615 0.00 0.00 31.12 2.74
2337 2503 7.410120 TGAGTACATCACATCATCTAACAGT 57.590 36.000 0.00 0.00 31.12 3.55
2338 2504 7.384387 CCATGAGTACATCACATCATCTAACAG 59.616 40.741 0.00 0.00 41.91 3.16
2339 2505 7.069826 TCCATGAGTACATCACATCATCTAACA 59.930 37.037 0.00 0.00 41.91 2.41
2340 2506 7.436933 TCCATGAGTACATCACATCATCTAAC 58.563 38.462 0.00 0.00 41.91 2.34
2341 2507 7.601705 TCCATGAGTACATCACATCATCTAA 57.398 36.000 0.00 0.00 41.91 2.10
2342 2508 7.601705 TTCCATGAGTACATCACATCATCTA 57.398 36.000 0.00 0.00 41.91 1.98
2343 2509 6.490241 TTCCATGAGTACATCACATCATCT 57.510 37.500 0.00 0.00 41.91 2.90
2344 2510 7.359849 CGAATTCCATGAGTACATCACATCATC 60.360 40.741 0.00 0.00 41.91 2.92
2345 2511 6.426025 CGAATTCCATGAGTACATCACATCAT 59.574 38.462 0.00 0.00 41.91 2.45
2546 2720 0.474854 TCCCAAGCTGTCCTGGGTAA 60.475 55.000 18.75 0.27 42.09 2.85
2628 2862 6.017934 TGAGGTCAAGATTGAAAGTTCGAAAG 60.018 38.462 0.00 0.00 39.21 2.62
2965 3203 6.039047 AGCATCACCTGATACAATTTGATCAC 59.961 38.462 2.79 0.00 32.63 3.06
3100 3338 7.949434 TCTGTACTGTAGAGACGATGATACTA 58.051 38.462 10.32 0.00 0.00 1.82
3557 3948 5.160641 CCATTTTCATAACACAACCCTTCG 58.839 41.667 0.00 0.00 0.00 3.79
3816 4285 7.616150 AGTGGCATAATCCGTAGATATTCTAGT 59.384 37.037 0.00 0.00 28.01 2.57
3830 4300 7.921786 TGCATATTACTAAGTGGCATAATCC 57.078 36.000 0.00 0.00 0.00 3.01
3884 4354 6.566197 ACAAAAACTATTCTTGAGCCTGAG 57.434 37.500 0.00 0.00 0.00 3.35
4379 4871 2.552585 GATGCTGCCACGCTTTGCAT 62.553 55.000 0.00 10.36 40.62 3.96
4494 4986 2.355132 CAGCAGATGACTCCAGCAAATC 59.645 50.000 0.00 0.00 0.00 2.17
4554 5046 6.154203 TGAAAGTCTCTGCTCGATATGATT 57.846 37.500 0.00 0.00 0.00 2.57
4664 5156 5.748670 TTGTATGTAGTAGAAGCCCACAA 57.251 39.130 0.00 0.00 0.00 3.33
4763 5260 8.633561 GCAAGTAGCTCCTGGAAAATAATAATT 58.366 33.333 0.00 0.00 41.15 1.40
4924 5427 6.706270 ACCACACAACTTGACATAGTTTAGAG 59.294 38.462 0.00 0.00 36.24 2.43
6564 7380 2.565841 GCAGATAGTTACAAGGGCCTG 58.434 52.381 6.92 3.83 0.00 4.85
6582 7398 5.128499 TCAATTCAAAAAGAAACTGGAGGCA 59.872 36.000 0.00 0.00 40.22 4.75
6659 7482 7.795482 TTATCGAGGAACAAAAACTGAGAAA 57.205 32.000 0.00 0.00 0.00 2.52
6684 7507 9.247861 GCTATCTCAATGGAATGGGTAATTAAT 57.752 33.333 0.00 0.00 0.00 1.40
6685 7508 8.224025 TGCTATCTCAATGGAATGGGTAATTAA 58.776 33.333 0.00 0.00 0.00 1.40
6738 7561 2.877168 GCATGGCATCTACAAGGAAGAG 59.123 50.000 0.00 0.00 0.00 2.85
6881 7707 4.201523 GCAACGTGAATATTTTGCTTGCTC 60.202 41.667 13.07 0.00 40.97 4.26
6946 7774 8.758829 TCCTCTATCTGCAGAACAATTAGTTAA 58.241 33.333 22.50 4.70 41.51 2.01
7341 8169 4.878397 AGAATAAGTCCAGCACATAACAGC 59.122 41.667 0.00 0.00 0.00 4.40
7347 8175 3.276857 CTGCAGAATAAGTCCAGCACAT 58.723 45.455 8.42 0.00 34.91 3.21
7708 8545 3.962063 TCATTAGTATGTAACAGCGGGGA 59.038 43.478 0.00 0.00 33.34 4.81
7712 8549 7.520119 TGAAGTTCATTAGTATGTAACAGCG 57.480 36.000 0.08 0.00 33.34 5.18
7739 8576 4.985538 TCAAGGTAGTCCTGCTTTGAAAT 58.014 39.130 7.33 0.00 44.35 2.17
7907 8744 1.615883 TGAGTGAGTGAGCAGAAGTCC 59.384 52.381 0.00 0.00 0.00 3.85
7995 8832 1.992170 CATTTGGAGAAAGCAGCTGC 58.008 50.000 31.53 31.53 42.49 5.25
8056 8893 7.809806 GGAGTTACAGGAAAAATCATCACAAAG 59.190 37.037 0.00 0.00 0.00 2.77
8060 8897 6.817765 TGGAGTTACAGGAAAAATCATCAC 57.182 37.500 0.00 0.00 0.00 3.06
8071 8908 3.913799 TCCCTGAAAATGGAGTTACAGGA 59.086 43.478 0.00 0.00 42.24 3.86
8072 8909 4.301072 TCCCTGAAAATGGAGTTACAGG 57.699 45.455 0.00 0.00 40.78 4.00
8079 8916 7.944729 TTCTTTTAGATCCCTGAAAATGGAG 57.055 36.000 0.00 0.00 33.27 3.86
8091 8928 6.462067 CCTTGCCCATGAATTCTTTTAGATCC 60.462 42.308 7.05 0.00 0.00 3.36
8100 8937 2.906268 GGCCTTGCCCATGAATTCT 58.094 52.632 7.05 0.00 44.06 2.40
8158 8998 6.500589 CCTAGGAGGTTAATTTCTGATCCA 57.499 41.667 1.05 0.00 0.00 3.41
8175 9015 4.593206 TCTTCTGCTCAAGAAAACCTAGGA 59.407 41.667 17.98 0.00 44.38 2.94
8188 9028 6.638096 TTTCATCAACAAATCTTCTGCTCA 57.362 33.333 0.00 0.00 0.00 4.26
8233 9073 1.433837 AATCCGGTTAATGCGCGACC 61.434 55.000 12.10 7.15 0.00 4.79
8241 9081 3.230743 GCAACTTGCAATCCGGTTAAT 57.769 42.857 8.97 0.00 44.26 1.40
8262 9102 5.047872 ACCAGGTCGCCGTTTTATTTATTTT 60.048 36.000 0.00 0.00 0.00 1.82
8334 9177 1.014564 CCGCCTTCTTCCGACAAGTC 61.015 60.000 0.00 0.00 0.00 3.01
8341 9184 0.108329 TAAGCTTCCGCCTTCTTCCG 60.108 55.000 0.00 0.00 36.60 4.30
8355 9198 3.383185 GTCAGGCTCTGTCTATGTAAGCT 59.617 47.826 2.68 0.00 33.50 3.74
8402 9247 5.123227 GCTTGCAGGAAACATATACAGGTA 58.877 41.667 0.00 0.00 0.00 3.08
8403 9248 3.947834 GCTTGCAGGAAACATATACAGGT 59.052 43.478 0.00 0.00 0.00 4.00
8747 9596 2.164422 GTCCTGCATTTTAGCCTTCCAC 59.836 50.000 0.00 0.00 0.00 4.02
8804 9653 2.510613 CCTCACGGGTTACACCAAAAT 58.489 47.619 0.00 0.00 41.02 1.82
8831 9680 0.448990 CCCAGCAACATCATGTGTCG 59.551 55.000 0.00 0.00 41.14 4.35
8863 9712 1.497722 GCCAGTTTCACGCAGTAGC 59.502 57.895 0.00 0.00 41.61 3.58
8870 9719 3.241552 CGTATTAAGTCGCCAGTTTCACG 60.242 47.826 0.00 0.00 0.00 4.35
8945 9794 5.263599 TGCCTCATCTTGTTTGTCCATAAT 58.736 37.500 0.00 0.00 0.00 1.28
8950 9799 3.084039 TGATGCCTCATCTTGTTTGTCC 58.916 45.455 8.11 0.00 41.06 4.02
8965 9814 1.418373 GCCTTGAAACGTTTGATGCC 58.582 50.000 20.10 3.85 0.00 4.40
9001 9850 0.806868 ATCATTTGTGAGGTGCTGCG 59.193 50.000 0.00 0.00 0.00 5.18
9008 9857 6.018751 CCGAGTACATGTAATCATTTGTGAGG 60.019 42.308 27.38 16.30 31.18 3.86
9010 9859 5.293324 GCCGAGTACATGTAATCATTTGTGA 59.707 40.000 27.38 0.00 31.18 3.58
9019 9868 1.340248 CGAGGGCCGAGTACATGTAAT 59.660 52.381 7.25 6.28 41.76 1.89
9045 9894 2.671682 GGACTGAACCTGGCCCTC 59.328 66.667 0.00 0.00 0.00 4.30
9046 9895 2.936032 GGGACTGAACCTGGCCCT 60.936 66.667 0.00 0.00 45.77 5.19
9053 9903 2.047560 CGTTCCCGGGACTGAACC 60.048 66.667 26.87 6.03 38.05 3.62
9064 9914 2.754658 TCGAGCTCCTCCGTTCCC 60.755 66.667 8.47 0.00 0.00 3.97
9083 9933 7.139392 TCTCTTCATAATTTCTACCGTCATCG 58.861 38.462 0.00 0.00 0.00 3.84
9084 9934 9.482627 AATCTCTTCATAATTTCTACCGTCATC 57.517 33.333 0.00 0.00 0.00 2.92
9085 9935 9.265901 CAATCTCTTCATAATTTCTACCGTCAT 57.734 33.333 0.00 0.00 0.00 3.06
9086 9936 7.224753 GCAATCTCTTCATAATTTCTACCGTCA 59.775 37.037 0.00 0.00 0.00 4.35
9087 9937 7.439655 AGCAATCTCTTCATAATTTCTACCGTC 59.560 37.037 0.00 0.00 0.00 4.79
9088 9938 7.275920 AGCAATCTCTTCATAATTTCTACCGT 58.724 34.615 0.00 0.00 0.00 4.83
9089 9939 7.721286 AGCAATCTCTTCATAATTTCTACCG 57.279 36.000 0.00 0.00 0.00 4.02
9090 9940 9.113838 TGAAGCAATCTCTTCATAATTTCTACC 57.886 33.333 2.43 0.00 45.21 3.18
9102 9952 5.062809 CGGTTACTCTTGAAGCAATCTCTTC 59.937 44.000 0.00 0.00 42.04 2.87
9103 9953 4.932200 CGGTTACTCTTGAAGCAATCTCTT 59.068 41.667 0.00 0.00 0.00 2.85
9104 9954 4.499183 CGGTTACTCTTGAAGCAATCTCT 58.501 43.478 0.00 0.00 0.00 3.10
9105 9955 3.619038 CCGGTTACTCTTGAAGCAATCTC 59.381 47.826 0.00 0.00 0.00 2.75
9106 9956 3.008049 ACCGGTTACTCTTGAAGCAATCT 59.992 43.478 0.00 0.00 0.00 2.40
9107 9957 3.335579 ACCGGTTACTCTTGAAGCAATC 58.664 45.455 0.00 0.00 0.00 2.67
9108 9958 3.335579 GACCGGTTACTCTTGAAGCAAT 58.664 45.455 9.42 0.00 0.00 3.56
9109 9959 2.762745 GACCGGTTACTCTTGAAGCAA 58.237 47.619 9.42 0.00 0.00 3.91
9110 9960 1.336517 CGACCGGTTACTCTTGAAGCA 60.337 52.381 9.42 0.00 0.00 3.91
9111 9961 1.336609 ACGACCGGTTACTCTTGAAGC 60.337 52.381 9.42 0.00 0.00 3.86
9112 9962 2.719426 ACGACCGGTTACTCTTGAAG 57.281 50.000 9.42 0.00 0.00 3.02
9113 9963 3.125316 CAAACGACCGGTTACTCTTGAA 58.875 45.455 9.42 0.00 38.08 2.69
9114 9964 2.746269 CAAACGACCGGTTACTCTTGA 58.254 47.619 9.42 0.00 38.08 3.02
9115 9965 1.193874 GCAAACGACCGGTTACTCTTG 59.806 52.381 9.42 9.80 38.08 3.02
9116 9966 1.069668 AGCAAACGACCGGTTACTCTT 59.930 47.619 9.42 0.00 38.08 2.85
9117 9967 0.677842 AGCAAACGACCGGTTACTCT 59.322 50.000 9.42 0.00 38.08 3.24
9118 9968 1.066136 GAGCAAACGACCGGTTACTC 58.934 55.000 9.42 6.14 38.08 2.59
9119 9969 0.320160 GGAGCAAACGACCGGTTACT 60.320 55.000 9.42 0.00 38.08 2.24
9120 9970 0.320160 AGGAGCAAACGACCGGTTAC 60.320 55.000 9.42 0.00 38.08 2.50
9121 9971 0.037975 GAGGAGCAAACGACCGGTTA 60.038 55.000 9.42 0.00 38.08 2.85
9122 9972 1.301479 GAGGAGCAAACGACCGGTT 60.301 57.895 9.42 0.00 41.76 4.44
9123 9973 2.207924 AGAGGAGCAAACGACCGGT 61.208 57.895 6.92 6.92 0.00 5.28
9124 9974 1.738099 CAGAGGAGCAAACGACCGG 60.738 63.158 0.00 0.00 0.00 5.28
9125 9975 2.383527 GCAGAGGAGCAAACGACCG 61.384 63.158 0.00 0.00 0.00 4.79
9126 9976 1.004440 AGCAGAGGAGCAAACGACC 60.004 57.895 0.00 0.00 36.85 4.79
9127 9977 1.347817 CGAGCAGAGGAGCAAACGAC 61.348 60.000 0.00 0.00 36.85 4.34
9128 9978 1.080501 CGAGCAGAGGAGCAAACGA 60.081 57.895 0.00 0.00 36.85 3.85
9129 9979 2.097038 CCGAGCAGAGGAGCAAACG 61.097 63.158 0.00 0.00 36.85 3.60
9130 9980 1.743252 CCCGAGCAGAGGAGCAAAC 60.743 63.158 0.00 0.00 36.85 2.93
9131 9981 2.665000 CCCGAGCAGAGGAGCAAA 59.335 61.111 0.00 0.00 36.85 3.68
9132 9982 3.393970 CCCCGAGCAGAGGAGCAA 61.394 66.667 0.00 0.00 36.85 3.91
9133 9983 4.382541 TCCCCGAGCAGAGGAGCA 62.383 66.667 0.00 0.00 36.85 4.26
9134 9984 3.535962 CTCCCCGAGCAGAGGAGC 61.536 72.222 0.00 0.00 40.75 4.70
9138 9988 2.837291 CCTCCTCCCCGAGCAGAG 60.837 72.222 0.00 0.00 0.00 3.35
9139 9989 3.347590 TCCTCCTCCCCGAGCAGA 61.348 66.667 0.00 0.00 0.00 4.26
9140 9990 2.837291 CTCCTCCTCCCCGAGCAG 60.837 72.222 0.00 0.00 0.00 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.