Multiple sequence alignment - TraesCS2D01G036300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G036300 chr2D 100.000 3599 0 0 1 3599 13682564 13678966 0.000000e+00 6647.0
1 TraesCS2D01G036300 chr2D 90.541 74 6 1 455 527 101687157 101687230 2.960000e-16 97.1
2 TraesCS2D01G036300 chr2D 86.022 93 10 3 435 527 434339729 434339640 2.960000e-16 97.1
3 TraesCS2D01G036300 chr2A 87.672 2255 156 50 523 2700 15874318 15876527 0.000000e+00 2512.0
4 TraesCS2D01G036300 chr2A 91.364 440 35 2 2945 3382 15882314 15882752 1.850000e-167 599.0
5 TraesCS2D01G036300 chr2A 88.679 318 24 7 1 309 15874128 15874442 9.430000e-101 377.0
6 TraesCS2D01G036300 chr2A 84.530 181 17 9 3427 3599 15883175 15883352 6.180000e-38 169.0
7 TraesCS2D01G036300 chr2A 88.182 110 12 1 3257 3366 674125288 674125180 2.920000e-26 130.0
8 TraesCS2D01G036300 chr2A 92.754 69 3 2 459 527 678590214 678590148 8.220000e-17 99.0
9 TraesCS2D01G036300 chr2B 91.381 789 53 6 1909 2696 24921864 24921090 0.000000e+00 1066.0
10 TraesCS2D01G036300 chr2B 89.675 862 52 15 1051 1894 24923034 24922192 0.000000e+00 1064.0
11 TraesCS2D01G036300 chr2B 90.591 457 40 2 2912 3366 24913888 24913433 1.430000e-168 603.0
12 TraesCS2D01G036300 chr2B 87.273 220 26 1 3382 3599 24913009 24912790 2.150000e-62 250.0
13 TraesCS2D01G036300 chr2B 87.288 118 8 2 526 636 24949144 24949027 1.050000e-25 128.0
14 TraesCS2D01G036300 chr2B 87.500 72 6 2 403 474 24923818 24923750 2.980000e-11 80.5
15 TraesCS2D01G036300 chr6A 88.618 738 42 14 1455 2177 31917791 31918501 0.000000e+00 859.0
16 TraesCS2D01G036300 chr6B 90.868 219 18 2 3382 3599 607678575 607678358 3.510000e-75 292.0
17 TraesCS2D01G036300 chr5D 100.000 58 0 0 470 527 296949522 296949465 1.370000e-19 108.0
18 TraesCS2D01G036300 chr5D 96.875 64 1 1 464 527 203315232 203315170 4.910000e-19 106.0
19 TraesCS2D01G036300 chr7B 95.522 67 2 1 462 527 689198705 689198771 4.910000e-19 106.0
20 TraesCS2D01G036300 chr7B 100.000 28 0 0 2798 2825 12403254 12403281 6.000000e-03 52.8
21 TraesCS2D01G036300 chr4D 96.774 62 2 0 466 527 58643750 58643811 1.770000e-18 104.0
22 TraesCS2D01G036300 chr3B 98.305 59 1 0 471 529 79117114 79117056 1.770000e-18 104.0
23 TraesCS2D01G036300 chr1B 88.889 81 5 4 448 524 623822091 623822171 2.960000e-16 97.1
24 TraesCS2D01G036300 chr4A 100.000 38 0 0 2787 2824 662286423 662286460 1.790000e-08 71.3
25 TraesCS2D01G036300 chr5B 97.297 37 0 1 2787 2822 251558741 251558777 1.080000e-05 62.1
26 TraesCS2D01G036300 chr4B 97.222 36 1 0 1358 1393 22807894 22807859 1.080000e-05 62.1
27 TraesCS2D01G036300 chr7D 94.286 35 2 0 2791 2825 69823782 69823816 2.000000e-03 54.7
28 TraesCS2D01G036300 chr7D 94.286 35 2 0 2791 2825 69865421 69865455 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G036300 chr2D 13678966 13682564 3598 True 6647.000000 6647 100.000000 1 3599 1 chr2D.!!$R1 3598
1 TraesCS2D01G036300 chr2A 15874128 15876527 2399 False 1444.500000 2512 88.175500 1 2700 2 chr2A.!!$F1 2699
2 TraesCS2D01G036300 chr2A 15882314 15883352 1038 False 384.000000 599 87.947000 2945 3599 2 chr2A.!!$F2 654
3 TraesCS2D01G036300 chr2B 24921090 24923818 2728 True 736.833333 1066 89.518667 403 2696 3 chr2B.!!$R3 2293
4 TraesCS2D01G036300 chr2B 24912790 24913888 1098 True 426.500000 603 88.932000 2912 3599 2 chr2B.!!$R2 687
5 TraesCS2D01G036300 chr6A 31917791 31918501 710 False 859.000000 859 88.618000 1455 2177 1 chr6A.!!$F1 722

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
610 618 0.108615 TTTTGTGTTTGTGGTGGCGG 60.109 50.0 0.0 0.0 0.00 6.13 F
890 1202 0.234884 CTCGTTTTGCGTTCACCCTC 59.765 55.0 0.0 0.0 42.13 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2485 3212 0.607217 TGCCGAAGACGACTCCAGTA 60.607 55.0 0.00 0.0 42.66 2.74 R
2836 3563 0.179150 TTCAAGTTGTTGTGTGCCGC 60.179 50.0 2.11 0.0 34.98 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.347490 CCACCAAGTGCGGCTAGT 59.653 61.111 0.00 0.00 31.34 2.57
43 44 1.203052 TGTTTGGAGTCGATCGGTACC 59.797 52.381 16.41 15.43 0.00 3.34
44 45 0.819582 TTTGGAGTCGATCGGTACCC 59.180 55.000 16.41 11.85 0.00 3.69
60 61 3.136992 GGTACCCGGAATAAATTGAGGGA 59.863 47.826 0.73 1.85 41.26 4.20
65 66 4.460263 CCGGAATAAATTGAGGGATCACA 58.540 43.478 0.00 0.00 0.00 3.58
66 67 5.072741 CCGGAATAAATTGAGGGATCACAT 58.927 41.667 0.00 0.00 0.00 3.21
102 103 6.094719 GCACATCACATGTTTGTATCATTGT 58.905 36.000 10.13 0.00 42.70 2.71
117 118 6.986231 TGTATCATTGTATGCTACTCAGGTTG 59.014 38.462 0.00 0.00 34.05 3.77
122 123 3.576550 TGTATGCTACTCAGGTTGTGTGA 59.423 43.478 0.00 0.00 0.00 3.58
130 133 4.269183 ACTCAGGTTGTGTGATTGACAAA 58.731 39.130 0.00 0.00 35.91 2.83
195 202 9.716507 TTTCGCTAATACAAAGATAAATGCTTC 57.283 29.630 0.00 0.00 0.00 3.86
205 213 7.828223 ACAAAGATAAATGCTTCTGAGAGTCAT 59.172 33.333 0.00 0.00 0.00 3.06
224 232 6.189859 AGTCATGCTCTGAATTATTTTGGGA 58.810 36.000 0.00 0.00 35.07 4.37
235 243 8.398878 TGAATTATTTTGGGAGAACTTAACGT 57.601 30.769 0.00 0.00 0.00 3.99
238 246 2.922740 TTGGGAGAACTTAACGTGCT 57.077 45.000 0.00 0.00 32.72 4.40
252 260 8.118976 ACTTAACGTGCTATATATCTTGCCTA 57.881 34.615 0.00 0.00 0.00 3.93
253 261 8.582437 ACTTAACGTGCTATATATCTTGCCTAA 58.418 33.333 0.00 0.00 0.00 2.69
254 262 8.981724 TTAACGTGCTATATATCTTGCCTAAG 57.018 34.615 0.00 0.00 35.16 2.18
255 263 6.591750 ACGTGCTATATATCTTGCCTAAGT 57.408 37.500 0.00 0.00 35.38 2.24
256 264 6.994221 ACGTGCTATATATCTTGCCTAAGTT 58.006 36.000 0.00 0.00 35.38 2.66
257 265 7.442656 ACGTGCTATATATCTTGCCTAAGTTT 58.557 34.615 0.00 0.00 35.38 2.66
258 266 7.931948 ACGTGCTATATATCTTGCCTAAGTTTT 59.068 33.333 0.00 0.00 35.38 2.43
259 267 8.223769 CGTGCTATATATCTTGCCTAAGTTTTG 58.776 37.037 0.00 0.00 35.38 2.44
260 268 9.057089 GTGCTATATATCTTGCCTAAGTTTTGT 57.943 33.333 0.00 0.00 35.38 2.83
261 269 9.056005 TGCTATATATCTTGCCTAAGTTTTGTG 57.944 33.333 0.00 0.00 35.38 3.33
262 270 9.057089 GCTATATATCTTGCCTAAGTTTTGTGT 57.943 33.333 0.00 0.00 35.38 3.72
266 274 5.652994 TCTTGCCTAAGTTTTGTGTTTGT 57.347 34.783 0.00 0.00 35.38 2.83
267 275 5.406649 TCTTGCCTAAGTTTTGTGTTTGTG 58.593 37.500 0.00 0.00 35.38 3.33
268 276 4.116747 TGCCTAAGTTTTGTGTTTGTGG 57.883 40.909 0.00 0.00 0.00 4.17
269 277 3.511934 TGCCTAAGTTTTGTGTTTGTGGT 59.488 39.130 0.00 0.00 0.00 4.16
270 278 3.862845 GCCTAAGTTTTGTGTTTGTGGTG 59.137 43.478 0.00 0.00 0.00 4.17
271 279 4.429108 CCTAAGTTTTGTGTTTGTGGTGG 58.571 43.478 0.00 0.00 0.00 4.61
272 280 4.081917 CCTAAGTTTTGTGTTTGTGGTGGT 60.082 41.667 0.00 0.00 0.00 4.16
273 281 3.311486 AGTTTTGTGTTTGTGGTGGTG 57.689 42.857 0.00 0.00 0.00 4.17
274 282 2.028567 AGTTTTGTGTTTGTGGTGGTGG 60.029 45.455 0.00 0.00 0.00 4.61
275 283 0.898320 TTTGTGTTTGTGGTGGTGGG 59.102 50.000 0.00 0.00 0.00 4.61
276 284 0.972983 TTGTGTTTGTGGTGGTGGGG 60.973 55.000 0.00 0.00 0.00 4.96
277 285 1.380650 GTGTTTGTGGTGGTGGGGT 60.381 57.895 0.00 0.00 0.00 4.95
278 286 1.380515 TGTTTGTGGTGGTGGGGTG 60.381 57.895 0.00 0.00 0.00 4.61
279 287 2.131067 GTTTGTGGTGGTGGGGTGG 61.131 63.158 0.00 0.00 0.00 4.61
280 288 3.381509 TTTGTGGTGGTGGGGTGGG 62.382 63.158 0.00 0.00 0.00 4.61
288 296 4.218686 GTGGGGTGGGGCTGTGTT 62.219 66.667 0.00 0.00 0.00 3.32
289 297 3.434179 TGGGGTGGGGCTGTGTTT 61.434 61.111 0.00 0.00 0.00 2.83
290 298 2.123033 GGGGTGGGGCTGTGTTTT 60.123 61.111 0.00 0.00 0.00 2.43
291 299 2.207229 GGGGTGGGGCTGTGTTTTC 61.207 63.158 0.00 0.00 0.00 2.29
292 300 1.456705 GGGTGGGGCTGTGTTTTCA 60.457 57.895 0.00 0.00 0.00 2.69
293 301 0.831711 GGGTGGGGCTGTGTTTTCAT 60.832 55.000 0.00 0.00 0.00 2.57
294 302 1.549037 GGGTGGGGCTGTGTTTTCATA 60.549 52.381 0.00 0.00 0.00 2.15
295 303 2.243810 GGTGGGGCTGTGTTTTCATAA 58.756 47.619 0.00 0.00 0.00 1.90
296 304 2.231235 GGTGGGGCTGTGTTTTCATAAG 59.769 50.000 0.00 0.00 0.00 1.73
297 305 3.153919 GTGGGGCTGTGTTTTCATAAGA 58.846 45.455 0.00 0.00 0.00 2.10
298 306 3.191371 GTGGGGCTGTGTTTTCATAAGAG 59.809 47.826 0.00 0.00 0.00 2.85
299 307 2.164422 GGGGCTGTGTTTTCATAAGAGC 59.836 50.000 0.00 0.00 0.00 4.09
300 308 2.819608 GGGCTGTGTTTTCATAAGAGCA 59.180 45.455 0.00 0.00 0.00 4.26
301 309 3.255642 GGGCTGTGTTTTCATAAGAGCAA 59.744 43.478 0.00 0.00 0.00 3.91
302 310 4.261994 GGGCTGTGTTTTCATAAGAGCAAA 60.262 41.667 0.00 0.00 0.00 3.68
303 311 5.288804 GGCTGTGTTTTCATAAGAGCAAAA 58.711 37.500 0.00 0.00 0.00 2.44
304 312 5.752955 GGCTGTGTTTTCATAAGAGCAAAAA 59.247 36.000 0.00 0.00 0.00 1.94
375 383 9.971922 ATGTTAGAAAGTTGAAAATCTTGGAAG 57.028 29.630 0.00 0.00 0.00 3.46
376 384 8.966868 TGTTAGAAAGTTGAAAATCTTGGAAGT 58.033 29.630 0.00 0.00 0.00 3.01
377 385 9.803315 GTTAGAAAGTTGAAAATCTTGGAAGTT 57.197 29.630 0.00 0.00 0.00 2.66
379 387 8.066612 AGAAAGTTGAAAATCTTGGAAGTTCA 57.933 30.769 5.01 0.00 0.00 3.18
380 388 8.531146 AGAAAGTTGAAAATCTTGGAAGTTCAA 58.469 29.630 5.01 0.00 36.21 2.69
381 389 9.150348 GAAAGTTGAAAATCTTGGAAGTTCAAA 57.850 29.630 5.01 0.00 39.26 2.69
382 390 8.479313 AAGTTGAAAATCTTGGAAGTTCAAAC 57.521 30.769 5.01 0.00 39.26 2.93
383 391 7.840931 AGTTGAAAATCTTGGAAGTTCAAACT 58.159 30.769 5.01 0.00 39.26 2.66
398 406 5.720202 GTTCAAACTTGGAACTTTGAAGGT 58.280 37.500 5.94 0.00 43.60 3.50
399 407 5.993748 TCAAACTTGGAACTTTGAAGGTT 57.006 34.783 0.00 0.00 34.24 3.50
400 408 5.719173 TCAAACTTGGAACTTTGAAGGTTG 58.281 37.500 0.00 0.00 43.05 3.77
401 409 4.736126 AACTTGGAACTTTGAAGGTTGG 57.264 40.909 0.00 0.00 0.00 3.77
406 414 5.118729 TGGAACTTTGAAGGTTGGAAGTA 57.881 39.130 0.00 0.00 32.44 2.24
416 424 4.584327 AGGTTGGAAGTATTGTGTTTGC 57.416 40.909 0.00 0.00 0.00 3.68
479 487 6.526056 AAAACCCTAAAAGTTCTACTCCCT 57.474 37.500 0.00 0.00 0.00 4.20
480 488 5.758790 AACCCTAAAAGTTCTACTCCCTC 57.241 43.478 0.00 0.00 0.00 4.30
481 489 4.102598 ACCCTAAAAGTTCTACTCCCTCC 58.897 47.826 0.00 0.00 0.00 4.30
482 490 3.132467 CCCTAAAAGTTCTACTCCCTCCG 59.868 52.174 0.00 0.00 0.00 4.63
483 491 3.768215 CCTAAAAGTTCTACTCCCTCCGT 59.232 47.826 0.00 0.00 0.00 4.69
484 492 4.222366 CCTAAAAGTTCTACTCCCTCCGTT 59.778 45.833 0.00 0.00 0.00 4.44
485 493 3.957591 AAAGTTCTACTCCCTCCGTTC 57.042 47.619 0.00 0.00 0.00 3.95
486 494 1.849977 AGTTCTACTCCCTCCGTTCC 58.150 55.000 0.00 0.00 0.00 3.62
487 495 1.358445 AGTTCTACTCCCTCCGTTCCT 59.642 52.381 0.00 0.00 0.00 3.36
488 496 2.579860 AGTTCTACTCCCTCCGTTCCTA 59.420 50.000 0.00 0.00 0.00 2.94
489 497 3.011032 AGTTCTACTCCCTCCGTTCCTAA 59.989 47.826 0.00 0.00 0.00 2.69
490 498 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
491 499 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
492 500 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
493 501 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
494 502 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
495 503 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
496 504 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
497 505 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
498 506 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
499 507 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
500 508 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
501 509 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
502 510 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
503 511 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
520 528 8.367660 AGTCTTTGTAGAGATTTCACTATGGA 57.632 34.615 0.00 0.00 0.00 3.41
521 529 8.254508 AGTCTTTGTAGAGATTTCACTATGGAC 58.745 37.037 0.00 0.00 0.00 4.02
522 530 8.254508 GTCTTTGTAGAGATTTCACTATGGACT 58.745 37.037 0.00 0.00 0.00 3.85
523 531 9.475620 TCTTTGTAGAGATTTCACTATGGACTA 57.524 33.333 0.00 0.00 0.00 2.59
524 532 9.522804 CTTTGTAGAGATTTCACTATGGACTAC 57.477 37.037 0.00 0.00 0.00 2.73
525 533 8.589701 TTGTAGAGATTTCACTATGGACTACA 57.410 34.615 0.00 0.00 36.83 2.74
526 534 8.768501 TGTAGAGATTTCACTATGGACTACAT 57.231 34.615 0.00 0.00 43.68 2.29
527 535 8.633561 TGTAGAGATTTCACTATGGACTACATG 58.366 37.037 0.00 0.00 40.82 3.21
528 536 6.520272 AGAGATTTCACTATGGACTACATGC 58.480 40.000 0.00 0.00 40.82 4.06
529 537 6.326064 AGAGATTTCACTATGGACTACATGCT 59.674 38.462 0.00 0.00 40.82 3.79
530 538 6.893583 AGATTTCACTATGGACTACATGCTT 58.106 36.000 0.00 0.00 40.82 3.91
531 539 6.989169 AGATTTCACTATGGACTACATGCTTC 59.011 38.462 0.00 0.00 40.82 3.86
532 540 5.939764 TTCACTATGGACTACATGCTTCT 57.060 39.130 0.00 0.00 40.82 2.85
533 541 5.268118 TCACTATGGACTACATGCTTCTG 57.732 43.478 0.00 0.00 40.82 3.02
534 542 4.956075 TCACTATGGACTACATGCTTCTGA 59.044 41.667 0.00 0.00 40.82 3.27
535 543 5.068329 TCACTATGGACTACATGCTTCTGAG 59.932 44.000 0.00 0.00 40.82 3.35
536 544 5.068329 CACTATGGACTACATGCTTCTGAGA 59.932 44.000 0.00 0.00 40.82 3.27
537 545 4.669206 ATGGACTACATGCTTCTGAGAG 57.331 45.455 0.00 0.00 38.70 3.20
538 546 3.435275 TGGACTACATGCTTCTGAGAGT 58.565 45.455 0.00 0.00 0.00 3.24
539 547 3.834813 TGGACTACATGCTTCTGAGAGTT 59.165 43.478 0.00 0.00 0.00 3.01
540 548 4.081972 TGGACTACATGCTTCTGAGAGTTC 60.082 45.833 0.00 0.00 0.00 3.01
541 549 4.081972 GGACTACATGCTTCTGAGAGTTCA 60.082 45.833 0.00 0.00 0.00 3.18
542 550 5.473931 GACTACATGCTTCTGAGAGTTCAA 58.526 41.667 0.00 0.00 31.69 2.69
543 551 5.477510 ACTACATGCTTCTGAGAGTTCAAG 58.522 41.667 0.00 0.00 31.69 3.02
544 552 3.072944 ACATGCTTCTGAGAGTTCAAGC 58.927 45.455 0.00 0.00 37.58 4.01
545 553 3.244491 ACATGCTTCTGAGAGTTCAAGCT 60.244 43.478 4.89 0.00 37.82 3.74
546 554 3.037431 TGCTTCTGAGAGTTCAAGCTC 57.963 47.619 4.89 0.00 37.82 4.09
559 567 7.824672 AGAGTTCAAGCTCTCAATTATTTTGG 58.175 34.615 3.27 0.00 41.62 3.28
560 568 6.928520 AGTTCAAGCTCTCAATTATTTTGGG 58.071 36.000 0.00 0.00 0.00 4.12
561 569 6.721208 AGTTCAAGCTCTCAATTATTTTGGGA 59.279 34.615 0.00 0.00 0.00 4.37
562 570 6.764308 TCAAGCTCTCAATTATTTTGGGAG 57.236 37.500 10.22 10.22 46.93 4.30
571 579 9.231297 TCTCAATTATTTTGGGAGAACTTACTG 57.769 33.333 0.00 0.00 32.10 2.74
572 580 7.826690 TCAATTATTTTGGGAGAACTTACTGC 58.173 34.615 0.00 0.00 0.00 4.40
573 581 6.775594 ATTATTTTGGGAGAACTTACTGCC 57.224 37.500 0.00 0.00 46.28 4.85
574 582 3.876309 TTTTGGGAGAACTTACTGCCT 57.124 42.857 0.00 0.00 46.26 4.75
575 583 4.986054 TTTTGGGAGAACTTACTGCCTA 57.014 40.909 0.00 0.00 46.26 3.93
576 584 5.514500 TTTTGGGAGAACTTACTGCCTAT 57.486 39.130 0.00 0.00 46.26 2.57
577 585 6.630203 TTTTGGGAGAACTTACTGCCTATA 57.370 37.500 0.00 0.00 46.26 1.31
578 586 6.824958 TTTGGGAGAACTTACTGCCTATAT 57.175 37.500 0.00 0.00 46.26 0.86
579 587 7.924358 TTTGGGAGAACTTACTGCCTATATA 57.076 36.000 0.00 0.00 46.26 0.86
580 588 8.506196 TTTGGGAGAACTTACTGCCTATATAT 57.494 34.615 0.00 0.00 46.26 0.86
581 589 7.719871 TGGGAGAACTTACTGCCTATATATC 57.280 40.000 0.00 0.00 46.26 1.63
582 590 7.479579 TGGGAGAACTTACTGCCTATATATCT 58.520 38.462 0.00 0.00 46.26 1.98
583 591 7.956315 TGGGAGAACTTACTGCCTATATATCTT 59.044 37.037 0.00 0.00 46.26 2.40
584 592 8.254508 GGGAGAACTTACTGCCTATATATCTTG 58.745 40.741 0.00 0.00 43.48 3.02
585 593 7.762159 GGAGAACTTACTGCCTATATATCTTGC 59.238 40.741 0.00 0.00 0.00 4.01
586 594 7.616313 AGAACTTACTGCCTATATATCTTGCC 58.384 38.462 0.00 0.00 0.00 4.52
587 595 7.456269 AGAACTTACTGCCTATATATCTTGCCT 59.544 37.037 0.00 0.00 0.00 4.75
588 596 8.666129 AACTTACTGCCTATATATCTTGCCTA 57.334 34.615 0.00 0.00 0.00 3.93
589 597 8.666129 ACTTACTGCCTATATATCTTGCCTAA 57.334 34.615 0.00 0.00 0.00 2.69
590 598 9.101325 ACTTACTGCCTATATATCTTGCCTAAA 57.899 33.333 0.00 0.00 0.00 1.85
594 602 9.813826 ACTGCCTATATATCTTGCCTAAATTTT 57.186 29.630 0.00 0.00 0.00 1.82
596 604 9.586732 TGCCTATATATCTTGCCTAAATTTTGT 57.413 29.630 0.00 0.00 0.00 2.83
597 605 9.846248 GCCTATATATCTTGCCTAAATTTTGTG 57.154 33.333 0.00 0.00 0.00 3.33
603 611 6.900568 TCTTGCCTAAATTTTGTGTTTGTG 57.099 33.333 0.00 0.00 0.00 3.33
604 612 5.814705 TCTTGCCTAAATTTTGTGTTTGTGG 59.185 36.000 0.00 0.00 0.00 4.17
605 613 5.091261 TGCCTAAATTTTGTGTTTGTGGT 57.909 34.783 0.00 0.00 0.00 4.16
606 614 4.872691 TGCCTAAATTTTGTGTTTGTGGTG 59.127 37.500 0.00 0.00 0.00 4.17
607 615 4.272261 GCCTAAATTTTGTGTTTGTGGTGG 59.728 41.667 0.00 0.00 0.00 4.61
608 616 4.272261 CCTAAATTTTGTGTTTGTGGTGGC 59.728 41.667 0.00 0.00 0.00 5.01
609 617 1.933247 ATTTTGTGTTTGTGGTGGCG 58.067 45.000 0.00 0.00 0.00 5.69
610 618 0.108615 TTTTGTGTTTGTGGTGGCGG 60.109 50.000 0.00 0.00 0.00 6.13
611 619 1.949847 TTTGTGTTTGTGGTGGCGGG 61.950 55.000 0.00 0.00 0.00 6.13
612 620 3.601685 GTGTTTGTGGTGGCGGGG 61.602 66.667 0.00 0.00 0.00 5.73
613 621 4.130554 TGTTTGTGGTGGCGGGGT 62.131 61.111 0.00 0.00 0.00 4.95
614 622 3.601685 GTTTGTGGTGGCGGGGTG 61.602 66.667 0.00 0.00 0.00 4.61
615 623 3.810188 TTTGTGGTGGCGGGGTGA 61.810 61.111 0.00 0.00 0.00 4.02
616 624 3.783362 TTTGTGGTGGCGGGGTGAG 62.783 63.158 0.00 0.00 0.00 3.51
624 632 4.626081 GCGGGGTGAGCTGTGTGT 62.626 66.667 0.00 0.00 0.00 3.72
625 633 2.111043 CGGGGTGAGCTGTGTGTT 59.889 61.111 0.00 0.00 0.00 3.32
626 634 1.961277 CGGGGTGAGCTGTGTGTTC 60.961 63.158 0.00 0.00 0.00 3.18
627 635 1.148273 GGGGTGAGCTGTGTGTTCA 59.852 57.895 0.00 0.00 33.48 3.18
628 636 0.465460 GGGGTGAGCTGTGTGTTCAA 60.465 55.000 0.00 0.00 37.64 2.69
629 637 1.388547 GGGTGAGCTGTGTGTTCAAA 58.611 50.000 0.00 0.00 37.64 2.69
630 638 1.748493 GGGTGAGCTGTGTGTTCAAAA 59.252 47.619 0.00 0.00 37.64 2.44
631 639 2.223572 GGGTGAGCTGTGTGTTCAAAAG 60.224 50.000 0.00 0.00 37.64 2.27
632 640 2.682856 GGTGAGCTGTGTGTTCAAAAGA 59.317 45.455 0.00 0.00 37.64 2.52
633 641 3.487544 GGTGAGCTGTGTGTTCAAAAGAC 60.488 47.826 0.00 0.00 37.64 3.01
634 642 2.682856 TGAGCTGTGTGTTCAAAAGACC 59.317 45.455 0.00 0.00 32.96 3.85
635 643 2.682856 GAGCTGTGTGTTCAAAAGACCA 59.317 45.455 0.00 0.00 0.00 4.02
636 644 2.423538 AGCTGTGTGTTCAAAAGACCAC 59.576 45.455 0.00 0.00 0.00 4.16
637 645 2.479560 GCTGTGTGTTCAAAAGACCACC 60.480 50.000 0.00 0.00 0.00 4.61
638 646 2.096248 TGTGTGTTCAAAAGACCACCC 58.904 47.619 0.00 0.00 0.00 4.61
639 647 2.096248 GTGTGTTCAAAAGACCACCCA 58.904 47.619 0.00 0.00 0.00 4.51
640 648 2.494073 GTGTGTTCAAAAGACCACCCAA 59.506 45.455 0.00 0.00 0.00 4.12
641 649 3.056465 GTGTGTTCAAAAGACCACCCAAA 60.056 43.478 0.00 0.00 0.00 3.28
642 650 3.578716 TGTGTTCAAAAGACCACCCAAAA 59.421 39.130 0.00 0.00 0.00 2.44
643 651 4.040461 TGTGTTCAAAAGACCACCCAAAAA 59.960 37.500 0.00 0.00 0.00 1.94
691 700 5.989551 AAAAATGTGGAGTGTTCAAATGC 57.010 34.783 0.00 0.00 0.00 3.56
693 702 6.403866 AAAATGTGGAGTGTTCAAATGCTA 57.596 33.333 0.00 0.00 0.00 3.49
722 1010 6.096423 AGTCTAAAACCTTGGAAGTTCAAACC 59.904 38.462 5.01 0.00 0.00 3.27
734 1022 2.952310 AGTTCAAACCTGGAGCTTTGAC 59.048 45.455 9.68 6.60 36.38 3.18
739 1027 0.250338 ACCTGGAGCTTTGACGGTTC 60.250 55.000 0.00 0.00 0.00 3.62
782 1071 4.909696 TTGCGTGAATTTCCTTCTGAAA 57.090 36.364 0.00 0.00 46.54 2.69
804 1093 6.563398 AATTTCGTCGAAAGTTTGAAAACC 57.437 33.333 23.43 0.00 39.71 3.27
850 1147 3.791887 CGATGTCAATGTCGTCCTTCTAC 59.208 47.826 0.00 0.00 33.42 2.59
865 1177 1.342555 TCTACGACGTTCGCCAAATG 58.657 50.000 5.50 0.00 45.12 2.32
871 1183 1.327764 GACGTTCGCCAAATGGAGATC 59.672 52.381 6.72 5.57 43.47 2.75
878 1190 2.420022 CGCCAAATGGAGATCTCGTTTT 59.580 45.455 16.46 14.49 37.14 2.43
880 1192 3.762779 CCAAATGGAGATCTCGTTTTGC 58.237 45.455 27.44 12.88 37.39 3.68
888 1200 0.872388 ATCTCGTTTTGCGTTCACCC 59.128 50.000 0.00 0.00 42.13 4.61
890 1202 0.234884 CTCGTTTTGCGTTCACCCTC 59.765 55.000 0.00 0.00 42.13 4.30
937 1263 1.983224 CCCATCGGGCCGAATAGAT 59.017 57.895 34.58 13.76 39.99 1.98
964 1292 0.672342 GGTGTACTCGAGTGGTGTGT 59.328 55.000 28.12 2.06 0.00 3.72
965 1293 1.602165 GGTGTACTCGAGTGGTGTGTG 60.602 57.143 28.12 0.00 0.00 3.82
1006 1335 1.872234 CACTCCATCGTACGGTGCG 60.872 63.158 23.08 17.13 0.00 5.34
1224 1597 4.834453 CTCGGCTCAGCTGGCTGG 62.834 72.222 26.04 17.97 43.75 4.85
1429 1810 4.510340 GCGAGGTACGGTAATTCATTCATT 59.490 41.667 0.00 0.00 42.83 2.57
1430 1811 5.558273 GCGAGGTACGGTAATTCATTCATTG 60.558 44.000 0.00 0.00 42.83 2.82
1431 1812 5.050363 CGAGGTACGGTAATTCATTCATTGG 60.050 44.000 0.00 0.00 38.46 3.16
1432 1813 4.578928 AGGTACGGTAATTCATTCATTGGC 59.421 41.667 0.00 0.00 0.00 4.52
1436 1817 3.181488 CGGTAATTCATTCATTGGCTGCA 60.181 43.478 0.50 0.00 0.00 4.41
1866 2265 1.689582 GGTCATCGGGGAGGGAGTT 60.690 63.158 0.00 0.00 0.00 3.01
1896 2611 7.805071 CAGTGAACAAAATCTTAACTCCATGAC 59.195 37.037 0.00 0.00 0.00 3.06
1905 2620 2.936919 AACTCCATGACACTTGCTGA 57.063 45.000 0.00 0.00 0.00 4.26
1906 2621 2.936919 ACTCCATGACACTTGCTGAA 57.063 45.000 0.00 0.00 0.00 3.02
1907 2622 3.430042 ACTCCATGACACTTGCTGAAT 57.570 42.857 0.00 0.00 0.00 2.57
1988 2713 0.247736 CAGAGGCCTACGACAAGCTT 59.752 55.000 4.42 0.00 0.00 3.74
2093 2819 2.041701 ACAAGGGCTCAAAAATGCTGT 58.958 42.857 0.00 0.00 0.00 4.40
2106 2832 5.649782 AAAATGCTGTTCACTTATCTGGG 57.350 39.130 0.00 0.00 0.00 4.45
2107 2833 4.574674 AATGCTGTTCACTTATCTGGGA 57.425 40.909 0.00 0.00 0.00 4.37
2108 2834 3.616956 TGCTGTTCACTTATCTGGGAG 57.383 47.619 0.00 0.00 0.00 4.30
2109 2835 2.237143 TGCTGTTCACTTATCTGGGAGG 59.763 50.000 0.00 0.00 0.00 4.30
2270 2996 2.352422 GTGATGTGCTGCCCCTGA 59.648 61.111 0.00 0.00 0.00 3.86
2335 3062 4.201763 GGATCTTGATCGTGTGCTTCTTTC 60.202 45.833 4.75 0.00 0.00 2.62
2415 3142 1.890979 CATGGAGGATGTGCGCTCC 60.891 63.158 9.73 7.64 35.63 4.70
2436 3163 6.090088 GCTCCTCTATGCTGAAATACATAACG 59.910 42.308 0.00 0.00 0.00 3.18
2466 3193 1.299926 GCCTACATACGGCGGTGAG 60.300 63.158 19.03 12.05 37.87 3.51
2508 3235 1.078759 GGAGTCGTCTTCGGCACATG 61.079 60.000 0.00 0.00 44.74 3.21
2515 3242 0.950836 TCTTCGGCACATGGTTGTTG 59.049 50.000 0.00 0.00 32.34 3.33
2591 3318 8.617761 TTTTGTTTCGGTTGTATTTAGTTGTC 57.382 30.769 0.00 0.00 0.00 3.18
2609 3336 9.952030 TTAGTTGTCCTGTTTCATATATGTTGA 57.048 29.630 12.42 0.00 0.00 3.18
2639 3366 6.149474 GTGAGTAGCTTTATTGGCAAAGAGAA 59.851 38.462 3.01 0.00 37.66 2.87
2646 3373 8.367156 AGCTTTATTGGCAAAGAGAAATTGTAA 58.633 29.630 3.01 0.00 37.66 2.41
2696 3423 9.464714 GTACCACAGATATATACAACAAGACTG 57.535 37.037 0.00 0.00 0.00 3.51
2697 3424 8.306313 ACCACAGATATATACAACAAGACTGA 57.694 34.615 0.00 0.00 0.00 3.41
2698 3425 8.928448 ACCACAGATATATACAACAAGACTGAT 58.072 33.333 0.00 0.00 0.00 2.90
2699 3426 9.416794 CCACAGATATATACAACAAGACTGATC 57.583 37.037 0.00 0.00 0.00 2.92
2700 3427 9.416794 CACAGATATATACAACAAGACTGATCC 57.583 37.037 0.00 0.00 0.00 3.36
2701 3428 8.300286 ACAGATATATACAACAAGACTGATCCG 58.700 37.037 0.00 0.00 0.00 4.18
2702 3429 7.274468 CAGATATATACAACAAGACTGATCCGC 59.726 40.741 0.00 0.00 0.00 5.54
2703 3430 3.895232 ATACAACAAGACTGATCCGCT 57.105 42.857 0.00 0.00 0.00 5.52
2704 3431 2.550830 ACAACAAGACTGATCCGCTT 57.449 45.000 0.00 0.00 0.00 4.68
2705 3432 2.851195 ACAACAAGACTGATCCGCTTT 58.149 42.857 0.00 0.00 0.00 3.51
2706 3433 2.808543 ACAACAAGACTGATCCGCTTTC 59.191 45.455 0.00 0.00 0.00 2.62
2707 3434 2.100605 ACAAGACTGATCCGCTTTCC 57.899 50.000 0.00 0.00 0.00 3.13
2708 3435 1.339151 ACAAGACTGATCCGCTTTCCC 60.339 52.381 0.00 0.00 0.00 3.97
2709 3436 0.108138 AAGACTGATCCGCTTTCCCG 60.108 55.000 0.00 0.00 0.00 5.14
2717 3444 2.862738 CCGCTTTCCCGGTTTATGT 58.137 52.632 0.00 0.00 43.24 2.29
2718 3445 0.730840 CCGCTTTCCCGGTTTATGTC 59.269 55.000 0.00 0.00 43.24 3.06
2719 3446 1.677820 CCGCTTTCCCGGTTTATGTCT 60.678 52.381 0.00 0.00 43.24 3.41
2720 3447 1.664151 CGCTTTCCCGGTTTATGTCTC 59.336 52.381 0.00 0.00 0.00 3.36
2721 3448 1.664151 GCTTTCCCGGTTTATGTCTCG 59.336 52.381 0.00 0.00 0.00 4.04
2722 3449 2.933928 GCTTTCCCGGTTTATGTCTCGT 60.934 50.000 0.00 0.00 0.00 4.18
2723 3450 3.676873 GCTTTCCCGGTTTATGTCTCGTA 60.677 47.826 0.00 0.00 0.00 3.43
2724 3451 3.508744 TTCCCGGTTTATGTCTCGTAC 57.491 47.619 0.00 0.00 0.00 3.67
2725 3452 2.445427 TCCCGGTTTATGTCTCGTACA 58.555 47.619 0.00 0.00 43.86 2.90
2735 3462 3.953712 TGTCTCGTACATTGACATGGT 57.046 42.857 0.00 0.00 36.03 3.55
2736 3463 4.265904 TGTCTCGTACATTGACATGGTT 57.734 40.909 0.00 0.00 36.03 3.67
2737 3464 4.637276 TGTCTCGTACATTGACATGGTTT 58.363 39.130 0.00 0.00 36.03 3.27
2738 3465 4.450757 TGTCTCGTACATTGACATGGTTTG 59.549 41.667 0.00 0.00 36.03 2.93
2739 3466 3.435327 TCTCGTACATTGACATGGTTTGC 59.565 43.478 0.00 0.00 34.27 3.68
2740 3467 3.407698 TCGTACATTGACATGGTTTGCT 58.592 40.909 0.00 0.00 34.27 3.91
2741 3468 3.188254 TCGTACATTGACATGGTTTGCTG 59.812 43.478 0.00 0.00 34.27 4.41
2742 3469 3.188254 CGTACATTGACATGGTTTGCTGA 59.812 43.478 0.00 0.00 34.27 4.26
2743 3470 4.320129 CGTACATTGACATGGTTTGCTGAA 60.320 41.667 0.00 0.00 34.27 3.02
2744 3471 4.877378 ACATTGACATGGTTTGCTGAAT 57.123 36.364 0.00 0.00 34.27 2.57
2745 3472 4.813027 ACATTGACATGGTTTGCTGAATC 58.187 39.130 0.00 0.00 34.27 2.52
2746 3473 4.525487 ACATTGACATGGTTTGCTGAATCT 59.475 37.500 0.00 0.00 34.27 2.40
2747 3474 4.508461 TTGACATGGTTTGCTGAATCTG 57.492 40.909 0.00 0.00 0.00 2.90
2748 3475 2.229543 TGACATGGTTTGCTGAATCTGC 59.770 45.455 5.11 5.11 0.00 4.26
2749 3476 2.490903 GACATGGTTTGCTGAATCTGCT 59.509 45.455 13.10 0.00 0.00 4.24
2750 3477 2.230508 ACATGGTTTGCTGAATCTGCTG 59.769 45.455 13.10 4.76 0.00 4.41
2751 3478 1.250328 TGGTTTGCTGAATCTGCTGG 58.750 50.000 13.10 0.00 0.00 4.85
2752 3479 1.251251 GGTTTGCTGAATCTGCTGGT 58.749 50.000 13.10 0.00 0.00 4.00
2753 3480 1.068055 GGTTTGCTGAATCTGCTGGTG 60.068 52.381 13.10 0.00 0.00 4.17
2754 3481 1.610522 GTTTGCTGAATCTGCTGGTGT 59.389 47.619 13.10 0.00 0.00 4.16
2755 3482 1.985473 TTGCTGAATCTGCTGGTGTT 58.015 45.000 13.10 0.00 0.00 3.32
2756 3483 1.985473 TGCTGAATCTGCTGGTGTTT 58.015 45.000 13.10 0.00 0.00 2.83
2757 3484 2.309613 TGCTGAATCTGCTGGTGTTTT 58.690 42.857 13.10 0.00 0.00 2.43
2758 3485 3.485394 TGCTGAATCTGCTGGTGTTTTA 58.515 40.909 13.10 0.00 0.00 1.52
2759 3486 4.081406 TGCTGAATCTGCTGGTGTTTTAT 58.919 39.130 13.10 0.00 0.00 1.40
2760 3487 4.523943 TGCTGAATCTGCTGGTGTTTTATT 59.476 37.500 13.10 0.00 0.00 1.40
2761 3488 5.709631 TGCTGAATCTGCTGGTGTTTTATTA 59.290 36.000 13.10 0.00 0.00 0.98
2762 3489 6.030228 GCTGAATCTGCTGGTGTTTTATTAC 58.970 40.000 4.82 0.00 0.00 1.89
2763 3490 6.349280 GCTGAATCTGCTGGTGTTTTATTACA 60.349 38.462 4.82 0.00 0.00 2.41
2764 3491 7.144722 TGAATCTGCTGGTGTTTTATTACAG 57.855 36.000 0.00 0.00 0.00 2.74
2765 3492 6.714810 TGAATCTGCTGGTGTTTTATTACAGT 59.285 34.615 0.00 0.00 0.00 3.55
2766 3493 5.940192 TCTGCTGGTGTTTTATTACAGTG 57.060 39.130 0.00 0.00 0.00 3.66
2767 3494 5.616270 TCTGCTGGTGTTTTATTACAGTGA 58.384 37.500 0.00 0.00 0.00 3.41
2768 3495 6.058833 TCTGCTGGTGTTTTATTACAGTGAA 58.941 36.000 0.00 0.00 0.00 3.18
2769 3496 6.017440 TCTGCTGGTGTTTTATTACAGTGAAC 60.017 38.462 0.00 0.00 0.00 3.18
2770 3497 5.590663 TGCTGGTGTTTTATTACAGTGAACA 59.409 36.000 0.00 0.00 0.00 3.18
2771 3498 6.264292 TGCTGGTGTTTTATTACAGTGAACAT 59.736 34.615 0.00 0.00 33.39 2.71
2772 3499 6.582295 GCTGGTGTTTTATTACAGTGAACATG 59.418 38.462 0.00 0.00 33.39 3.21
2773 3500 7.575414 TGGTGTTTTATTACAGTGAACATGT 57.425 32.000 0.00 0.00 33.39 3.21
2774 3501 8.678593 TGGTGTTTTATTACAGTGAACATGTA 57.321 30.769 0.00 0.00 33.39 2.29
2775 3502 8.561212 TGGTGTTTTATTACAGTGAACATGTAC 58.439 33.333 0.00 0.00 33.01 2.90
2776 3503 8.561212 GGTGTTTTATTACAGTGAACATGTACA 58.439 33.333 0.00 0.00 33.01 2.90
2789 3516 2.626743 ACATGTACATAGGTACCGCCTC 59.373 50.000 14.65 0.00 46.96 4.70
2790 3517 2.742428 TGTACATAGGTACCGCCTCT 57.258 50.000 14.65 0.00 46.96 3.69
2791 3518 2.304092 TGTACATAGGTACCGCCTCTG 58.696 52.381 14.65 3.67 46.96 3.35
2792 3519 3.609798 ACATAGGTACCGCCTCTGT 57.390 52.632 6.18 4.30 46.96 3.41
2795 3522 3.366440 CATAGGTACCGCCTCTGTAAC 57.634 52.381 6.18 0.00 46.96 2.50
2796 3523 1.767759 TAGGTACCGCCTCTGTAACC 58.232 55.000 6.18 0.00 46.96 2.85
2797 3524 0.251922 AGGTACCGCCTCTGTAACCA 60.252 55.000 6.18 0.00 46.96 3.67
2798 3525 0.609662 GGTACCGCCTCTGTAACCAA 59.390 55.000 0.00 0.00 0.00 3.67
2799 3526 1.002315 GGTACCGCCTCTGTAACCAAA 59.998 52.381 0.00 0.00 0.00 3.28
2800 3527 2.355412 GGTACCGCCTCTGTAACCAAAT 60.355 50.000 0.00 0.00 0.00 2.32
2801 3528 3.118665 GGTACCGCCTCTGTAACCAAATA 60.119 47.826 0.00 0.00 0.00 1.40
2802 3529 3.926058 ACCGCCTCTGTAACCAAATAT 57.074 42.857 0.00 0.00 0.00 1.28
2803 3530 5.221501 GGTACCGCCTCTGTAACCAAATATA 60.222 44.000 0.00 0.00 0.00 0.86
2804 3531 5.362105 ACCGCCTCTGTAACCAAATATAA 57.638 39.130 0.00 0.00 0.00 0.98
2805 3532 5.365619 ACCGCCTCTGTAACCAAATATAAG 58.634 41.667 0.00 0.00 0.00 1.73
2806 3533 5.129815 ACCGCCTCTGTAACCAAATATAAGA 59.870 40.000 0.00 0.00 0.00 2.10
2807 3534 5.465724 CCGCCTCTGTAACCAAATATAAGAC 59.534 44.000 0.00 0.00 0.00 3.01
2808 3535 5.175126 CGCCTCTGTAACCAAATATAAGACG 59.825 44.000 0.00 0.00 0.00 4.18
2809 3536 6.047231 GCCTCTGTAACCAAATATAAGACGT 58.953 40.000 0.00 0.00 0.00 4.34
2810 3537 6.537660 GCCTCTGTAACCAAATATAAGACGTT 59.462 38.462 0.00 0.00 0.00 3.99
2811 3538 7.065443 GCCTCTGTAACCAAATATAAGACGTTT 59.935 37.037 0.00 0.00 0.00 3.60
2812 3539 8.943002 CCTCTGTAACCAAATATAAGACGTTTT 58.057 33.333 0.00 0.00 0.00 2.43
2815 3542 8.730970 TGTAACCAAATATAAGACGTTTTTGC 57.269 30.769 0.00 0.00 0.00 3.68
2816 3543 8.350722 TGTAACCAAATATAAGACGTTTTTGCA 58.649 29.630 0.00 0.00 0.00 4.08
2817 3544 7.867445 AACCAAATATAAGACGTTTTTGCAG 57.133 32.000 0.00 0.00 0.00 4.41
2818 3545 6.977213 ACCAAATATAAGACGTTTTTGCAGT 58.023 32.000 0.00 0.00 0.00 4.40
2819 3546 7.430441 ACCAAATATAAGACGTTTTTGCAGTT 58.570 30.769 0.00 0.00 0.00 3.16
2820 3547 7.593644 ACCAAATATAAGACGTTTTTGCAGTTC 59.406 33.333 0.00 0.00 0.00 3.01
2821 3548 7.593273 CCAAATATAAGACGTTTTTGCAGTTCA 59.407 33.333 0.00 0.00 0.00 3.18
2822 3549 8.963130 CAAATATAAGACGTTTTTGCAGTTCAA 58.037 29.630 0.00 0.00 0.00 2.69
2823 3550 9.522804 AAATATAAGACGTTTTTGCAGTTCAAA 57.477 25.926 0.00 0.00 42.50 2.69
2824 3551 8.728088 ATATAAGACGTTTTTGCAGTTCAAAG 57.272 30.769 0.00 0.00 44.62 2.77
2825 3552 4.434713 AGACGTTTTTGCAGTTCAAAGT 57.565 36.364 0.00 0.00 44.62 2.66
2826 3553 5.554822 AGACGTTTTTGCAGTTCAAAGTA 57.445 34.783 0.00 0.00 44.62 2.24
2827 3554 6.131544 AGACGTTTTTGCAGTTCAAAGTAT 57.868 33.333 0.00 0.00 44.62 2.12
2828 3555 7.254227 AGACGTTTTTGCAGTTCAAAGTATA 57.746 32.000 0.00 0.00 44.62 1.47
2829 3556 7.871853 AGACGTTTTTGCAGTTCAAAGTATAT 58.128 30.769 0.00 0.00 44.62 0.86
2830 3557 8.995220 AGACGTTTTTGCAGTTCAAAGTATATA 58.005 29.630 0.00 0.00 44.62 0.86
2831 3558 9.601971 GACGTTTTTGCAGTTCAAAGTATATAA 57.398 29.630 0.00 0.00 44.62 0.98
2838 3565 8.028540 TGCAGTTCAAAGTATATAATATGGCG 57.971 34.615 0.00 0.00 0.00 5.69
2839 3566 7.119116 TGCAGTTCAAAGTATATAATATGGCGG 59.881 37.037 0.00 0.00 0.00 6.13
2840 3567 7.464358 CAGTTCAAAGTATATAATATGGCGGC 58.536 38.462 0.00 0.00 0.00 6.53
2841 3568 7.119116 CAGTTCAAAGTATATAATATGGCGGCA 59.881 37.037 16.34 16.34 0.00 5.69
2842 3569 6.978343 TCAAAGTATATAATATGGCGGCAC 57.022 37.500 16.34 0.00 0.00 5.01
2843 3570 6.468543 TCAAAGTATATAATATGGCGGCACA 58.531 36.000 16.34 1.34 0.00 4.57
2844 3571 6.370442 TCAAAGTATATAATATGGCGGCACAC 59.630 38.462 16.34 2.39 0.00 3.82
2845 3572 5.414789 AGTATATAATATGGCGGCACACA 57.585 39.130 16.34 2.42 0.00 3.72
2846 3573 5.800296 AGTATATAATATGGCGGCACACAA 58.200 37.500 16.34 0.25 0.00 3.33
2847 3574 5.642063 AGTATATAATATGGCGGCACACAAC 59.358 40.000 16.34 4.96 0.00 3.32
2848 3575 2.115343 TAATATGGCGGCACACAACA 57.885 45.000 16.34 0.00 0.00 3.33
2849 3576 1.252175 AATATGGCGGCACACAACAA 58.748 45.000 16.34 0.00 0.00 2.83
2850 3577 0.525761 ATATGGCGGCACACAACAAC 59.474 50.000 16.34 0.00 0.00 3.32
2851 3578 0.536233 TATGGCGGCACACAACAACT 60.536 50.000 16.34 0.00 0.00 3.16
2852 3579 1.391157 ATGGCGGCACACAACAACTT 61.391 50.000 16.34 0.00 0.00 2.66
2853 3580 1.588667 GGCGGCACACAACAACTTG 60.589 57.895 3.07 0.00 0.00 3.16
2854 3581 1.431440 GCGGCACACAACAACTTGA 59.569 52.632 0.00 0.00 0.00 3.02
2855 3582 0.179150 GCGGCACACAACAACTTGAA 60.179 50.000 0.00 0.00 0.00 2.69
2856 3583 1.826327 CGGCACACAACAACTTGAAG 58.174 50.000 0.00 0.00 0.00 3.02
2857 3584 1.400142 CGGCACACAACAACTTGAAGA 59.600 47.619 0.00 0.00 0.00 2.87
2858 3585 2.033299 CGGCACACAACAACTTGAAGAT 59.967 45.455 0.00 0.00 0.00 2.40
2859 3586 3.489059 CGGCACACAACAACTTGAAGATT 60.489 43.478 0.00 0.00 0.00 2.40
2860 3587 4.432712 GGCACACAACAACTTGAAGATTT 58.567 39.130 0.00 0.00 0.00 2.17
2861 3588 4.268405 GGCACACAACAACTTGAAGATTTG 59.732 41.667 0.00 1.66 0.00 2.32
2862 3589 4.864247 GCACACAACAACTTGAAGATTTGT 59.136 37.500 0.00 2.29 33.08 2.83
2863 3590 6.033341 GCACACAACAACTTGAAGATTTGTA 58.967 36.000 0.00 0.00 31.64 2.41
2864 3591 6.020678 GCACACAACAACTTGAAGATTTGTAC 60.021 38.462 0.00 0.00 31.64 2.90
2865 3592 6.194508 CACACAACAACTTGAAGATTTGTACG 59.805 38.462 0.00 0.00 31.64 3.67
2866 3593 5.681105 CACAACAACTTGAAGATTTGTACGG 59.319 40.000 0.00 0.00 31.64 4.02
2867 3594 4.483476 ACAACTTGAAGATTTGTACGGC 57.517 40.909 0.00 0.00 30.27 5.68
2868 3595 3.252458 ACAACTTGAAGATTTGTACGGCC 59.748 43.478 0.00 0.00 30.27 6.13
2869 3596 3.134574 ACTTGAAGATTTGTACGGCCA 57.865 42.857 2.24 0.00 0.00 5.36
2870 3597 3.482436 ACTTGAAGATTTGTACGGCCAA 58.518 40.909 2.24 0.00 0.00 4.52
2871 3598 3.252458 ACTTGAAGATTTGTACGGCCAAC 59.748 43.478 2.24 0.00 0.00 3.77
2872 3599 2.156098 TGAAGATTTGTACGGCCAACC 58.844 47.619 2.24 0.00 0.00 3.77
2873 3600 2.156098 GAAGATTTGTACGGCCAACCA 58.844 47.619 2.24 0.00 34.57 3.67
2874 3601 1.821216 AGATTTGTACGGCCAACCAG 58.179 50.000 2.24 0.00 34.57 4.00
2875 3602 1.073284 AGATTTGTACGGCCAACCAGT 59.927 47.619 2.24 0.00 34.57 4.00
2876 3603 2.303600 AGATTTGTACGGCCAACCAGTA 59.696 45.455 2.24 0.00 34.57 2.74
2877 3604 2.863132 TTTGTACGGCCAACCAGTAT 57.137 45.000 2.24 0.00 34.57 2.12
2878 3605 3.977134 TTTGTACGGCCAACCAGTATA 57.023 42.857 2.24 0.00 34.57 1.47
2879 3606 2.965572 TGTACGGCCAACCAGTATAC 57.034 50.000 2.24 0.00 34.57 1.47
2880 3607 2.177734 TGTACGGCCAACCAGTATACA 58.822 47.619 2.24 0.00 34.57 2.29
2881 3608 2.767394 TGTACGGCCAACCAGTATACAT 59.233 45.455 2.24 0.00 34.57 2.29
2882 3609 2.614829 ACGGCCAACCAGTATACATC 57.385 50.000 2.24 0.00 34.57 3.06
2883 3610 2.116238 ACGGCCAACCAGTATACATCT 58.884 47.619 2.24 0.00 34.57 2.90
2884 3611 2.158957 ACGGCCAACCAGTATACATCTG 60.159 50.000 2.24 0.00 34.57 2.90
2910 3637 9.875691 GGATAATATGGAATTAAAAAGGATGGC 57.124 33.333 0.00 0.00 0.00 4.40
2913 3640 4.470334 TGGAATTAAAAAGGATGGCAGC 57.530 40.909 0.00 0.00 0.00 5.25
2914 3641 3.837146 TGGAATTAAAAAGGATGGCAGCA 59.163 39.130 4.64 0.00 0.00 4.41
2917 3644 5.482006 GAATTAAAAAGGATGGCAGCAACT 58.518 37.500 4.64 0.00 0.00 3.16
2922 3649 2.706339 AGGATGGCAGCAACTAAGAG 57.294 50.000 4.64 0.00 0.00 2.85
2937 3664 4.962155 ACTAAGAGGAACCTTTCACACAG 58.038 43.478 0.00 0.00 0.00 3.66
2941 3668 5.053978 AGAGGAACCTTTCACACAGAATT 57.946 39.130 0.00 0.00 35.83 2.17
2977 3704 3.730715 GCTACAAAATGTCACAACACAGC 59.269 43.478 0.00 0.00 38.48 4.40
2988 3715 3.951037 TCACAACACAGCTACACCAAATT 59.049 39.130 0.00 0.00 0.00 1.82
2994 3721 2.161855 CAGCTACACCAAATTCAGCCA 58.838 47.619 0.00 0.00 32.58 4.75
2995 3722 2.095059 CAGCTACACCAAATTCAGCCAC 60.095 50.000 0.00 0.00 32.58 5.01
3024 3751 0.999406 CAGATACAACAGGCCGAACG 59.001 55.000 0.00 0.00 0.00 3.95
3049 3776 8.832521 CGGATTTATTTAGCACAAGGTACATAA 58.167 33.333 0.00 0.00 31.89 1.90
3087 3814 4.377839 TGAAATCCGAACAAAAGCACAA 57.622 36.364 0.00 0.00 0.00 3.33
3089 3816 4.564769 TGAAATCCGAACAAAAGCACAAAC 59.435 37.500 0.00 0.00 0.00 2.93
3102 3829 0.317269 CACAAACAAGCAGCACCGAG 60.317 55.000 0.00 0.00 0.00 4.63
3197 3926 4.036498 TCGATTATGAGGACTTTCTCCGTC 59.964 45.833 0.00 0.00 45.10 4.79
3317 4046 0.994247 ACCCCTGATGCATGTTCTCA 59.006 50.000 2.46 0.00 0.00 3.27
3342 4071 0.180171 CACATCGGTTCCCCTGCATA 59.820 55.000 0.00 0.00 0.00 3.14
3355 4084 3.445096 CCCCTGCATACCAAAGAAAGAAG 59.555 47.826 0.00 0.00 0.00 2.85
3357 4086 4.397417 CCCTGCATACCAAAGAAAGAAGAG 59.603 45.833 0.00 0.00 0.00 2.85
3368 4097 7.708322 ACCAAAGAAAGAAGAGAAAATTGAAGC 59.292 33.333 0.00 0.00 0.00 3.86
3420 4561 2.044946 GGCCGCACAGGGAAGAAT 60.045 61.111 0.00 0.00 41.48 2.40
3422 4563 2.464459 GCCGCACAGGGAAGAATCG 61.464 63.158 0.00 0.00 41.48 3.34
3423 4564 2.464459 CCGCACAGGGAAGAATCGC 61.464 63.158 0.00 0.00 38.73 4.58
3428 4569 2.176273 CAGGGAAGAATCGCAGCCG 61.176 63.158 0.00 0.00 40.79 5.52
3447 4588 1.003839 AGGCAGGCAATTCGTCGAA 60.004 52.632 10.61 10.61 0.00 3.71
3448 4589 0.392998 AGGCAGGCAATTCGTCGAAT 60.393 50.000 14.69 14.69 33.25 3.34
3453 4594 3.713288 CAGGCAATTCGTCGAATACCTA 58.287 45.455 28.58 3.74 36.92 3.08
3504 4645 3.741476 CACCAGAAAGGCGGCAGC 61.741 66.667 13.08 0.00 43.14 5.25
3553 4701 2.512515 GGTGGCGGTGAGATCAGC 60.513 66.667 1.92 1.92 40.68 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.203052 GGTACCGATCGACTCCAAACA 59.797 52.381 18.66 0.00 0.00 2.83
43 44 4.460263 TGTGATCCCTCAATTTATTCCGG 58.540 43.478 0.00 0.00 31.85 5.14
44 45 7.928307 ATATGTGATCCCTCAATTTATTCCG 57.072 36.000 0.00 0.00 31.85 4.30
60 61 7.916977 GTGATGTGCATGTGTTAAATATGTGAT 59.083 33.333 0.00 0.00 0.00 3.06
102 103 5.046663 TCAATCACACAACCTGAGTAGCATA 60.047 40.000 0.00 0.00 0.00 3.14
117 118 4.037690 GCACTCTGTTTTGTCAATCACAC 58.962 43.478 0.00 0.00 33.41 3.82
122 123 5.368145 TCTACTGCACTCTGTTTTGTCAAT 58.632 37.500 0.00 0.00 0.00 2.57
130 133 4.878397 GCCATATTTCTACTGCACTCTGTT 59.122 41.667 0.00 0.00 0.00 3.16
158 161 4.757657 TGTATTAGCGAAACACATGGTTGT 59.242 37.500 0.00 0.00 40.35 3.32
165 168 9.767684 CATTTATCTTTGTATTAGCGAAACACA 57.232 29.630 0.00 0.00 0.00 3.72
166 169 8.734030 GCATTTATCTTTGTATTAGCGAAACAC 58.266 33.333 0.00 0.00 0.00 3.32
205 213 6.248433 AGTTCTCCCAAAATAATTCAGAGCA 58.752 36.000 0.00 0.00 0.00 4.26
211 219 7.272731 GCACGTTAAGTTCTCCCAAAATAATTC 59.727 37.037 0.00 0.00 0.00 2.17
213 221 6.433093 AGCACGTTAAGTTCTCCCAAAATAAT 59.567 34.615 0.00 0.00 0.00 1.28
224 232 7.599245 GGCAAGATATATAGCACGTTAAGTTCT 59.401 37.037 0.07 0.00 0.00 3.01
235 243 9.056005 CACAAAACTTAGGCAAGATATATAGCA 57.944 33.333 0.07 0.00 35.60 3.49
252 260 3.556004 CCACCACCACAAACACAAAACTT 60.556 43.478 0.00 0.00 0.00 2.66
253 261 2.028567 CCACCACCACAAACACAAAACT 60.029 45.455 0.00 0.00 0.00 2.66
254 262 2.342179 CCACCACCACAAACACAAAAC 58.658 47.619 0.00 0.00 0.00 2.43
255 263 1.276421 CCCACCACCACAAACACAAAA 59.724 47.619 0.00 0.00 0.00 2.44
256 264 0.898320 CCCACCACCACAAACACAAA 59.102 50.000 0.00 0.00 0.00 2.83
257 265 0.972983 CCCCACCACCACAAACACAA 60.973 55.000 0.00 0.00 0.00 3.33
258 266 1.380515 CCCCACCACCACAAACACA 60.381 57.895 0.00 0.00 0.00 3.72
259 267 1.380650 ACCCCACCACCACAAACAC 60.381 57.895 0.00 0.00 0.00 3.32
260 268 1.380515 CACCCCACCACCACAAACA 60.381 57.895 0.00 0.00 0.00 2.83
261 269 2.131067 CCACCCCACCACCACAAAC 61.131 63.158 0.00 0.00 0.00 2.93
262 270 2.280416 CCACCCCACCACCACAAA 59.720 61.111 0.00 0.00 0.00 2.83
263 271 3.826822 CCCACCCCACCACCACAA 61.827 66.667 0.00 0.00 0.00 3.33
271 279 3.749284 AAACACAGCCCCACCCCAC 62.749 63.158 0.00 0.00 0.00 4.61
272 280 2.937959 GAAAACACAGCCCCACCCCA 62.938 60.000 0.00 0.00 0.00 4.96
273 281 2.123033 AAAACACAGCCCCACCCC 60.123 61.111 0.00 0.00 0.00 4.95
274 282 0.831711 ATGAAAACACAGCCCCACCC 60.832 55.000 0.00 0.00 0.00 4.61
275 283 1.917872 TATGAAAACACAGCCCCACC 58.082 50.000 0.00 0.00 0.00 4.61
276 284 3.153919 TCTTATGAAAACACAGCCCCAC 58.846 45.455 0.00 0.00 0.00 4.61
277 285 3.420893 CTCTTATGAAAACACAGCCCCA 58.579 45.455 0.00 0.00 0.00 4.96
278 286 2.164422 GCTCTTATGAAAACACAGCCCC 59.836 50.000 0.00 0.00 0.00 5.80
279 287 2.819608 TGCTCTTATGAAAACACAGCCC 59.180 45.455 0.00 0.00 0.00 5.19
280 288 4.503741 TTGCTCTTATGAAAACACAGCC 57.496 40.909 0.00 0.00 0.00 4.85
281 289 6.826893 TTTTTGCTCTTATGAAAACACAGC 57.173 33.333 0.00 0.00 0.00 4.40
349 357 9.971922 CTTCCAAGATTTTCAACTTTCTAACAT 57.028 29.630 0.00 0.00 0.00 2.71
350 358 8.966868 ACTTCCAAGATTTTCAACTTTCTAACA 58.033 29.630 0.00 0.00 0.00 2.41
351 359 9.803315 AACTTCCAAGATTTTCAACTTTCTAAC 57.197 29.630 0.00 0.00 0.00 2.34
353 361 9.184523 TGAACTTCCAAGATTTTCAACTTTCTA 57.815 29.630 0.00 0.00 0.00 2.10
354 362 8.066612 TGAACTTCCAAGATTTTCAACTTTCT 57.933 30.769 0.00 0.00 0.00 2.52
355 363 8.702163 TTGAACTTCCAAGATTTTCAACTTTC 57.298 30.769 0.00 0.00 32.57 2.62
356 364 8.935844 GTTTGAACTTCCAAGATTTTCAACTTT 58.064 29.630 4.06 0.00 36.24 2.66
357 365 8.314021 AGTTTGAACTTCCAAGATTTTCAACTT 58.686 29.630 4.06 0.00 36.24 2.66
358 366 7.840931 AGTTTGAACTTCCAAGATTTTCAACT 58.159 30.769 4.06 0.00 36.24 3.16
359 367 8.382875 CAAGTTTGAACTTCCAAGATTTTCAAC 58.617 33.333 6.16 0.00 45.65 3.18
360 368 7.548780 CCAAGTTTGAACTTCCAAGATTTTCAA 59.451 33.333 6.16 0.00 45.65 2.69
361 369 7.041107 CCAAGTTTGAACTTCCAAGATTTTCA 58.959 34.615 6.16 0.00 45.65 2.69
362 370 7.264947 TCCAAGTTTGAACTTCCAAGATTTTC 58.735 34.615 6.16 0.00 45.65 2.29
363 371 7.181569 TCCAAGTTTGAACTTCCAAGATTTT 57.818 32.000 6.16 0.00 45.65 1.82
364 372 6.790232 TCCAAGTTTGAACTTCCAAGATTT 57.210 33.333 6.16 0.00 45.65 2.17
365 373 6.381133 AGTTCCAAGTTTGAACTTCCAAGATT 59.619 34.615 14.87 0.00 45.65 2.40
366 374 5.893824 AGTTCCAAGTTTGAACTTCCAAGAT 59.106 36.000 14.87 0.00 45.65 2.40
367 375 5.261216 AGTTCCAAGTTTGAACTTCCAAGA 58.739 37.500 14.87 0.07 45.65 3.02
368 376 5.582689 AGTTCCAAGTTTGAACTTCCAAG 57.417 39.130 14.87 0.00 45.65 3.61
369 377 5.993748 AAGTTCCAAGTTTGAACTTCCAA 57.006 34.783 22.86 0.53 45.65 3.53
370 378 5.719173 CAAAGTTCCAAGTTTGAACTTCCA 58.281 37.500 26.52 0.00 45.65 3.53
378 386 4.869861 CCAACCTTCAAAGTTCCAAGTTTG 59.130 41.667 11.82 11.82 45.97 2.93
379 387 4.775253 TCCAACCTTCAAAGTTCCAAGTTT 59.225 37.500 0.00 0.00 31.98 2.66
380 388 4.349365 TCCAACCTTCAAAGTTCCAAGTT 58.651 39.130 0.00 0.00 0.00 2.66
381 389 3.976015 TCCAACCTTCAAAGTTCCAAGT 58.024 40.909 0.00 0.00 0.00 3.16
382 390 4.402474 ACTTCCAACCTTCAAAGTTCCAAG 59.598 41.667 0.00 0.00 0.00 3.61
383 391 4.349365 ACTTCCAACCTTCAAAGTTCCAA 58.651 39.130 0.00 0.00 0.00 3.53
384 392 3.976015 ACTTCCAACCTTCAAAGTTCCA 58.024 40.909 0.00 0.00 0.00 3.53
385 393 6.040504 ACAATACTTCCAACCTTCAAAGTTCC 59.959 38.462 0.00 0.00 34.09 3.62
386 394 6.918022 CACAATACTTCCAACCTTCAAAGTTC 59.082 38.462 0.00 0.00 34.09 3.01
387 395 6.379988 ACACAATACTTCCAACCTTCAAAGTT 59.620 34.615 0.00 0.00 34.09 2.66
388 396 5.891551 ACACAATACTTCCAACCTTCAAAGT 59.108 36.000 0.00 0.00 36.09 2.66
389 397 6.391227 ACACAATACTTCCAACCTTCAAAG 57.609 37.500 0.00 0.00 0.00 2.77
390 398 6.783708 AACACAATACTTCCAACCTTCAAA 57.216 33.333 0.00 0.00 0.00 2.69
391 399 6.568869 CAAACACAATACTTCCAACCTTCAA 58.431 36.000 0.00 0.00 0.00 2.69
392 400 5.451242 GCAAACACAATACTTCCAACCTTCA 60.451 40.000 0.00 0.00 0.00 3.02
393 401 4.982295 GCAAACACAATACTTCCAACCTTC 59.018 41.667 0.00 0.00 0.00 3.46
394 402 4.499019 CGCAAACACAATACTTCCAACCTT 60.499 41.667 0.00 0.00 0.00 3.50
395 403 3.004315 CGCAAACACAATACTTCCAACCT 59.996 43.478 0.00 0.00 0.00 3.50
396 404 3.305110 CGCAAACACAATACTTCCAACC 58.695 45.455 0.00 0.00 0.00 3.77
397 405 3.243267 ACCGCAAACACAATACTTCCAAC 60.243 43.478 0.00 0.00 0.00 3.77
398 406 2.952978 ACCGCAAACACAATACTTCCAA 59.047 40.909 0.00 0.00 0.00 3.53
399 407 2.292016 CACCGCAAACACAATACTTCCA 59.708 45.455 0.00 0.00 0.00 3.53
400 408 2.351350 CCACCGCAAACACAATACTTCC 60.351 50.000 0.00 0.00 0.00 3.46
401 409 2.292292 ACCACCGCAAACACAATACTTC 59.708 45.455 0.00 0.00 0.00 3.01
406 414 1.739049 CCACCACCGCAAACACAAT 59.261 52.632 0.00 0.00 0.00 2.71
460 468 3.132467 CGGAGGGAGTAGAACTTTTAGGG 59.868 52.174 0.00 0.00 0.00 3.53
461 469 3.768215 ACGGAGGGAGTAGAACTTTTAGG 59.232 47.826 0.00 0.00 0.00 2.69
462 470 5.402997 AACGGAGGGAGTAGAACTTTTAG 57.597 43.478 0.00 0.00 0.00 1.85
464 472 3.007723 GGAACGGAGGGAGTAGAACTTTT 59.992 47.826 0.00 0.00 0.00 2.27
465 473 2.566279 GGAACGGAGGGAGTAGAACTTT 59.434 50.000 0.00 0.00 0.00 2.66
466 474 2.177734 GGAACGGAGGGAGTAGAACTT 58.822 52.381 0.00 0.00 0.00 2.66
467 475 1.358445 AGGAACGGAGGGAGTAGAACT 59.642 52.381 0.00 0.00 0.00 3.01
468 476 1.849977 AGGAACGGAGGGAGTAGAAC 58.150 55.000 0.00 0.00 0.00 3.01
469 477 3.744940 TTAGGAACGGAGGGAGTAGAA 57.255 47.619 0.00 0.00 0.00 2.10
470 478 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
471 479 7.450944 ACTTATATTTAGGAACGGAGGGAGTAG 59.549 40.741 0.00 0.00 0.00 2.57
472 480 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
473 481 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
474 482 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
475 483 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
476 484 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
477 485 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
478 486 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
494 502 8.816894 TCCATAGTGAAATCTCTACAAAGACTT 58.183 33.333 0.00 0.00 0.00 3.01
495 503 8.254508 GTCCATAGTGAAATCTCTACAAAGACT 58.745 37.037 0.00 0.00 0.00 3.24
496 504 8.254508 AGTCCATAGTGAAATCTCTACAAAGAC 58.745 37.037 0.00 0.00 0.00 3.01
497 505 8.367660 AGTCCATAGTGAAATCTCTACAAAGA 57.632 34.615 0.00 0.00 0.00 2.52
498 506 9.522804 GTAGTCCATAGTGAAATCTCTACAAAG 57.477 37.037 0.00 0.00 0.00 2.77
499 507 9.031537 TGTAGTCCATAGTGAAATCTCTACAAA 57.968 33.333 0.00 0.00 34.46 2.83
500 508 8.589701 TGTAGTCCATAGTGAAATCTCTACAA 57.410 34.615 0.00 0.00 34.46 2.41
501 509 8.633561 CATGTAGTCCATAGTGAAATCTCTACA 58.366 37.037 0.00 0.00 39.19 2.74
502 510 7.596995 GCATGTAGTCCATAGTGAAATCTCTAC 59.403 40.741 0.00 0.00 30.71 2.59
503 511 7.507277 AGCATGTAGTCCATAGTGAAATCTCTA 59.493 37.037 0.00 0.00 30.71 2.43
504 512 6.326064 AGCATGTAGTCCATAGTGAAATCTCT 59.674 38.462 0.00 0.00 30.71 3.10
505 513 6.520272 AGCATGTAGTCCATAGTGAAATCTC 58.480 40.000 0.00 0.00 30.71 2.75
506 514 6.491714 AGCATGTAGTCCATAGTGAAATCT 57.508 37.500 0.00 0.00 30.71 2.40
507 515 6.989169 AGAAGCATGTAGTCCATAGTGAAATC 59.011 38.462 0.00 0.00 30.71 2.17
508 516 6.765036 CAGAAGCATGTAGTCCATAGTGAAAT 59.235 38.462 0.00 0.00 30.71 2.17
509 517 6.070824 TCAGAAGCATGTAGTCCATAGTGAAA 60.071 38.462 0.00 0.00 30.71 2.69
510 518 5.422012 TCAGAAGCATGTAGTCCATAGTGAA 59.578 40.000 0.00 0.00 30.71 3.18
511 519 4.956075 TCAGAAGCATGTAGTCCATAGTGA 59.044 41.667 0.00 0.00 30.71 3.41
512 520 5.068329 TCTCAGAAGCATGTAGTCCATAGTG 59.932 44.000 0.00 0.00 30.71 2.74
513 521 5.204292 TCTCAGAAGCATGTAGTCCATAGT 58.796 41.667 0.00 0.00 30.71 2.12
514 522 5.301551 ACTCTCAGAAGCATGTAGTCCATAG 59.698 44.000 0.00 0.00 30.71 2.23
515 523 5.204292 ACTCTCAGAAGCATGTAGTCCATA 58.796 41.667 0.00 0.00 30.71 2.74
516 524 4.029520 ACTCTCAGAAGCATGTAGTCCAT 58.970 43.478 0.00 0.00 0.00 3.41
517 525 3.435275 ACTCTCAGAAGCATGTAGTCCA 58.565 45.455 0.00 0.00 0.00 4.02
518 526 4.081972 TGAACTCTCAGAAGCATGTAGTCC 60.082 45.833 0.00 0.00 0.00 3.85
519 527 5.065704 TGAACTCTCAGAAGCATGTAGTC 57.934 43.478 0.00 0.00 0.00 2.59
520 528 5.474578 TTGAACTCTCAGAAGCATGTAGT 57.525 39.130 0.00 0.00 31.69 2.73
521 529 4.329528 GCTTGAACTCTCAGAAGCATGTAG 59.670 45.833 0.00 0.00 36.05 2.74
522 530 4.020751 AGCTTGAACTCTCAGAAGCATGTA 60.021 41.667 0.00 0.00 37.73 2.29
523 531 3.072944 GCTTGAACTCTCAGAAGCATGT 58.927 45.455 0.00 0.00 36.05 3.21
524 532 3.336468 AGCTTGAACTCTCAGAAGCATG 58.664 45.455 0.00 0.00 37.73 4.06
525 533 3.261390 AGAGCTTGAACTCTCAGAAGCAT 59.739 43.478 0.00 0.00 43.68 3.79
526 534 2.632028 AGAGCTTGAACTCTCAGAAGCA 59.368 45.455 0.00 0.00 43.68 3.91
527 535 3.317603 AGAGCTTGAACTCTCAGAAGC 57.682 47.619 0.00 0.00 43.68 3.86
535 543 7.031975 CCCAAAATAATTGAGAGCTTGAACTC 58.968 38.462 0.00 0.00 36.91 3.01
536 544 6.721208 TCCCAAAATAATTGAGAGCTTGAACT 59.279 34.615 0.00 0.00 0.00 3.01
537 545 6.924111 TCCCAAAATAATTGAGAGCTTGAAC 58.076 36.000 0.00 0.00 0.00 3.18
538 546 6.947733 TCTCCCAAAATAATTGAGAGCTTGAA 59.052 34.615 0.00 0.00 0.00 2.69
539 547 6.484288 TCTCCCAAAATAATTGAGAGCTTGA 58.516 36.000 0.00 0.00 0.00 3.02
540 548 6.764308 TCTCCCAAAATAATTGAGAGCTTG 57.236 37.500 0.00 0.00 0.00 4.01
541 549 6.950619 AGTTCTCCCAAAATAATTGAGAGCTT 59.049 34.615 0.00 0.00 39.59 3.74
542 550 6.488715 AGTTCTCCCAAAATAATTGAGAGCT 58.511 36.000 0.00 0.00 38.35 4.09
543 551 6.765915 AGTTCTCCCAAAATAATTGAGAGC 57.234 37.500 0.00 0.00 33.92 4.09
544 552 9.454859 AGTAAGTTCTCCCAAAATAATTGAGAG 57.545 33.333 0.00 0.00 33.92 3.20
545 553 9.231297 CAGTAAGTTCTCCCAAAATAATTGAGA 57.769 33.333 0.00 0.00 0.00 3.27
546 554 7.970614 GCAGTAAGTTCTCCCAAAATAATTGAG 59.029 37.037 0.00 0.00 0.00 3.02
547 555 7.093945 GGCAGTAAGTTCTCCCAAAATAATTGA 60.094 37.037 0.00 0.00 0.00 2.57
548 556 7.035612 GGCAGTAAGTTCTCCCAAAATAATTG 58.964 38.462 0.00 0.00 0.00 2.32
549 557 6.954102 AGGCAGTAAGTTCTCCCAAAATAATT 59.046 34.615 0.00 0.00 0.00 1.40
550 558 6.494059 AGGCAGTAAGTTCTCCCAAAATAAT 58.506 36.000 0.00 0.00 0.00 1.28
551 559 5.887754 AGGCAGTAAGTTCTCCCAAAATAA 58.112 37.500 0.00 0.00 0.00 1.40
552 560 5.514500 AGGCAGTAAGTTCTCCCAAAATA 57.486 39.130 0.00 0.00 0.00 1.40
553 561 4.388577 AGGCAGTAAGTTCTCCCAAAAT 57.611 40.909 0.00 0.00 0.00 1.82
554 562 3.876309 AGGCAGTAAGTTCTCCCAAAA 57.124 42.857 0.00 0.00 0.00 2.44
555 563 6.824958 ATATAGGCAGTAAGTTCTCCCAAA 57.175 37.500 0.00 0.00 0.00 3.28
556 564 7.956315 AGATATATAGGCAGTAAGTTCTCCCAA 59.044 37.037 0.00 0.00 0.00 4.12
557 565 7.479579 AGATATATAGGCAGTAAGTTCTCCCA 58.520 38.462 0.00 0.00 0.00 4.37
558 566 7.964666 AGATATATAGGCAGTAAGTTCTCCC 57.035 40.000 0.00 0.00 0.00 4.30
559 567 7.762159 GCAAGATATATAGGCAGTAAGTTCTCC 59.238 40.741 0.00 0.00 0.00 3.71
560 568 7.762159 GGCAAGATATATAGGCAGTAAGTTCTC 59.238 40.741 5.44 0.00 0.00 2.87
561 569 7.456269 AGGCAAGATATATAGGCAGTAAGTTCT 59.544 37.037 8.07 0.00 0.00 3.01
562 570 7.616313 AGGCAAGATATATAGGCAGTAAGTTC 58.384 38.462 8.07 0.00 0.00 3.01
563 571 7.560796 AGGCAAGATATATAGGCAGTAAGTT 57.439 36.000 8.07 0.00 0.00 2.66
564 572 8.666129 TTAGGCAAGATATATAGGCAGTAAGT 57.334 34.615 8.07 0.00 0.00 2.24
568 576 9.813826 AAAATTTAGGCAAGATATATAGGCAGT 57.186 29.630 0.00 0.00 0.00 4.40
570 578 9.586732 ACAAAATTTAGGCAAGATATATAGGCA 57.413 29.630 0.00 0.00 0.00 4.75
571 579 9.846248 CACAAAATTTAGGCAAGATATATAGGC 57.154 33.333 0.00 0.00 0.00 3.93
577 585 9.206870 CACAAACACAAAATTTAGGCAAGATAT 57.793 29.630 0.00 0.00 0.00 1.63
578 586 7.655328 CCACAAACACAAAATTTAGGCAAGATA 59.345 33.333 0.00 0.00 0.00 1.98
579 587 6.482973 CCACAAACACAAAATTTAGGCAAGAT 59.517 34.615 0.00 0.00 0.00 2.40
580 588 5.814705 CCACAAACACAAAATTTAGGCAAGA 59.185 36.000 0.00 0.00 0.00 3.02
581 589 5.584251 ACCACAAACACAAAATTTAGGCAAG 59.416 36.000 0.00 0.00 0.00 4.01
582 590 5.352569 CACCACAAACACAAAATTTAGGCAA 59.647 36.000 0.00 0.00 0.00 4.52
583 591 4.872691 CACCACAAACACAAAATTTAGGCA 59.127 37.500 0.00 0.00 0.00 4.75
584 592 4.272261 CCACCACAAACACAAAATTTAGGC 59.728 41.667 0.00 0.00 0.00 3.93
585 593 4.272261 GCCACCACAAACACAAAATTTAGG 59.728 41.667 0.00 0.00 0.00 2.69
586 594 4.026145 CGCCACCACAAACACAAAATTTAG 60.026 41.667 0.00 0.00 0.00 1.85
587 595 3.865745 CGCCACCACAAACACAAAATTTA 59.134 39.130 0.00 0.00 0.00 1.40
588 596 2.675348 CGCCACCACAAACACAAAATTT 59.325 40.909 0.00 0.00 0.00 1.82
589 597 2.275318 CGCCACCACAAACACAAAATT 58.725 42.857 0.00 0.00 0.00 1.82
590 598 1.472376 CCGCCACCACAAACACAAAAT 60.472 47.619 0.00 0.00 0.00 1.82
591 599 0.108615 CCGCCACCACAAACACAAAA 60.109 50.000 0.00 0.00 0.00 2.44
592 600 1.513158 CCGCCACCACAAACACAAA 59.487 52.632 0.00 0.00 0.00 2.83
593 601 2.418910 CCCGCCACCACAAACACAA 61.419 57.895 0.00 0.00 0.00 3.33
594 602 2.830827 CCCGCCACCACAAACACA 60.831 61.111 0.00 0.00 0.00 3.72
595 603 3.601685 CCCCGCCACCACAAACAC 61.602 66.667 0.00 0.00 0.00 3.32
596 604 4.130554 ACCCCGCCACCACAAACA 62.131 61.111 0.00 0.00 0.00 2.83
597 605 3.601685 CACCCCGCCACCACAAAC 61.602 66.667 0.00 0.00 0.00 2.93
598 606 3.783362 CTCACCCCGCCACCACAAA 62.783 63.158 0.00 0.00 0.00 2.83
599 607 4.263572 CTCACCCCGCCACCACAA 62.264 66.667 0.00 0.00 0.00 3.33
607 615 4.626081 ACACACAGCTCACCCCGC 62.626 66.667 0.00 0.00 0.00 6.13
608 616 1.961277 GAACACACAGCTCACCCCG 60.961 63.158 0.00 0.00 0.00 5.73
609 617 0.465460 TTGAACACACAGCTCACCCC 60.465 55.000 0.00 0.00 0.00 4.95
610 618 1.388547 TTTGAACACACAGCTCACCC 58.611 50.000 0.00 0.00 0.00 4.61
611 619 2.682856 TCTTTTGAACACACAGCTCACC 59.317 45.455 0.00 0.00 0.00 4.02
612 620 3.487544 GGTCTTTTGAACACACAGCTCAC 60.488 47.826 0.00 0.00 35.86 3.51
613 621 2.682856 GGTCTTTTGAACACACAGCTCA 59.317 45.455 0.00 0.00 35.86 4.26
614 622 2.682856 TGGTCTTTTGAACACACAGCTC 59.317 45.455 0.00 0.00 41.97 4.09
615 623 2.722094 TGGTCTTTTGAACACACAGCT 58.278 42.857 0.00 0.00 41.97 4.24
622 630 4.891992 TTTTTGGGTGGTCTTTTGAACA 57.108 36.364 0.00 0.00 45.11 3.18
674 682 4.350368 TCTAGCATTTGAACACTCCACA 57.650 40.909 0.00 0.00 0.00 4.17
675 683 5.239525 ACTTTCTAGCATTTGAACACTCCAC 59.760 40.000 0.00 0.00 0.00 4.02
676 684 5.376625 ACTTTCTAGCATTTGAACACTCCA 58.623 37.500 0.00 0.00 0.00 3.86
677 685 5.703130 AGACTTTCTAGCATTTGAACACTCC 59.297 40.000 0.00 0.00 0.00 3.85
678 686 6.793492 AGACTTTCTAGCATTTGAACACTC 57.207 37.500 0.00 0.00 0.00 3.51
680 688 9.170584 GTTTTAGACTTTCTAGCATTTGAACAC 57.829 33.333 0.00 0.00 29.56 3.32
681 689 8.349983 GGTTTTAGACTTTCTAGCATTTGAACA 58.650 33.333 0.00 0.00 29.56 3.18
691 700 8.678593 AACTTCCAAGGTTTTAGACTTTCTAG 57.321 34.615 0.00 0.00 29.56 2.43
693 702 7.116736 TGAACTTCCAAGGTTTTAGACTTTCT 58.883 34.615 0.00 0.00 0.00 2.52
722 1010 1.291877 CCGAACCGTCAAAGCTCCAG 61.292 60.000 0.00 0.00 0.00 3.86
750 1039 8.017587 AGGAAATTCACGCAATTGTAAATTTC 57.982 30.769 23.53 23.53 40.12 2.17
754 1043 6.640499 CAGAAGGAAATTCACGCAATTGTAAA 59.360 34.615 7.40 0.00 40.67 2.01
755 1044 6.016693 TCAGAAGGAAATTCACGCAATTGTAA 60.017 34.615 7.40 0.00 40.67 2.41
757 1046 4.278170 TCAGAAGGAAATTCACGCAATTGT 59.722 37.500 7.40 0.00 40.67 2.71
782 1071 5.741982 CAGGTTTTCAAACTTTCGACGAAAT 59.258 36.000 22.30 7.03 38.89 2.17
784 1073 4.392445 TCAGGTTTTCAAACTTTCGACGAA 59.608 37.500 6.10 6.10 38.89 3.85
786 1075 4.267357 TCAGGTTTTCAAACTTTCGACG 57.733 40.909 2.55 0.00 38.89 5.12
816 1105 3.811722 TTGACATCGTTCAATCTGCAC 57.188 42.857 0.00 0.00 30.29 4.57
820 1109 4.847365 CGACATTGACATCGTTCAATCT 57.153 40.909 6.67 0.00 43.08 2.40
843 1140 0.387622 TTGGCGAACGTCGTAGAAGG 60.388 55.000 0.00 0.00 42.81 3.46
850 1147 1.011968 TCTCCATTTGGCGAACGTCG 61.012 55.000 0.00 0.00 43.89 5.12
878 1190 4.985538 TTTTTAAAAGAGGGTGAACGCA 57.014 36.364 0.14 0.00 0.00 5.24
902 1228 2.033602 GCCGGCCCAACTACTGTT 59.966 61.111 18.11 0.00 36.75 3.16
924 1250 2.666508 CGTTCAATATCTATTCGGCCCG 59.333 50.000 0.00 0.00 0.00 6.13
930 1256 7.358066 TCGAGTACACCGTTCAATATCTATTC 58.642 38.462 0.00 0.00 0.00 1.75
932 1258 6.485984 ACTCGAGTACACCGTTCAATATCTAT 59.514 38.462 18.46 0.00 0.00 1.98
934 1260 4.639310 ACTCGAGTACACCGTTCAATATCT 59.361 41.667 18.46 0.00 0.00 1.98
935 1261 4.733887 CACTCGAGTACACCGTTCAATATC 59.266 45.833 19.57 0.00 0.00 1.63
937 1263 3.119743 CCACTCGAGTACACCGTTCAATA 60.120 47.826 19.57 0.00 0.00 1.90
964 1292 4.596212 AGTGGGATGCTGATGATAAGATCA 59.404 41.667 0.00 0.00 44.55 2.92
965 1293 5.163281 AGTGGGATGCTGATGATAAGATC 57.837 43.478 0.00 0.00 0.00 2.75
1006 1335 0.959553 TATCCCTTCGACGATGGAGC 59.040 55.000 26.59 0.00 0.00 4.70
1229 1602 3.168604 CGCGTCAGTCAGTCAGCG 61.169 66.667 0.00 0.00 41.56 5.18
1252 1629 4.760047 CGGGTCCTGCGTCCCAAG 62.760 72.222 0.00 0.00 43.57 3.61
1429 1810 2.745884 CGGACGGAATTGCAGCCA 60.746 61.111 0.00 0.00 0.00 4.75
1430 1811 2.746277 ACGGACGGAATTGCAGCC 60.746 61.111 0.00 0.00 0.00 4.85
1431 1812 2.785258 GACGGACGGAATTGCAGC 59.215 61.111 0.00 0.00 0.00 5.25
1432 1813 1.413767 CTCGACGGACGGAATTGCAG 61.414 60.000 0.00 0.00 42.82 4.41
1436 1817 1.445582 GTGCTCGACGGACGGAATT 60.446 57.895 0.00 0.00 42.82 2.17
1460 1841 3.984193 CTCAGGCCGGCAAGGGAAG 62.984 68.421 30.85 12.20 41.48 3.46
1710 2099 5.065731 CAGAGGAAGCAGGTTGAAATGTATC 59.934 44.000 0.00 0.00 0.00 2.24
1809 2208 3.122297 CTCGATCAGCCTGTCTTCATTC 58.878 50.000 0.00 0.00 0.00 2.67
1866 2265 6.262273 GGAGTTAAGATTTTGTTCACTGACCA 59.738 38.462 0.00 0.00 0.00 4.02
1896 2611 7.035840 AGCTTGGATTATTATTCAGCAAGTG 57.964 36.000 0.00 0.00 0.00 3.16
2093 2819 3.491766 ACTCCCTCCCAGATAAGTGAA 57.508 47.619 0.00 0.00 0.00 3.18
2106 2832 3.643792 AGCAGGTTCATACATACTCCCTC 59.356 47.826 0.00 0.00 0.00 4.30
2107 2833 3.389329 CAGCAGGTTCATACATACTCCCT 59.611 47.826 0.00 0.00 0.00 4.20
2108 2834 3.388024 TCAGCAGGTTCATACATACTCCC 59.612 47.826 0.00 0.00 0.00 4.30
2109 2835 4.100189 ACTCAGCAGGTTCATACATACTCC 59.900 45.833 0.00 0.00 0.00 3.85
2270 2996 4.079327 TCGGTTCTCCTTCCTTATAGAGGT 60.079 45.833 0.00 0.00 46.39 3.85
2335 3062 9.901724 CACACAAGTTTAGAATAAATAGTAGCG 57.098 33.333 0.00 0.00 0.00 4.26
2415 3142 8.988064 ATACCGTTATGTATTTCAGCATAGAG 57.012 34.615 0.00 0.00 0.00 2.43
2481 3208 1.130749 CGAAGACGACTCCAGTACCAG 59.869 57.143 0.00 0.00 42.66 4.00
2485 3212 0.607217 TGCCGAAGACGACTCCAGTA 60.607 55.000 0.00 0.00 42.66 2.74
2508 3235 6.313658 GCTCCATTGAATTAATTCCAACAACC 59.686 38.462 22.42 5.89 35.97 3.77
2515 3242 9.468532 GAATTACAGCTCCATTGAATTAATTCC 57.531 33.333 22.42 7.75 35.97 3.01
2609 3336 6.588719 TGCCAATAAAGCTACTCACAATTT 57.411 33.333 0.00 0.00 0.00 1.82
2616 3343 6.743575 TTCTCTTTGCCAATAAAGCTACTC 57.256 37.500 0.00 0.00 37.53 2.59
2627 3354 7.950512 TGATCTTTACAATTTCTCTTTGCCAA 58.049 30.769 0.00 0.00 0.00 4.52
2648 3375 9.298774 GGTACAGCCGTAAAAGTATATATGATC 57.701 37.037 0.00 0.00 0.00 2.92
2660 3387 3.688694 ATCTGTGGTACAGCCGTAAAA 57.311 42.857 4.14 0.00 45.54 1.52
2662 3389 6.716173 TGTATATATCTGTGGTACAGCCGTAA 59.284 38.462 4.14 0.00 45.54 3.18
2678 3405 7.316640 AGCGGATCAGTCTTGTTGTATATATC 58.683 38.462 0.00 0.00 0.00 1.63
2680 3407 6.650427 AGCGGATCAGTCTTGTTGTATATA 57.350 37.500 0.00 0.00 0.00 0.86
2682 3409 5.339008 AAGCGGATCAGTCTTGTTGTATA 57.661 39.130 0.00 0.00 0.00 1.47
2696 3423 1.602377 CATAAACCGGGAAAGCGGATC 59.398 52.381 6.32 0.00 0.00 3.36
2697 3424 1.064979 ACATAAACCGGGAAAGCGGAT 60.065 47.619 6.32 0.00 0.00 4.18
2698 3425 0.325602 ACATAAACCGGGAAAGCGGA 59.674 50.000 6.32 0.00 0.00 5.54
2699 3426 0.730840 GACATAAACCGGGAAAGCGG 59.269 55.000 6.32 0.00 0.00 5.52
2700 3427 1.664151 GAGACATAAACCGGGAAAGCG 59.336 52.381 6.32 0.00 0.00 4.68
2701 3428 1.664151 CGAGACATAAACCGGGAAAGC 59.336 52.381 6.32 0.00 0.00 3.51
2702 3429 2.968675 ACGAGACATAAACCGGGAAAG 58.031 47.619 6.32 0.00 0.00 2.62
2703 3430 3.257873 TGTACGAGACATAAACCGGGAAA 59.742 43.478 6.32 0.00 31.20 3.13
2704 3431 2.824936 TGTACGAGACATAAACCGGGAA 59.175 45.455 6.32 0.00 31.20 3.97
2705 3432 2.445427 TGTACGAGACATAAACCGGGA 58.555 47.619 6.32 0.00 31.20 5.14
2706 3433 2.945447 TGTACGAGACATAAACCGGG 57.055 50.000 6.32 0.00 31.20 5.73
2715 3442 3.953712 ACCATGTCAATGTACGAGACA 57.046 42.857 14.54 14.54 45.26 3.41
2716 3443 4.669197 GCAAACCATGTCAATGTACGAGAC 60.669 45.833 0.00 5.50 31.27 3.36
2717 3444 3.435327 GCAAACCATGTCAATGTACGAGA 59.565 43.478 0.00 0.00 31.27 4.04
2718 3445 3.436704 AGCAAACCATGTCAATGTACGAG 59.563 43.478 0.00 0.00 31.27 4.18
2719 3446 3.188254 CAGCAAACCATGTCAATGTACGA 59.812 43.478 0.00 0.00 31.27 3.43
2720 3447 3.188254 TCAGCAAACCATGTCAATGTACG 59.812 43.478 0.00 0.00 31.27 3.67
2721 3448 4.764679 TCAGCAAACCATGTCAATGTAC 57.235 40.909 0.00 0.00 31.27 2.90
2722 3449 5.711506 AGATTCAGCAAACCATGTCAATGTA 59.288 36.000 0.00 0.00 31.27 2.29
2723 3450 4.525487 AGATTCAGCAAACCATGTCAATGT 59.475 37.500 0.00 0.00 31.27 2.71
2724 3451 4.862574 CAGATTCAGCAAACCATGTCAATG 59.137 41.667 0.00 0.00 0.00 2.82
2725 3452 4.619863 GCAGATTCAGCAAACCATGTCAAT 60.620 41.667 0.00 0.00 0.00 2.57
2726 3453 3.305539 GCAGATTCAGCAAACCATGTCAA 60.306 43.478 0.00 0.00 0.00 3.18
2727 3454 2.229543 GCAGATTCAGCAAACCATGTCA 59.770 45.455 0.00 0.00 0.00 3.58
2728 3455 2.490903 AGCAGATTCAGCAAACCATGTC 59.509 45.455 3.76 0.00 0.00 3.06
2729 3456 2.230508 CAGCAGATTCAGCAAACCATGT 59.769 45.455 3.76 0.00 0.00 3.21
2730 3457 2.416836 CCAGCAGATTCAGCAAACCATG 60.417 50.000 3.76 0.00 0.00 3.66
2731 3458 1.822990 CCAGCAGATTCAGCAAACCAT 59.177 47.619 3.76 0.00 0.00 3.55
2732 3459 1.250328 CCAGCAGATTCAGCAAACCA 58.750 50.000 3.76 0.00 0.00 3.67
2733 3460 1.068055 CACCAGCAGATTCAGCAAACC 60.068 52.381 3.76 0.00 0.00 3.27
2734 3461 1.610522 ACACCAGCAGATTCAGCAAAC 59.389 47.619 3.76 0.00 0.00 2.93
2735 3462 1.985473 ACACCAGCAGATTCAGCAAA 58.015 45.000 3.76 0.00 0.00 3.68
2736 3463 1.985473 AACACCAGCAGATTCAGCAA 58.015 45.000 3.76 0.00 0.00 3.91
2737 3464 1.985473 AAACACCAGCAGATTCAGCA 58.015 45.000 3.76 0.00 0.00 4.41
2738 3465 4.708726 ATAAAACACCAGCAGATTCAGC 57.291 40.909 0.00 0.00 0.00 4.26
2739 3466 7.094634 ACTGTAATAAAACACCAGCAGATTCAG 60.095 37.037 0.00 0.00 0.00 3.02
2740 3467 6.714810 ACTGTAATAAAACACCAGCAGATTCA 59.285 34.615 0.00 0.00 0.00 2.57
2741 3468 7.023575 CACTGTAATAAAACACCAGCAGATTC 58.976 38.462 0.00 0.00 0.00 2.52
2742 3469 6.714810 TCACTGTAATAAAACACCAGCAGATT 59.285 34.615 0.00 0.00 0.00 2.40
2743 3470 6.237901 TCACTGTAATAAAACACCAGCAGAT 58.762 36.000 0.00 0.00 0.00 2.90
2744 3471 5.616270 TCACTGTAATAAAACACCAGCAGA 58.384 37.500 0.00 0.00 0.00 4.26
2745 3472 5.940192 TCACTGTAATAAAACACCAGCAG 57.060 39.130 0.00 0.00 0.00 4.24
2746 3473 5.590663 TGTTCACTGTAATAAAACACCAGCA 59.409 36.000 0.00 0.00 0.00 4.41
2747 3474 6.067263 TGTTCACTGTAATAAAACACCAGC 57.933 37.500 0.00 0.00 0.00 4.85
2748 3475 7.648142 ACATGTTCACTGTAATAAAACACCAG 58.352 34.615 0.00 0.00 33.11 4.00
2749 3476 7.575414 ACATGTTCACTGTAATAAAACACCA 57.425 32.000 0.00 0.00 33.11 4.17
2750 3477 8.561212 TGTACATGTTCACTGTAATAAAACACC 58.439 33.333 2.30 0.00 33.11 4.16
2779 3506 0.609662 TTGGTTACAGAGGCGGTACC 59.390 55.000 0.16 0.16 39.61 3.34
2780 3507 2.460757 TTTGGTTACAGAGGCGGTAC 57.539 50.000 0.00 0.00 0.00 3.34
2781 3508 6.324512 TCTTATATTTGGTTACAGAGGCGGTA 59.675 38.462 0.00 0.00 0.00 4.02
2782 3509 3.926058 ATATTTGGTTACAGAGGCGGT 57.074 42.857 0.00 0.00 0.00 5.68
2783 3510 5.465724 GTCTTATATTTGGTTACAGAGGCGG 59.534 44.000 0.00 0.00 0.00 6.13
2784 3511 5.175126 CGTCTTATATTTGGTTACAGAGGCG 59.825 44.000 0.00 0.00 0.00 5.52
2785 3512 6.047231 ACGTCTTATATTTGGTTACAGAGGC 58.953 40.000 0.00 0.00 0.00 4.70
2786 3513 8.488651 AAACGTCTTATATTTGGTTACAGAGG 57.511 34.615 0.00 0.00 0.00 3.69
2789 3516 8.846607 GCAAAAACGTCTTATATTTGGTTACAG 58.153 33.333 0.00 0.00 32.91 2.74
2790 3517 8.350722 TGCAAAAACGTCTTATATTTGGTTACA 58.649 29.630 0.00 0.00 32.91 2.41
2791 3518 8.730970 TGCAAAAACGTCTTATATTTGGTTAC 57.269 30.769 0.00 0.00 32.91 2.50
2792 3519 8.569641 ACTGCAAAAACGTCTTATATTTGGTTA 58.430 29.630 0.00 0.00 32.91 2.85
2793 3520 7.430441 ACTGCAAAAACGTCTTATATTTGGTT 58.570 30.769 0.00 0.00 32.91 3.67
2794 3521 6.977213 ACTGCAAAAACGTCTTATATTTGGT 58.023 32.000 0.00 0.00 32.91 3.67
2795 3522 7.593273 TGAACTGCAAAAACGTCTTATATTTGG 59.407 33.333 0.00 0.00 32.91 3.28
2796 3523 8.500837 TGAACTGCAAAAACGTCTTATATTTG 57.499 30.769 0.00 0.00 34.84 2.32
2797 3524 9.522804 TTTGAACTGCAAAAACGTCTTATATTT 57.477 25.926 0.00 0.00 43.18 1.40
2798 3525 9.180678 CTTTGAACTGCAAAAACGTCTTATATT 57.819 29.630 0.00 0.00 45.26 1.28
2799 3526 8.349983 ACTTTGAACTGCAAAAACGTCTTATAT 58.650 29.630 0.00 0.00 45.26 0.86
2800 3527 7.699566 ACTTTGAACTGCAAAAACGTCTTATA 58.300 30.769 0.00 0.00 45.26 0.98
2801 3528 6.560711 ACTTTGAACTGCAAAAACGTCTTAT 58.439 32.000 0.00 0.00 45.26 1.73
2802 3529 5.945155 ACTTTGAACTGCAAAAACGTCTTA 58.055 33.333 0.00 0.00 45.26 2.10
2803 3530 4.805219 ACTTTGAACTGCAAAAACGTCTT 58.195 34.783 0.00 0.00 45.26 3.01
2804 3531 4.434713 ACTTTGAACTGCAAAAACGTCT 57.565 36.364 0.00 0.00 45.26 4.18
2805 3532 9.601971 TTATATACTTTGAACTGCAAAAACGTC 57.398 29.630 0.00 0.00 45.26 4.34
2812 3539 8.503196 CGCCATATTATATACTTTGAACTGCAA 58.497 33.333 0.00 0.00 33.88 4.08
2813 3540 7.119116 CCGCCATATTATATACTTTGAACTGCA 59.881 37.037 0.00 0.00 0.00 4.41
2814 3541 7.464358 CCGCCATATTATATACTTTGAACTGC 58.536 38.462 0.00 0.00 0.00 4.40
2815 3542 7.119116 TGCCGCCATATTATATACTTTGAACTG 59.881 37.037 0.00 0.00 0.00 3.16
2816 3543 7.119262 GTGCCGCCATATTATATACTTTGAACT 59.881 37.037 0.00 0.00 0.00 3.01
2817 3544 7.094975 TGTGCCGCCATATTATATACTTTGAAC 60.095 37.037 0.00 0.00 0.00 3.18
2818 3545 6.937465 TGTGCCGCCATATTATATACTTTGAA 59.063 34.615 0.00 0.00 0.00 2.69
2819 3546 6.370442 GTGTGCCGCCATATTATATACTTTGA 59.630 38.462 0.00 0.00 0.00 2.69
2820 3547 6.148645 TGTGTGCCGCCATATTATATACTTTG 59.851 38.462 0.00 0.00 0.00 2.77
2821 3548 6.234920 TGTGTGCCGCCATATTATATACTTT 58.765 36.000 0.00 0.00 0.00 2.66
2822 3549 5.800296 TGTGTGCCGCCATATTATATACTT 58.200 37.500 0.00 0.00 0.00 2.24
2823 3550 5.414789 TGTGTGCCGCCATATTATATACT 57.585 39.130 0.00 0.00 0.00 2.12
2824 3551 5.410132 TGTTGTGTGCCGCCATATTATATAC 59.590 40.000 0.00 0.00 0.00 1.47
2825 3552 5.552178 TGTTGTGTGCCGCCATATTATATA 58.448 37.500 0.00 0.00 0.00 0.86
2826 3553 4.393834 TGTTGTGTGCCGCCATATTATAT 58.606 39.130 0.00 0.00 0.00 0.86
2827 3554 3.809905 TGTTGTGTGCCGCCATATTATA 58.190 40.909 0.00 0.00 0.00 0.98
2828 3555 2.649190 TGTTGTGTGCCGCCATATTAT 58.351 42.857 0.00 0.00 0.00 1.28
2829 3556 2.115343 TGTTGTGTGCCGCCATATTA 57.885 45.000 0.00 0.00 0.00 0.98
2830 3557 1.067915 GTTGTTGTGTGCCGCCATATT 60.068 47.619 0.00 0.00 0.00 1.28
2831 3558 0.525761 GTTGTTGTGTGCCGCCATAT 59.474 50.000 0.00 0.00 0.00 1.78
2832 3559 0.536233 AGTTGTTGTGTGCCGCCATA 60.536 50.000 0.00 0.00 0.00 2.74
2833 3560 1.391157 AAGTTGTTGTGTGCCGCCAT 61.391 50.000 0.00 0.00 0.00 4.40
2834 3561 2.049185 AAGTTGTTGTGTGCCGCCA 61.049 52.632 0.00 0.00 0.00 5.69
2835 3562 1.588667 CAAGTTGTTGTGTGCCGCC 60.589 57.895 0.00 0.00 0.00 6.13
2836 3563 0.179150 TTCAAGTTGTTGTGTGCCGC 60.179 50.000 2.11 0.00 34.98 6.53
2837 3564 1.400142 TCTTCAAGTTGTTGTGTGCCG 59.600 47.619 2.11 0.00 34.98 5.69
2838 3565 3.715628 ATCTTCAAGTTGTTGTGTGCC 57.284 42.857 2.11 0.00 34.98 5.01
2839 3566 4.864247 ACAAATCTTCAAGTTGTTGTGTGC 59.136 37.500 7.72 0.00 43.26 4.57
2840 3567 6.194508 CGTACAAATCTTCAAGTTGTTGTGTG 59.805 38.462 15.38 6.96 43.26 3.82
2841 3568 6.255215 CGTACAAATCTTCAAGTTGTTGTGT 58.745 36.000 15.38 9.47 43.26 3.72
2842 3569 5.681105 CCGTACAAATCTTCAAGTTGTTGTG 59.319 40.000 15.38 3.95 43.26 3.33
2843 3570 5.732247 GCCGTACAAATCTTCAAGTTGTTGT 60.732 40.000 11.96 11.96 43.26 3.32
2844 3571 4.675114 GCCGTACAAATCTTCAAGTTGTTG 59.325 41.667 2.11 2.36 43.26 3.33
2845 3572 4.261447 GGCCGTACAAATCTTCAAGTTGTT 60.261 41.667 2.11 0.00 43.26 2.83
2847 3574 3.252215 TGGCCGTACAAATCTTCAAGTTG 59.748 43.478 0.00 0.00 38.87 3.16
2848 3575 3.482436 TGGCCGTACAAATCTTCAAGTT 58.518 40.909 0.00 0.00 0.00 2.66
2849 3576 3.134574 TGGCCGTACAAATCTTCAAGT 57.865 42.857 0.00 0.00 0.00 3.16
2850 3577 3.365969 GGTTGGCCGTACAAATCTTCAAG 60.366 47.826 9.72 0.00 31.17 3.02
2851 3578 2.554893 GGTTGGCCGTACAAATCTTCAA 59.445 45.455 9.72 0.00 31.17 2.69
2852 3579 2.156098 GGTTGGCCGTACAAATCTTCA 58.844 47.619 9.72 0.00 31.17 3.02
2853 3580 2.156098 TGGTTGGCCGTACAAATCTTC 58.844 47.619 9.72 0.00 37.67 2.87
2854 3581 2.159382 CTGGTTGGCCGTACAAATCTT 58.841 47.619 9.72 0.00 37.67 2.40
2855 3582 1.073284 ACTGGTTGGCCGTACAAATCT 59.927 47.619 9.72 0.00 37.67 2.40
2856 3583 1.530323 ACTGGTTGGCCGTACAAATC 58.470 50.000 9.72 0.00 37.67 2.17
2857 3584 2.863132 TACTGGTTGGCCGTACAAAT 57.137 45.000 9.72 0.00 37.67 2.32
2858 3585 2.863132 ATACTGGTTGGCCGTACAAA 57.137 45.000 9.72 0.00 37.67 2.83
2859 3586 2.566279 TGTATACTGGTTGGCCGTACAA 59.434 45.455 4.17 0.00 37.67 2.41
2860 3587 2.177734 TGTATACTGGTTGGCCGTACA 58.822 47.619 4.17 1.86 37.67 2.90
2861 3588 2.965572 TGTATACTGGTTGGCCGTAC 57.034 50.000 4.17 0.00 37.67 3.67
2862 3589 3.069016 CAGATGTATACTGGTTGGCCGTA 59.931 47.826 4.17 0.00 37.67 4.02
2863 3590 2.116238 AGATGTATACTGGTTGGCCGT 58.884 47.619 4.17 0.00 37.67 5.68
2864 3591 2.483876 CAGATGTATACTGGTTGGCCG 58.516 52.381 4.17 0.00 37.67 6.13
2865 3592 2.851195 CCAGATGTATACTGGTTGGCC 58.149 52.381 4.17 0.00 46.71 5.36
2884 3611 9.875691 GCCATCCTTTTTAATTCCATATTATCC 57.124 33.333 0.00 0.00 0.00 2.59
2887 3614 8.367156 GCTGCCATCCTTTTTAATTCCATATTA 58.633 33.333 0.00 0.00 0.00 0.98
2888 3615 7.147514 TGCTGCCATCCTTTTTAATTCCATATT 60.148 33.333 0.00 0.00 0.00 1.28
2889 3616 6.327104 TGCTGCCATCCTTTTTAATTCCATAT 59.673 34.615 0.00 0.00 0.00 1.78
2890 3617 5.660417 TGCTGCCATCCTTTTTAATTCCATA 59.340 36.000 0.00 0.00 0.00 2.74
2891 3618 4.470664 TGCTGCCATCCTTTTTAATTCCAT 59.529 37.500 0.00 0.00 0.00 3.41
2892 3619 3.837146 TGCTGCCATCCTTTTTAATTCCA 59.163 39.130 0.00 0.00 0.00 3.53
2893 3620 4.470334 TGCTGCCATCCTTTTTAATTCC 57.530 40.909 0.00 0.00 0.00 3.01
2894 3621 5.482006 AGTTGCTGCCATCCTTTTTAATTC 58.518 37.500 0.00 0.00 0.00 2.17
2895 3622 5.488262 AGTTGCTGCCATCCTTTTTAATT 57.512 34.783 0.00 0.00 0.00 1.40
2896 3623 6.437162 TCTTAGTTGCTGCCATCCTTTTTAAT 59.563 34.615 0.00 0.00 0.00 1.40
2897 3624 5.772672 TCTTAGTTGCTGCCATCCTTTTTAA 59.227 36.000 0.00 0.00 0.00 1.52
2898 3625 5.321102 TCTTAGTTGCTGCCATCCTTTTTA 58.679 37.500 0.00 0.00 0.00 1.52
2899 3626 4.151883 TCTTAGTTGCTGCCATCCTTTTT 58.848 39.130 0.00 0.00 0.00 1.94
2900 3627 3.760684 CTCTTAGTTGCTGCCATCCTTTT 59.239 43.478 0.00 0.00 0.00 2.27
2901 3628 3.350833 CTCTTAGTTGCTGCCATCCTTT 58.649 45.455 0.00 0.00 0.00 3.11
2902 3629 2.356535 CCTCTTAGTTGCTGCCATCCTT 60.357 50.000 0.00 0.00 0.00 3.36
2903 3630 1.211457 CCTCTTAGTTGCTGCCATCCT 59.789 52.381 0.00 0.00 0.00 3.24
2904 3631 1.210478 TCCTCTTAGTTGCTGCCATCC 59.790 52.381 0.00 0.00 0.00 3.51
2905 3632 2.680339 GTTCCTCTTAGTTGCTGCCATC 59.320 50.000 0.00 0.00 0.00 3.51
2906 3633 2.619074 GGTTCCTCTTAGTTGCTGCCAT 60.619 50.000 0.00 0.00 0.00 4.40
2907 3634 1.271379 GGTTCCTCTTAGTTGCTGCCA 60.271 52.381 0.00 0.00 0.00 4.92
2908 3635 1.003696 AGGTTCCTCTTAGTTGCTGCC 59.996 52.381 0.00 0.00 0.00 4.85
2909 3636 2.481289 AGGTTCCTCTTAGTTGCTGC 57.519 50.000 0.00 0.00 0.00 5.25
2910 3637 4.214332 GTGAAAGGTTCCTCTTAGTTGCTG 59.786 45.833 0.00 0.00 0.00 4.41
2911 3638 4.141482 TGTGAAAGGTTCCTCTTAGTTGCT 60.141 41.667 0.00 0.00 0.00 3.91
2912 3639 4.023963 GTGTGAAAGGTTCCTCTTAGTTGC 60.024 45.833 0.00 0.00 0.00 4.17
2913 3640 5.123227 TGTGTGAAAGGTTCCTCTTAGTTG 58.877 41.667 0.00 0.00 0.00 3.16
2914 3641 5.130477 TCTGTGTGAAAGGTTCCTCTTAGTT 59.870 40.000 0.00 0.00 0.00 2.24
2917 3644 5.623956 TTCTGTGTGAAAGGTTCCTCTTA 57.376 39.130 0.00 0.00 0.00 2.10
2922 3649 4.821805 TCAGAATTCTGTGTGAAAGGTTCC 59.178 41.667 29.80 0.00 44.12 3.62
2969 3696 4.539870 CTGAATTTGGTGTAGCTGTGTTG 58.460 43.478 0.00 0.00 0.00 3.33
2977 3704 2.513753 TGGTGGCTGAATTTGGTGTAG 58.486 47.619 0.00 0.00 0.00 2.74
2988 3715 1.699083 TCTGTTGAGAATGGTGGCTGA 59.301 47.619 0.00 0.00 0.00 4.26
2994 3721 5.248640 CCTGTTGTATCTGTTGAGAATGGT 58.751 41.667 0.00 0.00 0.00 3.55
2995 3722 4.095483 GCCTGTTGTATCTGTTGAGAATGG 59.905 45.833 0.00 0.00 0.00 3.16
3049 3776 6.094048 CGGATTTCATCTGGTATTCACAAGTT 59.906 38.462 0.00 0.00 31.92 2.66
3050 3777 5.586243 CGGATTTCATCTGGTATTCACAAGT 59.414 40.000 0.00 0.00 31.92 3.16
3072 3799 2.029124 GCTTGTTTGTGCTTTTGTTCGG 59.971 45.455 0.00 0.00 0.00 4.30
3079 3806 1.643880 GTGCTGCTTGTTTGTGCTTT 58.356 45.000 0.00 0.00 0.00 3.51
3082 3809 1.945662 CGGTGCTGCTTGTTTGTGC 60.946 57.895 0.00 0.00 0.00 4.57
3087 3814 2.281761 CCCTCGGTGCTGCTTGTT 60.282 61.111 0.00 0.00 0.00 2.83
3197 3926 2.293122 TGCAACTGATTTCTTGGGTTCG 59.707 45.455 0.00 0.00 0.00 3.95
3317 4046 3.175133 GGGAACCGATGTGAGCATT 57.825 52.632 0.00 0.00 40.86 3.56
3342 4071 7.708322 GCTTCAATTTTCTCTTCTTTCTTTGGT 59.292 33.333 0.00 0.00 0.00 3.67
3355 4084 8.970691 TGCATAGTTTAAGCTTCAATTTTCTC 57.029 30.769 0.00 0.00 0.00 2.87
3366 4095 5.450965 GCCATGTGATTGCATAGTTTAAGCT 60.451 40.000 0.00 0.00 0.00 3.74
3368 4097 6.140303 AGCCATGTGATTGCATAGTTTAAG 57.860 37.500 0.00 0.00 0.00 1.85
3371 4100 4.142093 GGAAGCCATGTGATTGCATAGTTT 60.142 41.667 0.00 0.00 0.00 2.66
3373 4102 2.954318 GGAAGCCATGTGATTGCATAGT 59.046 45.455 0.00 0.00 0.00 2.12
3376 4105 1.855295 TGGAAGCCATGTGATTGCAT 58.145 45.000 3.07 0.00 0.00 3.96
3403 4544 2.044946 ATTCTTCCCTGTGCGGCC 60.045 61.111 0.00 0.00 0.00 6.13
3409 4550 1.078143 GGCTGCGATTCTTCCCTGT 60.078 57.895 0.00 0.00 0.00 4.00
3428 4569 1.019278 TTCGACGAATTGCCTGCCTC 61.019 55.000 6.10 0.00 0.00 4.70
3447 4588 2.502577 GTTGCGCCCGGTAGGTAT 59.497 61.111 4.18 0.00 38.26 2.73
3448 4589 3.773404 GGTTGCGCCCGGTAGGTA 61.773 66.667 4.18 0.00 38.26 3.08
3480 4621 2.486796 GCCTTTCTGGTGAGCCATC 58.513 57.895 0.00 0.00 45.05 3.51
3504 4645 3.376935 ATTCTCGCACCTCCTGCCG 62.377 63.158 0.00 0.00 43.84 5.69
3534 4677 1.296392 CTGATCTCACCGCCACCAA 59.704 57.895 0.00 0.00 0.00 3.67
3553 4701 1.079127 CCTTCCACTGGTACGGCAG 60.079 63.158 0.00 0.00 39.14 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.