Multiple sequence alignment - TraesCS2D01G035400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G035400 chr2D 100.000 7585 0 0 1 7585 13525455 13533039 0.000000e+00 14007.0
1 TraesCS2D01G035400 chr2A 92.600 4000 190 48 309 4283 15606879 15610797 0.000000e+00 5650.0
2 TraesCS2D01G035400 chr2A 95.238 609 19 5 4684 5287 15611664 15612267 0.000000e+00 955.0
3 TraesCS2D01G035400 chr2A 93.429 350 18 3 4305 4654 15611322 15611666 1.460000e-141 514.0
4 TraesCS2D01G035400 chr2A 78.799 849 93 43 6109 6927 15612263 15613054 2.460000e-134 490.0
5 TraesCS2D01G035400 chr2A 91.221 262 20 2 7230 7490 15613356 15613615 3.370000e-93 353.0
6 TraesCS2D01G035400 chr2B 87.956 3097 196 55 1262 4283 24238798 24241792 0.000000e+00 3489.0
7 TraesCS2D01G035400 chr2B 82.792 1046 97 44 27 1033 24237557 24238558 0.000000e+00 857.0
8 TraesCS2D01G035400 chr2B 91.914 606 45 4 4684 5287 24242464 24243067 0.000000e+00 845.0
9 TraesCS2D01G035400 chr2B 93.277 357 20 2 4298 4654 24242114 24242466 2.420000e-144 523.0
10 TraesCS2D01G035400 chr2B 91.860 258 14 4 6462 6713 24243372 24243628 3.370000e-93 353.0
11 TraesCS2D01G035400 chr2B 83.807 352 36 14 7245 7585 24688299 24687958 1.590000e-81 315.0
12 TraesCS2D01G035400 chr2B 82.635 334 21 12 7261 7585 24691049 24690744 2.100000e-65 261.0
13 TraesCS2D01G035400 chr2B 81.034 232 22 15 6640 6869 24691752 24691541 1.690000e-36 165.0
14 TraesCS2D01G035400 chr2B 84.286 70 11 0 4197 4266 514855335 514855266 1.370000e-07 69.4
15 TraesCS2D01G035400 chr3D 98.739 793 10 0 5316 6108 29868384 29869176 0.000000e+00 1410.0
16 TraesCS2D01G035400 chr3D 84.971 692 58 20 3228 3907 53615735 53615078 0.000000e+00 660.0
17 TraesCS2D01G035400 chr7B 88.101 832 74 12 1166 1985 611521363 611522181 0.000000e+00 965.0
18 TraesCS2D01G035400 chr7B 78.400 125 18 6 196 318 653985718 653985601 1.060000e-08 73.1
19 TraesCS2D01G035400 chr5B 91.099 573 32 8 5537 6104 593558583 593558025 0.000000e+00 758.0
20 TraesCS2D01G035400 chr5B 78.583 1242 196 53 1384 2586 308227190 308228400 0.000000e+00 756.0
21 TraesCS2D01G035400 chr5B 90.559 572 35 8 5537 6103 593474585 593474028 0.000000e+00 739.0
22 TraesCS2D01G035400 chr5B 97.487 199 5 0 5286 5484 593558804 593558606 2.620000e-89 340.0
23 TraesCS2D01G035400 chr5B 96.985 199 6 0 5286 5484 593474806 593474608 1.220000e-87 335.0
24 TraesCS2D01G035400 chr5B 79.655 290 52 5 2298 2583 400533748 400533462 1.290000e-47 202.0
25 TraesCS2D01G035400 chr5A 78.537 1230 198 52 1384 2587 361870040 361871229 0.000000e+00 749.0
26 TraesCS2D01G035400 chr5A 87.923 414 35 9 5394 5799 485198148 485197742 2.480000e-129 473.0
27 TraesCS2D01G035400 chr5A 91.011 178 16 0 5936 6113 485197699 485197522 2.730000e-59 241.0
28 TraesCS2D01G035400 chr5A 87.931 58 5 2 4185 4241 543928377 543928433 4.910000e-07 67.6
29 TraesCS2D01G035400 chr3B 86.715 685 49 22 3228 3907 84437818 84437171 0.000000e+00 723.0
30 TraesCS2D01G035400 chr3A 85.116 692 57 18 3228 3907 64994644 64993987 0.000000e+00 665.0
31 TraesCS2D01G035400 chr3A 86.626 486 46 11 5307 5784 642030876 642030402 3.140000e-143 520.0
32 TraesCS2D01G035400 chr3A 91.011 178 16 0 5936 6113 642028252 642028075 2.730000e-59 241.0
33 TraesCS2D01G035400 chr3A 93.496 123 3 3 5288 5406 642028054 642028175 2.170000e-40 178.0
34 TraesCS2D01G035400 chr7A 86.891 534 38 17 5286 5799 120059470 120059991 3.070000e-158 569.0
35 TraesCS2D01G035400 chr7A 85.714 532 47 15 5286 5799 120011281 120011801 1.120000e-147 534.0
36 TraesCS2D01G035400 chr7A 85.865 474 41 14 5341 5799 120089756 120090218 1.480000e-131 481.0
37 TraesCS2D01G035400 chr7A 93.396 106 4 3 5303 5406 120060400 120060296 3.670000e-33 154.0
38 TraesCS2D01G035400 chr7A 91.489 94 8 0 6013 6106 120060296 120060389 6.180000e-26 130.0
39 TraesCS2D01G035400 chr7A 93.750 80 4 1 5936 6014 120011844 120011923 1.340000e-22 119.0
40 TraesCS2D01G035400 chr7A 94.667 75 4 0 5937 6011 120090262 120090336 4.810000e-22 117.0
41 TraesCS2D01G035400 chr7A 93.421 76 5 0 5936 6011 120060034 120060109 6.220000e-21 113.0
42 TraesCS2D01G035400 chr7A 86.170 94 12 1 6013 6106 120059594 120059502 4.840000e-17 100.0
43 TraesCS2D01G035400 chr5D 81.023 743 101 30 1384 2111 272136654 272137371 8.600000e-154 555.0
44 TraesCS2D01G035400 chr5D 82.493 337 52 6 2255 2588 272137520 272137852 9.630000e-74 289.0
45 TraesCS2D01G035400 chr5D 81.013 237 41 2 2298 2533 125437794 125438027 1.300000e-42 185.0
46 TraesCS2D01G035400 chr5D 89.655 58 4 2 4185 4241 428386327 428386383 1.060000e-08 73.1
47 TraesCS2D01G035400 chr7D 95.327 214 10 0 5895 6108 628445831 628445618 2.620000e-89 340.0
48 TraesCS2D01G035400 chr4B 91.579 95 8 0 400 494 483949479 483949573 1.720000e-26 132.0
49 TraesCS2D01G035400 chr4B 88.235 68 7 1 4193 4259 100314586 100314653 6.310000e-11 80.5
50 TraesCS2D01G035400 chr1A 81.679 131 11 9 308 428 474429094 474428967 6.260000e-16 97.1
51 TraesCS2D01G035400 chr4D 89.706 68 6 1 4193 4259 67791800 67791867 1.360000e-12 86.1
52 TraesCS2D01G035400 chr4D 100.000 30 0 0 7091 7120 425982650 425982621 1.000000e-03 56.5
53 TraesCS2D01G035400 chr6B 84.286 70 11 0 4189 4258 222680063 222680132 1.370000e-07 69.4
54 TraesCS2D01G035400 chr1B 91.837 49 3 1 380 428 488473436 488473483 4.910000e-07 67.6
55 TraesCS2D01G035400 chr6D 82.051 78 13 1 4189 4265 124941260 124941337 1.770000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G035400 chr2D 13525455 13533039 7584 False 14007.000000 14007 100.000000 1 7585 1 chr2D.!!$F1 7584
1 TraesCS2D01G035400 chr2A 15606879 15613615 6736 False 1592.400000 5650 90.257400 309 7490 5 chr2A.!!$F1 7181
2 TraesCS2D01G035400 chr2B 24237557 24243628 6071 False 1213.400000 3489 89.559800 27 6713 5 chr2B.!!$F1 6686
3 TraesCS2D01G035400 chr2B 24687958 24691752 3794 True 247.000000 315 82.492000 6640 7585 3 chr2B.!!$R2 945
4 TraesCS2D01G035400 chr3D 29868384 29869176 792 False 1410.000000 1410 98.739000 5316 6108 1 chr3D.!!$F1 792
5 TraesCS2D01G035400 chr3D 53615078 53615735 657 True 660.000000 660 84.971000 3228 3907 1 chr3D.!!$R1 679
6 TraesCS2D01G035400 chr7B 611521363 611522181 818 False 965.000000 965 88.101000 1166 1985 1 chr7B.!!$F1 819
7 TraesCS2D01G035400 chr5B 308227190 308228400 1210 False 756.000000 756 78.583000 1384 2586 1 chr5B.!!$F1 1202
8 TraesCS2D01G035400 chr5B 593558025 593558804 779 True 549.000000 758 94.293000 5286 6104 2 chr5B.!!$R3 818
9 TraesCS2D01G035400 chr5B 593474028 593474806 778 True 537.000000 739 93.772000 5286 6103 2 chr5B.!!$R2 817
10 TraesCS2D01G035400 chr5A 361870040 361871229 1189 False 749.000000 749 78.537000 1384 2587 1 chr5A.!!$F1 1203
11 TraesCS2D01G035400 chr5A 485197522 485198148 626 True 357.000000 473 89.467000 5394 6113 2 chr5A.!!$R1 719
12 TraesCS2D01G035400 chr3B 84437171 84437818 647 True 723.000000 723 86.715000 3228 3907 1 chr3B.!!$R1 679
13 TraesCS2D01G035400 chr3A 64993987 64994644 657 True 665.000000 665 85.116000 3228 3907 1 chr3A.!!$R1 679
14 TraesCS2D01G035400 chr3A 642028075 642030876 2801 True 380.500000 520 88.818500 5307 6113 2 chr3A.!!$R2 806
15 TraesCS2D01G035400 chr7A 120011281 120011923 642 False 326.500000 534 89.732000 5286 6014 2 chr7A.!!$F1 728
16 TraesCS2D01G035400 chr7A 120089756 120090336 580 False 299.000000 481 90.266000 5341 6011 2 chr7A.!!$F3 670
17 TraesCS2D01G035400 chr7A 120059470 120060389 919 False 270.666667 569 90.600333 5286 6106 3 chr7A.!!$F2 820
18 TraesCS2D01G035400 chr5D 272136654 272137852 1198 False 422.000000 555 81.758000 1384 2588 2 chr5D.!!$F3 1204

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
202 204 0.178990 AACAACTGGCTTCCACCTCC 60.179 55.000 0.00 0.00 0.00 4.30 F
984 1032 1.134694 GACCGATTTTGCAGGTCGC 59.865 57.895 6.34 0.00 43.96 5.19 F
1704 1823 0.681243 CTAACTTGGGGCAAGCTCCC 60.681 60.000 8.78 9.83 44.43 4.30 F
2292 2492 1.745087 CTTGTATGTCTTGCCGGCAAT 59.255 47.619 40.03 27.84 35.20 3.56 F
3273 3482 0.911769 TTGCATGGGAGATCGTTCCT 59.088 50.000 0.00 0.00 37.40 3.36 F
3380 3589 1.214175 TCCTGTTGGCAGAGGAAAACA 59.786 47.619 13.42 0.77 45.28 2.83 F
3863 4089 1.298859 CTGTTACTGCTGGGAACGCC 61.299 60.000 0.00 0.00 0.00 5.68 F
4609 5345 2.045885 AGGATCTAGGTCCTGGGTGAAA 59.954 50.000 24.37 0.00 46.76 2.69 F
5517 6275 0.241481 ACAGAGAAGTCGCTCGTTCC 59.759 55.000 0.00 0.00 39.87 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1239 1305 0.038251 TCTCACATCACGCCACACTC 60.038 55.000 0.00 0.00 0.00 3.51 R
2172 2357 1.001378 GCCGACTGCTTTGTTCATGTT 60.001 47.619 0.00 0.00 36.87 2.71 R
3273 3482 2.297033 GGCAAAGAGGCAGAAAATGACA 59.703 45.455 0.00 0.00 40.68 3.58 R
4180 4408 0.327191 TGGAAGGGAGGGGGTACATC 60.327 60.000 0.00 0.00 0.00 3.06 R
4820 5556 0.036765 ATCGTACCGCAAAGGCTTCA 60.037 50.000 0.00 0.00 46.52 3.02 R
5103 5841 0.740868 GCTGTCAGCACCGCATCTAA 60.741 55.000 20.16 0.00 41.89 2.10 R
5157 5895 2.388310 GTCCTAAAGACACAGCTCCC 57.612 55.000 0.00 0.00 45.55 4.30 R
6417 9520 0.317770 CTTTGGCGATGCGTTGTTGT 60.318 50.000 0.00 0.00 0.00 3.32 R
7413 10807 0.108186 TCATTCTGGCACGCCTACTG 60.108 55.000 9.92 2.74 36.94 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.214467 ACATCAATTGTAGTAGTTTTGGTGG 57.786 36.000 5.13 0.00 36.57 4.61
25 26 6.208599 ACATCAATTGTAGTAGTTTTGGTGGG 59.791 38.462 5.13 0.00 36.57 4.61
26 27 5.697067 TCAATTGTAGTAGTTTTGGTGGGT 58.303 37.500 5.13 0.00 0.00 4.51
27 28 6.130569 TCAATTGTAGTAGTTTTGGTGGGTT 58.869 36.000 5.13 0.00 0.00 4.11
28 29 6.608002 TCAATTGTAGTAGTTTTGGTGGGTTT 59.392 34.615 5.13 0.00 0.00 3.27
29 30 7.124448 TCAATTGTAGTAGTTTTGGTGGGTTTT 59.876 33.333 5.13 0.00 0.00 2.43
30 31 6.854091 TTGTAGTAGTTTTGGTGGGTTTTT 57.146 33.333 0.00 0.00 0.00 1.94
49 50 2.625973 TTTGTGCGGCTGGTTGCAAG 62.626 55.000 0.00 0.00 43.75 4.01
50 51 3.595758 GTGCGGCTGGTTGCAAGT 61.596 61.111 0.00 0.00 43.75 3.16
51 52 3.286751 TGCGGCTGGTTGCAAGTC 61.287 61.111 0.00 0.00 45.15 3.01
52 53 4.389576 GCGGCTGGTTGCAAGTCG 62.390 66.667 6.52 6.52 45.35 4.18
53 54 2.972505 CGGCTGGTTGCAAGTCGT 60.973 61.111 0.00 0.00 45.15 4.34
56 57 1.571460 GCTGGTTGCAAGTCGTCTG 59.429 57.895 0.00 0.00 42.31 3.51
63 64 3.105937 GTTGCAAGTCGTCTGGAAAAAC 58.894 45.455 0.00 0.00 0.00 2.43
64 65 2.360844 TGCAAGTCGTCTGGAAAAACA 58.639 42.857 0.00 0.00 0.00 2.83
65 66 2.750166 TGCAAGTCGTCTGGAAAAACAA 59.250 40.909 0.00 0.00 0.00 2.83
66 67 3.380004 TGCAAGTCGTCTGGAAAAACAAT 59.620 39.130 0.00 0.00 0.00 2.71
67 68 3.975035 GCAAGTCGTCTGGAAAAACAATC 59.025 43.478 0.00 0.00 0.00 2.67
68 69 4.497340 GCAAGTCGTCTGGAAAAACAATCA 60.497 41.667 0.00 0.00 0.00 2.57
69 70 5.762045 CAAGTCGTCTGGAAAAACAATCAT 58.238 37.500 0.00 0.00 0.00 2.45
75 76 4.524328 GTCTGGAAAAACAATCATCTGGGT 59.476 41.667 0.00 0.00 0.00 4.51
81 82 2.680312 ACAATCATCTGGGTCAGTCG 57.320 50.000 0.00 0.00 32.61 4.18
89 90 3.314307 TCTGGGTCAGTCGATTCCTAT 57.686 47.619 0.00 0.00 32.61 2.57
90 91 3.643237 TCTGGGTCAGTCGATTCCTATT 58.357 45.455 0.00 0.00 32.61 1.73
96 97 4.021016 GGTCAGTCGATTCCTATTAGCCAT 60.021 45.833 0.00 0.00 0.00 4.40
98 99 4.082733 TCAGTCGATTCCTATTAGCCATCG 60.083 45.833 12.94 12.94 38.46 3.84
99 100 3.193691 AGTCGATTCCTATTAGCCATCGG 59.806 47.826 16.54 0.00 37.83 4.18
108 109 6.228258 TCCTATTAGCCATCGGATACAAAAC 58.772 40.000 0.00 0.00 0.00 2.43
114 116 2.607635 CCATCGGATACAAAACAGACGG 59.392 50.000 0.00 0.00 0.00 4.79
134 136 1.064654 GCCGAGATTGCATCTTCAACC 59.935 52.381 0.00 0.00 40.38 3.77
142 144 1.372087 GCATCTTCAACCTCCCGCTG 61.372 60.000 0.00 0.00 0.00 5.18
151 153 1.045911 ACCTCCCGCTGATCTTCCTC 61.046 60.000 0.00 0.00 0.00 3.71
152 154 1.745264 CTCCCGCTGATCTTCCTCC 59.255 63.158 0.00 0.00 0.00 4.30
153 155 0.758685 CTCCCGCTGATCTTCCTCCT 60.759 60.000 0.00 0.00 0.00 3.69
159 161 2.288334 CGCTGATCTTCCTCCTGATCTG 60.288 54.545 0.00 0.00 39.63 2.90
165 167 1.484240 CTTCCTCCTGATCTGACCACC 59.516 57.143 0.38 0.00 0.00 4.61
169 171 1.142748 CCTGATCTGACCACCTCGC 59.857 63.158 0.38 0.00 0.00 5.03
184 186 4.728102 CGCGTACCACCGGCTGAA 62.728 66.667 0.00 0.00 0.00 3.02
185 187 3.116531 GCGTACCACCGGCTGAAC 61.117 66.667 0.00 0.00 0.00 3.18
186 188 2.340809 CGTACCACCGGCTGAACA 59.659 61.111 0.00 0.00 0.00 3.18
187 189 1.301087 CGTACCACCGGCTGAACAA 60.301 57.895 0.00 0.00 0.00 2.83
188 190 1.562575 CGTACCACCGGCTGAACAAC 61.563 60.000 0.00 0.00 0.00 3.32
189 191 0.250166 GTACCACCGGCTGAACAACT 60.250 55.000 0.00 0.00 0.00 3.16
190 192 0.250124 TACCACCGGCTGAACAACTG 60.250 55.000 0.00 0.00 0.00 3.16
191 193 2.260869 CCACCGGCTGAACAACTGG 61.261 63.158 0.00 0.00 38.37 4.00
192 194 2.594592 ACCGGCTGAACAACTGGC 60.595 61.111 0.00 0.00 35.58 4.85
193 195 2.281761 CCGGCTGAACAACTGGCT 60.282 61.111 0.00 0.00 39.95 4.75
202 204 0.178990 AACAACTGGCTTCCACCTCC 60.179 55.000 0.00 0.00 0.00 4.30
205 207 4.785453 CTGGCTTCCACCTCCCGC 62.785 72.222 0.00 0.00 0.00 6.13
306 321 2.525381 CCGGCCATCCCTCTAGCT 60.525 66.667 2.24 0.00 0.00 3.32
333 348 1.743623 CTTGCACCATCCGCCGTTA 60.744 57.895 0.00 0.00 0.00 3.18
382 401 1.645402 CCCACCCCCACCCTAAGATG 61.645 65.000 0.00 0.00 0.00 2.90
476 502 2.240493 AACCGAAGTCAGTCAACTGG 57.760 50.000 10.13 0.00 43.91 4.00
668 704 2.433838 CAGACCAGGCACGAGCAG 60.434 66.667 7.26 0.00 44.61 4.24
773 809 4.643387 GACAACCCCAGGCACGCT 62.643 66.667 0.00 0.00 0.00 5.07
793 829 1.150536 CCTCCCTCCCTCTCTCTCG 59.849 68.421 0.00 0.00 0.00 4.04
826 862 1.735376 CTTGGCCTGATGCAGATGGC 61.735 60.000 15.58 15.58 43.89 4.40
969 1017 2.570442 TTGTTTTTGTTCGCCTGACC 57.430 45.000 0.00 0.00 0.00 4.02
984 1032 1.134694 GACCGATTTTGCAGGTCGC 59.865 57.895 6.34 0.00 43.96 5.19
1033 1081 1.762460 ATCGGCCCCAGAGGTACTG 60.762 63.158 0.00 0.00 41.55 2.74
1051 1100 1.302511 GCCGCTTCCTTGTTCCTCA 60.303 57.895 0.00 0.00 0.00 3.86
1062 1111 3.849951 TTCCTCATCTCGCCCCGC 61.850 66.667 0.00 0.00 0.00 6.13
1083 1132 1.660560 CCGCCCCGTATAGTATCCCG 61.661 65.000 0.00 0.00 0.00 5.14
1228 1294 6.345723 GCACAAAGGTGTAAACAAATGATTCG 60.346 38.462 0.00 0.00 46.95 3.34
1232 1298 6.178239 AGGTGTAAACAAATGATTCGCTAC 57.822 37.500 0.00 0.00 0.00 3.58
1234 1300 6.021596 GGTGTAAACAAATGATTCGCTACTG 58.978 40.000 0.00 0.00 0.00 2.74
1235 1301 6.021596 GTGTAAACAAATGATTCGCTACTGG 58.978 40.000 0.00 0.00 0.00 4.00
1236 1302 5.703592 TGTAAACAAATGATTCGCTACTGGT 59.296 36.000 0.00 0.00 0.00 4.00
1237 1303 4.685169 AACAAATGATTCGCTACTGGTG 57.315 40.909 0.00 0.00 0.00 4.17
1238 1304 3.674997 ACAAATGATTCGCTACTGGTGT 58.325 40.909 0.00 0.00 0.00 4.16
1239 1305 3.436704 ACAAATGATTCGCTACTGGTGTG 59.563 43.478 0.00 0.00 0.00 3.82
1240 1306 3.610040 AATGATTCGCTACTGGTGTGA 57.390 42.857 0.00 0.00 0.00 3.58
1313 1411 7.559835 TGTGTGCACATATTTGTAAAAATCG 57.440 32.000 24.69 0.00 36.21 3.34
1536 1654 5.976534 CGAAGGTGAGATCAGTATCTTTCTG 59.023 44.000 0.00 0.00 42.73 3.02
1600 1719 4.208460 CCGACAGTAATAATAACACGCTGG 59.792 45.833 0.00 0.00 0.00 4.85
1603 1722 4.570772 ACAGTAATAATAACACGCTGGCTG 59.429 41.667 0.00 0.00 0.00 4.85
1704 1823 0.681243 CTAACTTGGGGCAAGCTCCC 60.681 60.000 8.78 9.83 44.43 4.30
1877 1999 9.447157 TTTTTGACCATGATCTTGTTTCTTTTT 57.553 25.926 7.73 0.00 0.00 1.94
2012 2140 5.989777 TGAAGCTAGGTCAGTAAAGTGTTTC 59.010 40.000 0.00 0.00 0.00 2.78
2160 2316 5.280945 TGTGTTTAGATTGCTCTGTTTTGC 58.719 37.500 0.00 0.00 32.66 3.68
2161 2317 5.067674 TGTGTTTAGATTGCTCTGTTTTGCT 59.932 36.000 0.00 0.00 32.66 3.91
2162 2318 5.979517 GTGTTTAGATTGCTCTGTTTTGCTT 59.020 36.000 0.00 0.00 32.66 3.91
2164 2320 6.476380 TGTTTAGATTGCTCTGTTTTGCTTTG 59.524 34.615 0.00 0.00 32.66 2.77
2172 2357 4.677779 GCTCTGTTTTGCTTTGTTCAAGGA 60.678 41.667 0.00 0.00 32.37 3.36
2190 2375 2.549754 AGGAACATGAACAAAGCAGTCG 59.450 45.455 0.00 0.00 0.00 4.18
2292 2492 1.745087 CTTGTATGTCTTGCCGGCAAT 59.255 47.619 40.03 27.84 35.20 3.56
2370 2570 3.592059 TGTTGACGGTATGCTTAAGGAC 58.408 45.455 4.29 0.00 0.00 3.85
2464 2664 4.202326 TGACAAGGGAAGACCAAGTAAGTC 60.202 45.833 0.00 0.00 43.89 3.01
2548 2749 3.299503 AGGGCATGTCTTTTGTCAGTTT 58.700 40.909 0.00 0.00 0.00 2.66
2939 3143 7.029563 GCCAAAATTACTGATACCTCACTTTG 58.970 38.462 0.00 0.00 0.00 2.77
3273 3482 0.911769 TTGCATGGGAGATCGTTCCT 59.088 50.000 0.00 0.00 37.40 3.36
3380 3589 1.214175 TCCTGTTGGCAGAGGAAAACA 59.786 47.619 13.42 0.77 45.28 2.83
3496 3713 6.238897 CCTGTGCAATTTTTGTTACCAGTAGA 60.239 38.462 0.00 0.00 0.00 2.59
3580 3802 6.204688 TGTTGTGTTTGTCTCCATTCTGTATC 59.795 38.462 0.00 0.00 0.00 2.24
3582 3804 7.239763 TGTGTTTGTCTCCATTCTGTATCTA 57.760 36.000 0.00 0.00 0.00 1.98
3583 3805 7.851228 TGTGTTTGTCTCCATTCTGTATCTAT 58.149 34.615 0.00 0.00 0.00 1.98
3584 3806 8.321353 TGTGTTTGTCTCCATTCTGTATCTATT 58.679 33.333 0.00 0.00 0.00 1.73
3585 3807 9.167311 GTGTTTGTCTCCATTCTGTATCTATTT 57.833 33.333 0.00 0.00 0.00 1.40
3586 3808 9.739276 TGTTTGTCTCCATTCTGTATCTATTTT 57.261 29.630 0.00 0.00 0.00 1.82
3740 3966 9.173021 TGACATTGGTTACCTGTATAATCTTTG 57.827 33.333 2.07 0.00 0.00 2.77
3779 4005 8.029642 ACTACTGTGTAATGTGAGCATTTTAC 57.970 34.615 0.00 0.48 42.19 2.01
3863 4089 1.298859 CTGTTACTGCTGGGAACGCC 61.299 60.000 0.00 0.00 0.00 5.68
3881 4107 4.467769 ACGCCTCTAGTATAAGGTGCTTA 58.532 43.478 8.33 0.00 45.22 3.09
3887 4115 7.815549 GCCTCTAGTATAAGGTGCTTATCTTTC 59.184 40.741 0.00 0.00 37.72 2.62
3921 4149 4.574599 AGCCTTGATGTGTTTTTCTGTC 57.425 40.909 0.00 0.00 0.00 3.51
3943 4171 8.746052 TGTCTTTGTTTTCTTGAATCCTAAGA 57.254 30.769 0.00 0.00 32.64 2.10
3992 4220 5.036117 TGACTAGTTTTCTTGCTGTCCTT 57.964 39.130 0.00 0.00 0.00 3.36
4035 4263 5.290643 TGTTTGTTGTTGCAAATTGCTAGTC 59.709 36.000 19.34 7.29 45.31 2.59
4036 4264 3.976169 TGTTGTTGCAAATTGCTAGTCC 58.024 40.909 19.34 5.22 45.31 3.85
4044 4272 6.588719 TGCAAATTGCTAGTCCTGTTTAAT 57.411 33.333 19.34 0.00 45.31 1.40
4045 4273 7.695480 TGCAAATTGCTAGTCCTGTTTAATA 57.305 32.000 19.34 0.00 45.31 0.98
4046 4274 7.535139 TGCAAATTGCTAGTCCTGTTTAATAC 58.465 34.615 19.34 0.00 45.31 1.89
4047 4275 7.393234 TGCAAATTGCTAGTCCTGTTTAATACT 59.607 33.333 19.34 0.00 45.31 2.12
4048 4276 7.910683 GCAAATTGCTAGTCCTGTTTAATACTC 59.089 37.037 11.19 0.00 40.96 2.59
4049 4277 8.398665 CAAATTGCTAGTCCTGTTTAATACTCC 58.601 37.037 0.00 0.00 0.00 3.85
4068 4296 5.300752 ACTCCTATTTATGTTCCATCTGCG 58.699 41.667 0.00 0.00 0.00 5.18
4174 4402 9.865321 ATGTCCATCTAAATTGAAAATGTTGAG 57.135 29.630 0.00 0.00 0.00 3.02
4212 4440 5.129320 CCCTCCCTTCCAAATTAATTGAAGG 59.871 44.000 26.27 26.27 41.85 3.46
4225 4453 7.631717 ATTAATTGAAGGTCTAGCTTTGTCC 57.368 36.000 0.00 0.00 0.00 4.02
4237 4465 6.706716 GTCTAGCTTTGTCCTAAGTCAAACTT 59.293 38.462 0.00 0.00 41.97 2.66
4240 4468 6.122964 AGCTTTGTCCTAAGTCAAACTTCTT 58.877 36.000 0.00 0.00 39.51 2.52
4321 5057 6.054295 GCCACAGATTCTCTTGTCATCTTAT 58.946 40.000 0.00 0.00 0.00 1.73
4322 5058 6.018098 GCCACAGATTCTCTTGTCATCTTATG 60.018 42.308 0.00 0.00 0.00 1.90
4337 5073 9.739276 TGTCATCTTATGTTTTACTGGATTTCT 57.261 29.630 0.00 0.00 0.00 2.52
4366 5102 4.558697 CGTCGACTGCCATTATCCAATCTA 60.559 45.833 14.70 0.00 0.00 1.98
4369 5105 5.773176 TCGACTGCCATTATCCAATCTACTA 59.227 40.000 0.00 0.00 0.00 1.82
4373 5109 5.162637 TGCCATTATCCAATCTACTACCCT 58.837 41.667 0.00 0.00 0.00 4.34
4378 5114 7.826252 CCATTATCCAATCTACTACCCTGAATG 59.174 40.741 0.00 0.00 0.00 2.67
4384 5120 8.063153 TCCAATCTACTACCCTGAATGTAACTA 58.937 37.037 0.00 0.00 0.00 2.24
4477 5213 2.811873 GCAGAAGGCTCAAGAACTTGGA 60.812 50.000 13.46 1.88 40.78 3.53
4609 5345 2.045885 AGGATCTAGGTCCTGGGTGAAA 59.954 50.000 24.37 0.00 46.76 2.69
4610 5346 3.049344 GGATCTAGGTCCTGGGTGAAAT 58.951 50.000 15.34 0.00 35.32 2.17
4611 5347 4.077982 AGGATCTAGGTCCTGGGTGAAATA 60.078 45.833 24.37 0.00 46.76 1.40
4612 5348 4.846940 GGATCTAGGTCCTGGGTGAAATAT 59.153 45.833 15.34 0.00 35.32 1.28
4613 5349 5.280215 GGATCTAGGTCCTGGGTGAAATATG 60.280 48.000 15.34 0.00 35.32 1.78
4614 5350 4.890988 TCTAGGTCCTGGGTGAAATATGA 58.109 43.478 0.00 0.00 0.00 2.15
4615 5351 5.285401 TCTAGGTCCTGGGTGAAATATGAA 58.715 41.667 0.00 0.00 0.00 2.57
4621 5357 5.474876 GTCCTGGGTGAAATATGAATCCATC 59.525 44.000 0.00 0.00 34.31 3.51
4659 5395 9.990360 TGAGTTCTGTGTAATTACAATAACTGA 57.010 29.630 28.47 22.79 37.16 3.41
4663 5399 8.263940 TCTGTGTAATTACAATAACTGAAGGC 57.736 34.615 19.63 4.00 38.04 4.35
4664 5400 8.100791 TCTGTGTAATTACAATAACTGAAGGCT 58.899 33.333 19.63 0.00 38.04 4.58
4665 5401 8.039603 TGTGTAATTACAATAACTGAAGGCTG 57.960 34.615 19.63 0.00 38.04 4.85
4666 5402 7.663905 TGTGTAATTACAATAACTGAAGGCTGT 59.336 33.333 19.63 0.00 38.04 4.40
4667 5403 8.512138 GTGTAATTACAATAACTGAAGGCTGTT 58.488 33.333 19.63 0.00 38.04 3.16
4668 5404 8.726988 TGTAATTACAATAACTGAAGGCTGTTC 58.273 33.333 15.92 0.00 34.41 3.18
4669 5405 8.947115 GTAATTACAATAACTGAAGGCTGTTCT 58.053 33.333 10.81 0.00 37.38 3.01
4670 5406 7.617041 ATTACAATAACTGAAGGCTGTTCTC 57.383 36.000 0.00 0.00 37.38 2.87
4671 5407 5.234466 ACAATAACTGAAGGCTGTTCTCT 57.766 39.130 0.00 0.00 37.38 3.10
4672 5408 6.360370 ACAATAACTGAAGGCTGTTCTCTA 57.640 37.500 0.00 0.00 37.38 2.43
4673 5409 6.951971 ACAATAACTGAAGGCTGTTCTCTAT 58.048 36.000 0.00 0.00 37.38 1.98
4674 5410 7.044798 ACAATAACTGAAGGCTGTTCTCTATC 58.955 38.462 0.00 0.00 37.38 2.08
4675 5411 6.798427 ATAACTGAAGGCTGTTCTCTATCA 57.202 37.500 0.00 0.00 37.38 2.15
4676 5412 5.489792 AACTGAAGGCTGTTCTCTATCAA 57.510 39.130 0.00 0.00 31.51 2.57
4677 5413 5.690464 ACTGAAGGCTGTTCTCTATCAAT 57.310 39.130 0.00 0.00 0.00 2.57
4678 5414 6.059787 ACTGAAGGCTGTTCTCTATCAATT 57.940 37.500 0.00 0.00 0.00 2.32
4679 5415 6.479884 ACTGAAGGCTGTTCTCTATCAATTT 58.520 36.000 0.00 0.00 0.00 1.82
4680 5416 7.624549 ACTGAAGGCTGTTCTCTATCAATTTA 58.375 34.615 0.00 0.00 0.00 1.40
4681 5417 8.270744 ACTGAAGGCTGTTCTCTATCAATTTAT 58.729 33.333 0.00 0.00 0.00 1.40
4682 5418 9.770097 CTGAAGGCTGTTCTCTATCAATTTATA 57.230 33.333 0.00 0.00 0.00 0.98
5081 5819 7.011482 GTCGATCTTTACTATTTGCTGTCCATT 59.989 37.037 0.00 0.00 0.00 3.16
5157 5895 6.096705 TGCAGGAAAAGATTAATGTACATGGG 59.903 38.462 9.63 0.00 0.00 4.00
5517 6275 0.241481 ACAGAGAAGTCGCTCGTTCC 59.759 55.000 0.00 0.00 39.87 3.62
5647 6406 3.436924 TAGAGTTCGGCGCGCTCA 61.437 61.111 32.29 15.17 0.00 4.26
5678 6441 3.047718 CTCGGTAGCAGCGGACGAA 62.048 63.158 9.13 0.00 39.89 3.85
6110 9180 0.396435 ATCCAAGGCACACGAACTGA 59.604 50.000 0.00 0.00 0.00 3.41
6113 9183 0.249868 CAAGGCACACGAACTGAGGA 60.250 55.000 0.00 0.00 0.00 3.71
6114 9184 0.249911 AAGGCACACGAACTGAGGAC 60.250 55.000 0.00 0.00 0.00 3.85
6115 9185 2.022129 GGCACACGAACTGAGGACG 61.022 63.158 0.00 0.00 0.00 4.79
6116 9186 2.022129 GCACACGAACTGAGGACGG 61.022 63.158 0.00 0.00 0.00 4.79
6117 9187 1.372997 CACACGAACTGAGGACGGG 60.373 63.158 0.00 1.76 36.48 5.28
6118 9188 1.831286 ACACGAACTGAGGACGGGT 60.831 57.895 2.97 2.97 38.84 5.28
6119 9189 0.538057 ACACGAACTGAGGACGGGTA 60.538 55.000 6.65 0.00 41.81 3.69
6120 9190 0.815734 CACGAACTGAGGACGGGTAT 59.184 55.000 0.00 0.00 0.00 2.73
6121 9191 2.019249 CACGAACTGAGGACGGGTATA 58.981 52.381 0.00 0.00 0.00 1.47
6122 9192 2.621998 CACGAACTGAGGACGGGTATAT 59.378 50.000 0.00 0.00 0.00 0.86
6123 9193 3.067742 CACGAACTGAGGACGGGTATATT 59.932 47.826 0.00 0.00 0.00 1.28
6124 9194 3.067742 ACGAACTGAGGACGGGTATATTG 59.932 47.826 0.00 0.00 0.00 1.90
6125 9195 3.391049 GAACTGAGGACGGGTATATTGC 58.609 50.000 0.00 0.00 0.00 3.56
6126 9196 2.679082 ACTGAGGACGGGTATATTGCT 58.321 47.619 0.00 0.00 0.00 3.91
6169 9239 6.183360 GCTGTTCCTCTAGTAAACATCGAAAC 60.183 42.308 0.00 0.00 32.85 2.78
6190 9260 8.027771 CGAAACCTAGTGATACTCAAAAGTAGT 58.972 37.037 0.00 0.00 41.22 2.73
6272 9349 9.640974 GCAAAATGTTTGCAAATATGATCATAC 57.359 29.630 20.41 5.85 44.34 2.39
6274 9351 8.891671 AAATGTTTGCAAATATGATCATACCC 57.108 30.769 20.41 7.09 0.00 3.69
6277 9354 7.490840 TGTTTGCAAATATGATCATACCCAAG 58.509 34.615 17.60 7.63 0.00 3.61
6293 9370 0.319211 CAAGTCTGTAACCCGTGCGA 60.319 55.000 0.00 0.00 0.00 5.10
6348 9425 6.189859 AGATTTTTGCCCACTCTGATATGAA 58.810 36.000 0.00 0.00 0.00 2.57
6350 9427 6.662865 TTTTTGCCCACTCTGATATGAAAA 57.337 33.333 0.00 0.00 0.00 2.29
6370 9468 6.939730 TGAAAAAGTTATATCCTGTGCTGTCA 59.060 34.615 0.00 0.00 0.00 3.58
6373 9471 4.033709 AGTTATATCCTGTGCTGTCACCT 58.966 43.478 0.00 0.00 42.46 4.00
6399 9502 8.137437 TGTTTCCTTTGACTTCATCAGATTTTC 58.863 33.333 0.00 0.00 38.99 2.29
6401 9504 7.678947 TCCTTTGACTTCATCAGATTTTCTC 57.321 36.000 0.00 0.00 38.99 2.87
6402 9505 7.226441 TCCTTTGACTTCATCAGATTTTCTCA 58.774 34.615 0.00 0.00 38.99 3.27
6403 9506 7.173907 TCCTTTGACTTCATCAGATTTTCTCAC 59.826 37.037 0.00 0.00 38.99 3.51
6404 9507 7.174599 CCTTTGACTTCATCAGATTTTCTCACT 59.825 37.037 0.00 0.00 38.99 3.41
6405 9508 8.455903 TTTGACTTCATCAGATTTTCTCACTT 57.544 30.769 0.00 0.00 38.99 3.16
6406 9509 7.430992 TGACTTCATCAGATTTTCTCACTTG 57.569 36.000 0.00 0.00 31.91 3.16
6407 9510 6.994496 TGACTTCATCAGATTTTCTCACTTGT 59.006 34.615 0.00 0.00 31.91 3.16
6408 9511 7.172190 TGACTTCATCAGATTTTCTCACTTGTC 59.828 37.037 0.00 0.00 31.91 3.18
6409 9512 6.994496 ACTTCATCAGATTTTCTCACTTGTCA 59.006 34.615 0.00 0.00 0.00 3.58
6410 9513 6.791887 TCATCAGATTTTCTCACTTGTCAC 57.208 37.500 0.00 0.00 0.00 3.67
6411 9514 5.702670 TCATCAGATTTTCTCACTTGTCACC 59.297 40.000 0.00 0.00 0.00 4.02
6412 9515 5.034852 TCAGATTTTCTCACTTGTCACCA 57.965 39.130 0.00 0.00 0.00 4.17
6413 9516 5.624159 TCAGATTTTCTCACTTGTCACCAT 58.376 37.500 0.00 0.00 0.00 3.55
6414 9517 6.064060 TCAGATTTTCTCACTTGTCACCATT 58.936 36.000 0.00 0.00 0.00 3.16
6415 9518 6.547141 TCAGATTTTCTCACTTGTCACCATTT 59.453 34.615 0.00 0.00 0.00 2.32
6417 9520 8.352201 CAGATTTTCTCACTTGTCACCATTTTA 58.648 33.333 0.00 0.00 0.00 1.52
6418 9521 8.352942 AGATTTTCTCACTTGTCACCATTTTAC 58.647 33.333 0.00 0.00 0.00 2.01
6419 9522 7.397892 TTTTCTCACTTGTCACCATTTTACA 57.602 32.000 0.00 0.00 0.00 2.41
6420 9523 7.397892 TTTCTCACTTGTCACCATTTTACAA 57.602 32.000 0.00 0.00 0.00 2.41
6421 9524 6.371809 TCTCACTTGTCACCATTTTACAAC 57.628 37.500 0.00 0.00 0.00 3.32
6422 9525 5.883115 TCTCACTTGTCACCATTTTACAACA 59.117 36.000 0.00 0.00 0.00 3.33
6423 9526 6.375736 TCTCACTTGTCACCATTTTACAACAA 59.624 34.615 0.00 0.00 0.00 2.83
6424 9527 6.326375 TCACTTGTCACCATTTTACAACAAC 58.674 36.000 0.00 0.00 0.00 3.32
6425 9528 5.229052 CACTTGTCACCATTTTACAACAACG 59.771 40.000 0.00 0.00 0.00 4.10
6426 9529 3.696898 TGTCACCATTTTACAACAACGC 58.303 40.909 0.00 0.00 0.00 4.84
6427 9530 3.128764 TGTCACCATTTTACAACAACGCA 59.871 39.130 0.00 0.00 0.00 5.24
6428 9531 4.202060 TGTCACCATTTTACAACAACGCAT 60.202 37.500 0.00 0.00 0.00 4.73
6429 9532 4.381566 GTCACCATTTTACAACAACGCATC 59.618 41.667 0.00 0.00 0.00 3.91
6430 9533 3.360463 CACCATTTTACAACAACGCATCG 59.640 43.478 0.00 0.00 0.00 3.84
6431 9534 2.341168 CCATTTTACAACAACGCATCGC 59.659 45.455 0.00 0.00 0.00 4.58
6432 9535 2.039327 TTTTACAACAACGCATCGCC 57.961 45.000 0.00 0.00 0.00 5.54
6433 9536 0.945099 TTTACAACAACGCATCGCCA 59.055 45.000 0.00 0.00 0.00 5.69
6434 9537 0.945099 TTACAACAACGCATCGCCAA 59.055 45.000 0.00 0.00 0.00 4.52
6435 9538 0.945099 TACAACAACGCATCGCCAAA 59.055 45.000 0.00 0.00 0.00 3.28
6436 9539 0.317770 ACAACAACGCATCGCCAAAG 60.318 50.000 0.00 0.00 0.00 2.77
6437 9540 1.371635 AACAACGCATCGCCAAAGC 60.372 52.632 0.00 0.00 0.00 3.51
6438 9541 2.069465 AACAACGCATCGCCAAAGCA 62.069 50.000 0.00 0.00 39.83 3.91
6439 9542 2.082366 CAACGCATCGCCAAAGCAC 61.082 57.895 0.00 0.00 39.83 4.40
6440 9543 2.551006 AACGCATCGCCAAAGCACA 61.551 52.632 0.00 0.00 39.83 4.57
6441 9544 1.865788 AACGCATCGCCAAAGCACAT 61.866 50.000 0.00 0.00 39.83 3.21
6442 9545 1.153978 CGCATCGCCAAAGCACATT 60.154 52.632 0.00 0.00 39.83 2.71
6443 9546 0.733566 CGCATCGCCAAAGCACATTT 60.734 50.000 0.00 0.00 39.83 2.32
6446 9549 2.159801 GCATCGCCAAAGCACATTTTTC 60.160 45.455 0.00 0.00 39.83 2.29
6454 9557 5.106987 GCCAAAGCACATTTTTCATAGTTGG 60.107 40.000 0.00 0.00 39.53 3.77
6456 9559 6.482973 CCAAAGCACATTTTTCATAGTTGGTT 59.517 34.615 0.00 0.00 0.00 3.67
6584 9692 0.239082 TTGTTCTCGAGCTCGCGTAA 59.761 50.000 30.97 20.12 39.60 3.18
6635 9744 4.696479 AGATAAGATAGTGCCTGGTTGG 57.304 45.455 0.00 0.00 39.35 3.77
6636 9745 3.392616 AGATAAGATAGTGCCTGGTTGGG 59.607 47.826 0.00 0.00 36.00 4.12
6637 9746 1.372501 AAGATAGTGCCTGGTTGGGT 58.627 50.000 0.00 0.00 36.00 4.51
6638 9747 1.372501 AGATAGTGCCTGGTTGGGTT 58.627 50.000 0.00 0.00 36.00 4.11
6713 9836 7.985634 ACTGTGTCAACATGTAAAATTGTTC 57.014 32.000 0.00 0.00 35.22 3.18
6716 9839 6.183360 TGTGTCAACATGTAAAATTGTTCCGA 60.183 34.615 0.00 0.00 33.93 4.55
6717 9840 6.861055 GTGTCAACATGTAAAATTGTTCCGAT 59.139 34.615 0.00 0.00 33.93 4.18
6719 9842 8.233868 TGTCAACATGTAAAATTGTTCCGATAG 58.766 33.333 0.00 0.00 33.93 2.08
6737 9867 4.804139 CGATAGGCGTCTGACAAGTAATTT 59.196 41.667 0.00 0.00 34.64 1.82
6778 9908 2.252976 TGCAATTTTGGGCCAGTTTC 57.747 45.000 6.23 0.00 0.00 2.78
6805 9935 6.818869 GGCGACCTTTGTACTATAGTTTAC 57.181 41.667 11.40 4.74 0.00 2.01
6806 9936 6.567959 GGCGACCTTTGTACTATAGTTTACT 58.432 40.000 11.40 0.00 0.00 2.24
6834 9966 5.957771 TTTCCTTGTAGCTATCTGGATGT 57.042 39.130 0.00 0.00 0.00 3.06
6884 10019 3.087031 AGCAATGCTTAGTTCATGCTGT 58.913 40.909 0.00 0.00 33.89 4.40
6888 10023 2.703416 TGCTTAGTTCATGCTGTGGAG 58.297 47.619 0.00 0.00 0.00 3.86
6894 10029 3.554934 AGTTCATGCTGTGGAGTTTCAA 58.445 40.909 0.00 0.00 0.00 2.69
6896 10036 4.217118 AGTTCATGCTGTGGAGTTTCAATC 59.783 41.667 0.00 0.00 0.00 2.67
6910 10050 6.128902 GGAGTTTCAATCACGTACTTGTGTAG 60.129 42.308 8.58 0.00 40.74 2.74
6919 10059 6.978338 TCACGTACTTGTGTAGATTTCTTCT 58.022 36.000 0.00 0.00 40.74 2.85
6920 10060 7.082602 TCACGTACTTGTGTAGATTTCTTCTC 58.917 38.462 0.00 0.00 40.74 2.87
6922 10062 6.015688 ACGTACTTGTGTAGATTTCTTCTCCA 60.016 38.462 0.00 0.00 35.79 3.86
6923 10063 6.528423 CGTACTTGTGTAGATTTCTTCTCCAG 59.472 42.308 0.00 0.00 35.79 3.86
6924 10064 6.426646 ACTTGTGTAGATTTCTTCTCCAGT 57.573 37.500 0.00 0.00 35.79 4.00
6926 10066 6.042093 ACTTGTGTAGATTTCTTCTCCAGTCA 59.958 38.462 0.00 0.00 35.79 3.41
6928 10068 5.047021 TGTGTAGATTTCTTCTCCAGTCAGG 60.047 44.000 0.00 0.00 35.79 3.86
6929 10069 3.625649 AGATTTCTTCTCCAGTCAGGC 57.374 47.619 0.00 0.00 37.29 4.85
6931 10071 3.197549 AGATTTCTTCTCCAGTCAGGCTC 59.802 47.826 0.00 0.00 37.29 4.70
6933 10073 1.554836 TCTTCTCCAGTCAGGCTCAG 58.445 55.000 0.00 0.00 37.29 3.35
6934 10074 1.203112 TCTTCTCCAGTCAGGCTCAGT 60.203 52.381 0.00 0.00 37.29 3.41
6935 10075 1.622811 CTTCTCCAGTCAGGCTCAGTT 59.377 52.381 0.00 0.00 37.29 3.16
6936 10076 1.261480 TCTCCAGTCAGGCTCAGTTC 58.739 55.000 0.00 0.00 37.29 3.01
6938 10078 0.681733 TCCAGTCAGGCTCAGTTCAC 59.318 55.000 0.00 0.00 37.29 3.18
6939 10079 0.668706 CCAGTCAGGCTCAGTTCACG 60.669 60.000 0.00 0.00 0.00 4.35
6940 10080 0.668706 CAGTCAGGCTCAGTTCACGG 60.669 60.000 0.00 0.00 0.00 4.94
6942 10082 0.601558 GTCAGGCTCAGTTCACGGTA 59.398 55.000 0.00 0.00 0.00 4.02
6943 10083 0.601558 TCAGGCTCAGTTCACGGTAC 59.398 55.000 0.00 0.00 0.00 3.34
6944 10084 0.317160 CAGGCTCAGTTCACGGTACA 59.683 55.000 0.00 0.00 0.00 2.90
6945 10085 1.045407 AGGCTCAGTTCACGGTACAA 58.955 50.000 0.00 0.00 0.00 2.41
6946 10086 1.145803 GGCTCAGTTCACGGTACAAC 58.854 55.000 0.00 0.00 0.00 3.32
6982 10150 9.804758 AAAAATAGTCACGAAACTAGAGATAGG 57.195 33.333 0.00 0.00 35.31 2.57
6983 10151 8.522542 AAATAGTCACGAAACTAGAGATAGGT 57.477 34.615 0.00 0.00 35.31 3.08
6984 10152 8.522542 AATAGTCACGAAACTAGAGATAGGTT 57.477 34.615 0.00 0.00 35.31 3.50
6985 10153 6.837471 AGTCACGAAACTAGAGATAGGTTT 57.163 37.500 0.00 0.00 36.12 3.27
6986 10154 7.229581 AGTCACGAAACTAGAGATAGGTTTT 57.770 36.000 0.00 0.00 34.00 2.43
6989 10157 9.235537 GTCACGAAACTAGAGATAGGTTTTATC 57.764 37.037 0.00 0.00 34.00 1.75
6990 10158 9.186837 TCACGAAACTAGAGATAGGTTTTATCT 57.813 33.333 0.00 0.00 37.02 1.98
6991 10159 9.804758 CACGAAACTAGAGATAGGTTTTATCTT 57.195 33.333 0.00 0.00 34.68 2.40
7013 10181 8.425577 TCTTCACTTCAAAAACTAGAGACAAG 57.574 34.615 0.00 0.00 0.00 3.16
7017 10185 5.823045 ACTTCAAAAACTAGAGACAAGTGGG 59.177 40.000 0.00 0.00 0.00 4.61
7019 10187 5.751586 TCAAAAACTAGAGACAAGTGGGTT 58.248 37.500 0.00 0.00 0.00 4.11
7023 10191 8.630037 CAAAAACTAGAGACAAGTGGGTTAAAT 58.370 33.333 0.00 0.00 0.00 1.40
7025 10193 8.762481 AAACTAGAGACAAGTGGGTTAAATTT 57.238 30.769 0.00 0.00 0.00 1.82
7026 10194 9.856162 AAACTAGAGACAAGTGGGTTAAATTTA 57.144 29.630 0.00 0.00 0.00 1.40
7039 10207 8.369424 GTGGGTTAAATTTACACCAAAATAGGT 58.631 33.333 17.29 0.00 44.48 3.08
7048 10216 9.990360 ATTTACACCAAAATAGGTAAAAACTGG 57.010 29.630 0.00 0.00 40.77 4.00
7049 10217 8.536340 TTACACCAAAATAGGTAAAAACTGGT 57.464 30.769 0.00 0.00 40.77 4.00
7051 10219 6.608002 ACACCAAAATAGGTAAAAACTGGTCA 59.392 34.615 0.00 0.00 40.77 4.02
7052 10220 7.145323 CACCAAAATAGGTAAAAACTGGTCAG 58.855 38.462 0.00 0.00 40.77 3.51
7053 10221 6.837048 ACCAAAATAGGTAAAAACTGGTCAGT 59.163 34.615 0.00 0.00 41.28 3.41
7054 10222 7.013942 ACCAAAATAGGTAAAAACTGGTCAGTC 59.986 37.037 3.93 0.00 39.60 3.51
7056 10224 7.745620 AAATAGGTAAAAACTGGTCAGTCTG 57.254 36.000 3.93 0.00 41.58 3.51
7059 10227 2.038387 AAAAACTGGTCAGTCTGCGT 57.962 45.000 3.93 0.00 41.58 5.24
7076 10247 1.191096 CGTTTGCTGAACTGTGTTGC 58.809 50.000 2.83 0.00 36.06 4.17
7078 10249 1.090728 TTTGCTGAACTGTGTTGCGA 58.909 45.000 0.00 0.00 0.00 5.10
7083 10254 3.616821 TGCTGAACTGTGTTGCGATATAC 59.383 43.478 0.00 0.00 0.00 1.47
7084 10255 3.865745 GCTGAACTGTGTTGCGATATACT 59.134 43.478 0.00 0.00 0.00 2.12
7086 10257 5.066968 TGAACTGTGTTGCGATATACTCA 57.933 39.130 0.00 0.00 0.00 3.41
7087 10258 5.660460 TGAACTGTGTTGCGATATACTCAT 58.340 37.500 0.00 0.00 0.00 2.90
7088 10259 6.801575 TGAACTGTGTTGCGATATACTCATA 58.198 36.000 0.00 0.00 0.00 2.15
7089 10260 6.695713 TGAACTGTGTTGCGATATACTCATAC 59.304 38.462 0.00 0.00 0.00 2.39
7090 10261 6.144078 ACTGTGTTGCGATATACTCATACA 57.856 37.500 0.00 0.00 0.00 2.29
7091 10262 5.977725 ACTGTGTTGCGATATACTCATACAC 59.022 40.000 0.00 0.00 0.00 2.90
7092 10263 6.144078 TGTGTTGCGATATACTCATACACT 57.856 37.500 0.00 0.00 0.00 3.55
7093 10264 6.206498 TGTGTTGCGATATACTCATACACTC 58.794 40.000 0.00 0.00 0.00 3.51
7094 10265 6.039382 TGTGTTGCGATATACTCATACACTCT 59.961 38.462 0.00 0.00 0.00 3.24
7095 10266 6.579292 GTGTTGCGATATACTCATACACTCTC 59.421 42.308 0.00 0.00 0.00 3.20
7096 10267 6.486993 TGTTGCGATATACTCATACACTCTCT 59.513 38.462 0.00 0.00 0.00 3.10
7097 10268 7.013369 TGTTGCGATATACTCATACACTCTCTT 59.987 37.037 0.00 0.00 0.00 2.85
7098 10269 7.511959 TGCGATATACTCATACACTCTCTTT 57.488 36.000 0.00 0.00 0.00 2.52
7099 10270 7.363431 TGCGATATACTCATACACTCTCTTTG 58.637 38.462 0.00 0.00 0.00 2.77
7100 10271 7.013369 TGCGATATACTCATACACTCTCTTTGT 59.987 37.037 0.00 0.00 0.00 2.83
7101 10272 8.504815 GCGATATACTCATACACTCTCTTTGTA 58.495 37.037 0.00 0.00 34.00 2.41
7137 10402 8.588290 AGATCGTTGGATAAGCTAGATTATCT 57.412 34.615 29.97 15.92 40.51 1.98
7138 10403 8.682710 AGATCGTTGGATAAGCTAGATTATCTC 58.317 37.037 29.97 22.66 40.51 2.75
7139 10404 8.588290 ATCGTTGGATAAGCTAGATTATCTCT 57.412 34.615 29.97 12.87 40.51 3.10
7140 10405 8.410673 TCGTTGGATAAGCTAGATTATCTCTT 57.589 34.615 29.97 10.29 40.51 2.85
7141 10406 8.861086 TCGTTGGATAAGCTAGATTATCTCTTT 58.139 33.333 29.97 5.05 40.51 2.52
7142 10407 9.482627 CGTTGGATAAGCTAGATTATCTCTTTT 57.517 33.333 29.97 4.39 40.51 2.27
7183 10448 2.341846 AATCCACCAGTGTTGAACGT 57.658 45.000 0.00 0.00 0.00 3.99
7187 10452 1.078072 ACCAGTGTTGAACGTGGCA 60.078 52.632 14.46 0.00 33.02 4.92
7188 10453 0.465460 ACCAGTGTTGAACGTGGCAT 60.465 50.000 14.46 0.00 33.02 4.40
7199 10464 0.034756 ACGTGGCATAGTGAAGTGCA 59.965 50.000 0.00 0.00 43.00 4.57
7216 10481 1.961277 CACCCGCAGTGTTCTGGAC 60.961 63.158 0.00 0.00 41.93 4.02
7223 10497 2.288213 CGCAGTGTTCTGGACAGAGTAA 60.288 50.000 1.92 0.00 39.39 2.24
7224 10498 3.728845 GCAGTGTTCTGGACAGAGTAAA 58.271 45.455 1.92 0.00 39.39 2.01
7226 10500 4.757149 GCAGTGTTCTGGACAGAGTAAATT 59.243 41.667 1.92 0.00 39.39 1.82
7228 10502 6.128526 GCAGTGTTCTGGACAGAGTAAATTAC 60.129 42.308 1.92 0.00 39.39 1.89
7229 10503 6.929049 CAGTGTTCTGGACAGAGTAAATTACA 59.071 38.462 5.89 0.00 39.39 2.41
7230 10504 7.604164 CAGTGTTCTGGACAGAGTAAATTACAT 59.396 37.037 5.89 0.00 39.39 2.29
7231 10505 8.157476 AGTGTTCTGGACAGAGTAAATTACATT 58.843 33.333 5.89 0.00 39.39 2.71
7236 10623 5.935206 TGGACAGAGTAAATTACATTTCGCA 59.065 36.000 5.89 0.00 33.82 5.10
7245 10632 0.613260 TACATTTCGCAGACCCAGCT 59.387 50.000 0.00 0.00 34.32 4.24
7246 10633 0.674895 ACATTTCGCAGACCCAGCTC 60.675 55.000 0.00 0.00 34.32 4.09
7257 10644 0.842030 ACCCAGCTCACCATTCCTCA 60.842 55.000 0.00 0.00 0.00 3.86
7259 10646 1.064166 CCCAGCTCACCATTCCTCAAT 60.064 52.381 0.00 0.00 0.00 2.57
7297 10684 2.111669 CTGCTCACAGCCCACACA 59.888 61.111 0.00 0.00 41.51 3.72
7339 10733 2.195567 CGCGAATGGGAATGGCCAT 61.196 57.895 14.09 14.09 38.95 4.40
7432 10826 0.108186 CAGTAGGCGTGCCAGAATGA 60.108 55.000 14.29 0.00 39.69 2.57
7443 10837 1.171308 CCAGAATGAAGGCACACCAG 58.829 55.000 0.00 0.00 39.69 4.00
7546 13701 0.535335 GATTGTGGCCACCGTCTAGA 59.465 55.000 32.62 9.77 0.00 2.43
7553 13708 1.538419 GGCCACCGTCTAGATAAGCAC 60.538 57.143 0.00 0.00 0.00 4.40
7561 13716 4.476862 CGTCTAGATAAGCACGCATATGT 58.523 43.478 4.29 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.208599 CCCACCAAAACTACTACAATTGATGT 59.791 38.462 13.59 12.22 46.36 3.06
1 2 6.208599 ACCCACCAAAACTACTACAATTGATG 59.791 38.462 13.59 6.67 0.00 3.07
2 3 6.311735 ACCCACCAAAACTACTACAATTGAT 58.688 36.000 13.59 0.00 0.00 2.57
4 5 6.399639 AACCCACCAAAACTACTACAATTG 57.600 37.500 3.24 3.24 0.00 2.32
5 6 7.426606 AAAACCCACCAAAACTACTACAATT 57.573 32.000 0.00 0.00 0.00 2.32
6 7 7.426606 AAAAACCCACCAAAACTACTACAAT 57.573 32.000 0.00 0.00 0.00 2.71
7 8 6.854091 AAAAACCCACCAAAACTACTACAA 57.146 33.333 0.00 0.00 0.00 2.41
28 29 1.520342 GCAACCAGCCGCACAAAAA 60.520 52.632 0.00 0.00 37.23 1.94
29 30 2.105930 GCAACCAGCCGCACAAAA 59.894 55.556 0.00 0.00 37.23 2.44
30 31 2.625973 CTTGCAACCAGCCGCACAAA 62.626 55.000 0.00 0.00 44.83 2.83
31 32 3.136345 CTTGCAACCAGCCGCACAA 62.136 57.895 0.00 0.00 44.83 3.33
32 33 3.594775 CTTGCAACCAGCCGCACA 61.595 61.111 0.00 0.00 44.83 4.57
33 34 3.542629 GACTTGCAACCAGCCGCAC 62.543 63.158 0.00 0.00 44.83 5.34
34 35 3.286751 GACTTGCAACCAGCCGCA 61.287 61.111 0.00 0.00 44.83 5.69
35 36 4.389576 CGACTTGCAACCAGCCGC 62.390 66.667 0.00 0.00 44.83 6.53
41 42 1.305201 TTTCCAGACGACTTGCAACC 58.695 50.000 0.00 0.00 0.00 3.77
49 50 5.385617 CAGATGATTGTTTTTCCAGACGAC 58.614 41.667 0.00 0.00 0.00 4.34
50 51 4.455533 CCAGATGATTGTTTTTCCAGACGA 59.544 41.667 0.00 0.00 0.00 4.20
51 52 4.379813 CCCAGATGATTGTTTTTCCAGACG 60.380 45.833 0.00 0.00 0.00 4.18
52 53 4.524328 ACCCAGATGATTGTTTTTCCAGAC 59.476 41.667 0.00 0.00 0.00 3.51
53 54 4.739793 ACCCAGATGATTGTTTTTCCAGA 58.260 39.130 0.00 0.00 0.00 3.86
56 57 4.524328 ACTGACCCAGATGATTGTTTTTCC 59.476 41.667 0.45 0.00 35.18 3.13
63 64 2.967599 TCGACTGACCCAGATGATTG 57.032 50.000 0.45 0.00 35.18 2.67
64 65 3.181461 GGAATCGACTGACCCAGATGATT 60.181 47.826 13.68 13.68 39.45 2.57
65 66 2.366916 GGAATCGACTGACCCAGATGAT 59.633 50.000 0.45 1.32 35.18 2.45
66 67 1.757118 GGAATCGACTGACCCAGATGA 59.243 52.381 0.45 0.00 35.18 2.92
67 68 1.759445 AGGAATCGACTGACCCAGATG 59.241 52.381 0.45 0.00 35.18 2.90
68 69 2.166907 AGGAATCGACTGACCCAGAT 57.833 50.000 0.45 0.00 35.18 2.90
69 70 2.820728 TAGGAATCGACTGACCCAGA 57.179 50.000 0.45 0.00 35.18 3.86
75 76 4.082733 CGATGGCTAATAGGAATCGACTGA 60.083 45.833 0.00 0.00 41.98 3.41
81 82 6.222038 TGTATCCGATGGCTAATAGGAATC 57.778 41.667 6.02 4.12 42.63 2.52
89 90 4.873827 GTCTGTTTTGTATCCGATGGCTAA 59.126 41.667 0.00 0.00 0.00 3.09
90 91 4.439057 GTCTGTTTTGTATCCGATGGCTA 58.561 43.478 0.00 0.00 0.00 3.93
96 97 1.673626 GGCCGTCTGTTTTGTATCCGA 60.674 52.381 0.00 0.00 0.00 4.55
98 99 0.725117 CGGCCGTCTGTTTTGTATCC 59.275 55.000 19.50 0.00 0.00 2.59
99 100 1.659098 CTCGGCCGTCTGTTTTGTATC 59.341 52.381 27.15 0.00 0.00 2.24
108 109 1.493950 GATGCAATCTCGGCCGTCTG 61.494 60.000 27.15 18.09 41.17 3.51
134 136 0.758685 AGGAGGAAGATCAGCGGGAG 60.759 60.000 0.00 0.00 0.00 4.30
142 144 3.069443 GTGGTCAGATCAGGAGGAAGATC 59.931 52.174 0.00 0.00 40.68 2.75
151 153 1.142748 GCGAGGTGGTCAGATCAGG 59.857 63.158 0.00 0.00 0.00 3.86
152 154 1.226802 CGCGAGGTGGTCAGATCAG 60.227 63.158 0.00 0.00 0.00 2.90
153 155 0.678684 TACGCGAGGTGGTCAGATCA 60.679 55.000 15.93 0.00 0.00 2.92
159 161 2.126189 GTGGTACGCGAGGTGGTC 60.126 66.667 15.93 0.00 0.00 4.02
169 171 1.301087 TTGTTCAGCCGGTGGTACG 60.301 57.895 1.90 0.00 0.00 3.67
182 184 1.239347 GAGGTGGAAGCCAGTTGTTC 58.761 55.000 0.00 0.00 32.34 3.18
183 185 0.178990 GGAGGTGGAAGCCAGTTGTT 60.179 55.000 0.00 0.00 32.34 2.83
184 186 1.456287 GGAGGTGGAAGCCAGTTGT 59.544 57.895 0.00 0.00 32.34 3.32
185 187 1.303643 GGGAGGTGGAAGCCAGTTG 60.304 63.158 0.00 0.00 32.34 3.16
186 188 2.895424 CGGGAGGTGGAAGCCAGTT 61.895 63.158 0.00 0.00 32.34 3.16
187 189 3.322466 CGGGAGGTGGAAGCCAGT 61.322 66.667 0.00 0.00 32.34 4.00
188 190 4.785453 GCGGGAGGTGGAAGCCAG 62.785 72.222 0.00 0.00 32.34 4.85
215 217 4.812476 TCGAATGGCACGGGAGCG 62.812 66.667 0.00 0.00 34.64 5.03
216 218 3.195698 GTCGAATGGCACGGGAGC 61.196 66.667 0.00 0.00 0.00 4.70
217 219 2.511600 GGTCGAATGGCACGGGAG 60.512 66.667 0.00 0.00 0.00 4.30
218 220 4.444838 CGGTCGAATGGCACGGGA 62.445 66.667 0.00 0.00 0.00 5.14
287 302 2.925170 CTAGAGGGATGGCCGGGG 60.925 72.222 2.18 0.00 33.83 5.73
291 306 2.578714 CGGAGCTAGAGGGATGGCC 61.579 68.421 0.00 0.00 0.00 5.36
293 308 2.578714 GCCGGAGCTAGAGGGATGG 61.579 68.421 5.05 0.00 35.50 3.51
773 809 0.996762 GAGAGAGAGGGAGGGAGGGA 60.997 65.000 0.00 0.00 0.00 4.20
793 829 2.560105 AGGCCAAGAAAATGCAGAGAAC 59.440 45.455 5.01 0.00 0.00 3.01
826 862 1.545614 CGGTCCGCGATTATTGACGG 61.546 60.000 8.23 5.87 46.97 4.79
984 1032 3.790437 ATGGCAGCTCCCCGACTG 61.790 66.667 0.00 0.00 36.96 3.51
1033 1081 0.678048 ATGAGGAACAAGGAAGCGGC 60.678 55.000 0.00 0.00 0.00 6.53
1062 1111 1.325476 GGATACTATACGGGGCGGGG 61.325 65.000 0.00 0.00 0.00 5.73
1063 1112 1.325476 GGGATACTATACGGGGCGGG 61.325 65.000 0.00 0.00 0.00 6.13
1064 1113 1.660560 CGGGATACTATACGGGGCGG 61.661 65.000 0.00 0.00 0.00 6.13
1065 1114 1.660560 CCGGGATACTATACGGGGCG 61.661 65.000 0.00 0.00 42.48 6.13
1066 1115 2.196319 CCGGGATACTATACGGGGC 58.804 63.158 0.00 0.00 42.48 5.80
1070 1119 4.311816 ACACAAACCGGGATACTATACG 57.688 45.455 6.32 0.00 0.00 3.06
1071 1120 5.910614 AGAACACAAACCGGGATACTATAC 58.089 41.667 6.32 0.00 0.00 1.47
1075 1124 3.326880 AGAAGAACACAAACCGGGATACT 59.673 43.478 6.32 0.00 0.00 2.12
1202 1268 4.355437 TCATTTGTTTACACCTTTGTGCG 58.645 39.130 0.00 0.00 46.86 5.34
1228 1294 0.951040 GCCACACTCACACCAGTAGC 60.951 60.000 0.00 0.00 0.00 3.58
1232 1298 2.108976 ACGCCACACTCACACCAG 59.891 61.111 0.00 0.00 0.00 4.00
1234 1300 1.301716 ATCACGCCACACTCACACC 60.302 57.895 0.00 0.00 0.00 4.16
1235 1301 0.880278 ACATCACGCCACACTCACAC 60.880 55.000 0.00 0.00 0.00 3.82
1236 1302 0.879839 CACATCACGCCACACTCACA 60.880 55.000 0.00 0.00 0.00 3.58
1237 1303 0.599991 TCACATCACGCCACACTCAC 60.600 55.000 0.00 0.00 0.00 3.51
1238 1304 0.319813 CTCACATCACGCCACACTCA 60.320 55.000 0.00 0.00 0.00 3.41
1239 1305 0.038251 TCTCACATCACGCCACACTC 60.038 55.000 0.00 0.00 0.00 3.51
1240 1306 0.319900 GTCTCACATCACGCCACACT 60.320 55.000 0.00 0.00 0.00 3.55
1704 1823 1.416813 CTAAAGCAGCCTGTCTCGCG 61.417 60.000 0.00 0.00 0.00 5.87
1876 1998 2.560504 TCGTTGCTGCAGAAAGAGAAA 58.439 42.857 20.43 0.00 0.00 2.52
1877 1999 2.238942 TCGTTGCTGCAGAAAGAGAA 57.761 45.000 20.43 0.00 0.00 2.87
1879 2006 1.802960 ACATCGTTGCTGCAGAAAGAG 59.197 47.619 20.43 10.76 0.00 2.85
2012 2140 5.925397 GCACTACATCCAGATACAATCAGAG 59.075 44.000 0.00 0.00 0.00 3.35
2172 2357 1.001378 GCCGACTGCTTTGTTCATGTT 60.001 47.619 0.00 0.00 36.87 2.71
2226 2414 9.955208 ACATTTGTACTGTATTATGCATCAATG 57.045 29.630 0.19 0.00 0.00 2.82
2244 2443 8.670135 GGCATACACTAACATTGTACATTTGTA 58.330 33.333 11.19 6.93 32.30 2.41
2245 2444 7.393234 AGGCATACACTAACATTGTACATTTGT 59.607 33.333 0.00 0.90 32.30 2.83
2246 2445 7.761409 AGGCATACACTAACATTGTACATTTG 58.239 34.615 0.00 0.19 32.30 2.32
2247 2446 7.829211 AGAGGCATACACTAACATTGTACATTT 59.171 33.333 0.00 0.00 32.30 2.32
2248 2447 7.338710 AGAGGCATACACTAACATTGTACATT 58.661 34.615 0.00 0.00 32.30 2.71
2249 2448 6.889198 AGAGGCATACACTAACATTGTACAT 58.111 36.000 0.00 0.00 32.30 2.29
2250 2449 6.294361 AGAGGCATACACTAACATTGTACA 57.706 37.500 0.00 0.00 32.30 2.90
2251 2450 6.594159 ACAAGAGGCATACACTAACATTGTAC 59.406 38.462 0.00 0.00 32.30 2.90
2370 2570 2.436417 CCATATACATCCCAAAGGCCG 58.564 52.381 0.00 0.00 0.00 6.13
2430 2630 4.471025 TCTTCCCTTGTCAGAGCATGATTA 59.529 41.667 0.00 0.00 40.92 1.75
2464 2664 4.806330 AGTGGTTACTACAATCTGTCGTG 58.194 43.478 1.05 0.00 34.74 4.35
2548 2749 9.179909 CACCTCTACTGAATCTCTAGAAGTAAA 57.820 37.037 0.00 0.00 0.00 2.01
2586 2787 2.422127 ACCAACTTTCCGTGTGTTTCTG 59.578 45.455 0.00 0.00 0.00 3.02
2587 2788 2.681344 GACCAACTTTCCGTGTGTTTCT 59.319 45.455 0.00 0.00 0.00 2.52
2888 3092 9.791820 CAAAATGATCTCTTGCACATTAATACA 57.208 29.630 0.00 0.00 33.50 2.29
3273 3482 2.297033 GGCAAAGAGGCAGAAAATGACA 59.703 45.455 0.00 0.00 40.68 3.58
3380 3589 4.201841 CGTCTTTTTCAACAAGTACCGGTT 60.202 41.667 15.04 0.00 0.00 4.44
3721 3947 9.826574 TCACATACAAAGATTATACAGGTAACC 57.173 33.333 0.00 0.00 37.17 2.85
3752 3978 8.792830 AAAATGCTCACATTACACAGTAGTAT 57.207 30.769 0.00 0.00 45.90 2.12
3753 3979 9.146984 GTAAAATGCTCACATTACACAGTAGTA 57.853 33.333 0.00 0.00 45.90 1.82
3767 3993 3.933332 ACTAAGAGGCGTAAAATGCTCAC 59.067 43.478 0.00 0.00 0.00 3.51
3779 4005 1.726853 CTGGGTCAAACTAAGAGGCG 58.273 55.000 0.00 0.00 0.00 5.52
3881 4107 8.105829 TCAAGGCTAAGATCTGAAAAGAAAGAT 58.894 33.333 0.00 0.00 35.84 2.40
3887 4115 6.373774 ACACATCAAGGCTAAGATCTGAAAAG 59.626 38.462 10.57 0.00 0.00 2.27
4060 4288 3.848272 AAAAACATACCACGCAGATGG 57.152 42.857 0.00 0.00 46.10 3.51
4163 4391 7.415653 GGGGTACATCAGAATCTCAACATTTTC 60.416 40.741 0.00 0.00 0.00 2.29
4174 4402 1.700186 GGGAGGGGGTACATCAGAATC 59.300 57.143 0.00 0.00 0.00 2.52
4180 4408 0.327191 TGGAAGGGAGGGGGTACATC 60.327 60.000 0.00 0.00 0.00 3.06
4186 4414 3.706389 ATTAATTTGGAAGGGAGGGGG 57.294 47.619 0.00 0.00 0.00 5.40
4212 4440 6.224584 AGTTTGACTTAGGACAAAGCTAGAC 58.775 40.000 2.92 0.00 37.65 2.59
4306 5042 8.593679 TCCAGTAAAACATAAGATGACAAGAGA 58.406 33.333 0.00 0.00 0.00 3.10
4321 5057 7.090953 ACGAACAAAGAAATCCAGTAAAACA 57.909 32.000 0.00 0.00 0.00 2.83
4322 5058 6.356190 CGACGAACAAAGAAATCCAGTAAAAC 59.644 38.462 0.00 0.00 0.00 2.43
4336 5072 1.148310 ATGGCAGTCGACGAACAAAG 58.852 50.000 10.46 0.00 0.00 2.77
4337 5073 1.588674 AATGGCAGTCGACGAACAAA 58.411 45.000 10.46 0.00 0.00 2.83
4338 5074 2.442212 TAATGGCAGTCGACGAACAA 57.558 45.000 10.46 0.00 0.00 2.83
4366 5102 9.832445 CACATATTTAGTTACATTCAGGGTAGT 57.168 33.333 0.00 0.00 0.00 2.73
4369 5105 9.342308 CATCACATATTTAGTTACATTCAGGGT 57.658 33.333 0.00 0.00 0.00 4.34
4477 5213 3.181440 TGATCCTTGCAAGAACTTCCAGT 60.181 43.478 28.05 2.52 0.00 4.00
4605 5341 9.910267 TTCAAGAGAAGATGGATTCATATTTCA 57.090 29.630 11.41 0.00 35.24 2.69
4610 5346 9.557061 CTCAATTCAAGAGAAGATGGATTCATA 57.443 33.333 0.00 0.00 37.14 2.15
4611 5347 8.053963 ACTCAATTCAAGAGAAGATGGATTCAT 58.946 33.333 0.00 0.00 37.14 2.57
4612 5348 7.400439 ACTCAATTCAAGAGAAGATGGATTCA 58.600 34.615 0.00 0.00 37.14 2.57
4613 5349 7.862512 ACTCAATTCAAGAGAAGATGGATTC 57.137 36.000 0.00 0.00 37.14 2.52
4614 5350 8.108364 AGAACTCAATTCAAGAGAAGATGGATT 58.892 33.333 0.00 0.00 40.09 3.01
4615 5351 7.553402 CAGAACTCAATTCAAGAGAAGATGGAT 59.447 37.037 0.00 0.00 40.09 3.41
4621 5357 6.857777 ACACAGAACTCAATTCAAGAGAAG 57.142 37.500 0.00 0.00 40.09 2.85
4654 5390 5.489792 TTGATAGAGAACAGCCTTCAGTT 57.510 39.130 0.00 0.00 0.00 3.16
4655 5391 5.690464 ATTGATAGAGAACAGCCTTCAGT 57.310 39.130 0.00 0.00 0.00 3.41
4656 5392 6.998968 AAATTGATAGAGAACAGCCTTCAG 57.001 37.500 0.00 0.00 0.00 3.02
4682 5418 9.753674 TGGAAGTTAGAAATATCATTCCAGTTT 57.246 29.630 0.00 0.00 39.70 2.66
4683 5419 9.753674 TTGGAAGTTAGAAATATCATTCCAGTT 57.246 29.630 4.18 0.00 43.90 3.16
4684 5420 9.927081 ATTGGAAGTTAGAAATATCATTCCAGT 57.073 29.630 4.18 0.00 43.90 4.00
4718 5454 2.433239 GGTAAATAGTTCGGGAGCCTGA 59.567 50.000 0.00 0.00 0.00 3.86
4811 5547 4.021544 ACCGCAAAGGCTTCATTAATTTCA 60.022 37.500 0.00 0.00 46.52 2.69
4820 5556 0.036765 ATCGTACCGCAAAGGCTTCA 60.037 50.000 0.00 0.00 46.52 3.02
4899 5636 3.727419 GCAACAGCCTGCAATAAGG 57.273 52.632 0.00 0.00 42.17 2.69
5091 5829 6.017934 AGCACCGCATCTAATTTACACTAATG 60.018 38.462 0.00 0.00 0.00 1.90
5103 5841 0.740868 GCTGTCAGCACCGCATCTAA 60.741 55.000 20.16 0.00 41.89 2.10
5125 5863 7.593825 ACATTAATCTTTTCCTGCAAGTACAC 58.406 34.615 0.00 0.00 0.00 2.90
5157 5895 2.388310 GTCCTAAAGACACAGCTCCC 57.612 55.000 0.00 0.00 45.55 4.30
5517 6275 3.304057 GGGACGAGCAGAAACAGAAAAAG 60.304 47.826 0.00 0.00 0.00 2.27
6250 9327 8.020777 TGGGTATGATCATATTTGCAAACATT 57.979 30.769 18.18 0.94 0.00 2.71
6257 9334 6.488006 ACAGACTTGGGTATGATCATATTTGC 59.512 38.462 18.18 5.69 37.99 3.68
6272 9349 0.953960 GCACGGGTTACAGACTTGGG 60.954 60.000 0.00 0.00 0.00 4.12
6273 9350 1.289109 CGCACGGGTTACAGACTTGG 61.289 60.000 0.00 0.00 0.00 3.61
6274 9351 0.319211 TCGCACGGGTTACAGACTTG 60.319 55.000 0.00 0.00 0.00 3.16
6277 9354 1.219646 TTTTCGCACGGGTTACAGAC 58.780 50.000 0.00 0.00 0.00 3.51
6309 9386 6.532657 GGCAAAAATCTCAACTATCAATGTGG 59.467 38.462 0.00 0.00 0.00 4.17
6312 9389 6.532657 GTGGGCAAAAATCTCAACTATCAATG 59.467 38.462 0.00 0.00 0.00 2.82
6315 9392 5.324409 AGTGGGCAAAAATCTCAACTATCA 58.676 37.500 0.00 0.00 0.00 2.15
6320 9397 3.569701 TCAGAGTGGGCAAAAATCTCAAC 59.430 43.478 0.00 0.00 0.00 3.18
6327 9404 6.662865 TTTTCATATCAGAGTGGGCAAAAA 57.337 33.333 0.00 0.00 0.00 1.94
6328 9405 6.267471 ACTTTTTCATATCAGAGTGGGCAAAA 59.733 34.615 0.00 0.00 0.00 2.44
6348 9425 5.648092 GGTGACAGCACAGGATATAACTTTT 59.352 40.000 0.00 0.00 46.96 2.27
6350 9427 4.471386 AGGTGACAGCACAGGATATAACTT 59.529 41.667 7.50 0.00 46.96 2.66
6370 9468 4.792068 TGATGAAGTCAAAGGAAACAGGT 58.208 39.130 0.00 0.00 32.78 4.00
6373 9471 7.587037 AAATCTGATGAAGTCAAAGGAAACA 57.413 32.000 0.00 0.00 36.14 2.83
6406 9509 3.696898 TGCGTTGTTGTAAAATGGTGAC 58.303 40.909 0.00 0.00 0.00 3.67
6407 9510 4.541779 GATGCGTTGTTGTAAAATGGTGA 58.458 39.130 0.00 0.00 0.00 4.02
6408 9511 3.360463 CGATGCGTTGTTGTAAAATGGTG 59.640 43.478 0.00 0.00 0.00 4.17
6409 9512 3.560503 CGATGCGTTGTTGTAAAATGGT 58.439 40.909 0.00 0.00 0.00 3.55
6410 9513 2.341168 GCGATGCGTTGTTGTAAAATGG 59.659 45.455 0.00 0.00 0.00 3.16
6411 9514 2.341168 GGCGATGCGTTGTTGTAAAATG 59.659 45.455 0.00 0.00 0.00 2.32
6412 9515 2.030717 TGGCGATGCGTTGTTGTAAAAT 60.031 40.909 0.00 0.00 0.00 1.82
6413 9516 1.333931 TGGCGATGCGTTGTTGTAAAA 59.666 42.857 0.00 0.00 0.00 1.52
6414 9517 0.945099 TGGCGATGCGTTGTTGTAAA 59.055 45.000 0.00 0.00 0.00 2.01
6415 9518 0.945099 TTGGCGATGCGTTGTTGTAA 59.055 45.000 0.00 0.00 0.00 2.41
6417 9520 0.317770 CTTTGGCGATGCGTTGTTGT 60.318 50.000 0.00 0.00 0.00 3.32
6418 9521 1.608093 GCTTTGGCGATGCGTTGTTG 61.608 55.000 0.00 0.00 0.00 3.33
6419 9522 1.371635 GCTTTGGCGATGCGTTGTT 60.372 52.632 0.00 0.00 0.00 2.83
6420 9523 2.255252 GCTTTGGCGATGCGTTGT 59.745 55.556 0.00 0.00 0.00 3.32
6421 9524 2.082366 GTGCTTTGGCGATGCGTTG 61.082 57.895 7.97 0.00 42.25 4.10
6422 9525 1.865788 ATGTGCTTTGGCGATGCGTT 61.866 50.000 7.97 0.00 42.25 4.84
6423 9526 1.865788 AATGTGCTTTGGCGATGCGT 61.866 50.000 7.97 0.00 42.25 5.24
6424 9527 0.733566 AAATGTGCTTTGGCGATGCG 60.734 50.000 7.97 0.00 42.25 4.73
6425 9528 1.431496 AAAATGTGCTTTGGCGATGC 58.569 45.000 5.68 5.68 42.25 3.91
6426 9529 3.058450 TGAAAAATGTGCTTTGGCGATG 58.942 40.909 0.00 0.00 42.25 3.84
6427 9530 3.383620 TGAAAAATGTGCTTTGGCGAT 57.616 38.095 0.00 0.00 42.25 4.58
6428 9531 2.879002 TGAAAAATGTGCTTTGGCGA 57.121 40.000 0.00 0.00 42.25 5.54
6429 9532 4.236935 ACTATGAAAAATGTGCTTTGGCG 58.763 39.130 0.00 0.00 42.25 5.69
6430 9533 5.106987 CCAACTATGAAAAATGTGCTTTGGC 60.107 40.000 0.00 0.00 39.26 4.52
6431 9534 5.990996 ACCAACTATGAAAAATGTGCTTTGG 59.009 36.000 0.00 0.00 36.62 3.28
6432 9535 7.481275 AACCAACTATGAAAAATGTGCTTTG 57.519 32.000 0.00 0.00 0.00 2.77
6433 9536 9.206870 CATAACCAACTATGAAAAATGTGCTTT 57.793 29.630 0.00 0.00 31.94 3.51
6434 9537 8.367156 ACATAACCAACTATGAAAAATGTGCTT 58.633 29.630 0.00 0.00 34.07 3.91
6435 9538 7.895759 ACATAACCAACTATGAAAAATGTGCT 58.104 30.769 0.00 0.00 34.07 4.40
6436 9539 9.632807 TTACATAACCAACTATGAAAAATGTGC 57.367 29.630 0.00 0.00 34.07 4.57
6454 9557 9.567848 CATGGTTACTTGGTTCATTTACATAAC 57.432 33.333 0.00 0.00 0.00 1.89
6456 9559 8.871629 ACATGGTTACTTGGTTCATTTACATA 57.128 30.769 0.00 0.00 0.00 2.29
6469 9572 2.095059 GGAGCAGCAACATGGTTACTTG 60.095 50.000 0.00 0.00 0.00 3.16
6584 9692 4.404073 TGTTACAGGATTTGGTTGCACTTT 59.596 37.500 0.00 0.00 0.00 2.66
6637 9746 9.851686 ACCTTTATCTTGTATATGCTCAATGAA 57.148 29.630 0.00 0.00 0.00 2.57
6638 9747 9.851686 AACCTTTATCTTGTATATGCTCAATGA 57.148 29.630 0.00 0.00 0.00 2.57
6713 9836 0.456221 ACTTGTCAGACGCCTATCGG 59.544 55.000 0.00 0.00 43.86 4.18
6716 9839 4.876107 CCAAATTACTTGTCAGACGCCTAT 59.124 41.667 0.00 0.00 32.65 2.57
6717 9840 4.250464 CCAAATTACTTGTCAGACGCCTA 58.750 43.478 0.00 0.00 32.65 3.93
6719 9842 2.161609 CCCAAATTACTTGTCAGACGCC 59.838 50.000 0.00 0.00 32.65 5.68
6720 9843 2.812011 ACCCAAATTACTTGTCAGACGC 59.188 45.455 0.00 0.00 32.65 5.19
6721 9844 4.390909 GGTACCCAAATTACTTGTCAGACG 59.609 45.833 0.00 0.00 32.65 4.18
6722 9845 5.874895 GGTACCCAAATTACTTGTCAGAC 57.125 43.478 0.00 0.00 32.65 3.51
6747 9877 5.685068 GCCCAAAATTGCAAACACAAATTAC 59.315 36.000 1.71 0.00 32.27 1.89
6748 9878 5.221126 GGCCCAAAATTGCAAACACAAATTA 60.221 36.000 1.71 0.00 32.27 1.40
6754 9884 1.603326 CTGGCCCAAAATTGCAAACAC 59.397 47.619 1.71 0.00 0.00 3.32
6778 9908 1.606885 TAGTACAAAGGTCGCCCCGG 61.607 60.000 0.00 0.00 38.74 5.73
6784 9914 7.765307 TGGAGTAAACTATAGTACAAAGGTCG 58.235 38.462 5.65 0.00 0.00 4.79
6797 9927 8.957466 GCTACAAGGAAAAATGGAGTAAACTAT 58.043 33.333 0.00 0.00 29.78 2.12
6798 9928 8.161425 AGCTACAAGGAAAAATGGAGTAAACTA 58.839 33.333 0.00 0.00 29.78 2.24
6799 9929 7.004691 AGCTACAAGGAAAAATGGAGTAAACT 58.995 34.615 0.00 0.00 29.78 2.66
6800 9930 7.215719 AGCTACAAGGAAAAATGGAGTAAAC 57.784 36.000 0.00 0.00 29.78 2.01
6801 9931 9.174166 GATAGCTACAAGGAAAAATGGAGTAAA 57.826 33.333 0.00 0.00 29.78 2.01
6802 9932 8.548877 AGATAGCTACAAGGAAAAATGGAGTAA 58.451 33.333 0.00 0.00 29.78 2.24
6803 9933 7.987458 CAGATAGCTACAAGGAAAAATGGAGTA 59.013 37.037 0.00 0.00 29.78 2.59
6804 9934 6.825721 CAGATAGCTACAAGGAAAAATGGAGT 59.174 38.462 0.00 0.00 29.78 3.85
6805 9935 6.261826 CCAGATAGCTACAAGGAAAAATGGAG 59.738 42.308 0.00 0.00 0.00 3.86
6806 9936 6.069673 TCCAGATAGCTACAAGGAAAAATGGA 60.070 38.462 0.00 0.00 0.00 3.41
6814 9944 8.721133 TTATAACATCCAGATAGCTACAAGGA 57.279 34.615 11.10 11.10 0.00 3.36
6816 9948 8.310382 AGCTTATAACATCCAGATAGCTACAAG 58.690 37.037 0.00 0.00 0.00 3.16
6817 9949 8.195165 AGCTTATAACATCCAGATAGCTACAA 57.805 34.615 0.00 0.00 0.00 2.41
6870 10005 4.756642 TGAAACTCCACAGCATGAACTAAG 59.243 41.667 0.00 0.00 39.69 2.18
6873 10008 3.213206 TGAAACTCCACAGCATGAACT 57.787 42.857 0.00 0.00 39.69 3.01
6880 10015 1.873591 ACGTGATTGAAACTCCACAGC 59.126 47.619 0.00 0.00 0.00 4.40
6884 10019 4.509970 CACAAGTACGTGATTGAAACTCCA 59.490 41.667 16.00 0.00 39.34 3.86
6888 10023 6.758593 TCTACACAAGTACGTGATTGAAAC 57.241 37.500 16.00 0.00 39.34 2.78
6894 10029 7.603651 AGAAGAAATCTACACAAGTACGTGAT 58.396 34.615 16.00 5.77 40.26 3.06
6896 10036 6.308282 GGAGAAGAAATCTACACAAGTACGTG 59.692 42.308 7.29 7.29 39.03 4.49
6910 10050 3.055530 TGAGCCTGACTGGAGAAGAAATC 60.056 47.826 1.91 0.00 38.35 2.17
6919 10059 0.681733 GTGAACTGAGCCTGACTGGA 59.318 55.000 1.91 0.00 38.35 3.86
6920 10060 0.668706 CGTGAACTGAGCCTGACTGG 60.669 60.000 0.00 0.00 39.35 4.00
6922 10062 1.115930 ACCGTGAACTGAGCCTGACT 61.116 55.000 0.00 0.00 0.00 3.41
6923 10063 0.601558 TACCGTGAACTGAGCCTGAC 59.398 55.000 0.00 0.00 0.00 3.51
6924 10064 0.601558 GTACCGTGAACTGAGCCTGA 59.398 55.000 0.00 0.00 0.00 3.86
6926 10066 1.045407 TTGTACCGTGAACTGAGCCT 58.955 50.000 0.00 0.00 0.00 4.58
6928 10068 0.782384 CGTTGTACCGTGAACTGAGC 59.218 55.000 0.00 0.00 0.00 4.26
6929 10069 2.129823 ACGTTGTACCGTGAACTGAG 57.870 50.000 0.00 0.00 40.08 3.35
6938 10078 4.392619 TTTTTCATAGCACGTTGTACCG 57.607 40.909 0.00 0.00 0.00 4.02
6961 10129 7.934855 AAACCTATCTCTAGTTTCGTGACTA 57.065 36.000 0.00 1.82 0.00 2.59
6989 10157 8.119226 CACTTGTCTCTAGTTTTTGAAGTGAAG 58.881 37.037 0.00 0.00 40.88 3.02
6990 10158 7.065803 CCACTTGTCTCTAGTTTTTGAAGTGAA 59.934 37.037 0.00 0.00 40.88 3.18
6991 10159 6.538742 CCACTTGTCTCTAGTTTTTGAAGTGA 59.461 38.462 0.00 0.00 40.88 3.41
6992 10160 6.238484 CCCACTTGTCTCTAGTTTTTGAAGTG 60.238 42.308 0.00 0.00 39.05 3.16
6993 10161 5.823045 CCCACTTGTCTCTAGTTTTTGAAGT 59.177 40.000 0.00 0.00 0.00 3.01
6994 10162 5.823045 ACCCACTTGTCTCTAGTTTTTGAAG 59.177 40.000 0.00 0.00 0.00 3.02
6996 10164 5.367945 ACCCACTTGTCTCTAGTTTTTGA 57.632 39.130 0.00 0.00 0.00 2.69
6997 10165 7.562454 TTAACCCACTTGTCTCTAGTTTTTG 57.438 36.000 0.00 0.00 0.00 2.44
7002 10170 8.434392 TGTAAATTTAACCCACTTGTCTCTAGT 58.566 33.333 0.00 0.00 0.00 2.57
7010 10178 8.669946 ATTTTGGTGTAAATTTAACCCACTTG 57.330 30.769 18.72 0.00 32.70 3.16
7013 10181 8.369424 ACCTATTTTGGTGTAAATTTAACCCAC 58.631 33.333 18.72 14.08 39.17 4.61
7023 10191 8.979534 ACCAGTTTTTACCTATTTTGGTGTAAA 58.020 29.630 0.00 0.00 41.05 2.01
7025 10193 7.778853 TGACCAGTTTTTACCTATTTTGGTGTA 59.221 33.333 0.00 0.00 41.05 2.90
7026 10194 6.608002 TGACCAGTTTTTACCTATTTTGGTGT 59.392 34.615 0.00 0.00 41.05 4.16
7039 10207 3.188159 ACGCAGACTGACCAGTTTTTA 57.812 42.857 6.65 0.00 42.66 1.52
7045 10213 0.882042 AGCAAACGCAGACTGACCAG 60.882 55.000 6.65 0.00 0.00 4.00
7048 10216 0.937304 TTCAGCAAACGCAGACTGAC 59.063 50.000 6.65 0.00 38.81 3.51
7049 10217 0.937304 GTTCAGCAAACGCAGACTGA 59.063 50.000 6.65 0.00 37.38 3.41
7051 10219 0.940126 CAGTTCAGCAAACGCAGACT 59.060 50.000 0.00 0.00 43.02 3.24
7052 10220 0.657840 ACAGTTCAGCAAACGCAGAC 59.342 50.000 0.00 0.00 43.02 3.51
7053 10221 0.657312 CACAGTTCAGCAAACGCAGA 59.343 50.000 0.00 0.00 43.02 4.26
7054 10222 0.378257 ACACAGTTCAGCAAACGCAG 59.622 50.000 0.00 0.00 43.02 5.18
7056 10224 1.191096 CAACACAGTTCAGCAAACGC 58.809 50.000 0.00 0.00 43.02 4.84
7059 10227 1.090728 TCGCAACACAGTTCAGCAAA 58.909 45.000 0.00 0.00 0.00 3.68
7111 10282 9.030452 AGATAATCTAGCTTATCCAACGATCTT 57.970 33.333 18.40 0.00 38.38 2.40
7142 10407 3.340034 ACGATAATCTCACCCGCAAAAA 58.660 40.909 0.00 0.00 0.00 1.94
7143 10408 2.980568 ACGATAATCTCACCCGCAAAA 58.019 42.857 0.00 0.00 0.00 2.44
7144 10409 2.684001 ACGATAATCTCACCCGCAAA 57.316 45.000 0.00 0.00 0.00 3.68
7145 10410 3.804786 TTACGATAATCTCACCCGCAA 57.195 42.857 0.00 0.00 0.00 4.85
7146 10411 3.305813 GGATTACGATAATCTCACCCGCA 60.306 47.826 13.67 0.00 0.00 5.69
7147 10412 3.251571 GGATTACGATAATCTCACCCGC 58.748 50.000 13.67 0.00 0.00 6.13
7148 10413 4.235360 GTGGATTACGATAATCTCACCCG 58.765 47.826 13.67 0.00 0.00 5.28
7149 10414 4.039973 TGGTGGATTACGATAATCTCACCC 59.960 45.833 27.31 19.83 41.75 4.61
7150 10415 5.209818 TGGTGGATTACGATAATCTCACC 57.790 43.478 25.94 25.94 42.20 4.02
7151 10416 5.692204 CACTGGTGGATTACGATAATCTCAC 59.308 44.000 18.02 18.02 32.26 3.51
7152 10417 5.362717 ACACTGGTGGATTACGATAATCTCA 59.637 40.000 13.67 9.39 34.19 3.27
7153 10418 5.844004 ACACTGGTGGATTACGATAATCTC 58.156 41.667 13.67 9.34 34.19 2.75
7154 10419 5.871396 ACACTGGTGGATTACGATAATCT 57.129 39.130 13.67 0.00 34.19 2.40
7183 10448 0.322456 GGGTGCACTTCACTATGCCA 60.322 55.000 17.98 0.00 44.98 4.92
7187 10452 4.617875 GCGGGTGCACTTCACTAT 57.382 55.556 17.98 0.00 44.98 2.12
7199 10464 2.383245 CTGTCCAGAACACTGCGGGT 62.383 60.000 0.00 0.00 33.24 5.28
7200 10465 1.669115 CTGTCCAGAACACTGCGGG 60.669 63.158 0.00 0.00 33.24 6.13
7223 10497 2.423538 GCTGGGTCTGCGAAATGTAATT 59.576 45.455 0.00 0.00 38.98 1.40
7224 10498 2.017049 GCTGGGTCTGCGAAATGTAAT 58.983 47.619 0.00 0.00 0.00 1.89
7226 10500 0.613260 AGCTGGGTCTGCGAAATGTA 59.387 50.000 0.00 0.00 33.59 2.29
7228 10502 0.674581 TGAGCTGGGTCTGCGAAATG 60.675 55.000 0.00 0.00 33.59 2.32
7229 10503 0.674895 GTGAGCTGGGTCTGCGAAAT 60.675 55.000 0.00 0.00 33.59 2.17
7230 10504 1.301716 GTGAGCTGGGTCTGCGAAA 60.302 57.895 0.00 0.00 33.59 3.46
7231 10505 2.343758 GTGAGCTGGGTCTGCGAA 59.656 61.111 0.00 0.00 33.59 4.70
7236 10623 0.548682 AGGAATGGTGAGCTGGGTCT 60.549 55.000 0.00 0.00 0.00 3.85
7245 10632 1.031571 GCCGCATTGAGGAATGGTGA 61.032 55.000 10.96 0.00 39.62 4.02
7246 10633 1.434696 GCCGCATTGAGGAATGGTG 59.565 57.895 10.96 0.00 39.62 4.17
7296 10683 1.078567 GGCTGAGGTCTGAAGGCTG 60.079 63.158 0.00 0.00 33.92 4.85
7297 10684 2.297129 GGGCTGAGGTCTGAAGGCT 61.297 63.158 1.43 0.00 36.76 4.58
7339 10733 4.909088 TGGGACTAAAGAACCAGGAAACTA 59.091 41.667 0.00 0.00 40.21 2.24
7413 10807 0.108186 TCATTCTGGCACGCCTACTG 60.108 55.000 9.92 2.74 36.94 2.74
7432 10826 1.523711 CGTGTGTCTGGTGTGCCTT 60.524 57.895 0.00 0.00 35.27 4.35
7467 13622 2.539338 CGGAACCACCACAACACGG 61.539 63.158 0.00 0.00 38.90 4.94
7510 13665 6.753744 GCCACAATCATTAATCCTTGAGTTTC 59.246 38.462 11.61 0.00 0.00 2.78
7532 13687 0.750850 GCTTATCTAGACGGTGGCCA 59.249 55.000 0.00 0.00 0.00 5.36
7546 13701 6.317088 GCATATTTGACATATGCGTGCTTAT 58.683 36.000 7.71 0.00 44.72 1.73
7561 13716 5.680594 AAAAGATTGCCCAGCATATTTGA 57.319 34.783 0.00 0.00 38.76 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.