Multiple sequence alignment - TraesCS2D01G034800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G034800 chr2D 100.000 2519 0 0 1 2519 13440673 13438155 0.000000e+00 4652.0
1 TraesCS2D01G034800 chr2D 90.254 708 57 10 2 700 13217890 13218594 0.000000e+00 915.0
2 TraesCS2D01G034800 chr2D 89.286 252 18 5 1000 1251 630011205 630010963 8.750000e-80 307.0
3 TraesCS2D01G034800 chr2D 85.185 297 35 6 958 1248 13508795 13509088 1.890000e-76 296.0
4 TraesCS2D01G034800 chr2D 85.577 208 15 4 1344 1541 630010024 630009822 1.180000e-48 204.0
5 TraesCS2D01G034800 chr2A 90.625 704 60 4 2 700 15451437 15450735 0.000000e+00 929.0
6 TraesCS2D01G034800 chr2A 87.973 582 33 16 699 1249 15450344 15449769 0.000000e+00 652.0
7 TraesCS2D01G034800 chr2A 88.095 252 21 6 1000 1251 2895356 2895598 8.810000e-75 291.0
8 TraesCS2D01G034800 chr2A 86.454 251 31 2 1001 1251 15602459 15602706 3.190000e-69 272.0
9 TraesCS2D01G034800 chr2A 86.607 224 10 6 1344 1548 15448864 15448642 1.950000e-56 230.0
10 TraesCS2D01G034800 chr2A 86.047 172 14 2 1344 1505 2854530 2854701 2.580000e-40 176.0
11 TraesCS2D01G034800 chr2A 97.403 77 2 0 1250 1326 15449162 15449086 5.650000e-27 132.0
12 TraesCS2D01G034800 chr2B 89.790 715 54 14 2 700 24100094 24099383 0.000000e+00 898.0
13 TraesCS2D01G034800 chr2B 84.655 580 44 21 699 1251 24098996 24098435 1.030000e-148 536.0
14 TraesCS2D01G034800 chr2B 88.492 252 20 4 1000 1251 772982247 772982005 1.890000e-76 296.0
15 TraesCS2D01G034800 chr2B 87.200 250 29 2 1000 1249 24110292 24110046 5.310000e-72 281.0
16 TraesCS2D01G034800 chr2B 85.769 260 32 3 992 1249 24124403 24124659 1.150000e-68 270.0
17 TraesCS2D01G034800 chr2B 86.636 217 16 3 1344 1549 24097500 24097286 7.010000e-56 228.0
18 TraesCS2D01G034800 chr3D 95.382 563 18 5 1961 2519 357731648 357731090 0.000000e+00 889.0
19 TraesCS2D01G034800 chr5A 94.643 560 26 4 1961 2519 456610704 456611260 0.000000e+00 865.0
20 TraesCS2D01G034800 chr7A 91.652 563 43 4 1959 2519 67531188 67531748 0.000000e+00 776.0
21 TraesCS2D01G034800 chr5D 91.652 563 38 8 1960 2519 409443224 409442668 0.000000e+00 771.0
22 TraesCS2D01G034800 chr4A 91.474 563 40 7 1961 2519 42117265 42116707 0.000000e+00 767.0
23 TraesCS2D01G034800 chrUn 91.413 559 41 7 1962 2516 38163039 38163594 0.000000e+00 760.0
24 TraesCS2D01G034800 chrUn 85.816 141 19 1 1377 1516 15585442 15585582 5.610000e-32 148.0
25 TraesCS2D01G034800 chrUn 85.612 139 19 1 1379 1516 15427830 15427968 7.260000e-31 145.0
26 TraesCS2D01G034800 chrUn 85.612 139 19 1 1379 1516 15736442 15736304 7.260000e-31 145.0
27 TraesCS2D01G034800 chrUn 85.612 139 19 1 1379 1516 274167080 274167218 7.260000e-31 145.0
28 TraesCS2D01G034800 chr5B 91.941 546 38 4 1978 2519 558560256 558560799 0.000000e+00 760.0
29 TraesCS2D01G034800 chr5B 91.266 561 42 7 1961 2519 655140332 655140887 0.000000e+00 758.0
30 TraesCS2D01G034800 chr7B 91.087 561 39 10 1961 2519 94261513 94262064 0.000000e+00 749.0
31 TraesCS2D01G034800 chr4D 84.507 71 11 0 699 769 100335623 100335693 1.250000e-08 71.3
32 TraesCS2D01G034800 chr4B 88.889 45 3 2 728 771 544127425 544127382 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G034800 chr2D 13438155 13440673 2518 True 4652.00 4652 100.0000 1 2519 1 chr2D.!!$R1 2518
1 TraesCS2D01G034800 chr2D 13217890 13218594 704 False 915.00 915 90.2540 2 700 1 chr2D.!!$F1 698
2 TraesCS2D01G034800 chr2D 630009822 630011205 1383 True 255.50 307 87.4315 1000 1541 2 chr2D.!!$R2 541
3 TraesCS2D01G034800 chr2A 15448642 15451437 2795 True 485.75 929 90.6520 2 1548 4 chr2A.!!$R1 1546
4 TraesCS2D01G034800 chr2B 24097286 24100094 2808 True 554.00 898 87.0270 2 1549 3 chr2B.!!$R3 1547
5 TraesCS2D01G034800 chr3D 357731090 357731648 558 True 889.00 889 95.3820 1961 2519 1 chr3D.!!$R1 558
6 TraesCS2D01G034800 chr5A 456610704 456611260 556 False 865.00 865 94.6430 1961 2519 1 chr5A.!!$F1 558
7 TraesCS2D01G034800 chr7A 67531188 67531748 560 False 776.00 776 91.6520 1959 2519 1 chr7A.!!$F1 560
8 TraesCS2D01G034800 chr5D 409442668 409443224 556 True 771.00 771 91.6520 1960 2519 1 chr5D.!!$R1 559
9 TraesCS2D01G034800 chr4A 42116707 42117265 558 True 767.00 767 91.4740 1961 2519 1 chr4A.!!$R1 558
10 TraesCS2D01G034800 chrUn 38163039 38163594 555 False 760.00 760 91.4130 1962 2516 1 chrUn.!!$F3 554
11 TraesCS2D01G034800 chr5B 558560256 558560799 543 False 760.00 760 91.9410 1978 2519 1 chr5B.!!$F1 541
12 TraesCS2D01G034800 chr5B 655140332 655140887 555 False 758.00 758 91.2660 1961 2519 1 chr5B.!!$F2 558
13 TraesCS2D01G034800 chr7B 94261513 94262064 551 False 749.00 749 91.0870 1961 2519 1 chr7B.!!$F1 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
324 330 0.8501 ATGTGGTGGAGTTCAACCCA 59.15 50.0 3.26 2.02 30.29 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1906 3897 0.033601 ATGCAGGAGACTCGTCCTCT 60.034 55.0 0.0 0.0 44.25 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.558396 ACCAATCTTTGCTCATTTTAATTCAAA 57.442 25.926 0.00 0.00 0.00 2.69
37 38 9.815936 CCAATCTTTGCTCATTTTAATTCAAAC 57.184 29.630 0.00 0.00 0.00 2.93
62 68 5.813080 ATATGCAGTAACCTCGTTTTTCC 57.187 39.130 0.00 0.00 0.00 3.13
71 77 7.172703 CAGTAACCTCGTTTTTCCTTCTTGTAT 59.827 37.037 0.00 0.00 0.00 2.29
95 101 3.119245 CCTTTGGTGGAATGCTTCATCAG 60.119 47.826 0.00 0.00 0.00 2.90
120 126 9.584008 AGCATAATGATATGAATTCCTTGAACT 57.416 29.630 2.27 0.00 41.25 3.01
121 127 9.622004 GCATAATGATATGAATTCCTTGAACTG 57.378 33.333 2.27 0.00 41.25 3.16
129 135 6.391227 TGAATTCCTTGAACTGTTTTCCTC 57.609 37.500 2.27 0.00 0.00 3.71
130 136 6.129179 TGAATTCCTTGAACTGTTTTCCTCT 58.871 36.000 2.27 0.00 0.00 3.69
132 138 7.944554 TGAATTCCTTGAACTGTTTTCCTCTAT 59.055 33.333 2.27 0.00 0.00 1.98
134 140 9.807921 AATTCCTTGAACTGTTTTCCTCTATTA 57.192 29.630 0.00 0.00 0.00 0.98
135 141 9.981460 ATTCCTTGAACTGTTTTCCTCTATTAT 57.019 29.630 0.00 0.00 0.00 1.28
204 210 4.436998 GTGGACTGCCTCGACCCG 62.437 72.222 0.00 0.00 34.31 5.28
261 267 1.153823 CCTCTCATTCCGCGACGTT 60.154 57.895 8.23 0.00 0.00 3.99
324 330 0.850100 ATGTGGTGGAGTTCAACCCA 59.150 50.000 3.26 2.02 30.29 4.51
412 418 2.286872 AGATCTCAAAATGAGCAGCGG 58.713 47.619 2.48 0.00 43.95 5.52
447 456 2.230750 AGCAGCAAAGAGGATTTTCAGC 59.769 45.455 0.00 0.00 0.00 4.26
551 564 2.652172 GCTGCAAAACGTCTTCGAATTC 59.348 45.455 0.00 0.00 40.62 2.17
593 606 3.221771 TGTTGGTTCTCCTTTCACATGG 58.778 45.455 0.00 0.00 34.23 3.66
613 626 2.030185 GGACGCATCCGAGATTAAGCTA 60.030 50.000 0.00 0.00 34.48 3.32
642 655 4.097437 TGCCTCGTAGTCGATAAGAACATT 59.903 41.667 0.00 0.00 45.21 2.71
666 679 5.105752 GTCTCTCGCACAAAGAATATGTCT 58.894 41.667 0.00 0.00 38.69 3.41
670 683 7.489435 TCTCTCGCACAAAGAATATGTCTAAAG 59.511 37.037 0.00 0.00 34.56 1.85
673 686 6.653320 TCGCACAAAGAATATGTCTAAAGGTT 59.347 34.615 0.00 0.00 34.56 3.50
712 1148 2.159014 TCAAGGTGTGCTTGTAGTCGTT 60.159 45.455 0.00 0.00 33.84 3.85
725 1161 1.508632 AGTCGTTGTTGGATGGTTCG 58.491 50.000 0.00 0.00 0.00 3.95
728 1164 1.209127 GTTGTTGGATGGTTCGCGG 59.791 57.895 6.13 0.00 0.00 6.46
772 1209 8.604890 GTTATTTCTGTGTTCCTTATACTGCTC 58.395 37.037 0.00 0.00 0.00 4.26
774 1211 5.584253 TCTGTGTTCCTTATACTGCTCTC 57.416 43.478 0.00 0.00 0.00 3.20
775 1212 4.402793 TCTGTGTTCCTTATACTGCTCTCC 59.597 45.833 0.00 0.00 0.00 3.71
777 1214 3.039011 TGTTCCTTATACTGCTCTCCCC 58.961 50.000 0.00 0.00 0.00 4.81
797 1234 7.557719 TCTCCCCTAATGAATTGATTGAAAGTC 59.442 37.037 0.00 0.00 0.00 3.01
798 1235 7.181361 TCCCCTAATGAATTGATTGAAAGTCA 58.819 34.615 0.00 0.00 38.39 3.41
935 1391 3.190439 AGGCCTCCCCACAATATATACC 58.810 50.000 0.00 0.00 35.39 2.73
941 1397 5.039645 CTCCCCACAATATATACCCCTCAT 58.960 45.833 0.00 0.00 0.00 2.90
944 1400 5.428253 CCCACAATATATACCCCTCATTCG 58.572 45.833 0.00 0.00 0.00 3.34
988 1444 2.670414 GAGCTCAAACTCACATTCTCCG 59.330 50.000 9.40 0.00 36.65 4.63
994 1467 0.966920 ACTCACATTCTCCGTTCGGT 59.033 50.000 11.04 0.00 0.00 4.69
1067 1541 3.118956 CCGGAGTATCAAAAGAGCTCACT 60.119 47.826 17.77 8.48 36.25 3.41
1069 1543 3.620821 GGAGTATCAAAAGAGCTCACTGC 59.379 47.826 17.77 10.04 38.56 4.40
1168 1642 2.927856 TCCTGCCAAAGCCTCCGA 60.928 61.111 0.00 0.00 38.69 4.55
1291 3060 1.227176 GACGCGGGTGAAGGGTATC 60.227 63.158 10.96 0.00 34.85 2.24
1326 3095 1.724582 GGCAACGCCTTGACAAGTGT 61.725 55.000 14.03 9.13 46.69 3.55
1328 3097 0.732571 CAACGCCTTGACAAGTGTGT 59.267 50.000 14.03 13.85 42.10 3.72
1329 3098 0.732571 AACGCCTTGACAAGTGTGTG 59.267 50.000 17.83 11.03 38.41 3.82
1330 3099 1.009675 CGCCTTGACAAGTGTGTGC 60.010 57.895 14.03 8.58 38.41 4.57
1331 3100 1.439353 CGCCTTGACAAGTGTGTGCT 61.439 55.000 14.03 0.00 38.41 4.40
1332 3101 0.740737 GCCTTGACAAGTGTGTGCTT 59.259 50.000 14.03 0.00 38.41 3.91
1335 3104 2.423185 CCTTGACAAGTGTGTGCTTCAA 59.577 45.455 14.03 0.00 38.41 2.69
1336 3105 3.067180 CCTTGACAAGTGTGTGCTTCAAT 59.933 43.478 14.03 0.00 38.41 2.57
1337 3106 4.275689 CCTTGACAAGTGTGTGCTTCAATA 59.724 41.667 14.03 0.00 38.41 1.90
1338 3107 5.048504 CCTTGACAAGTGTGTGCTTCAATAT 60.049 40.000 14.03 0.00 38.41 1.28
1339 3108 6.149308 CCTTGACAAGTGTGTGCTTCAATATA 59.851 38.462 14.03 0.00 38.41 0.86
1340 3109 7.308529 CCTTGACAAGTGTGTGCTTCAATATAA 60.309 37.037 14.03 0.00 38.41 0.98
1341 3110 7.503521 TGACAAGTGTGTGCTTCAATATAAA 57.496 32.000 0.00 0.00 38.41 1.40
1419 3402 3.000727 GTTGATCACGGTTTTCGAGGAT 58.999 45.455 0.00 0.00 42.43 3.24
1467 3450 2.433318 GTGTGCCTCGCTCCTGAC 60.433 66.667 0.00 0.00 0.00 3.51
1543 3534 1.417288 GGAGGGCAGAGATGATGGCT 61.417 60.000 0.00 0.00 42.51 4.75
1549 3540 0.035036 CAGAGATGATGGCTGCGGAT 59.965 55.000 0.00 0.00 0.00 4.18
1550 3541 0.035036 AGAGATGATGGCTGCGGATG 59.965 55.000 0.00 0.00 0.00 3.51
1551 3542 0.954449 GAGATGATGGCTGCGGATGG 60.954 60.000 0.00 0.00 0.00 3.51
1552 3543 1.071987 GATGATGGCTGCGGATGGA 59.928 57.895 0.00 0.00 0.00 3.41
1553 3544 0.954449 GATGATGGCTGCGGATGGAG 60.954 60.000 0.00 0.00 36.48 3.86
1559 3550 3.207669 CTGCGGATGGAGCTTGGC 61.208 66.667 0.00 0.00 35.28 4.52
1561 3552 4.838152 GCGGATGGAGCTTGGCGA 62.838 66.667 0.00 0.00 0.00 5.54
1562 3553 2.109799 CGGATGGAGCTTGGCGAT 59.890 61.111 0.00 0.00 0.00 4.58
1563 3554 2.249535 CGGATGGAGCTTGGCGATG 61.250 63.158 0.00 0.00 0.00 3.84
1564 3555 1.895707 GGATGGAGCTTGGCGATGG 60.896 63.158 0.00 0.00 0.00 3.51
1565 3556 1.146930 GATGGAGCTTGGCGATGGA 59.853 57.895 0.00 0.00 0.00 3.41
1566 3557 0.883814 GATGGAGCTTGGCGATGGAG 60.884 60.000 0.00 0.00 0.00 3.86
1567 3558 2.203126 GGAGCTTGGCGATGGAGG 60.203 66.667 0.00 0.00 0.00 4.30
1568 3559 2.586792 GAGCTTGGCGATGGAGGT 59.413 61.111 0.00 0.00 0.00 3.85
1569 3560 1.817099 GAGCTTGGCGATGGAGGTG 60.817 63.158 0.00 0.00 0.00 4.00
1570 3561 3.512516 GCTTGGCGATGGAGGTGC 61.513 66.667 0.00 0.00 0.00 5.01
1571 3562 3.197790 CTTGGCGATGGAGGTGCG 61.198 66.667 0.00 0.00 0.00 5.34
1572 3563 3.958147 CTTGGCGATGGAGGTGCGT 62.958 63.158 0.00 0.00 0.00 5.24
1573 3564 4.758251 TGGCGATGGAGGTGCGTG 62.758 66.667 0.00 0.00 0.00 5.34
1576 3567 4.457496 CGATGGAGGTGCGTGCCT 62.457 66.667 0.00 0.00 42.53 4.75
1587 3578 2.584418 CGTGCCTCGCTCCTGATG 60.584 66.667 0.00 0.00 0.00 3.07
1588 3579 2.894387 GTGCCTCGCTCCTGATGC 60.894 66.667 0.00 0.00 0.00 3.91
1589 3580 4.166888 TGCCTCGCTCCTGATGCC 62.167 66.667 0.00 0.00 0.00 4.40
1590 3581 4.925861 GCCTCGCTCCTGATGCCC 62.926 72.222 0.00 0.00 0.00 5.36
1591 3582 3.160047 CCTCGCTCCTGATGCCCT 61.160 66.667 0.00 0.00 0.00 5.19
1592 3583 2.420890 CTCGCTCCTGATGCCCTC 59.579 66.667 0.00 0.00 0.00 4.30
1593 3584 3.496875 CTCGCTCCTGATGCCCTCG 62.497 68.421 0.00 0.00 0.00 4.63
1595 3586 4.925861 GCTCCTGATGCCCTCGCC 62.926 72.222 0.00 0.00 0.00 5.54
1596 3587 4.598894 CTCCTGATGCCCTCGCCG 62.599 72.222 0.00 0.00 0.00 6.46
1598 3589 4.899239 CCTGATGCCCTCGCCGAC 62.899 72.222 0.00 0.00 0.00 4.79
1612 3603 3.827898 CGACGGAGGGTCTGGCTC 61.828 72.222 0.00 0.00 43.79 4.70
1613 3604 3.462678 GACGGAGGGTCTGGCTCC 61.463 72.222 0.00 0.00 42.62 4.70
1620 3611 4.021925 GGTCTGGCTCCCGTGCTT 62.022 66.667 0.00 0.00 0.00 3.91
1621 3612 2.032681 GTCTGGCTCCCGTGCTTT 59.967 61.111 0.00 0.00 0.00 3.51
1622 3613 1.295423 GTCTGGCTCCCGTGCTTTA 59.705 57.895 0.00 0.00 0.00 1.85
1623 3614 0.107654 GTCTGGCTCCCGTGCTTTAT 60.108 55.000 0.00 0.00 0.00 1.40
1624 3615 0.618458 TCTGGCTCCCGTGCTTTATT 59.382 50.000 0.00 0.00 0.00 1.40
1625 3616 1.004277 TCTGGCTCCCGTGCTTTATTT 59.996 47.619 0.00 0.00 0.00 1.40
1626 3617 1.818674 CTGGCTCCCGTGCTTTATTTT 59.181 47.619 0.00 0.00 0.00 1.82
1627 3618 1.816224 TGGCTCCCGTGCTTTATTTTC 59.184 47.619 0.00 0.00 0.00 2.29
1628 3619 2.092323 GGCTCCCGTGCTTTATTTTCT 58.908 47.619 0.00 0.00 0.00 2.52
1629 3620 2.492088 GGCTCCCGTGCTTTATTTTCTT 59.508 45.455 0.00 0.00 0.00 2.52
1630 3621 3.427638 GGCTCCCGTGCTTTATTTTCTTC 60.428 47.826 0.00 0.00 0.00 2.87
1631 3622 3.427638 GCTCCCGTGCTTTATTTTCTTCC 60.428 47.826 0.00 0.00 0.00 3.46
1632 3623 4.010349 CTCCCGTGCTTTATTTTCTTCCT 58.990 43.478 0.00 0.00 0.00 3.36
1633 3624 4.403734 TCCCGTGCTTTATTTTCTTCCTT 58.596 39.130 0.00 0.00 0.00 3.36
1634 3625 4.830600 TCCCGTGCTTTATTTTCTTCCTTT 59.169 37.500 0.00 0.00 0.00 3.11
1635 3626 5.303333 TCCCGTGCTTTATTTTCTTCCTTTT 59.697 36.000 0.00 0.00 0.00 2.27
1636 3627 5.633601 CCCGTGCTTTATTTTCTTCCTTTTC 59.366 40.000 0.00 0.00 0.00 2.29
1637 3628 6.212955 CCGTGCTTTATTTTCTTCCTTTTCA 58.787 36.000 0.00 0.00 0.00 2.69
1638 3629 6.868339 CCGTGCTTTATTTTCTTCCTTTTCAT 59.132 34.615 0.00 0.00 0.00 2.57
1639 3630 8.026607 CCGTGCTTTATTTTCTTCCTTTTCATA 58.973 33.333 0.00 0.00 0.00 2.15
1640 3631 9.573133 CGTGCTTTATTTTCTTCCTTTTCATAT 57.427 29.630 0.00 0.00 0.00 1.78
1647 3638 7.504924 TTTTCTTCCTTTTCATATGTCGTGT 57.495 32.000 1.90 0.00 0.00 4.49
1648 3639 6.721571 TTCTTCCTTTTCATATGTCGTGTC 57.278 37.500 1.90 0.00 0.00 3.67
1649 3640 6.037786 TCTTCCTTTTCATATGTCGTGTCT 57.962 37.500 1.90 0.00 0.00 3.41
1650 3641 5.869344 TCTTCCTTTTCATATGTCGTGTCTG 59.131 40.000 1.90 0.00 0.00 3.51
1651 3642 5.147330 TCCTTTTCATATGTCGTGTCTGT 57.853 39.130 1.90 0.00 0.00 3.41
1652 3643 4.929211 TCCTTTTCATATGTCGTGTCTGTG 59.071 41.667 1.90 0.00 0.00 3.66
1653 3644 4.436050 CCTTTTCATATGTCGTGTCTGTGC 60.436 45.833 1.90 0.00 0.00 4.57
1654 3645 3.592898 TTCATATGTCGTGTCTGTGCT 57.407 42.857 1.90 0.00 0.00 4.40
1655 3646 2.879826 TCATATGTCGTGTCTGTGCTG 58.120 47.619 1.90 0.00 0.00 4.41
1656 3647 2.231235 TCATATGTCGTGTCTGTGCTGT 59.769 45.455 1.90 0.00 0.00 4.40
1657 3648 3.442273 TCATATGTCGTGTCTGTGCTGTA 59.558 43.478 1.90 0.00 0.00 2.74
1658 3649 2.354109 ATGTCGTGTCTGTGCTGTAG 57.646 50.000 0.00 0.00 0.00 2.74
1659 3650 1.029681 TGTCGTGTCTGTGCTGTAGT 58.970 50.000 0.00 0.00 0.00 2.73
1660 3651 2.223745 TGTCGTGTCTGTGCTGTAGTA 58.776 47.619 0.00 0.00 0.00 1.82
1661 3652 2.619646 TGTCGTGTCTGTGCTGTAGTAA 59.380 45.455 0.00 0.00 0.00 2.24
1662 3653 3.254903 TGTCGTGTCTGTGCTGTAGTAAT 59.745 43.478 0.00 0.00 0.00 1.89
1663 3654 4.456566 TGTCGTGTCTGTGCTGTAGTAATA 59.543 41.667 0.00 0.00 0.00 0.98
1664 3655 5.048573 TGTCGTGTCTGTGCTGTAGTAATAA 60.049 40.000 0.00 0.00 0.00 1.40
1665 3656 6.034591 GTCGTGTCTGTGCTGTAGTAATAAT 58.965 40.000 0.00 0.00 0.00 1.28
1666 3657 6.530534 GTCGTGTCTGTGCTGTAGTAATAATT 59.469 38.462 0.00 0.00 0.00 1.40
1667 3658 6.750501 TCGTGTCTGTGCTGTAGTAATAATTC 59.249 38.462 0.00 0.00 0.00 2.17
1668 3659 6.752351 CGTGTCTGTGCTGTAGTAATAATTCT 59.248 38.462 0.00 0.00 0.00 2.40
1669 3660 7.253783 CGTGTCTGTGCTGTAGTAATAATTCTG 60.254 40.741 0.00 0.00 0.00 3.02
1670 3661 7.759886 GTGTCTGTGCTGTAGTAATAATTCTGA 59.240 37.037 0.00 0.00 0.00 3.27
1671 3662 8.478066 TGTCTGTGCTGTAGTAATAATTCTGAT 58.522 33.333 0.00 0.00 0.00 2.90
1672 3663 8.759641 GTCTGTGCTGTAGTAATAATTCTGATG 58.240 37.037 0.00 0.00 0.00 3.07
1673 3664 7.439356 TCTGTGCTGTAGTAATAATTCTGATGC 59.561 37.037 0.00 0.00 0.00 3.91
1674 3665 6.483307 TGTGCTGTAGTAATAATTCTGATGCC 59.517 38.462 0.00 0.00 0.00 4.40
1675 3666 5.997746 TGCTGTAGTAATAATTCTGATGCCC 59.002 40.000 0.00 0.00 0.00 5.36
1676 3667 5.997746 GCTGTAGTAATAATTCTGATGCCCA 59.002 40.000 0.00 0.00 0.00 5.36
1677 3668 6.148480 GCTGTAGTAATAATTCTGATGCCCAG 59.852 42.308 0.00 0.00 44.27 4.45
1678 3669 5.997746 TGTAGTAATAATTCTGATGCCCAGC 59.002 40.000 0.00 0.00 42.62 4.85
1679 3670 4.401925 AGTAATAATTCTGATGCCCAGCC 58.598 43.478 0.00 0.00 42.62 4.85
1680 3671 2.299326 ATAATTCTGATGCCCAGCCC 57.701 50.000 0.00 0.00 42.62 5.19
1681 3672 0.925558 TAATTCTGATGCCCAGCCCA 59.074 50.000 0.00 0.00 42.62 5.36
1682 3673 0.396695 AATTCTGATGCCCAGCCCAG 60.397 55.000 0.00 0.00 42.62 4.45
1683 3674 2.923634 ATTCTGATGCCCAGCCCAGC 62.924 60.000 0.00 0.00 42.62 4.85
1684 3675 4.435970 CTGATGCCCAGCCCAGCA 62.436 66.667 0.00 0.00 44.45 4.41
1687 3678 3.746436 ATGCCCAGCCCAGCATCA 61.746 61.111 0.00 0.00 46.58 3.07
1688 3679 3.733507 ATGCCCAGCCCAGCATCAG 62.734 63.158 0.00 0.00 46.58 2.90
1690 3681 3.736224 CCCAGCCCAGCATCAGGT 61.736 66.667 0.00 0.00 0.00 4.00
1691 3682 2.357836 CCAGCCCAGCATCAGGTT 59.642 61.111 0.00 0.00 0.00 3.50
1692 3683 2.050350 CCAGCCCAGCATCAGGTTG 61.050 63.158 0.00 0.00 34.40 3.77
1693 3684 2.362120 AGCCCAGCATCAGGTTGC 60.362 61.111 0.00 0.00 43.09 4.17
1694 3685 2.677524 GCCCAGCATCAGGTTGCA 60.678 61.111 5.26 0.00 45.23 4.08
1695 3686 2.998279 GCCCAGCATCAGGTTGCAC 61.998 63.158 5.26 0.00 45.23 4.57
1696 3687 1.303888 CCCAGCATCAGGTTGCACT 60.304 57.895 5.26 0.00 45.23 4.40
1697 3688 0.896940 CCCAGCATCAGGTTGCACTT 60.897 55.000 5.26 0.00 45.23 3.16
1698 3689 0.963962 CCAGCATCAGGTTGCACTTT 59.036 50.000 5.26 0.00 45.23 2.66
1699 3690 1.068055 CCAGCATCAGGTTGCACTTTC 60.068 52.381 5.26 0.00 45.23 2.62
1700 3691 0.877071 AGCATCAGGTTGCACTTTCG 59.123 50.000 5.26 0.00 45.23 3.46
1701 3692 0.874390 GCATCAGGTTGCACTTTCGA 59.126 50.000 0.00 0.00 42.31 3.71
1702 3693 1.135859 GCATCAGGTTGCACTTTCGAG 60.136 52.381 0.00 0.00 42.31 4.04
1703 3694 2.146342 CATCAGGTTGCACTTTCGAGT 58.854 47.619 0.00 0.00 0.00 4.18
1704 3695 1.865865 TCAGGTTGCACTTTCGAGTC 58.134 50.000 0.00 0.00 0.00 3.36
1705 3696 1.412710 TCAGGTTGCACTTTCGAGTCT 59.587 47.619 0.00 0.00 0.00 3.24
1706 3697 1.528586 CAGGTTGCACTTTCGAGTCTG 59.471 52.381 0.00 0.00 0.00 3.51
1707 3698 1.139058 AGGTTGCACTTTCGAGTCTGT 59.861 47.619 0.00 0.00 0.00 3.41
1708 3699 1.940613 GGTTGCACTTTCGAGTCTGTT 59.059 47.619 0.00 0.00 0.00 3.16
1709 3700 2.286418 GGTTGCACTTTCGAGTCTGTTG 60.286 50.000 0.00 0.00 0.00 3.33
1710 3701 2.309528 TGCACTTTCGAGTCTGTTGT 57.690 45.000 0.00 0.00 0.00 3.32
1711 3702 1.933181 TGCACTTTCGAGTCTGTTGTG 59.067 47.619 0.00 0.00 0.00 3.33
1712 3703 1.333258 GCACTTTCGAGTCTGTTGTGC 60.333 52.381 10.68 10.68 41.53 4.57
1713 3704 1.933181 CACTTTCGAGTCTGTTGTGCA 59.067 47.619 0.00 0.00 0.00 4.57
1714 3705 2.545526 CACTTTCGAGTCTGTTGTGCAT 59.454 45.455 0.00 0.00 0.00 3.96
1715 3706 3.740832 CACTTTCGAGTCTGTTGTGCATA 59.259 43.478 0.00 0.00 0.00 3.14
1716 3707 3.741344 ACTTTCGAGTCTGTTGTGCATAC 59.259 43.478 0.00 0.00 0.00 2.39
1717 3708 3.660501 TTCGAGTCTGTTGTGCATACT 57.339 42.857 0.00 0.00 37.26 2.12
1718 3709 4.776795 TTCGAGTCTGTTGTGCATACTA 57.223 40.909 0.00 0.00 35.10 1.82
1719 3710 4.776795 TCGAGTCTGTTGTGCATACTAA 57.223 40.909 0.00 0.00 35.10 2.24
1720 3711 5.128992 TCGAGTCTGTTGTGCATACTAAA 57.871 39.130 0.00 0.00 35.10 1.85
1721 3712 5.534407 TCGAGTCTGTTGTGCATACTAAAA 58.466 37.500 0.00 0.00 35.10 1.52
1722 3713 5.404366 TCGAGTCTGTTGTGCATACTAAAAC 59.596 40.000 0.00 0.00 35.10 2.43
1723 3714 5.176774 CGAGTCTGTTGTGCATACTAAAACA 59.823 40.000 0.00 0.00 35.10 2.83
1724 3715 6.292649 CGAGTCTGTTGTGCATACTAAAACAA 60.293 38.462 0.00 0.00 35.10 2.83
1725 3716 6.959361 AGTCTGTTGTGCATACTAAAACAAG 58.041 36.000 0.00 0.00 33.48 3.16
1726 3717 5.625311 GTCTGTTGTGCATACTAAAACAAGC 59.375 40.000 0.00 0.00 33.45 4.01
1727 3718 5.530915 TCTGTTGTGCATACTAAAACAAGCT 59.469 36.000 0.00 0.00 33.45 3.74
1728 3719 5.757886 TGTTGTGCATACTAAAACAAGCTC 58.242 37.500 0.00 0.00 33.45 4.09
1729 3720 4.661993 TGTGCATACTAAAACAAGCTCG 57.338 40.909 0.00 0.00 0.00 5.03
1730 3721 3.435327 TGTGCATACTAAAACAAGCTCGG 59.565 43.478 0.00 0.00 0.00 4.63
1731 3722 2.418628 TGCATACTAAAACAAGCTCGGC 59.581 45.455 0.00 0.00 0.00 5.54
1732 3723 2.536928 GCATACTAAAACAAGCTCGGCG 60.537 50.000 0.00 0.00 0.00 6.46
1733 3724 2.443887 TACTAAAACAAGCTCGGCGT 57.556 45.000 6.85 0.00 0.00 5.68
1734 3725 1.145803 ACTAAAACAAGCTCGGCGTC 58.854 50.000 6.85 0.00 0.00 5.19
1735 3726 1.144969 CTAAAACAAGCTCGGCGTCA 58.855 50.000 6.85 0.00 0.00 4.35
1736 3727 1.529438 CTAAAACAAGCTCGGCGTCAA 59.471 47.619 6.85 0.00 0.00 3.18
1737 3728 0.307760 AAAACAAGCTCGGCGTCAAG 59.692 50.000 6.85 0.00 0.00 3.02
1738 3729 0.814010 AAACAAGCTCGGCGTCAAGT 60.814 50.000 6.85 0.00 0.00 3.16
1739 3730 0.814010 AACAAGCTCGGCGTCAAGTT 60.814 50.000 6.85 4.29 0.00 2.66
1740 3731 0.814010 ACAAGCTCGGCGTCAAGTTT 60.814 50.000 6.85 0.00 0.00 2.66
1741 3732 0.110644 CAAGCTCGGCGTCAAGTTTC 60.111 55.000 6.85 0.00 0.00 2.78
1742 3733 1.557443 AAGCTCGGCGTCAAGTTTCG 61.557 55.000 6.85 0.00 0.00 3.46
1743 3734 2.019951 GCTCGGCGTCAAGTTTCGA 61.020 57.895 6.85 0.00 0.00 3.71
1744 3735 1.352156 GCTCGGCGTCAAGTTTCGAT 61.352 55.000 6.85 0.00 0.00 3.59
1745 3736 0.640768 CTCGGCGTCAAGTTTCGATC 59.359 55.000 6.85 0.00 0.00 3.69
1746 3737 0.038983 TCGGCGTCAAGTTTCGATCA 60.039 50.000 6.85 0.00 0.00 2.92
1747 3738 0.366871 CGGCGTCAAGTTTCGATCAG 59.633 55.000 0.00 0.00 0.00 2.90
1748 3739 1.429463 GGCGTCAAGTTTCGATCAGT 58.571 50.000 0.00 0.00 0.00 3.41
1749 3740 1.798813 GGCGTCAAGTTTCGATCAGTT 59.201 47.619 0.00 0.00 0.00 3.16
1750 3741 2.223377 GGCGTCAAGTTTCGATCAGTTT 59.777 45.455 0.00 0.00 0.00 2.66
1751 3742 3.218398 GCGTCAAGTTTCGATCAGTTTG 58.782 45.455 0.00 0.00 0.00 2.93
1752 3743 3.303132 GCGTCAAGTTTCGATCAGTTTGT 60.303 43.478 0.00 0.00 0.00 2.83
1753 3744 4.785341 GCGTCAAGTTTCGATCAGTTTGTT 60.785 41.667 0.00 0.00 0.00 2.83
1754 3745 4.666176 CGTCAAGTTTCGATCAGTTTGTTG 59.334 41.667 0.00 0.00 0.00 3.33
1755 3746 4.437820 GTCAAGTTTCGATCAGTTTGTTGC 59.562 41.667 0.00 0.00 0.00 4.17
1756 3747 4.335315 TCAAGTTTCGATCAGTTTGTTGCT 59.665 37.500 0.00 0.00 0.00 3.91
1757 3748 4.214980 AGTTTCGATCAGTTTGTTGCTG 57.785 40.909 0.00 0.00 35.43 4.41
1758 3749 3.627577 AGTTTCGATCAGTTTGTTGCTGT 59.372 39.130 0.00 0.00 35.60 4.40
1759 3750 4.814234 AGTTTCGATCAGTTTGTTGCTGTA 59.186 37.500 0.00 0.00 35.60 2.74
1760 3751 5.295787 AGTTTCGATCAGTTTGTTGCTGTAA 59.704 36.000 0.00 0.00 35.60 2.41
1761 3752 5.743026 TTCGATCAGTTTGTTGCTGTAAA 57.257 34.783 0.00 0.00 35.60 2.01
1762 3753 5.743026 TCGATCAGTTTGTTGCTGTAAAA 57.257 34.783 0.00 0.00 35.60 1.52
1763 3754 6.125327 TCGATCAGTTTGTTGCTGTAAAAA 57.875 33.333 0.00 0.00 35.60 1.94
1764 3755 6.198687 TCGATCAGTTTGTTGCTGTAAAAAG 58.801 36.000 0.00 0.00 35.60 2.27
1765 3756 5.971202 CGATCAGTTTGTTGCTGTAAAAAGT 59.029 36.000 0.00 0.00 35.60 2.66
1766 3757 7.011576 TCGATCAGTTTGTTGCTGTAAAAAGTA 59.988 33.333 0.00 0.00 35.60 2.24
1767 3758 7.642194 CGATCAGTTTGTTGCTGTAAAAAGTAA 59.358 33.333 0.00 0.00 35.60 2.24
1768 3759 9.296400 GATCAGTTTGTTGCTGTAAAAAGTAAA 57.704 29.630 0.00 0.00 35.60 2.01
1769 3760 9.646427 ATCAGTTTGTTGCTGTAAAAAGTAAAA 57.354 25.926 0.00 0.00 35.60 1.52
1770 3761 8.917655 TCAGTTTGTTGCTGTAAAAAGTAAAAC 58.082 29.630 0.00 0.00 35.60 2.43
1771 3762 8.704234 CAGTTTGTTGCTGTAAAAAGTAAAACA 58.296 29.630 0.00 0.00 0.00 2.83
1772 3763 8.705134 AGTTTGTTGCTGTAAAAAGTAAAACAC 58.295 29.630 0.00 0.00 0.00 3.32
1773 3764 6.856494 TGTTGCTGTAAAAAGTAAAACACG 57.144 33.333 0.00 0.00 0.00 4.49
1774 3765 6.380190 TGTTGCTGTAAAAAGTAAAACACGT 58.620 32.000 0.00 0.00 0.00 4.49
1775 3766 6.523893 TGTTGCTGTAAAAAGTAAAACACGTC 59.476 34.615 0.00 0.00 0.00 4.34
1776 3767 5.571277 TGCTGTAAAAAGTAAAACACGTCC 58.429 37.500 0.00 0.00 0.00 4.79
1777 3768 4.971830 GCTGTAAAAAGTAAAACACGTCCC 59.028 41.667 0.00 0.00 0.00 4.46
1778 3769 5.154215 TGTAAAAAGTAAAACACGTCCCG 57.846 39.130 0.00 0.00 0.00 5.14
1779 3770 3.696281 AAAAAGTAAAACACGTCCCGG 57.304 42.857 0.00 0.00 0.00 5.73
1780 3771 2.330440 AAAGTAAAACACGTCCCGGT 57.670 45.000 0.00 0.00 0.00 5.28
1781 3772 2.330440 AAGTAAAACACGTCCCGGTT 57.670 45.000 0.00 0.00 0.00 4.44
1782 3773 1.869774 AGTAAAACACGTCCCGGTTC 58.130 50.000 0.00 0.00 0.00 3.62
1783 3774 1.413812 AGTAAAACACGTCCCGGTTCT 59.586 47.619 0.00 0.00 0.00 3.01
1784 3775 1.794701 GTAAAACACGTCCCGGTTCTC 59.205 52.381 0.00 0.00 0.00 2.87
1785 3776 0.466963 AAAACACGTCCCGGTTCTCT 59.533 50.000 0.00 0.00 0.00 3.10
1786 3777 0.033090 AAACACGTCCCGGTTCTCTC 59.967 55.000 0.00 0.00 0.00 3.20
1787 3778 1.813728 AACACGTCCCGGTTCTCTCC 61.814 60.000 0.00 0.00 0.00 3.71
1788 3779 2.116772 ACGTCCCGGTTCTCTCCA 59.883 61.111 0.00 0.00 0.00 3.86
1789 3780 1.532316 ACGTCCCGGTTCTCTCCAA 60.532 57.895 0.00 0.00 0.00 3.53
1790 3781 1.080025 CGTCCCGGTTCTCTCCAAC 60.080 63.158 0.00 0.00 0.00 3.77
1791 3782 1.533469 CGTCCCGGTTCTCTCCAACT 61.533 60.000 0.00 0.00 0.00 3.16
1792 3783 0.685660 GTCCCGGTTCTCTCCAACTT 59.314 55.000 0.00 0.00 0.00 2.66
1793 3784 1.071857 GTCCCGGTTCTCTCCAACTTT 59.928 52.381 0.00 0.00 0.00 2.66
1794 3785 1.772453 TCCCGGTTCTCTCCAACTTTT 59.228 47.619 0.00 0.00 0.00 2.27
1795 3786 2.173996 TCCCGGTTCTCTCCAACTTTTT 59.826 45.455 0.00 0.00 0.00 1.94
1814 3805 4.445452 TTTTGAATCTGAATGCCTCTGC 57.555 40.909 0.00 0.00 38.26 4.26
1815 3806 3.361281 TTGAATCTGAATGCCTCTGCT 57.639 42.857 0.00 0.00 38.71 4.24
1816 3807 4.492494 TTGAATCTGAATGCCTCTGCTA 57.508 40.909 0.00 0.00 38.71 3.49
1817 3808 4.492494 TGAATCTGAATGCCTCTGCTAA 57.508 40.909 0.00 0.00 38.71 3.09
1818 3809 4.449131 TGAATCTGAATGCCTCTGCTAAG 58.551 43.478 0.00 0.00 38.71 2.18
1819 3810 4.162888 TGAATCTGAATGCCTCTGCTAAGA 59.837 41.667 0.00 0.00 38.71 2.10
1839 3830 3.575630 GAGTTTACTCGATGTGTCTGCA 58.424 45.455 0.00 0.00 32.78 4.41
1840 3831 4.177026 GAGTTTACTCGATGTGTCTGCAT 58.823 43.478 0.00 0.00 32.78 3.96
1841 3832 5.324784 AGTTTACTCGATGTGTCTGCATA 57.675 39.130 0.00 0.00 0.00 3.14
1842 3833 5.907207 AGTTTACTCGATGTGTCTGCATAT 58.093 37.500 0.00 0.00 0.00 1.78
1843 3834 6.341316 AGTTTACTCGATGTGTCTGCATATT 58.659 36.000 0.00 0.00 0.00 1.28
1844 3835 6.256539 AGTTTACTCGATGTGTCTGCATATTG 59.743 38.462 0.00 0.00 0.00 1.90
1845 3836 3.461061 ACTCGATGTGTCTGCATATTGG 58.539 45.455 0.00 0.00 31.05 3.16
1846 3837 2.212652 TCGATGTGTCTGCATATTGGC 58.787 47.619 0.00 0.00 31.05 4.52
1847 3838 1.265095 CGATGTGTCTGCATATTGGCC 59.735 52.381 0.00 0.00 0.00 5.36
1848 3839 1.265095 GATGTGTCTGCATATTGGCCG 59.735 52.381 0.00 0.00 0.00 6.13
1849 3840 0.747644 TGTGTCTGCATATTGGCCGG 60.748 55.000 0.00 0.00 0.00 6.13
1850 3841 0.463654 GTGTCTGCATATTGGCCGGA 60.464 55.000 5.05 0.00 0.00 5.14
1851 3842 0.254462 TGTCTGCATATTGGCCGGAA 59.746 50.000 5.05 0.00 0.00 4.30
1852 3843 0.947244 GTCTGCATATTGGCCGGAAG 59.053 55.000 5.05 0.00 0.00 3.46
1853 3844 0.836606 TCTGCATATTGGCCGGAAGA 59.163 50.000 5.05 0.00 0.00 2.87
1854 3845 1.211703 TCTGCATATTGGCCGGAAGAA 59.788 47.619 5.05 0.00 0.00 2.52
1855 3846 1.334869 CTGCATATTGGCCGGAAGAAC 59.665 52.381 5.05 0.00 0.00 3.01
1856 3847 1.340502 TGCATATTGGCCGGAAGAACA 60.341 47.619 5.05 0.00 0.00 3.18
1857 3848 1.748493 GCATATTGGCCGGAAGAACAA 59.252 47.619 5.05 1.62 0.00 2.83
1858 3849 2.165437 GCATATTGGCCGGAAGAACAAA 59.835 45.455 5.05 0.00 32.12 2.83
1859 3850 3.181476 GCATATTGGCCGGAAGAACAAAT 60.181 43.478 5.05 0.00 32.12 2.32
1860 3851 4.680440 GCATATTGGCCGGAAGAACAAATT 60.680 41.667 5.05 0.00 32.12 1.82
1861 3852 5.451242 GCATATTGGCCGGAAGAACAAATTA 60.451 40.000 5.05 0.00 32.12 1.40
1862 3853 6.568869 CATATTGGCCGGAAGAACAAATTAA 58.431 36.000 5.05 0.00 32.12 1.40
1863 3854 4.513198 TTGGCCGGAAGAACAAATTAAG 57.487 40.909 5.05 0.00 0.00 1.85
1864 3855 2.230266 TGGCCGGAAGAACAAATTAAGC 59.770 45.455 5.05 0.00 0.00 3.09
1865 3856 2.230266 GGCCGGAAGAACAAATTAAGCA 59.770 45.455 5.05 0.00 0.00 3.91
1866 3857 3.501950 GCCGGAAGAACAAATTAAGCAG 58.498 45.455 5.05 0.00 0.00 4.24
1867 3858 3.190535 GCCGGAAGAACAAATTAAGCAGA 59.809 43.478 5.05 0.00 0.00 4.26
1868 3859 4.320935 GCCGGAAGAACAAATTAAGCAGAA 60.321 41.667 5.05 0.00 0.00 3.02
1869 3860 5.768317 CCGGAAGAACAAATTAAGCAGAAA 58.232 37.500 0.00 0.00 0.00 2.52
1870 3861 6.212955 CCGGAAGAACAAATTAAGCAGAAAA 58.787 36.000 0.00 0.00 0.00 2.29
1871 3862 6.699642 CCGGAAGAACAAATTAAGCAGAAAAA 59.300 34.615 0.00 0.00 0.00 1.94
1872 3863 7.096065 CCGGAAGAACAAATTAAGCAGAAAAAG 60.096 37.037 0.00 0.00 0.00 2.27
1873 3864 7.647715 CGGAAGAACAAATTAAGCAGAAAAAGA 59.352 33.333 0.00 0.00 0.00 2.52
1874 3865 9.481340 GGAAGAACAAATTAAGCAGAAAAAGAT 57.519 29.630 0.00 0.00 0.00 2.40
1877 3868 9.688592 AGAACAAATTAAGCAGAAAAAGATGAG 57.311 29.630 0.00 0.00 0.00 2.90
1878 3869 9.468532 GAACAAATTAAGCAGAAAAAGATGAGT 57.531 29.630 0.00 0.00 0.00 3.41
1879 3870 9.822185 AACAAATTAAGCAGAAAAAGATGAGTT 57.178 25.926 0.00 0.00 0.00 3.01
1882 3873 9.631452 AAATTAAGCAGAAAAAGATGAGTTAGC 57.369 29.630 0.00 0.00 0.00 3.09
1883 3874 7.986085 TTAAGCAGAAAAAGATGAGTTAGCT 57.014 32.000 0.00 0.00 0.00 3.32
1884 3875 9.672673 ATTAAGCAGAAAAAGATGAGTTAGCTA 57.327 29.630 0.00 0.00 0.00 3.32
1885 3876 7.608308 AAGCAGAAAAAGATGAGTTAGCTAG 57.392 36.000 0.00 0.00 0.00 3.42
1886 3877 5.584251 AGCAGAAAAAGATGAGTTAGCTAGC 59.416 40.000 6.62 6.62 0.00 3.42
1887 3878 5.584251 GCAGAAAAAGATGAGTTAGCTAGCT 59.416 40.000 23.12 23.12 0.00 3.32
1888 3879 6.093357 GCAGAAAAAGATGAGTTAGCTAGCTT 59.907 38.462 24.88 4.46 0.00 3.74
1889 3880 7.361628 GCAGAAAAAGATGAGTTAGCTAGCTTT 60.362 37.037 24.88 9.24 0.00 3.51
1890 3881 8.174422 CAGAAAAAGATGAGTTAGCTAGCTTTC 58.826 37.037 24.88 17.89 0.00 2.62
1891 3882 7.880195 AGAAAAAGATGAGTTAGCTAGCTTTCA 59.120 33.333 24.88 22.54 0.00 2.69
1892 3883 8.572855 AAAAAGATGAGTTAGCTAGCTTTCAT 57.427 30.769 24.88 25.72 0.00 2.57
1893 3884 7.784633 AAAGATGAGTTAGCTAGCTTTCATC 57.215 36.000 32.95 32.95 37.40 2.92
1894 3885 5.852827 AGATGAGTTAGCTAGCTTTCATCC 58.147 41.667 34.35 25.51 37.60 3.51
1895 3886 5.602145 AGATGAGTTAGCTAGCTTTCATCCT 59.398 40.000 34.35 26.48 37.60 3.24
1896 3887 5.016051 TGAGTTAGCTAGCTTTCATCCTG 57.984 43.478 24.88 0.00 0.00 3.86
1897 3888 4.711846 TGAGTTAGCTAGCTTTCATCCTGA 59.288 41.667 24.88 0.00 0.00 3.86
1898 3889 5.365025 TGAGTTAGCTAGCTTTCATCCTGAT 59.635 40.000 24.88 0.00 0.00 2.90
1899 3890 5.609423 AGTTAGCTAGCTTTCATCCTGATG 58.391 41.667 24.88 0.55 40.09 3.07
1900 3891 5.130145 AGTTAGCTAGCTTTCATCCTGATGT 59.870 40.000 24.88 0.00 39.72 3.06
1901 3892 4.070630 AGCTAGCTTTCATCCTGATGTC 57.929 45.455 12.68 0.00 39.72 3.06
1902 3893 3.710677 AGCTAGCTTTCATCCTGATGTCT 59.289 43.478 12.68 3.99 39.72 3.41
1903 3894 3.808726 GCTAGCTTTCATCCTGATGTCTG 59.191 47.826 7.70 0.81 39.72 3.51
1904 3895 3.996921 AGCTTTCATCCTGATGTCTGT 57.003 42.857 7.00 0.00 39.72 3.41
1905 3896 3.607741 AGCTTTCATCCTGATGTCTGTG 58.392 45.455 7.00 0.00 39.72 3.66
1906 3897 3.262660 AGCTTTCATCCTGATGTCTGTGA 59.737 43.478 7.00 0.00 39.72 3.58
1907 3898 3.622163 GCTTTCATCCTGATGTCTGTGAG 59.378 47.826 7.00 0.48 39.72 3.51
1908 3899 4.622457 GCTTTCATCCTGATGTCTGTGAGA 60.622 45.833 7.00 0.00 39.72 3.27
1909 3900 4.732672 TTCATCCTGATGTCTGTGAGAG 57.267 45.455 7.00 0.00 39.72 3.20
1910 3901 3.029570 TCATCCTGATGTCTGTGAGAGG 58.970 50.000 7.00 0.00 39.72 3.69
1911 3902 2.907458 TCCTGATGTCTGTGAGAGGA 57.093 50.000 0.00 0.00 0.00 3.71
1912 3903 2.451490 TCCTGATGTCTGTGAGAGGAC 58.549 52.381 0.00 0.00 0.00 3.85
1913 3904 1.133982 CCTGATGTCTGTGAGAGGACG 59.866 57.143 0.00 0.00 35.45 4.79
1914 3905 2.087646 CTGATGTCTGTGAGAGGACGA 58.912 52.381 0.00 0.00 35.45 4.20
1915 3906 2.087646 TGATGTCTGTGAGAGGACGAG 58.912 52.381 0.00 0.00 35.45 4.18
1916 3907 2.088423 GATGTCTGTGAGAGGACGAGT 58.912 52.381 0.00 0.00 35.45 4.18
1917 3908 1.524848 TGTCTGTGAGAGGACGAGTC 58.475 55.000 0.00 0.00 35.45 3.36
1918 3909 1.072489 TGTCTGTGAGAGGACGAGTCT 59.928 52.381 3.09 0.00 35.45 3.24
1919 3910 1.735571 GTCTGTGAGAGGACGAGTCTC 59.264 57.143 3.09 0.00 40.87 3.36
1920 3911 1.091537 CTGTGAGAGGACGAGTCTCC 58.908 60.000 3.09 1.54 39.91 3.71
1921 3912 0.693622 TGTGAGAGGACGAGTCTCCT 59.306 55.000 9.99 9.99 44.00 3.69
1922 3913 1.091537 GTGAGAGGACGAGTCTCCTG 58.908 60.000 13.82 0.00 41.11 3.86
1923 3914 0.678366 TGAGAGGACGAGTCTCCTGC 60.678 60.000 13.82 7.91 41.11 4.85
1924 3915 0.678366 GAGAGGACGAGTCTCCTGCA 60.678 60.000 13.82 0.00 41.11 4.41
1925 3916 0.033601 AGAGGACGAGTCTCCTGCAT 60.034 55.000 13.82 0.88 41.11 3.96
1926 3917 0.102120 GAGGACGAGTCTCCTGCATG 59.898 60.000 13.82 0.00 41.11 4.06
1927 3918 1.520342 GGACGAGTCTCCTGCATGC 60.520 63.158 11.82 11.82 0.00 4.06
1928 3919 1.216444 GACGAGTCTCCTGCATGCA 59.784 57.895 21.29 21.29 0.00 3.96
1929 3920 0.179089 GACGAGTCTCCTGCATGCAT 60.179 55.000 22.97 4.56 0.00 3.96
1930 3921 1.067669 GACGAGTCTCCTGCATGCATA 59.932 52.381 22.97 11.76 0.00 3.14
1931 3922 1.068281 ACGAGTCTCCTGCATGCATAG 59.932 52.381 22.97 20.73 0.00 2.23
1932 3923 1.068281 CGAGTCTCCTGCATGCATAGT 59.932 52.381 22.97 9.99 0.00 2.12
1933 3924 2.753296 GAGTCTCCTGCATGCATAGTC 58.247 52.381 22.97 17.98 0.00 2.59
1934 3925 2.364970 GAGTCTCCTGCATGCATAGTCT 59.635 50.000 22.97 21.99 0.00 3.24
1935 3926 2.770802 AGTCTCCTGCATGCATAGTCTT 59.229 45.455 22.97 8.91 0.00 3.01
1936 3927 2.871022 GTCTCCTGCATGCATAGTCTTG 59.129 50.000 22.97 7.39 0.00 3.02
1937 3928 2.158856 TCTCCTGCATGCATAGTCTTGG 60.159 50.000 22.97 16.89 0.00 3.61
1938 3929 0.666913 CCTGCATGCATAGTCTTGGC 59.333 55.000 22.97 0.00 0.00 4.52
1939 3930 1.676746 CTGCATGCATAGTCTTGGCT 58.323 50.000 22.97 0.00 0.00 4.75
1940 3931 2.022195 CTGCATGCATAGTCTTGGCTT 58.978 47.619 22.97 0.00 0.00 4.35
1941 3932 1.746787 TGCATGCATAGTCTTGGCTTG 59.253 47.619 18.46 0.00 36.22 4.01
1942 3933 1.066605 GCATGCATAGTCTTGGCTTGG 59.933 52.381 14.21 0.00 34.42 3.61
1943 3934 1.066605 CATGCATAGTCTTGGCTTGGC 59.933 52.381 0.00 0.00 0.00 4.52
1944 3935 0.329261 TGCATAGTCTTGGCTTGGCT 59.671 50.000 0.00 0.00 0.00 4.75
1945 3936 0.737219 GCATAGTCTTGGCTTGGCTG 59.263 55.000 0.00 0.00 0.00 4.85
1946 3937 0.737219 CATAGTCTTGGCTTGGCTGC 59.263 55.000 0.00 0.00 0.00 5.25
1954 3945 4.085876 GCTTGGCTGCCTGAAGAA 57.914 55.556 21.03 4.14 0.00 2.52
1955 3946 1.881602 GCTTGGCTGCCTGAAGAAG 59.118 57.895 21.03 15.03 0.00 2.85
1956 3947 0.607489 GCTTGGCTGCCTGAAGAAGA 60.607 55.000 21.03 0.00 0.00 2.87
1957 3948 1.954258 GCTTGGCTGCCTGAAGAAGAT 60.954 52.381 21.03 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.065443 GGAAAAACGAGGTTACTGCATATTAGT 59.935 37.037 0.00 0.00 0.00 2.24
37 38 7.280205 AGGAAAAACGAGGTTACTGCATATTAG 59.720 37.037 0.00 0.00 0.00 1.73
38 39 7.107542 AGGAAAAACGAGGTTACTGCATATTA 58.892 34.615 0.00 0.00 0.00 0.98
42 43 3.751518 AGGAAAAACGAGGTTACTGCAT 58.248 40.909 0.00 0.00 0.00 3.96
54 58 6.640907 CCAAAGGAATACAAGAAGGAAAAACG 59.359 38.462 0.00 0.00 0.00 3.60
90 96 9.788960 CAAGGAATTCATATCATTATGCTGATG 57.211 33.333 7.93 0.00 36.55 3.07
95 101 9.622004 CAGTTCAAGGAATTCATATCATTATGC 57.378 33.333 7.93 0.00 36.03 3.14
120 126 6.951198 TCTGCCCAAAATAATAGAGGAAAACA 59.049 34.615 0.00 0.00 0.00 2.83
121 127 7.404671 TCTGCCCAAAATAATAGAGGAAAAC 57.595 36.000 0.00 0.00 0.00 2.43
124 130 7.182060 AGTTTCTGCCCAAAATAATAGAGGAA 58.818 34.615 0.00 0.00 0.00 3.36
129 135 6.340522 CCCAAGTTTCTGCCCAAAATAATAG 58.659 40.000 0.00 0.00 0.00 1.73
130 136 5.188751 CCCCAAGTTTCTGCCCAAAATAATA 59.811 40.000 0.00 0.00 0.00 0.98
132 138 3.326297 CCCCAAGTTTCTGCCCAAAATAA 59.674 43.478 0.00 0.00 0.00 1.40
134 140 1.699083 CCCCAAGTTTCTGCCCAAAAT 59.301 47.619 0.00 0.00 0.00 1.82
135 141 1.127343 CCCCAAGTTTCTGCCCAAAA 58.873 50.000 0.00 0.00 0.00 2.44
139 145 0.900182 CCTTCCCCAAGTTTCTGCCC 60.900 60.000 0.00 0.00 0.00 5.36
204 210 2.045926 ACACCAGGAGCGAATGCC 60.046 61.111 0.00 0.00 44.31 4.40
261 267 3.118482 GCAGATTCTGGAGGATGTTGAGA 60.118 47.826 15.28 0.00 31.21 3.27
300 306 2.030027 TGAACTCCACCACATCTCCT 57.970 50.000 0.00 0.00 0.00 3.69
324 330 3.588906 TCGACCGTGTCACGCTGT 61.589 61.111 20.01 13.08 40.91 4.40
412 418 1.739562 CTGCTTCGGTCCTGACTGC 60.740 63.158 1.09 0.93 37.60 4.40
447 456 2.169832 AAGATCAACGACCACTGTGG 57.830 50.000 24.80 24.80 45.02 4.17
551 564 4.814234 ACAAATACCACATAGCACATACCG 59.186 41.667 0.00 0.00 0.00 4.02
593 606 2.141535 AGCTTAATCTCGGATGCGTC 57.858 50.000 6.49 0.00 0.00 5.19
602 615 4.320641 CGAGGCACCTACTAGCTTAATCTC 60.321 50.000 0.00 0.00 0.00 2.75
613 626 0.251354 TCGACTACGAGGCACCTACT 59.749 55.000 0.00 0.00 43.81 2.57
642 655 4.820897 ACATATTCTTTGTGCGAGAGACA 58.179 39.130 0.00 0.00 0.00 3.41
712 1148 1.669760 GTCCGCGAACCATCCAACA 60.670 57.895 8.23 0.00 0.00 3.33
725 1161 6.704512 AACAAAAATTACATTCATGTCCGC 57.295 33.333 0.00 0.00 41.97 5.54
772 1209 7.340232 TGACTTTCAATCAATTCATTAGGGGAG 59.660 37.037 0.00 0.00 0.00 4.30
774 1211 7.260603 GTGACTTTCAATCAATTCATTAGGGG 58.739 38.462 0.00 0.00 0.00 4.79
775 1212 7.123247 AGGTGACTTTCAATCAATTCATTAGGG 59.877 37.037 0.00 0.00 37.44 3.53
809 1246 0.912486 CCTATATACCCCAGCCCTGC 59.088 60.000 0.00 0.00 0.00 4.85
810 1247 0.912486 GCCTATATACCCCAGCCCTG 59.088 60.000 0.00 0.00 0.00 4.45
881 1331 1.154150 GTGACAAAGCATGCCTCGC 60.154 57.895 15.66 7.05 0.00 5.03
894 1344 2.481289 TTATTCGCCCATGTGTGACA 57.519 45.000 0.00 0.00 0.00 3.58
935 1391 0.036164 TGTGTGGGTTCGAATGAGGG 59.964 55.000 0.00 0.00 0.00 4.30
941 1397 1.155424 GCGTCTTGTGTGGGTTCGAA 61.155 55.000 0.00 0.00 0.00 3.71
944 1400 1.647084 GTGCGTCTTGTGTGGGTTC 59.353 57.895 0.00 0.00 0.00 3.62
988 1444 2.348666 CGTCTTCCATTGATCACCGAAC 59.651 50.000 0.00 0.00 0.00 3.95
994 1467 0.461870 CCGCCGTCTTCCATTGATCA 60.462 55.000 0.00 0.00 0.00 2.92
1291 3060 2.595463 CCCATGTATGCCTGCGGG 60.595 66.667 7.41 7.41 0.00 6.13
1326 3095 4.670478 CGTTGCCGTTTATATTGAAGCACA 60.670 41.667 0.00 0.00 0.00 4.57
1328 3097 3.685272 TCGTTGCCGTTTATATTGAAGCA 59.315 39.130 0.00 0.00 35.01 3.91
1329 3098 4.026407 GTCGTTGCCGTTTATATTGAAGC 58.974 43.478 0.00 0.00 35.01 3.86
1330 3099 5.464965 AGTCGTTGCCGTTTATATTGAAG 57.535 39.130 0.00 0.00 35.01 3.02
1331 3100 5.866335 AAGTCGTTGCCGTTTATATTGAA 57.134 34.783 0.00 0.00 35.01 2.69
1332 3101 5.391097 CCAAAGTCGTTGCCGTTTATATTGA 60.391 40.000 0.00 0.00 35.74 2.57
1335 3104 3.375922 CCCAAAGTCGTTGCCGTTTATAT 59.624 43.478 0.00 0.00 35.74 0.86
1336 3105 2.743126 CCCAAAGTCGTTGCCGTTTATA 59.257 45.455 0.00 0.00 35.74 0.98
1337 3106 1.538075 CCCAAAGTCGTTGCCGTTTAT 59.462 47.619 0.00 0.00 35.74 1.40
1338 3107 0.945813 CCCAAAGTCGTTGCCGTTTA 59.054 50.000 0.00 0.00 35.74 2.01
1339 3108 1.033202 ACCCAAAGTCGTTGCCGTTT 61.033 50.000 0.00 0.00 35.74 3.60
1340 3109 1.452470 ACCCAAAGTCGTTGCCGTT 60.452 52.632 0.00 0.00 35.74 4.44
1341 3110 2.184167 CACCCAAAGTCGTTGCCGT 61.184 57.895 0.00 0.00 35.74 5.68
1467 3450 4.421479 ACGAGCCTGGCGAGAACG 62.421 66.667 20.13 18.70 42.93 3.95
1549 3540 2.586245 CTCCATCGCCAAGCTCCA 59.414 61.111 0.00 0.00 0.00 3.86
1550 3541 2.203126 CCTCCATCGCCAAGCTCC 60.203 66.667 0.00 0.00 0.00 4.70
1551 3542 1.817099 CACCTCCATCGCCAAGCTC 60.817 63.158 0.00 0.00 0.00 4.09
1552 3543 2.270205 CACCTCCATCGCCAAGCT 59.730 61.111 0.00 0.00 0.00 3.74
1553 3544 3.512516 GCACCTCCATCGCCAAGC 61.513 66.667 0.00 0.00 0.00 4.01
1554 3545 3.197790 CGCACCTCCATCGCCAAG 61.198 66.667 0.00 0.00 0.00 3.61
1555 3546 4.015406 ACGCACCTCCATCGCCAA 62.015 61.111 0.00 0.00 0.00 4.52
1556 3547 4.758251 CACGCACCTCCATCGCCA 62.758 66.667 0.00 0.00 0.00 5.69
1559 3550 4.457496 AGGCACGCACCTCCATCG 62.457 66.667 0.00 0.00 33.62 3.84
1570 3561 2.584418 CATCAGGAGCGAGGCACG 60.584 66.667 0.00 0.00 45.66 5.34
1571 3562 2.894387 GCATCAGGAGCGAGGCAC 60.894 66.667 0.00 0.00 42.15 5.01
1572 3563 4.166888 GGCATCAGGAGCGAGGCA 62.167 66.667 0.00 0.00 44.30 4.75
1573 3564 4.925861 GGGCATCAGGAGCGAGGC 62.926 72.222 0.00 0.00 41.85 4.70
1574 3565 3.160047 AGGGCATCAGGAGCGAGG 61.160 66.667 0.00 0.00 0.00 4.63
1575 3566 2.420890 GAGGGCATCAGGAGCGAG 59.579 66.667 0.00 0.00 0.00 5.03
1576 3567 3.531207 CGAGGGCATCAGGAGCGA 61.531 66.667 0.00 0.00 0.00 4.93
1578 3569 4.925861 GGCGAGGGCATCAGGAGC 62.926 72.222 0.00 0.00 42.47 4.70
1579 3570 4.598894 CGGCGAGGGCATCAGGAG 62.599 72.222 0.00 0.00 42.47 3.69
1581 3572 4.899239 GTCGGCGAGGGCATCAGG 62.899 72.222 11.20 0.00 42.47 3.86
1595 3586 3.827898 GAGCCAGACCCTCCGTCG 61.828 72.222 0.00 0.00 46.92 5.12
1596 3587 3.462678 GGAGCCAGACCCTCCGTC 61.463 72.222 0.00 0.00 39.50 4.79
1600 3591 3.775654 CACGGGAGCCAGACCCTC 61.776 72.222 0.00 0.00 44.72 4.30
1603 3594 2.180159 TAAAGCACGGGAGCCAGACC 62.180 60.000 0.00 0.00 34.23 3.85
1604 3595 0.107654 ATAAAGCACGGGAGCCAGAC 60.108 55.000 0.00 0.00 34.23 3.51
1605 3596 0.618458 AATAAAGCACGGGAGCCAGA 59.382 50.000 0.00 0.00 34.23 3.86
1606 3597 1.463674 AAATAAAGCACGGGAGCCAG 58.536 50.000 0.00 0.00 34.23 4.85
1607 3598 1.816224 GAAAATAAAGCACGGGAGCCA 59.184 47.619 0.00 0.00 34.23 4.75
1608 3599 2.092323 AGAAAATAAAGCACGGGAGCC 58.908 47.619 0.00 0.00 34.23 4.70
1609 3600 3.427638 GGAAGAAAATAAAGCACGGGAGC 60.428 47.826 0.00 0.00 0.00 4.70
1610 3601 4.010349 AGGAAGAAAATAAAGCACGGGAG 58.990 43.478 0.00 0.00 0.00 4.30
1611 3602 4.028993 AGGAAGAAAATAAAGCACGGGA 57.971 40.909 0.00 0.00 0.00 5.14
1612 3603 4.783764 AAGGAAGAAAATAAAGCACGGG 57.216 40.909 0.00 0.00 0.00 5.28
1613 3604 6.212955 TGAAAAGGAAGAAAATAAAGCACGG 58.787 36.000 0.00 0.00 0.00 4.94
1614 3605 7.873739 ATGAAAAGGAAGAAAATAAAGCACG 57.126 32.000 0.00 0.00 0.00 5.34
1621 3612 9.226606 ACACGACATATGAAAAGGAAGAAAATA 57.773 29.630 10.38 0.00 0.00 1.40
1622 3613 8.110860 ACACGACATATGAAAAGGAAGAAAAT 57.889 30.769 10.38 0.00 0.00 1.82
1623 3614 7.444183 AGACACGACATATGAAAAGGAAGAAAA 59.556 33.333 10.38 0.00 0.00 2.29
1624 3615 6.934645 AGACACGACATATGAAAAGGAAGAAA 59.065 34.615 10.38 0.00 0.00 2.52
1625 3616 6.368791 CAGACACGACATATGAAAAGGAAGAA 59.631 38.462 10.38 0.00 0.00 2.52
1626 3617 5.869344 CAGACACGACATATGAAAAGGAAGA 59.131 40.000 10.38 0.00 0.00 2.87
1627 3618 5.639506 ACAGACACGACATATGAAAAGGAAG 59.360 40.000 10.38 0.00 0.00 3.46
1628 3619 5.408299 CACAGACACGACATATGAAAAGGAA 59.592 40.000 10.38 0.00 0.00 3.36
1629 3620 4.929211 CACAGACACGACATATGAAAAGGA 59.071 41.667 10.38 0.00 0.00 3.36
1630 3621 4.436050 GCACAGACACGACATATGAAAAGG 60.436 45.833 10.38 0.00 0.00 3.11
1631 3622 4.389992 AGCACAGACACGACATATGAAAAG 59.610 41.667 10.38 0.09 0.00 2.27
1632 3623 4.152223 CAGCACAGACACGACATATGAAAA 59.848 41.667 10.38 0.00 0.00 2.29
1633 3624 3.679502 CAGCACAGACACGACATATGAAA 59.320 43.478 10.38 0.00 0.00 2.69
1634 3625 3.253230 CAGCACAGACACGACATATGAA 58.747 45.455 10.38 0.00 0.00 2.57
1635 3626 2.231235 ACAGCACAGACACGACATATGA 59.769 45.455 10.38 0.00 0.00 2.15
1636 3627 2.610433 ACAGCACAGACACGACATATG 58.390 47.619 0.00 0.00 0.00 1.78
1637 3628 3.444034 ACTACAGCACAGACACGACATAT 59.556 43.478 0.00 0.00 0.00 1.78
1638 3629 2.817844 ACTACAGCACAGACACGACATA 59.182 45.455 0.00 0.00 0.00 2.29
1639 3630 1.613925 ACTACAGCACAGACACGACAT 59.386 47.619 0.00 0.00 0.00 3.06
1640 3631 1.029681 ACTACAGCACAGACACGACA 58.970 50.000 0.00 0.00 0.00 4.35
1641 3632 2.983402 TACTACAGCACAGACACGAC 57.017 50.000 0.00 0.00 0.00 4.34
1642 3633 5.632244 TTATTACTACAGCACAGACACGA 57.368 39.130 0.00 0.00 0.00 4.35
1643 3634 6.752351 AGAATTATTACTACAGCACAGACACG 59.248 38.462 0.00 0.00 0.00 4.49
1644 3635 7.759886 TCAGAATTATTACTACAGCACAGACAC 59.240 37.037 0.00 0.00 0.00 3.67
1645 3636 7.836842 TCAGAATTATTACTACAGCACAGACA 58.163 34.615 0.00 0.00 0.00 3.41
1646 3637 8.759641 CATCAGAATTATTACTACAGCACAGAC 58.240 37.037 0.00 0.00 0.00 3.51
1647 3638 7.439356 GCATCAGAATTATTACTACAGCACAGA 59.561 37.037 0.00 0.00 0.00 3.41
1648 3639 7.307632 GGCATCAGAATTATTACTACAGCACAG 60.308 40.741 0.00 0.00 0.00 3.66
1649 3640 6.483307 GGCATCAGAATTATTACTACAGCACA 59.517 38.462 0.00 0.00 0.00 4.57
1650 3641 6.073003 GGGCATCAGAATTATTACTACAGCAC 60.073 42.308 0.00 0.00 0.00 4.40
1651 3642 5.997746 GGGCATCAGAATTATTACTACAGCA 59.002 40.000 0.00 0.00 0.00 4.41
1652 3643 5.997746 TGGGCATCAGAATTATTACTACAGC 59.002 40.000 0.00 0.00 0.00 4.40
1653 3644 6.148480 GCTGGGCATCAGAATTATTACTACAG 59.852 42.308 10.03 0.00 46.18 2.74
1654 3645 5.997746 GCTGGGCATCAGAATTATTACTACA 59.002 40.000 10.03 0.00 46.18 2.74
1655 3646 5.412904 GGCTGGGCATCAGAATTATTACTAC 59.587 44.000 10.03 0.00 46.18 2.73
1656 3647 5.514834 GGGCTGGGCATCAGAATTATTACTA 60.515 44.000 10.03 0.00 46.18 1.82
1657 3648 4.401925 GGCTGGGCATCAGAATTATTACT 58.598 43.478 10.03 0.00 46.18 2.24
1658 3649 3.507622 GGGCTGGGCATCAGAATTATTAC 59.492 47.826 10.03 0.00 46.18 1.89
1659 3650 3.139957 TGGGCTGGGCATCAGAATTATTA 59.860 43.478 10.03 0.00 46.18 0.98
1660 3651 2.091166 TGGGCTGGGCATCAGAATTATT 60.091 45.455 10.03 0.00 46.18 1.40
1661 3652 1.500303 TGGGCTGGGCATCAGAATTAT 59.500 47.619 10.03 0.00 46.18 1.28
1662 3653 0.925558 TGGGCTGGGCATCAGAATTA 59.074 50.000 10.03 0.00 46.18 1.40
1663 3654 0.396695 CTGGGCTGGGCATCAGAATT 60.397 55.000 10.03 0.00 46.18 2.17
1664 3655 1.229359 CTGGGCTGGGCATCAGAAT 59.771 57.895 10.03 0.00 46.18 2.40
1665 3656 2.679092 CTGGGCTGGGCATCAGAA 59.321 61.111 10.03 0.00 46.18 3.02
1666 3657 4.119363 GCTGGGCTGGGCATCAGA 62.119 66.667 10.03 0.00 46.18 3.27
1667 3658 3.733507 ATGCTGGGCTGGGCATCAG 62.734 63.158 6.56 2.37 44.58 2.90
1668 3659 3.746436 ATGCTGGGCTGGGCATCA 61.746 61.111 6.56 0.00 44.58 3.07
1671 3662 4.435970 CTGATGCTGGGCTGGGCA 62.436 66.667 0.00 0.00 42.80 5.36
1673 3664 3.292481 AACCTGATGCTGGGCTGGG 62.292 63.158 0.00 0.00 0.00 4.45
1674 3665 2.050350 CAACCTGATGCTGGGCTGG 61.050 63.158 0.00 0.00 0.00 4.85
1675 3666 2.707849 GCAACCTGATGCTGGGCTG 61.708 63.158 0.00 0.00 43.06 4.85
1676 3667 2.362120 GCAACCTGATGCTGGGCT 60.362 61.111 0.00 0.00 43.06 5.19
1677 3668 2.677524 TGCAACCTGATGCTGGGC 60.678 61.111 1.09 0.00 46.54 5.36
1678 3669 0.896940 AAGTGCAACCTGATGCTGGG 60.897 55.000 0.00 0.00 46.54 4.45
1679 3670 0.963962 AAAGTGCAACCTGATGCTGG 59.036 50.000 0.00 0.00 46.54 4.85
1680 3671 1.400629 CGAAAGTGCAACCTGATGCTG 60.401 52.381 0.00 0.00 46.54 4.41
1681 3672 0.877071 CGAAAGTGCAACCTGATGCT 59.123 50.000 0.00 0.00 46.54 3.79
1682 3673 0.874390 TCGAAAGTGCAACCTGATGC 59.126 50.000 0.00 0.00 46.58 3.91
1683 3674 2.146342 ACTCGAAAGTGCAACCTGATG 58.854 47.619 0.00 0.00 37.80 3.07
1684 3675 2.037772 AGACTCGAAAGTGCAACCTGAT 59.962 45.455 0.00 0.00 37.80 2.90
1685 3676 1.412710 AGACTCGAAAGTGCAACCTGA 59.587 47.619 0.00 0.00 37.80 3.86
1686 3677 1.528586 CAGACTCGAAAGTGCAACCTG 59.471 52.381 0.00 0.00 37.80 4.00
1687 3678 1.139058 ACAGACTCGAAAGTGCAACCT 59.861 47.619 0.00 0.00 37.80 3.50
1688 3679 1.583054 ACAGACTCGAAAGTGCAACC 58.417 50.000 0.00 0.00 37.80 3.77
1689 3680 2.351726 ACAACAGACTCGAAAGTGCAAC 59.648 45.455 0.00 0.00 35.28 4.17
1690 3681 2.351418 CACAACAGACTCGAAAGTGCAA 59.649 45.455 0.00 0.00 35.28 4.08
1691 3682 1.933181 CACAACAGACTCGAAAGTGCA 59.067 47.619 0.00 0.00 35.28 4.57
1692 3683 1.333258 GCACAACAGACTCGAAAGTGC 60.333 52.381 0.00 0.00 43.08 4.40
1693 3684 1.933181 TGCACAACAGACTCGAAAGTG 59.067 47.619 0.00 0.00 35.28 3.16
1694 3685 2.309528 TGCACAACAGACTCGAAAGT 57.690 45.000 0.00 0.00 38.88 2.66
1695 3686 4.313522 GTATGCACAACAGACTCGAAAG 57.686 45.455 0.00 0.00 37.52 2.62
1702 3693 5.625311 GCTTGTTTTAGTATGCACAACAGAC 59.375 40.000 0.00 0.00 40.95 3.51
1703 3694 5.530915 AGCTTGTTTTAGTATGCACAACAGA 59.469 36.000 0.00 0.00 0.00 3.41
1704 3695 5.762045 AGCTTGTTTTAGTATGCACAACAG 58.238 37.500 0.00 0.00 0.00 3.16
1705 3696 5.559991 CGAGCTTGTTTTAGTATGCACAACA 60.560 40.000 0.00 0.00 0.00 3.33
1706 3697 4.846137 CGAGCTTGTTTTAGTATGCACAAC 59.154 41.667 0.00 0.00 0.00 3.32
1707 3698 4.083537 CCGAGCTTGTTTTAGTATGCACAA 60.084 41.667 0.00 0.00 0.00 3.33
1708 3699 3.435327 CCGAGCTTGTTTTAGTATGCACA 59.565 43.478 0.00 0.00 0.00 4.57
1709 3700 3.727970 GCCGAGCTTGTTTTAGTATGCAC 60.728 47.826 0.00 0.00 0.00 4.57
1710 3701 2.418628 GCCGAGCTTGTTTTAGTATGCA 59.581 45.455 0.00 0.00 0.00 3.96
1711 3702 2.536928 CGCCGAGCTTGTTTTAGTATGC 60.537 50.000 0.00 0.00 0.00 3.14
1712 3703 2.671396 ACGCCGAGCTTGTTTTAGTATG 59.329 45.455 0.00 0.00 0.00 2.39
1713 3704 2.928116 GACGCCGAGCTTGTTTTAGTAT 59.072 45.455 0.00 0.00 0.00 2.12
1714 3705 2.288334 TGACGCCGAGCTTGTTTTAGTA 60.288 45.455 0.00 0.00 0.00 1.82
1715 3706 1.145803 GACGCCGAGCTTGTTTTAGT 58.854 50.000 0.00 0.00 0.00 2.24
1716 3707 1.144969 TGACGCCGAGCTTGTTTTAG 58.855 50.000 0.00 0.00 0.00 1.85
1717 3708 1.529438 CTTGACGCCGAGCTTGTTTTA 59.471 47.619 0.00 0.00 0.00 1.52
1718 3709 0.307760 CTTGACGCCGAGCTTGTTTT 59.692 50.000 0.00 0.00 0.00 2.43
1719 3710 0.814010 ACTTGACGCCGAGCTTGTTT 60.814 50.000 0.00 0.00 0.00 2.83
1720 3711 0.814010 AACTTGACGCCGAGCTTGTT 60.814 50.000 0.00 0.00 0.00 2.83
1721 3712 0.814010 AAACTTGACGCCGAGCTTGT 60.814 50.000 0.00 0.00 0.00 3.16
1722 3713 0.110644 GAAACTTGACGCCGAGCTTG 60.111 55.000 0.00 0.00 0.00 4.01
1723 3714 1.557443 CGAAACTTGACGCCGAGCTT 61.557 55.000 0.00 0.00 0.00 3.74
1724 3715 2.022129 CGAAACTTGACGCCGAGCT 61.022 57.895 0.00 0.00 0.00 4.09
1725 3716 1.352156 ATCGAAACTTGACGCCGAGC 61.352 55.000 0.00 0.00 32.60 5.03
1726 3717 0.640768 GATCGAAACTTGACGCCGAG 59.359 55.000 0.00 0.00 32.60 4.63
1727 3718 0.038983 TGATCGAAACTTGACGCCGA 60.039 50.000 0.00 0.00 0.00 5.54
1728 3719 0.366871 CTGATCGAAACTTGACGCCG 59.633 55.000 0.00 0.00 0.00 6.46
1729 3720 1.429463 ACTGATCGAAACTTGACGCC 58.571 50.000 0.00 0.00 0.00 5.68
1730 3721 3.218398 CAAACTGATCGAAACTTGACGC 58.782 45.455 0.00 0.00 0.00 5.19
1731 3722 4.452890 ACAAACTGATCGAAACTTGACG 57.547 40.909 0.00 0.00 0.00 4.35
1732 3723 4.437820 GCAACAAACTGATCGAAACTTGAC 59.562 41.667 0.00 0.00 0.00 3.18
1733 3724 4.335315 AGCAACAAACTGATCGAAACTTGA 59.665 37.500 0.00 0.00 0.00 3.02
1734 3725 4.438797 CAGCAACAAACTGATCGAAACTTG 59.561 41.667 0.00 0.00 37.32 3.16
1735 3726 4.096382 ACAGCAACAAACTGATCGAAACTT 59.904 37.500 0.00 0.00 38.55 2.66
1736 3727 3.627577 ACAGCAACAAACTGATCGAAACT 59.372 39.130 0.00 0.00 38.55 2.66
1737 3728 3.952535 ACAGCAACAAACTGATCGAAAC 58.047 40.909 0.00 0.00 38.55 2.78
1738 3729 5.743026 TTACAGCAACAAACTGATCGAAA 57.257 34.783 0.00 0.00 38.55 3.46
1739 3730 5.743026 TTTACAGCAACAAACTGATCGAA 57.257 34.783 0.00 0.00 38.55 3.71
1740 3731 5.743026 TTTTACAGCAACAAACTGATCGA 57.257 34.783 0.00 0.00 38.55 3.59
1741 3732 5.971202 ACTTTTTACAGCAACAAACTGATCG 59.029 36.000 0.00 0.00 38.55 3.69
1742 3733 8.850454 TTACTTTTTACAGCAACAAACTGATC 57.150 30.769 0.00 0.00 38.55 2.92
1743 3734 9.646427 TTTTACTTTTTACAGCAACAAACTGAT 57.354 25.926 0.00 0.00 38.55 2.90
1744 3735 8.917655 GTTTTACTTTTTACAGCAACAAACTGA 58.082 29.630 0.00 0.00 38.55 3.41
1745 3736 8.704234 TGTTTTACTTTTTACAGCAACAAACTG 58.296 29.630 0.00 0.00 41.08 3.16
1746 3737 8.705134 GTGTTTTACTTTTTACAGCAACAAACT 58.295 29.630 0.00 0.00 0.00 2.66
1747 3738 7.680842 CGTGTTTTACTTTTTACAGCAACAAAC 59.319 33.333 0.00 0.00 0.00 2.93
1748 3739 7.381678 ACGTGTTTTACTTTTTACAGCAACAAA 59.618 29.630 0.00 0.00 0.00 2.83
1749 3740 6.862090 ACGTGTTTTACTTTTTACAGCAACAA 59.138 30.769 0.00 0.00 0.00 2.83
1750 3741 6.380190 ACGTGTTTTACTTTTTACAGCAACA 58.620 32.000 0.00 0.00 0.00 3.33
1751 3742 6.021232 GGACGTGTTTTACTTTTTACAGCAAC 60.021 38.462 0.00 0.00 0.00 4.17
1752 3743 6.028987 GGACGTGTTTTACTTTTTACAGCAA 58.971 36.000 0.00 0.00 0.00 3.91
1753 3744 5.448904 GGGACGTGTTTTACTTTTTACAGCA 60.449 40.000 0.00 0.00 0.00 4.41
1754 3745 4.971830 GGGACGTGTTTTACTTTTTACAGC 59.028 41.667 0.00 0.00 0.00 4.40
1773 3764 0.685660 AAGTTGGAGAGAACCGGGAC 59.314 55.000 6.32 0.00 0.00 4.46
1774 3765 1.430992 AAAGTTGGAGAGAACCGGGA 58.569 50.000 6.32 0.00 0.00 5.14
1775 3766 2.271944 AAAAGTTGGAGAGAACCGGG 57.728 50.000 6.32 0.00 0.00 5.73
1792 3783 4.525487 AGCAGAGGCATTCAGATTCAAAAA 59.475 37.500 0.00 0.00 44.61 1.94
1793 3784 4.084287 AGCAGAGGCATTCAGATTCAAAA 58.916 39.130 0.00 0.00 44.61 2.44
1794 3785 3.693807 AGCAGAGGCATTCAGATTCAAA 58.306 40.909 0.00 0.00 44.61 2.69
1795 3786 3.361281 AGCAGAGGCATTCAGATTCAA 57.639 42.857 0.00 0.00 44.61 2.69
1796 3787 4.162888 TCTTAGCAGAGGCATTCAGATTCA 59.837 41.667 0.00 0.00 44.61 2.57
1797 3788 4.701765 TCTTAGCAGAGGCATTCAGATTC 58.298 43.478 0.00 0.00 44.61 2.52
1798 3789 4.706035 CTCTTAGCAGAGGCATTCAGATT 58.294 43.478 0.00 0.00 42.84 2.40
1799 3790 4.339872 CTCTTAGCAGAGGCATTCAGAT 57.660 45.455 0.00 0.00 42.84 2.90
1800 3791 3.815856 CTCTTAGCAGAGGCATTCAGA 57.184 47.619 0.00 0.00 42.84 3.27
1810 3801 5.183331 ACACATCGAGTAAACTCTTAGCAGA 59.817 40.000 8.41 0.00 40.75 4.26
1811 3802 5.403246 ACACATCGAGTAAACTCTTAGCAG 58.597 41.667 8.41 0.00 40.75 4.24
1812 3803 5.183331 AGACACATCGAGTAAACTCTTAGCA 59.817 40.000 8.41 0.00 40.75 3.49
1813 3804 5.513495 CAGACACATCGAGTAAACTCTTAGC 59.487 44.000 8.41 0.00 40.75 3.09
1814 3805 5.513495 GCAGACACATCGAGTAAACTCTTAG 59.487 44.000 8.41 0.90 40.75 2.18
1815 3806 5.048294 TGCAGACACATCGAGTAAACTCTTA 60.048 40.000 8.41 0.00 40.75 2.10
1816 3807 4.238514 GCAGACACATCGAGTAAACTCTT 58.761 43.478 8.41 0.00 40.75 2.85
1817 3808 3.255888 TGCAGACACATCGAGTAAACTCT 59.744 43.478 8.41 0.00 40.75 3.24
1818 3809 3.575630 TGCAGACACATCGAGTAAACTC 58.424 45.455 0.00 0.00 39.55 3.01
1819 3810 3.660501 TGCAGACACATCGAGTAAACT 57.339 42.857 0.00 0.00 0.00 2.66
1820 3811 6.414079 CAATATGCAGACACATCGAGTAAAC 58.586 40.000 0.00 0.00 0.00 2.01
1821 3812 5.523552 CCAATATGCAGACACATCGAGTAAA 59.476 40.000 0.00 0.00 0.00 2.01
1822 3813 5.049828 CCAATATGCAGACACATCGAGTAA 58.950 41.667 0.00 0.00 0.00 2.24
1823 3814 4.620982 CCAATATGCAGACACATCGAGTA 58.379 43.478 0.00 0.00 0.00 2.59
1824 3815 3.461061 CCAATATGCAGACACATCGAGT 58.539 45.455 0.00 0.00 0.00 4.18
1825 3816 2.222678 GCCAATATGCAGACACATCGAG 59.777 50.000 0.00 0.00 0.00 4.04
1826 3817 2.212652 GCCAATATGCAGACACATCGA 58.787 47.619 0.00 0.00 0.00 3.59
1827 3818 1.265095 GGCCAATATGCAGACACATCG 59.735 52.381 0.00 0.00 0.00 3.84
1828 3819 1.265095 CGGCCAATATGCAGACACATC 59.735 52.381 2.24 0.00 0.00 3.06
1829 3820 1.311859 CGGCCAATATGCAGACACAT 58.688 50.000 2.24 0.00 0.00 3.21
1830 3821 0.747644 CCGGCCAATATGCAGACACA 60.748 55.000 2.24 0.00 0.00 3.72
1831 3822 0.463654 TCCGGCCAATATGCAGACAC 60.464 55.000 2.24 0.00 0.00 3.67
1832 3823 0.254462 TTCCGGCCAATATGCAGACA 59.746 50.000 2.24 0.00 0.00 3.41
1833 3824 0.947244 CTTCCGGCCAATATGCAGAC 59.053 55.000 2.24 0.00 0.00 3.51
1834 3825 0.836606 TCTTCCGGCCAATATGCAGA 59.163 50.000 2.24 0.00 0.00 4.26
1835 3826 1.334869 GTTCTTCCGGCCAATATGCAG 59.665 52.381 2.24 0.00 0.00 4.41
1836 3827 1.340502 TGTTCTTCCGGCCAATATGCA 60.341 47.619 2.24 0.00 0.00 3.96
1837 3828 1.388547 TGTTCTTCCGGCCAATATGC 58.611 50.000 2.24 0.00 0.00 3.14
1838 3829 4.654091 ATTTGTTCTTCCGGCCAATATG 57.346 40.909 2.24 0.00 0.00 1.78
1839 3830 6.682861 GCTTAATTTGTTCTTCCGGCCAATAT 60.683 38.462 2.24 0.00 0.00 1.28
1840 3831 5.393678 GCTTAATTTGTTCTTCCGGCCAATA 60.394 40.000 2.24 0.00 0.00 1.90
1841 3832 4.620567 GCTTAATTTGTTCTTCCGGCCAAT 60.621 41.667 2.24 0.00 0.00 3.16
1842 3833 3.305744 GCTTAATTTGTTCTTCCGGCCAA 60.306 43.478 2.24 0.00 0.00 4.52
1843 3834 2.230266 GCTTAATTTGTTCTTCCGGCCA 59.770 45.455 2.24 0.00 0.00 5.36
1844 3835 2.230266 TGCTTAATTTGTTCTTCCGGCC 59.770 45.455 0.00 0.00 0.00 6.13
1845 3836 3.190535 TCTGCTTAATTTGTTCTTCCGGC 59.809 43.478 0.00 0.00 0.00 6.13
1846 3837 5.371115 TTCTGCTTAATTTGTTCTTCCGG 57.629 39.130 0.00 0.00 0.00 5.14
1847 3838 7.647715 TCTTTTTCTGCTTAATTTGTTCTTCCG 59.352 33.333 0.00 0.00 0.00 4.30
1848 3839 8.871686 TCTTTTTCTGCTTAATTTGTTCTTCC 57.128 30.769 0.00 0.00 0.00 3.46
1851 3842 9.688592 CTCATCTTTTTCTGCTTAATTTGTTCT 57.311 29.630 0.00 0.00 0.00 3.01
1852 3843 9.468532 ACTCATCTTTTTCTGCTTAATTTGTTC 57.531 29.630 0.00 0.00 0.00 3.18
1853 3844 9.822185 AACTCATCTTTTTCTGCTTAATTTGTT 57.178 25.926 0.00 0.00 0.00 2.83
1856 3847 9.631452 GCTAACTCATCTTTTTCTGCTTAATTT 57.369 29.630 0.00 0.00 0.00 1.82
1857 3848 9.018582 AGCTAACTCATCTTTTTCTGCTTAATT 57.981 29.630 0.00 0.00 0.00 1.40
1858 3849 8.572855 AGCTAACTCATCTTTTTCTGCTTAAT 57.427 30.769 0.00 0.00 0.00 1.40
1859 3850 7.986085 AGCTAACTCATCTTTTTCTGCTTAA 57.014 32.000 0.00 0.00 0.00 1.85
1860 3851 7.278868 GCTAGCTAACTCATCTTTTTCTGCTTA 59.721 37.037 7.70 0.00 0.00 3.09
1861 3852 6.093357 GCTAGCTAACTCATCTTTTTCTGCTT 59.907 38.462 7.70 0.00 0.00 3.91
1862 3853 5.584251 GCTAGCTAACTCATCTTTTTCTGCT 59.416 40.000 7.70 0.00 0.00 4.24
1863 3854 5.584251 AGCTAGCTAACTCATCTTTTTCTGC 59.416 40.000 17.69 0.00 0.00 4.26
1864 3855 7.608308 AAGCTAGCTAACTCATCTTTTTCTG 57.392 36.000 19.70 0.00 0.00 3.02
1865 3856 7.880195 TGAAAGCTAGCTAACTCATCTTTTTCT 59.120 33.333 19.70 0.00 0.00 2.52
1866 3857 8.034058 TGAAAGCTAGCTAACTCATCTTTTTC 57.966 34.615 19.70 13.34 0.00 2.29
1867 3858 7.986085 TGAAAGCTAGCTAACTCATCTTTTT 57.014 32.000 19.70 3.39 0.00 1.94
1868 3859 7.281999 GGATGAAAGCTAGCTAACTCATCTTTT 59.718 37.037 34.90 20.33 37.18 2.27
1869 3860 6.765512 GGATGAAAGCTAGCTAACTCATCTTT 59.234 38.462 34.90 20.86 37.18 2.52
1870 3861 6.099557 AGGATGAAAGCTAGCTAACTCATCTT 59.900 38.462 34.90 30.98 37.18 2.40
1871 3862 5.602145 AGGATGAAAGCTAGCTAACTCATCT 59.398 40.000 34.90 26.54 37.18 2.90
1872 3863 5.695816 CAGGATGAAAGCTAGCTAACTCATC 59.304 44.000 32.33 32.33 39.69 2.92
1873 3864 5.365025 TCAGGATGAAAGCTAGCTAACTCAT 59.635 40.000 25.55 25.55 45.97 2.90
1874 3865 4.711846 TCAGGATGAAAGCTAGCTAACTCA 59.288 41.667 19.70 20.09 45.97 3.41
1875 3866 5.269505 TCAGGATGAAAGCTAGCTAACTC 57.730 43.478 19.70 15.15 45.97 3.01
1890 3881 3.029570 TCCTCTCACAGACATCAGGATG 58.970 50.000 7.70 7.70 44.15 3.51
1891 3882 3.030291 GTCCTCTCACAGACATCAGGAT 58.970 50.000 0.00 0.00 33.08 3.24
1892 3883 2.451490 GTCCTCTCACAGACATCAGGA 58.549 52.381 0.00 0.00 33.08 3.86
1893 3884 1.133982 CGTCCTCTCACAGACATCAGG 59.866 57.143 0.00 0.00 33.08 3.86
1894 3885 2.087646 TCGTCCTCTCACAGACATCAG 58.912 52.381 0.00 0.00 33.08 2.90
1895 3886 2.087646 CTCGTCCTCTCACAGACATCA 58.912 52.381 0.00 0.00 33.08 3.07
1896 3887 2.088423 ACTCGTCCTCTCACAGACATC 58.912 52.381 0.00 0.00 33.08 3.06
1897 3888 2.088423 GACTCGTCCTCTCACAGACAT 58.912 52.381 0.00 0.00 33.08 3.06
1898 3889 1.072489 AGACTCGTCCTCTCACAGACA 59.928 52.381 0.00 0.00 33.08 3.41
1899 3890 1.735571 GAGACTCGTCCTCTCACAGAC 59.264 57.143 0.00 0.00 35.21 3.51
1900 3891 1.339247 GGAGACTCGTCCTCTCACAGA 60.339 57.143 0.00 0.00 36.61 3.41
1901 3892 1.091537 GGAGACTCGTCCTCTCACAG 58.908 60.000 0.00 0.00 36.61 3.66
1902 3893 0.693622 AGGAGACTCGTCCTCTCACA 59.306 55.000 0.00 0.00 44.25 3.58
1903 3894 1.091537 CAGGAGACTCGTCCTCTCAC 58.908 60.000 0.00 0.84 44.25 3.51
1904 3895 0.678366 GCAGGAGACTCGTCCTCTCA 60.678 60.000 0.00 0.00 44.25 3.27
1905 3896 0.678366 TGCAGGAGACTCGTCCTCTC 60.678 60.000 0.00 0.00 44.25 3.20
1906 3897 0.033601 ATGCAGGAGACTCGTCCTCT 60.034 55.000 0.00 0.00 44.25 3.69
1907 3898 0.102120 CATGCAGGAGACTCGTCCTC 59.898 60.000 0.00 0.00 44.25 3.71
1909 3900 1.520342 GCATGCAGGAGACTCGTCC 60.520 63.158 14.21 0.00 40.21 4.79
1910 3901 0.179089 ATGCATGCAGGAGACTCGTC 60.179 55.000 26.69 0.00 40.21 4.20
1911 3902 1.068281 CTATGCATGCAGGAGACTCGT 59.932 52.381 26.69 8.22 40.21 4.18
1912 3903 1.068281 ACTATGCATGCAGGAGACTCG 59.932 52.381 29.58 11.79 40.21 4.18
1913 3904 2.364970 AGACTATGCATGCAGGAGACTC 59.635 50.000 29.58 20.38 40.21 3.36
1914 3905 2.396608 AGACTATGCATGCAGGAGACT 58.603 47.619 29.58 26.02 46.44 3.24
1915 3906 2.871022 CAAGACTATGCATGCAGGAGAC 59.129 50.000 29.58 24.65 0.00 3.36
1916 3907 2.158856 CCAAGACTATGCATGCAGGAGA 60.159 50.000 29.58 14.50 0.00 3.71
1917 3908 2.219458 CCAAGACTATGCATGCAGGAG 58.781 52.381 26.69 25.11 0.00 3.69
1918 3909 1.748244 GCCAAGACTATGCATGCAGGA 60.748 52.381 26.69 15.24 0.00 3.86
1919 3910 0.666913 GCCAAGACTATGCATGCAGG 59.333 55.000 26.69 21.78 0.00 4.85
1920 3911 1.676746 AGCCAAGACTATGCATGCAG 58.323 50.000 26.69 15.79 0.00 4.41
1921 3912 1.746787 CAAGCCAAGACTATGCATGCA 59.253 47.619 25.04 25.04 0.00 3.96
1922 3913 1.066605 CCAAGCCAAGACTATGCATGC 59.933 52.381 11.82 11.82 0.00 4.06
1923 3914 1.066605 GCCAAGCCAAGACTATGCATG 59.933 52.381 10.16 1.82 0.00 4.06
1924 3915 1.064166 AGCCAAGCCAAGACTATGCAT 60.064 47.619 3.79 3.79 0.00 3.96
1925 3916 0.329261 AGCCAAGCCAAGACTATGCA 59.671 50.000 0.00 0.00 0.00 3.96
1926 3917 0.737219 CAGCCAAGCCAAGACTATGC 59.263 55.000 0.00 0.00 0.00 3.14
1927 3918 0.737219 GCAGCCAAGCCAAGACTATG 59.263 55.000 0.00 0.00 0.00 2.23
1928 3919 3.181526 GCAGCCAAGCCAAGACTAT 57.818 52.632 0.00 0.00 0.00 2.12
1929 3920 4.722193 GCAGCCAAGCCAAGACTA 57.278 55.556 0.00 0.00 0.00 2.59
1937 3928 0.607489 TCTTCTTCAGGCAGCCAAGC 60.607 55.000 15.80 0.00 0.00 4.01
1938 3929 2.125773 ATCTTCTTCAGGCAGCCAAG 57.874 50.000 15.80 9.81 0.00 3.61
1939 3930 2.592102 AATCTTCTTCAGGCAGCCAA 57.408 45.000 15.80 0.00 0.00 4.52
1940 3931 2.592102 AAATCTTCTTCAGGCAGCCA 57.408 45.000 15.80 0.00 0.00 4.75
1941 3932 3.949842 AAAAATCTTCTTCAGGCAGCC 57.050 42.857 1.84 1.84 0.00 4.85
2176 4169 9.438291 CATGTAAAAGAGTGTTCTTGTAGTTTG 57.562 33.333 0.00 0.00 42.80 2.93
2185 4178 6.601613 TGTTGAACCATGTAAAAGAGTGTTCT 59.398 34.615 0.00 0.00 34.29 3.01
2234 4229 7.386573 ACAGAATATACGTGACATGTGTTTGAA 59.613 33.333 1.15 0.00 0.00 2.69
2356 4352 7.522374 GTGCAAACACTTTTTGGAACATAAAA 58.478 30.769 0.00 0.00 43.85 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.